BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14500
(938 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|399020377|ref|ZP_10722510.1| ATP-dependent chaperone ClpB [Herbaspirillum sp. CF444]
gi|398095138|gb|EJL85485.1| ATP-dependent chaperone ClpB [Herbaspirillum sp. CF444]
Length = 863
Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/660 (71%), Positives = 587/660 (88%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARNGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI++GEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LKEI+ ++ I+FIDEL
Sbjct: 221 QRIVSGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKI+V+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 341 PSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI++EI KLE +YA+LE+
Sbjct: 401 IKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLTLIEEEIVKLEREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ SQ +KEEIE++RL++++ATRKSDWQ VS+LKYG+L +LE+ L+ +S++D
Sbjct: 461 IWKSEKATVQGSQHLKEEIERIRLQMDEATRKSDWQKVSELKYGKLAELEKALETQSKQD 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
N +K L++T+VG+EEIAEIV+R TGIPVS+++Q EREKLL++E +L +RVVGQD
Sbjct: 521 AASEQNVSKPRLVRTQVGAEEIAEIVARATGIPVSRMMQGEREKLLHMEEVLHQRVVGQD 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCK L++ +F+ EE++IRIDM
Sbjct: 581 EAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 641 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME D ++K+AVM EV+++FRPEFIN
Sbjct: 701 DDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQAMEDSDPAVVKMAVMAEVRLHFRPEFIN 760
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
R+D+I+VF L+ KNI +IA IQL+IL+ +L +M++ L IS A L+KI+ GFD +YGAR
Sbjct: 761 RVDEIVVFHALDEKNIGAIAKIQLHILEERLARMDIGLVISDAGLQKIAEAGFDPVYGAR 820
>gi|398835100|ref|ZP_10592480.1| ATP-dependent chaperone ClpB, partial [Herbaspirillum sp. YR522]
gi|398218198|gb|EJN04711.1| ATP-dependent chaperone ClpB, partial [Herbaspirillum sp. YR522]
Length = 794
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/667 (71%), Positives = 585/667 (87%), Gaps = 1/667 (0%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DE LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT
Sbjct: 85 DEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 144
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LKEI+ ++
Sbjct: 145 AIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKSVLKEIAQDEGQT 204
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRF
Sbjct: 205 IVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 264
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDL
Sbjct: 265 QKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDL 324
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEAAAKIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI++EI +L+
Sbjct: 325 IDEAAAKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQLIEEEIARLDR 384
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+YA+LE+IWK EK+ + QQ++EEIEK+R+++ +ATRKSDWQ VS+LKYG+L +LE L
Sbjct: 385 EYADLEEIWKAEKSTAQGGQQLREEIEKLRIQMEEATRKSDWQKVSELKYGKLAELEAAL 444
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+ +++KD K L++T+VG+EEIAEIV+R TGIPVS+++Q EREKLL++E +L
Sbjct: 445 EVQNKKDA-AGVTGEKPRLVRTQVGAEEIAEIVARATGIPVSRMMQGEREKLLHMEEVLH 503
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+RVVGQDEAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCKTL++ +F+ EE
Sbjct: 504 ERVVGQDEAIIAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKTLASYLFDTEE 563
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+IIRIDMSEF+EKHS++RLIGAPPGY+GYEEGG+LTE VRRKPYS+ILLDEIEKA+ DVF
Sbjct: 564 AIIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGHLTEAVRRKPYSVILLDEIEKAHPDVF 623
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
N+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME D ++KLAVM EV+ +
Sbjct: 624 NVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEGSDPALVKLAVMAEVRTH 683
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+++VF L+ KNI +IA IQL IL+ +L ++ + L+IS AAL+KI+ GF
Sbjct: 684 FRPEFINRVDELVVFHALDEKNIGAIARIQLRILEQRLARLEIGLEISDAALQKIAEAGF 743
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 744 DPVYGAR 750
>gi|340787492|ref|YP_004752957.1| ClpB protein [Collimonas fungivorans Ter331]
gi|340552759|gb|AEK62134.1| ClpB protein [Collimonas fungivorans Ter331]
Length = 867
Score = 1001 bits (2587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/663 (71%), Positives = 583/663 (87%), Gaps = 3/663 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP+SL SK++L LD+A LLAG K+RGEFE+RLK +LKEI+ ++ I+FIDEL
Sbjct: 221 QRIVNGEVPDSLKSKRVLSLDMAALLAGAKFRGEFEERLKAVLKEIAQDEGQTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 341 PSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE+MDKL+RRLIQLKIE EA++RE DE+S+KR LI++EI KL +YA+LE+
Sbjct: 401 IKIEIDSKPEVMDKLDRRLIQLKIEREAVRREKDEASQKRFSLIEEEIEKLSREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + S+ +KEEIEK+RL+I++ATR SDWQ VS+LKYG+LN+LE+ L+ +S++D
Sbjct: 461 IWKSEKASAQGSKHLKEEIEKLRLQIDEATRNSDWQKVSELKYGKLNELEKALETQSRQD 520
Query: 374 ---IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVV 430
P+ + L++T+VG++EIAEIVSR TGIPVSK++Q ER+KL+ +E+ L KRVV
Sbjct: 521 ALAAAHPDPDGRPQLVRTQVGADEIAEIVSRATGIPVSKMLQGERDKLVKMEDELHKRVV 580
Query: 431 GQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIR 490
GQ+EAI AVS+AIRRSR+GLSD RPYGSFMFLGPTGVGKTELCK L+ +F++ +++IR
Sbjct: 581 GQNEAIVAVSDAIRRSRAGLSDPDRPYGSFMFLGPTGVGKTELCKALAGFLFDSTDALIR 640
Query: 491 IDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILL 550
IDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRRKPYS+ILLDEIEKA+ DVFN+LL
Sbjct: 641 IDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRKPYSVILLDEIEKAHPDVFNVLL 700
Query: 551 QILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPE 610
Q+LDDGR+TD +GRT++F+NT+IVMTSNLGS +I+ ME D ++K+ VM EV+ +FRPE
Sbjct: 701 QVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHRIQAMEGSDPAVVKMEVMAEVRNHFRPE 760
Query: 611 FINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIY 670
FINRID+I+VF L+ KNI SIA IQL IL+ +L KM+M L IS+A L+KI+ GFD +Y
Sbjct: 761 FINRIDEIVVFHALDEKNIGSIAKIQLKILEQRLAKMDMGLVISEAGLQKIAEAGFDPVY 820
Query: 671 GAR 673
GAR
Sbjct: 821 GAR 823
>gi|409405922|ref|ZP_11254384.1| ATP-dependent Clp protease subunit [Herbaspirillum sp. GW103]
gi|386434471|gb|EIJ47296.1| ATP-dependent Clp protease subunit [Herbaspirillum sp. GW103]
Length = 862
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/667 (71%), Positives = 586/667 (87%), Gaps = 1/667 (0%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DE LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT
Sbjct: 154 DEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 213
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LKEI+ ++
Sbjct: 214 AIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLKEIAQDEGQT 273
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRF
Sbjct: 274 IVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDL
Sbjct: 334 QKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDL 393
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI++EI KLE
Sbjct: 394 IDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQLIEEEIEKLER 453
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+YA+LE+IWK EK+ + QQ+KEEIEKVRL++ +ATRKSDWQ VS+LKYG+L +LE L
Sbjct: 454 EYADLEEIWKAEKSTAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSELKYGKLAELEAAL 513
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+ +++KD N K L++T+VG+EEIAEIV+R TGIPVS+++Q EREKLL++E++L
Sbjct: 514 EVQNKKDAAGVKN-EKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREKLLHMEDVLH 572
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+RVVGQDEAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCK L++ +F+ EE
Sbjct: 573 ERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKALASYLFDTEE 632
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVF
Sbjct: 633 AMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVF 692
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
N+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME D ++KLAVM EV+ +
Sbjct: 693 NVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTH 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+I+VF L+ KNI +IA IQL IL+ +L K+ + L+IS+A L+KI+ GF
Sbjct: 753 FRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLEISEAGLQKIAEAGF 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|300311426|ref|YP_003775518.1| ATP-dependent Clp protease subunit [Herbaspirillum seropedicae
SmR1]
gi|300074211|gb|ADJ63610.1| ATP-dependent Clp protease subunit (heat-shock) protein
[Herbaspirillum seropedicae SmR1]
Length = 861
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/667 (71%), Positives = 585/667 (87%), Gaps = 1/667 (0%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DE LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT
Sbjct: 154 DEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 213
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LKEI+ ++
Sbjct: 214 AIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLKEIAQDEGQT 273
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRF
Sbjct: 274 IVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDL
Sbjct: 334 QKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDL 393
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI++EI KLE
Sbjct: 394 IDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQLIEEEIEKLER 453
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+YA+LE+IWK EK+ + QQ+KEEIEKVRL++ +ATRKSDWQ VS+LKYG+L +LE L
Sbjct: 454 EYADLEEIWKAEKSSAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSELKYGKLAELEAAL 513
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+ +++KD K L++T+VG+EEIAEIV+R TGIPVS+++Q EREKLL++E++L
Sbjct: 514 EVQNKKDA-AGVKTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREKLLHMEDVLH 572
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+RVVGQDEAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCK L++ +F+ EE
Sbjct: 573 ERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKALASYLFDTEE 632
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVF
Sbjct: 633 AMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVF 692
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
N+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME D ++KLAVM EV+ +
Sbjct: 693 NVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTH 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+I+VF L+ KNI +IA IQL IL+ +L K+ + L+IS+A L+KI+ GF
Sbjct: 753 FRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLEISEAGLQKIAEAGF 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|329912608|ref|ZP_08275778.1| ClpB protein [Oxalobacteraceae bacterium IMCC9480]
gi|327545580|gb|EGF30751.1| ClpB protein [Oxalobacteraceae bacterium IMCC9480]
Length = 867
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/660 (70%), Positives = 582/660 (88%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LAKYTIDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP+SL SK++L LD+A L+AG KYRGEFE+RLK +LK+++ ++ I+FIDEL
Sbjct: 221 QRIVNGEVPDSLKSKRVLSLDMAALVAGAKYRGEFEERLKAVLKDLAKDEGQTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 341 PSVEATIAILRGLQERYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+KIEIDS+PE+MDKL+RR IQLKIE EAIK+E DE+S++RL LI++EI + E +YA+LE+
Sbjct: 401 VKIEIDSRPEVMDKLDRRTIQLKIEREAIKKEKDEASQRRLALIEEEILRSEREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ SQ IKEEIE+VRL++++ATRKSDW+TVS+L+YG+L +LE+ L+ +S++D
Sbjct: 461 IWRAEKAAVQGSQHIKEEIEEVRLQMDEATRKSDWKTVSELQYGKLPELEKALEAQSRQD 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q K LL+T+VG+EEIAEIVSR TGIPVSK++Q ER+KL+++E+ L +RV+GQ
Sbjct: 521 EQADKANTKPRLLRTQVGAEEIAEIVSRATGIPVSKMMQGERDKLVHMEDFLHQRVIGQH 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVS+AIRRSR+GLSD RPYGSFMFLGPTGVGKTELCK L+ +F+ EES+IRIDM
Sbjct: 581 EAIVAVSDAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTELCKALAGFLFDTEESMIRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GY+EGG+LTE VRR+PYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 641 SEFMEKHSVARLIGAPPGYVGYDEGGFLTEAVRRRPYSVILLDEVEKAHQDVFNVLLQVL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME+ + ++K+AVM EV+ +FRPEFIN
Sbjct: 701 DDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQAMEESEPAVVKMAVMAEVRQHFRPEFIN 760
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I+VF L+ K+I +IA IQL IL+ +L KM M L I+ AAL+KI+ GFD +YGAR
Sbjct: 761 RIDEIVVFHALDEKHIGAIARIQLKILEQRLGKMEMRLDITDAALQKIAEAGFDPVYGAR 820
>gi|415902608|ref|ZP_11552111.1| Heat-shock protein, ATP-dependent Clp protease subunit
[Herbaspirillum frisingense GSF30]
gi|407763849|gb|EKF72441.1| Heat-shock protein, ATP-dependent Clp protease subunit
[Herbaspirillum frisingense GSF30]
Length = 852
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/667 (71%), Positives = 585/667 (87%), Gaps = 1/667 (0%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DE LKK+T+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT
Sbjct: 145 DEGQREALKKFTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 204
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LKEI+ ++
Sbjct: 205 AIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLKEIAQDEGQT 264
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRF
Sbjct: 265 IVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 324
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDL
Sbjct: 325 QKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDL 384
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI++EI KLE
Sbjct: 385 IDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQLIEEEIEKLER 444
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+YA+LE+IWK EK+ + QQ+KEEIEKVRL++ +ATRKSDWQ VS+LKYG+L +LE L
Sbjct: 445 EYADLEEIWKAEKSTAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSELKYGKLAELEAAL 504
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+ +++KD K L++T+VG+EEIAEIV+R TGIPVS+++Q EREKLL++E++L
Sbjct: 505 EVQNKKDA-AGATTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREKLLHMEDVLH 563
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+RVVGQ+EAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCK L++ +F+ EE
Sbjct: 564 ERVVGQEEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKALASYLFDTEE 623
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVF
Sbjct: 624 AMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVF 683
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
N+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS +I+ ME D ++KLAVM EV+ +
Sbjct: 684 NVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHRIQSMEDSDPALVKLAVMAEVRTH 743
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+I+VF L+ KNI +IA IQL IL+ +L K+ + L+IS+A L+KI+ GF
Sbjct: 744 FRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLQISEAGLQKIAEAGF 803
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 804 DPVYGAR 810
>gi|124483534|emb|CAM32640.1| ATP-dependent Clp protease subunit (heat-shock) protein
[Herbaspirillum seropedicae]
Length = 861
Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/667 (71%), Positives = 583/667 (87%), Gaps = 1/667 (0%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DE LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT
Sbjct: 154 DEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 213
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LKEI+ ++
Sbjct: 214 AIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLKEIAQDEGQT 273
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
I+FIDELHTM+G G EG++DAGNMLKP L+R ELHC+GATTL+EYRQYIEKDAA ERRF
Sbjct: 274 IVFIDELHTMVGAGYAEGAMDAGNMLKPALARAELHCVGATTLDEYRQYIEKDAALERRF 333
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDL
Sbjct: 334 QKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDL 393
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI++EI KLE
Sbjct: 394 IDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQLIEEEIEKLER 453
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+YA+LE+IWK EK+ + QQ+KEEIEKVRL++ +ATRKSDWQ VS+LKYG+L +LE L
Sbjct: 454 EYADLEEIWKAEKSSAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSELKYGKLAELEAAL 513
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+ +++KD K L++T+VG+EEIAEIV+R TGIPVS+++Q EREKLL++E++L
Sbjct: 514 EVQNKKDA-AGVKTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREKLLHMEDVLH 572
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+RVVGQDEAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCK L++ +F+ EE
Sbjct: 573 ERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKALASYLFDTEE 632
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVF
Sbjct: 633 AMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVF 692
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
N+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME D ++KLAVM EV+ +
Sbjct: 693 NVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTH 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+I+VF L+ KNI +IA IQL IL+ +L K+ + L+IS+A L+KI+ GF
Sbjct: 753 FRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLEISEAGLQKIAEAGF 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|152979798|ref|YP_001353008.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Janthinobacterium sp. Marseille]
gi|151279875|gb|ABR88285.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Janthinobacterium sp. Marseille]
Length = 859
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/660 (69%), Positives = 572/660 (86%), Gaps = 4/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR+GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARIGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP+SL K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPDSLKGKRVLSLDMASLLAGAKYRGEFEERLKAVLTELAEDEGQTIVFIDEM 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKI+V E
Sbjct: 281 HTLVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA+K
Sbjct: 341 PTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASK 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MDKL+RR+IQLKIE EAIK+E DE+S+KRL LI++EI +L +YA+LE+
Sbjct: 401 IKIELDSKPEVMDKLDRRVIQLKIEREAIKKEKDEASQKRLALIEEEIERLGREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK+ + SQ IKEEIEKVRL++ +ATRKSDWQ VS+L+Y L +LE LK + +
Sbjct: 461 IWKAEKSSAQGSQHIKEEIEKVRLQMEEATRKSDWQRVSELQYSTLPQLEAQLKNAVKGE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ +A K L++T+VG+EEIAE+VSR TGIPVS+++ EREKLL +E+ L KRVVGQ
Sbjct: 521 V----SAGKPQLVRTQVGAEEIAEVVSRATGIPVSRMMTGEREKLLQMEDALHKRVVGQH 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVS+AIRRSR+GL D RPYGSFMFLGPTGVGKTELCK L++ +F+ E+S+IRIDM
Sbjct: 577 EAIVAVSDAIRRSRAGLGDPDRPYGSFMFLGPTGVGKTELCKALASFMFDTEDSLIRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY +ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVILLDEIEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME + +IK+AVM EV+ +FRPEFIN
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEGNEPALIKMAVMAEVQGHFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I+ F L+ KNI SIA IQL +L+ +L +M+M + +S+ AL+KI+ GFD +YGAR
Sbjct: 757 RIDEIVAFHALDEKNIGSIAKIQLQVLEKRLARMDMSMDVSEDALQKIAEAGFDPVYGAR 816
>gi|253995931|ref|YP_003047995.1| ATP-dependent chaperone ClpB [Methylotenera mobilis JLW8]
gi|253982610|gb|ACT47468.1| ATP-dependent chaperone ClpB [Methylotenera mobilis JLW8]
Length = 863
Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/709 (65%), Positives = 587/709 (82%), Gaps = 12/709 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL KK+L LD+A LLAG KYRGEFE+RLK +LKE++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPESLKGKKVLSLDMAALLAGAKYRGEFEERLKSVLKELAQDEGQTIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKLERRLIQLKIE EA++RE DE SKKR LI+ EI+KLE +YA+LE+
Sbjct: 401 IKMEIDSKPEVMDKLERRLIQLKIEREAVRREKDEGSKKRFELIEDEISKLEKEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ S IKE IEKV+ ++ +ATRK DWQ VS+L+YG+L +LE LK+ S +
Sbjct: 461 IWKSEKAQVQGSAHIKEAIEKVKFEMEEATRKGDWQKVSELQYGKLPQLETQLKQASTAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + + +K +L+T+VG++EIAE+VSR TGIPVSK++ EREKLL +E L +RVVGQD
Sbjct: 521 VSV--DLSKHKMLRTEVGADEIAEVVSRATGIPVSKMMTGEREKLLTMEAKLHERVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSRSGL D RPYGSF+FLGPTGVGKTELCK+L+ +F++EE +IRIDM
Sbjct: 579 EAVRLVSDAIRRSRSGLGDPNRPYGSFLFLGPTGVGKTELCKSLANFLFDSEEHLIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++R+IGAPPGY+GYEEGG LTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARMIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+I+MTSNLGS I+ M D +++KLAVM EVK +FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMSDQDYQLVKLAVMGEVKTHFRPEFVN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L +NI SIA IQL L +L M+M L+++ AA+ +I+N GFD +YGAR
Sbjct: 759 RIDEVVVFHALGEENIKSIAAIQLQYLAKRLAAMDMQLELTDAAIAEIANAGFDPVYGAR 818
Query: 674 DVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTL--RMVYS 720
+ +S ++P A I G+ I K +D ++V+S
Sbjct: 819 PLKRAIQS--------EIENPLAREILAGNFIAKDTVKIDVRAGKLVFS 859
>gi|82702670|ref|YP_412236.1| ATPase with chaperone activity [Nitrosospira multiformis ATCC
25196]
gi|82410735|gb|ABB74844.1| ATPase with chaperone activity [Nitrosospira multiformis ATCC
25196]
Length = 869
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/660 (68%), Positives = 569/660 (86%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARAGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L KK+L LD+A LLAG KYRGEFE+RLK +LKEI+ +I+FIDEL
Sbjct: 221 QRIVNGEVPETLKDKKVLSLDMAALLAGAKYRGEFEERLKSVLKEIAQAGGSVIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+ VEE
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVFVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PTVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL L++ EI KLE +YA+LE+
Sbjct: 401 IRMEIDSKPEAMDRLDRRLIQLKIEREAVKKEKDEASQKRLALLEDEIAKLEREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK+ ++ +Q IKEE+EKV+L+I ATRK DWQ VS+L+YG L +LE L+ + ++
Sbjct: 461 IWKAEKSQVQGTQHIKEEMEKVKLEIEAATRKGDWQKVSELQYGRLPQLEAQLQMQDRQA 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL++E L +RVVGQD
Sbjct: 521 EKETVEQNKPKLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLHMEEKLHERVVGQD 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELC+ L+ +F++EE +IRIDM
Sbjct: 581 EAVRLVSDAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCRALAGFLFDSEEHMIRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY++ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 641 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYAVILLDEVEKAHPDVFNVLLQVL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKLAVM EVK YFRPEFIN
Sbjct: 701 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGDDYQVIKLAVMGEVKAYFRPEFIN 760
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ K+I SIA IQL L+ +L K+ M LK++ AAL +++ GFD ++GAR
Sbjct: 761 RIDEVVVFHALDEKHIKSIARIQLQQLERRLAKLEMHLKVTDAALAEVAQAGFDPVFGAR 820
>gi|134095329|ref|YP_001100404.1| ATP-dependent protease Hsp 100 [Herminiimonas arsenicoxydans]
gi|133739232|emb|CAL62281.1| Chaperone protein ClpB [Herminiimonas arsenicoxydans]
Length = 860
Score = 976 bits (2524), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/660 (69%), Positives = 569/660 (86%), Gaps = 4/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR+GKLDPVIGRDDEIRR IQ+LQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTMDLTERARIGKLDPVIGRDDEIRRTIQILQRRSKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPESLKGKRVLSLDMASLLAGAKYRGEFEERLKAVLTELAEDEGQTIVFIDEM 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTLVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 341 PTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE+MD+L+RR+IQLKIE EAI++E DE+S+KRL LI++EI KL +YA+LE+
Sbjct: 401 IKIEIDSKPEVMDRLDRRVIQLKIEREAIRKEKDEASQKRLALIEEEIEKLGREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK+ + SQ IKE IEK RL++ +ATR+SDWQ VS+L+Y L +LE LK
Sbjct: 461 IWKAEKSAAQGSQHIKEAIEKARLQMEEATRQSDWQRVSELQYKTLPELEAQLKNA---- 516
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ +A K L++T+VG+EEIAE+VSR TGIPVS+++Q EREKLL +E+ L KRVVGQ
Sbjct: 517 VTGEASAGKPQLVRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLQMEDALHKRVVGQH 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVS+AIRRSR+GL D RPYGSFMFLGPTGVGKTELCK L++ +F+ E+S++RIDM
Sbjct: 577 EAIVAVSDAIRRSRAGLGDPDRPYGSFMFLGPTGVGKTELCKALASFLFDTEDSLVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY +ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVILLDEIEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME + +IK+AVM EV+ +FRPEFIN
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQAMEGNEPALIKMAVMAEVQSHFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I+VF L+ KNI +IA IQL+ L+ +L +M+M + +S+ AL+KI+ GFD +YGAR
Sbjct: 757 RIDEIVVFHALDEKNIGAIAKIQLHTLEQRLARMDMSMDVSEDALQKIAEAGFDPVYGAR 816
>gi|339482101|ref|YP_004693887.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. Is79A3]
gi|338804246|gb|AEJ00488.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. Is79A3]
Length = 871
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/665 (69%), Positives = 567/665 (85%), Gaps = 5/665 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP SL K++L LD+A LLAG KYRGEFE+RLK +LKE++ ++ I+FIDEL
Sbjct: 221 QRIINGEVPESLKDKRVLSLDMAALLAGAKYRGEFEERLKSVLKELAQDEGKTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE +DKL+RRLIQLKIE EAIK+E DE+S+KRL L+++EI + E +YA+L++
Sbjct: 401 IRMEIDSKPEALDKLDRRLIQLKIEREAIKKEKDEASQKRLQLLEEEIKQKEREYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK-----E 368
IWK EK ++ SQQIKEE+EK+RL+I ATRK DWQ VS+L+YG L +LE L+ +
Sbjct: 461 IWKTEKFHVQGSQQIKEEMEKIRLEIEAATRKGDWQKVSELQYGRLPQLEAQLQSQLNAQ 520
Query: 369 KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKR 428
K Q A LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E L R
Sbjct: 521 KQQTGATESGAAAAPKLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLLMEQKLHDR 580
Query: 429 VVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESI 488
VVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+ +F++E+ +
Sbjct: 581 VVGQDEAVRLVSDAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHL 640
Query: 489 IRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNI 548
IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTEIVRRKPY++ILLDE+EKA+ DVFN+
Sbjct: 641 IRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEIVRRKPYAVILLDEVEKAHPDVFNV 700
Query: 549 LLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFR 608
LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+EM + + IK AVM EVK +FR
Sbjct: 701 LLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQEMSGSEYQAIKEAVMGEVKTHFR 760
Query: 609 PEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDL 668
PEFINRID+++VF L+ K+I SIA IQL+ L+ +L K+ M L++S+AAL +S GFD
Sbjct: 761 PEFINRIDEVVVFHALDEKHIKSIARIQLHYLETRLAKLEMKLEVSEAALAALSQAGFDP 820
Query: 669 IYGAR 673
+YGAR
Sbjct: 821 VYGAR 825
>gi|394988952|ref|ZP_10381787.1| ATP-dependent chaperone ClpB [Sulfuricella denitrificans skB26]
gi|393792331|dbj|GAB71426.1| ATP-dependent chaperone ClpB [Sulfuricella denitrificans skB26]
Length = 870
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/660 (67%), Positives = 572/660 (86%), Gaps = 4/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+ARLGKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARLGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP +L K++L+LD+A LLAG KYRGEFE+RLK +LKE+ + +I+FIDEL
Sbjct: 221 QRIINGEVPETLKGKRVLVLDMAGLLAGAKYRGEFEERLKAVLKEVGQEEGQVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYVEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYE+HHGV+ITDPAI+AA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEDTIAILRGLQEKYELHHGVDITDPAIIAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RRLIQLKIE EA+K+E DE+SKKRL+L+ +EI KL+ +Y +LE+
Sbjct: 401 IRMEIDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASKKRLVLLDQEIVKLQREYNDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ SQ IKEE+++++++++ ATRK +WQ VS+++YG++ +LE LK D
Sbjct: 461 IWKAEKAQVQGSQHIKEELDRLKVEMDAATRKGEWQKVSEIQYGKIPQLEAQLKHADTAD 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+P + LL+T+VG+EEIAE+VSR TGIPVSK+++ ER+KLL++E+ L +RVVGQD
Sbjct: 521 EAMPAH----QLLRTQVGAEEIAEVVSRATGIPVSKMMEGERDKLLHMEDQLHQRVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GL D RPYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 577 EAVRLVSDAIRRSRAGLGDPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+E+HS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMERHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++ME D +++KLAVM EVK YFRPEFIN
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMEGDDYQVVKLAVMAEVKSYFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ +NI SIA IQL L +L M M L++S AAL +++ GFD ++GAR
Sbjct: 757 RIDEVVVFHALDEENIKSIAGIQLQYLTKRLAAMEMKLEVSDAALTELAAAGFDPVFGAR 816
>gi|119897857|ref|YP_933070.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Azoarcus sp.
BH72]
gi|119670270|emb|CAL94183.1| probable ATP-dependent Clp protease, ATP-binding subunit ClpB
[Azoarcus sp. BH72]
Length = 860
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/660 (68%), Positives = 566/660 (85%), Gaps = 4/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY +DLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYCLDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L KK+L LD+A LLAG KYRGEFE+RLK +LK+I+ ++ II+FIDE+
Sbjct: 221 QRIVNDEVPETLKGKKVLSLDMAALLAGAKYRGEFEERLKAVLKDIAQDEGRIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PTVESTIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKLERRLIQLKIE EA+KRE DE+S++RLLLI+ EI+KLE +YANL++
Sbjct: 401 IKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQRRLLLIRDEIDKLEREYANLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W+ EK ++ SQ IKEEIEK+R ++ + RK + +++L+YG+L +LE LK
Sbjct: 461 VWRSEKASVQGSQHIKEEIEKLRAQMAEMQRKGQFDKLAELQYGKLPQLEAQLKAAETAG 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ +F LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E L RVVGQD
Sbjct: 521 ----SGERQFKLLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEERLHGRVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCKTL+ +F++EE +IRIDM
Sbjct: 577 EAVRLVSDAIRRSRAGLADENRPYGSFLFLGPTGVGKTELCKTLAEFLFDSEEHLIRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL DE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKLAVM EVK +FRPEFIN
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKLAVMAEVKTFFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ KNI IA IQL L+ +L K++M +++S AAL +I++ GFD ++GAR
Sbjct: 757 RIDEVVVFHALDEKNIAGIARIQLKYLEKRLAKLDMSMEVSDAALAEIASAGFDPVFGAR 816
>gi|91776550|ref|YP_546306.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
gi|91710537|gb|ABE50465.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
Length = 861
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/660 (68%), Positives = 567/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKK+TIDLTE+ARLGKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKFTIDLTERARLGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L +K++L+LD+A LLAG KYRGEFE+RL+ +LKE++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLQAVLKELAQDEGKTIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE +DKLERRLIQLKIE EA+ RE DE+S+KRL LI+ EI +LE +YA+LE+
Sbjct: 401 IKMEIDSKPEALDKLERRLIQLKIEREAVHREKDEASQKRLSLIEDEIRRLEKEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ S+ +KEEIEKV+L+I +ATRK +WQ VS+L+YG+L +LE LK+ + +
Sbjct: 461 IWKAEKAQVQGSKHLKEEIEKVKLQIEEATRKGEWQKVSELQYGKLPQLETQLKQAASAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q ++ LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL++E L +RVVGQD
Sbjct: 521 EQGGQKPHR--LLRTQVGAEEIAEVVSRATGIPVSKMLQGERDKLLHMEEKLHERVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSRSGL+D RPYGSF+FLGPTGVGKTEL K L+ +F++E+ +IRIDM
Sbjct: 579 EAVRLVSDAIRRSRSGLADPNRPYGSFLFLGPTGVGKTELTKALAGFLFDSEDHLIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+I+MTSNLGS I+ M + +++KLAVM EVK FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQNMSGDEYQVVKLAVMAEVKANFRPEFVN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L ++ SIA IQL L +L M M L +S AAL +I+N GFD +YGAR
Sbjct: 759 RIDEVVVFHALGESHVKSIARIQLQNLAKRLAAMEMHLDVSDAALAEIANAGFDPVYGAR 818
>gi|56479246|ref|YP_160835.1| ClpB protein [Aromatoleum aromaticum EbN1]
gi|56315289|emb|CAI09934.1| ClpB protein [Aromatoleum aromaticum EbN1]
Length = 860
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/660 (68%), Positives = 564/660 (85%), Gaps = 4/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KY +DLT++AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LNKYCLDLTDRARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG KYRGEFE+RLK +LKEI+ + II+FIDEL
Sbjct: 221 QRIVNDEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLKEIAQEEGRIIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVESTIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKLERRLIQLKIE EA+KRE DE+S+KRL+LI+ EI+KLE +YANL++
Sbjct: 401 IKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQKRLVLIRDEIDKLEREYANLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ SQ IKEEIE +R ++ + RK + +++L+YG+L +LE LK
Sbjct: 461 IWRSEKASVQGSQHIKEEIEALRTQMAEMQRKGQYDKLAELQYGKLPQLEAQLKAAESAG 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ KF LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E L +RVVGQD
Sbjct: 521 ----SGERKFKLLRTEVGTEEIAEVVSRATGIPVSKMMQGEREKLLKMEERLHQRVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCKTL+ +F++EE +IRIDM
Sbjct: 577 EAVRLVADAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKTLAEFLFDSEEHLIRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL DE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKLAVM EVK YFRPEF+N
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGDDHQVIKLAVMAEVKTYFRPEFVN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ K+I SIA IQL L +L +++M +++S AAL ++++ GFD ++GAR
Sbjct: 757 RIDEVVVFHALDEKHIASIARIQLQYLDKRLARLDMSMEVSDAALAELASAGFDPVFGAR 816
>gi|291614661|ref|YP_003524818.1| ATP-dependent chaperone ClpB [Sideroxydans lithotrophicus ES-1]
gi|291584773|gb|ADE12431.1| ATP-dependent chaperone ClpB [Sideroxydans lithotrophicus ES-1]
Length = 861
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/660 (69%), Positives = 567/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY +DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYCMDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP +L K++L LD+A LLAG KYRGEFE+RLK +LKE+S ++ I+FIDEL
Sbjct: 221 QRIINGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLKELSQDEGKNIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVESTIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKL+RRLIQLKIE EA+K+E DE+S+KR+ LI+ EI KLE +YA+LE+
Sbjct: 401 IKMEIDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASRKRMGLIEDEIRKLEREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI+ V+ ++ R+ + V++L+YG+L +LE LKE +Q++
Sbjct: 461 IWKAEKGAAQGAANVKEEIDHVKAEMVALQREGKLEKVAELQYGKLPQLEAKLKEAAQRE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 521 AEGTGTRNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEDKLHERVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCKTL+ +F++E+ +IRIDM
Sbjct: 579 EAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKTLANFLFDSEDHLIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVF +LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFGVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++ME D +++KLAVM EVK YFRPEFIN
Sbjct: 699 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMEGDDYQVVKLAVMGEVKNYFRPEFIN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ KNI SIA IQL+ L+ +L M M L ++ AAL +I+N GFD +YGAR
Sbjct: 759 RIDEVVVFHALDEKNIKSIARIQLHGLEKRLAAMEMKLDVTDAALAEIANAGFDPVYGAR 818
>gi|297537752|ref|YP_003673521.1| ATP-dependent chaperone ClpB [Methylotenera versatilis 301]
gi|297257099|gb|ADI28944.1| ATP-dependent chaperone ClpB [Methylotenera versatilis 301]
Length = 863
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/660 (67%), Positives = 560/660 (84%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR+GKLDPVIGRDDEIRR IQ+L RR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARMGKLDPVIGRDDEIRRTIQILGRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP+SL KK+L LD+A LLAG KYRG+FE+RLK +LKE++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPDSLKGKKVLSLDMAALLAGAKYRGDFEERLKSVLKELAQDEGQTIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKLERR+IQLKIE EA++RE DE SKKR LI++E +LE +YA+LE
Sbjct: 401 IKMEIDSKPEVMDKLERRMIQLKIEREAVRREKDEGSKKRFNLIEEEFGRLEKEYADLED 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ S IKEEIEK++ ++ +ATRK +WQ VS+L+YG+L LE LK+ S
Sbjct: 461 IWKAEKAQVQGSAHIKEEIEKIKFEMEEATRKGEWQKVSELQYGKLPALEAQLKQASNS- 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + K +L+T+VG++EIAE+VSR TGIPVSK++Q ER KLL +E L +RVVGQD
Sbjct: 520 -EATSTQTKHKMLRTEVGADEIAEVVSRATGIPVSKMMQGERGKLLTMETKLHERVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSRSGL D RPYGSF+FLGPTGVGKTELCK L+ +F++E+ +IRIDM
Sbjct: 579 EAVRLVSDAIRRSRSGLGDPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++R+IGAPPGY+GYEEGG LTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARMIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+I+MTSNLGS I+ M D +++KLAVM EVK +FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMADQDYQVVKLAVMGEVKAHFRPEFVN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L NI +IA IQL L +L M+M L+++ AA+ +I+N GFD +YGAR
Sbjct: 759 RIDEVVVFHALGEDNIKAIAEIQLQYLAKRLAAMDMQLELTDAAITEIANAGFDPVYGAR 818
>gi|206560283|ref|YP_002231047.1| ClpB heat-shock protein [Burkholderia cenocepacia J2315]
gi|444358706|ref|ZP_21160085.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia BC7]
gi|444365745|ref|ZP_21165861.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia
K56-2Valvano]
gi|198036324|emb|CAR52220.1| ClpB heat-shock protein [Burkholderia cenocepacia J2315]
gi|443603407|gb|ELT71418.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia BC7]
gi|443605667|gb|ELT73504.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia
K56-2Valvano]
Length = 865
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/673 (67%), Positives = 575/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREKLL+
Sbjct: 508 QLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
AN DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK AV
Sbjct: 688 ANPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGSPQDEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 LEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPVFGAR 820
>gi|115351836|ref|YP_773675.1| ATPase [Burkholderia ambifaria AMMD]
gi|172060806|ref|YP_001808458.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MC40-6]
gi|115281824|gb|ABI87341.1| ATPase AAA-2 domain protein [Burkholderia ambifaria AMMD]
gi|171993323|gb|ACB64242.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MC40-6]
Length = 865
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/673 (67%), Positives = 575/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I++L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 IEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPVFGAR 820
>gi|107028974|ref|YP_626069.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]
gi|116689868|ref|YP_835491.1| ATPase [Burkholderia cenocepacia HI2424]
gi|105898138|gb|ABF81096.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]
gi|116647957|gb|ABK08598.1| ATPase AAA-2 domain protein [Burkholderia cenocepacia HI2424]
Length = 865
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/673 (67%), Positives = 576/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I++L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREKLL+
Sbjct: 508 QLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQDEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 LEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPVFGAR 820
>gi|413962472|ref|ZP_11401699.1| ATP-dependent chaperone ClpB [Burkholderia sp. SJ98]
gi|413928304|gb|EKS67592.1| ATP-dependent chaperone ClpB [Burkholderia sp. SJ98]
Length = 865
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/660 (68%), Positives = 567/660 (85%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLHDIAKDEGQTIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI++L +Y++LE+
Sbjct: 401 IKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEKDEASQKRLQLIEEEIDRLNREYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L +LE LK+ +Q +
Sbjct: 461 IWTAEKAAVQGSAQLKEEIEKVRADITRLQREGKLEKVAELQYGKLPELEARLKQVTQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q NN + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREKLL IE L +RV+GQD
Sbjct: 521 SQEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREKLLQIEAKLHERVIGQD 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+A +F++E+ +IRIDM
Sbjct: 581 EAIGAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAAFLFDSEDHLIRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 641 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV EVK++FRPEF+N
Sbjct: 701 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQGMVGEPQERVKDAVWEEVKLHFRPEFLN 760
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RIDD++VF L+R NI SIA IQL L +L K++MDL +S AAL +I +G+D ++GAR
Sbjct: 761 RIDDVVVFHALDRTNIESIAKIQLARLHERLAKLDMDLDVSDAALAQIGKVGYDPLFGAR 820
>gi|170703405|ref|ZP_02894181.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria IOP40-10]
gi|170131681|gb|EDT00233.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria IOP40-10]
Length = 865
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/673 (67%), Positives = 575/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I++L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 IEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPVFGAR 820
>gi|421866946|ref|ZP_16298608.1| ClpB protein [Burkholderia cenocepacia H111]
gi|358073110|emb|CCE49486.1| ClpB protein [Burkholderia cenocepacia H111]
Length = 865
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/673 (67%), Positives = 575/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREKLL+
Sbjct: 508 QLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGSPQDEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 LEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPVFGAR 820
>gi|170733207|ref|YP_001765154.1| ATP-dependent chaperone ClpB [Burkholderia cenocepacia MC0-3]
gi|169816449|gb|ACA91032.1| ATP-dependent chaperone ClpB [Burkholderia cenocepacia MC0-3]
Length = 865
Score = 959 bits (2479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/673 (67%), Positives = 576/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I++L +YA+LE+IW EK ++ S Q+KE+IEKVR I + R+ + V++L+YG+L
Sbjct: 448 IDRLGREYADLEEIWTAEKAAVQGSAQLKEDIEKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREKLL+
Sbjct: 508 QLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQDEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 LEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPVFGAR 820
>gi|254248039|ref|ZP_04941360.1| ATPase with chaperone activity, ATP-binding subunit [Burkholderia
cenocepacia PC184]
gi|124872815|gb|EAY64531.1| ATPase with chaperone activity, ATP-binding subunit [Burkholderia
cenocepacia PC184]
Length = 865
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/673 (67%), Positives = 576/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I++L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+L+ LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREKLL+
Sbjct: 508 QLDAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQDEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 LEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPVFGAR 820
>gi|330817193|ref|YP_004360898.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
gladioli BSR3]
gi|327369586|gb|AEA60942.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
gladioli BSR3]
Length = 865
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/673 (66%), Positives = 576/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSADAESQREALKKYTVDLTERARSGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK++V+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVIVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPESMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KE+I++VR +I K R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGSAQLKEDIDRVRAEIAKLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N +K LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEAQLKQVTQAEEQEQHNPSKPRLLRTQVGTEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RV+GQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 568 IEEKLHERVIGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E++K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGSPQEVVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L+++ AAL +
Sbjct: 748 EEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLARLHERLAKLDMQLEVTDAALDQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|171317872|ref|ZP_02907049.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MEX-5]
gi|171096941|gb|EDT41811.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MEX-5]
Length = 865
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/673 (67%), Positives = 574/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I++L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLERVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ EAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQHEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 IEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPVFGAR 820
>gi|170692320|ref|ZP_02883483.1| ATP-dependent chaperone ClpB [Burkholderia graminis C4D1M]
gi|170142750|gb|EDT10915.1| ATP-dependent chaperone ClpB [Burkholderia graminis C4D1M]
Length = 865
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/673 (66%), Positives = 573/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L+ +Y++LE+IW EK ++ S Q+KEEI+K R +I + R+ + V++L+YG+L
Sbjct: 448 IERLDREYSDLEEIWTAEKAAVQGSAQLKEEIDKTRAEITRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
LE LKE +Q + + NN + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREKLL
Sbjct: 508 GLEAQLKEVTQAEAKEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREKLLQ 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE+ L +RV+GQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+A
Sbjct: 568 IEDKLHERVIGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAAF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQEAVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R N+ SIA IQL L ++L K++M L +S AL+
Sbjct: 748 TEVKLHFRPEFLNRIDDVVVFHALDRSNVQSIARIQLQRLHDRLAKLDMQLVVSDEALEH 807
Query: 661 ISNIGFDLIYGAR 673
+ +G+D ++GAR
Sbjct: 808 VGKVGYDPLFGAR 820
>gi|78066617|ref|YP_369386.1| ATPase AAA [Burkholderia sp. 383]
gi|77967362|gb|ABB08742.1| AAA ATPase, ClpB [Burkholderia sp. 383]
Length = 865
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/673 (67%), Positives = 573/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R + V++L+YG+L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQRDGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREKLL+
Sbjct: 508 QLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ EAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQHEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S+AAL++
Sbjct: 748 LEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSEAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|358636852|dbj|BAL24149.1| ClpB protein [Azoarcus sp. KH32C]
Length = 859
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/660 (68%), Positives = 563/660 (85%), Gaps = 4/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KY IDLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LTKYCIDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG KYRGEFE+RLK +LKEI+ + II+FIDE+
Sbjct: 221 QRIVNAEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLKEIAQEEGQIIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP LSRGELHCIGATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVESTIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKLERRLIQLKIE EA+KRE DE+S+KRL+LI+ EI KLE +YANL++
Sbjct: 401 IKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQKRLVLIRDEIEKLEREYANLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ SQ IKEEI+K+R ++ + RK + +++L+YG+L +LE LK +
Sbjct: 461 IWRSEKASVQGSQHIKEEIDKLRAQMAEMQRKGQYDKLAELQYGKLPQLEAQLKVAEEAG 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ KF LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E L RVVGQD
Sbjct: 521 ----SGERKFKLLRTQVGTEEIAEVVSRATGIPVSKMMQGEREKLLRMEERLHSRVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+ +F++EE +IR+DM
Sbjct: 577 EAVRLVSDAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKALAEFLFDSEEHLIRVDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL DE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKLAVM EVK +FRPEF+N
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKLAVMAEVKTFFRPEFVN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ K+I SIA IQL L+ +L +++M L+++ AAL +++ GFD I+GAR
Sbjct: 757 RIDEVVVFHALDEKHIASIARIQLQYLERRLARLDMTLQVTDAALAELAAAGFDPIFGAR 816
>gi|402566351|ref|YP_006615696.1| ClpB protein [Burkholderia cepacia GG4]
gi|402247548|gb|AFQ48002.1| ClpB protein [Burkholderia cepacia GG4]
Length = 865
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/673 (67%), Positives = 573/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ EAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQHEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGSPQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 LEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPVFGAR 820
>gi|377821024|ref|YP_004977395.1| ATP-dependent chaperone ClpB [Burkholderia sp. YI23]
gi|357935859|gb|AET89418.1| ATP-dependent chaperone ClpB [Burkholderia sp. YI23]
Length = 865
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/660 (67%), Positives = 568/660 (86%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGMTIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L +Y++LE+
Sbjct: 401 IKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEKDEASQKRLQLIEEEIERLNREYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L +LE LK+ +Q +
Sbjct: 461 IWTAEKAAVQGSAQLKEEIEKVRADITRLQREGKLEKVAELQYGKLPELEARLKQVTQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL IE+ L +RV+GQD
Sbjct: 521 SQEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLQIESKLHERVIGQD 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+A +F++E+ ++RIDM
Sbjct: 581 EAIGAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAAFLFDSEDHLVRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 641 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV EVK++FRPEF+N
Sbjct: 701 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQGMIGEPQESVKDAVWEEVKLHFRPEFLN 760
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RIDD++VF L+R NI +IA IQL L ++L K++M+ ++S AAL++I +G+D ++GAR
Sbjct: 761 RIDDVVVFHALDRSNISAIAKIQLQRLHDRLAKLDMEFEVSDAALEQIGKVGYDPVFGAR 820
>gi|221198117|ref|ZP_03571163.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M]
gi|221208392|ref|ZP_03581395.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2]
gi|221215144|ref|ZP_03588111.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1]
gi|421471427|ref|ZP_15919714.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans ATCC
BAA-247]
gi|421475449|ref|ZP_15923396.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans CF2]
gi|221165080|gb|EED97559.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1]
gi|221171805|gb|EEE04249.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2]
gi|221182049|gb|EEE14450.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M]
gi|400225514|gb|EJO55675.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans ATCC
BAA-247]
gi|400230122|gb|EJO59935.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans CF2]
Length = 865
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/673 (67%), Positives = 574/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAI+AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAINAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMTGSPQDEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 LEVKQHFRPEFLNRIDDVVVFHGLDRHNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPLFGAR 820
>gi|134295878|ref|YP_001119613.1| ATPase [Burkholderia vietnamiensis G4]
gi|134139035|gb|ABO54778.1| ATPase AAA-2 domain protein [Burkholderia vietnamiensis G4]
Length = 865
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/673 (67%), Positives = 572/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q + + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLESQLKQVTQAEAQEQHAPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ + +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSLTGSPQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 IEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|350545741|ref|ZP_08915197.1| ClpB protein [Candidatus Burkholderia kirkii UZHbot1]
gi|350526470|emb|CCD40355.1| ClpB protein [Candidatus Burkholderia kirkii UZHbot1]
Length = 865
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/660 (68%), Positives = 566/660 (85%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+A LLAG KYRGEFE+RLK +L +I+ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPEMLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L +Y++LE+
Sbjct: 401 IKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEKDETSQKRLQLIEEEIERLNREYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L +LE L++ +Q +
Sbjct: 461 IWTAEKAAVQGSAQLKEEIEKVRADITRLQREGKLEKVAELQYGKLPELEARLRQVTQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q NN + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREKLL IE L +RV+GQD
Sbjct: 521 SQEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQREREKLLQIEGKLHERVIGQD 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AV+NAIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+A +F++E+ +IRIDM
Sbjct: 581 EAIGAVANAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAAFLFDSEDHLIRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 641 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV EVK++FRPEF+N
Sbjct: 701 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQGMVGKPQEKVKDAVWEEVKLHFRPEFLN 760
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RIDD++VF L+R NI SIA IQL L+ +L K++M L++S A L++I +G+D +GAR
Sbjct: 761 RIDDVVVFHALDRTNIESIAKIQLQRLQERLAKLDMQLEVSDAVLEQIGKVGYDPHFGAR 820
>gi|161524599|ref|YP_001579611.1| ATP-dependent chaperone ClpB [Burkholderia multivorans ATCC 17616]
gi|189350645|ref|YP_001946273.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
gi|160342028|gb|ABX15114.1| ATP-dependent chaperone ClpB [Burkholderia multivorans ATCC 17616]
gi|189334667|dbj|BAG43737.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
Length = 865
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/673 (67%), Positives = 573/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q +N + LL+T VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEAQLKQVTQAEEQEQHNPTRPRLLRTHVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAI+AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAINAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMTGSPQDEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 LEVKQHFRPEFLNRIDDVVVFHGLDRHNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPLFGAR 820
>gi|427401776|ref|ZP_18892848.1| chaperone ClpB [Massilia timonae CCUG 45783]
gi|425719488|gb|EKU82421.1| chaperone ClpB [Massilia timonae CCUG 45783]
Length = 869
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 566/660 (85%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP+SL K++L LD+A LLAG K+RGEFE+RLK +LKE++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERLKSVLKELAQDEGQTIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQKI+V+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQKIIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HH V+ITDPAI+AA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 341 PSVEATIAILRGLQEKYELHHQVDITDPAIIAAAELSHRYITDRFLPDKAIDLIDEAAAK 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE+MD+LERR+IQLKIE EA+++E DE+S++RL L+ +EI +LE +Y + E+
Sbjct: 401 IKIEIDSKPEVMDRLERRMIQLKIEREAVRKETDEASQRRLELLGEEIARLEREYNDYEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+ K EK ++ + I+EEIE++R ++ +A R+S+WQ S+L+YG L +LE L++
Sbjct: 461 VLKAEKAAVQGTTHIREEIERIRYQMEEARRQSNWQLASELQYGRLPELEAQLRQAEDAT 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + K LL+T+VG+EEIAE+VSR TGIPV++++Q ER+KLL+IE+ L KRVVGQD
Sbjct: 521 ARAEADNVKPKLLRTQVGAEEIAEVVSRATGIPVARMMQGERDKLLHIEDELHKRVVGQD 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVS+AIRRSR+GLSD RPYGSFMFLGPTGVGKTELCK L+A +F+ E+++IRIDM
Sbjct: 581 EAIEAVSDAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTELCKALAAFLFDTEDALIRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN+LLQ L
Sbjct: 641 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQAL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS +I+ M+ + ++KLAVM EV+ +FRPEFIN
Sbjct: 701 DDGRMTDGQGRTVDFKNTVIVMTSNLGSHRIQSMDTDEPAVVKLAVMAEVRGHFRPEFIN 760
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I+VF L+ KNI +IA IQL+ L+ +L KM M L I +L++I+ G+D +YGAR
Sbjct: 761 RIDEIVVFHALDEKNIGAIARIQLHNLEARLAKMEMTLDIDDESLQRIAEAGYDPVYGAR 820
>gi|167836362|ref|ZP_02463245.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
gi|424903869|ref|ZP_18327382.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
gi|390931742|gb|EIP89143.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
Length = 865
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/673 (67%), Positives = 573/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA++IK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASRIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQKRLALIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEARLKQVAQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 568 IEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGASQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AAL++
Sbjct: 748 VEVKQHFRPEFLNRIDDVVVFHSLDRSNIQAIARIQLARLHDRLAKLDMALDVSEAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
IS +G+D ++GAR
Sbjct: 808 ISKVGYDPLFGAR 820
>gi|209519546|ref|ZP_03268339.1| ATP-dependent chaperone ClpB [Burkholderia sp. H160]
gi|209500025|gb|EEA00088.1| ATP-dependent chaperone ClpB [Burkholderia sp. H160]
Length = 865
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/673 (66%), Positives = 572/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRIINGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIINGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +Y++LE+IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG+L
Sbjct: 448 IERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
LE LKE ++ + + N+ + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL
Sbjct: 508 GLEAQLKEVTRAEAEEQNSPKRLRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLQ 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE+ L +RVVGQDEAI+AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IESKLHERVVGQDEAINAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQEAVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L +S AAL+
Sbjct: 748 EEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLGRLHERLAKLDMQLVVSDAALEH 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|187923803|ref|YP_001895445.1| ATP-dependent chaperone ClpB [Burkholderia phytofirmans PsJN]
gi|187714997|gb|ACD16221.1| ATP-dependent chaperone ClpB [Burkholderia phytofirmans PsJN]
Length = 865
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/673 (66%), Positives = 569/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLSDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +Y++LE+IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG+L
Sbjct: 448 IERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
LE LKE ++ + NN + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREKLL
Sbjct: 508 GLEAQLKEVTKAEASEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREKLLQ 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L RVVGQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHARVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGEPQEAVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L +S +AL+
Sbjct: 748 EEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLQRLHERLAKLDMQLVVSDSALEH 807
Query: 661 ISNIGFDLIYGAR 673
+ +G+D ++GAR
Sbjct: 808 VGKVGYDPLFGAR 820
>gi|387902393|ref|YP_006332732.1| ClpB protein [Burkholderia sp. KJ006]
gi|387577285|gb|AFJ86001.1| ClpB protein [Burkholderia sp. KJ006]
Length = 865
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/673 (67%), Positives = 570/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ Q+KEEIEKVR I + R+ + V++L+YG L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGGAQLKEEIEKVRADIVRLQREGKLEKVAELQYGRLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q + + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLESQLKQVTQAEAQEQHAPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ + +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSLTGSPQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 IEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|254252226|ref|ZP_04945544.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
gi|124894835|gb|EAY68715.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
Length = 865
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/673 (67%), Positives = 573/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +Y++LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEAQLKQVTQAEEREQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHERVVGQDEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMSGSPQDEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AAL++
Sbjct: 748 IEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I+ +G+D ++GAR
Sbjct: 808 IAKVGYDPLFGAR 820
>gi|307729565|ref|YP_003906789.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1003]
gi|307584100|gb|ADN57498.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1003]
Length = 865
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/673 (66%), Positives = 570/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L+ +Y++LE+IW EK ++ S Q+KEEI++ R +I + R+ + V++L+YG+L
Sbjct: 448 IERLDREYSDLEEIWTAEKAAVQGSAQLKEEIDRTRAEITRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
LE LKE +Q + + NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL
Sbjct: 508 GLEAQLKEVTQAEAKEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLQ 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RV+GQDEAI+AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+A
Sbjct: 568 IEEKLHERVIGQDEAINAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAAF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGEPQEAVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R N+ SIA IQL L +L K++M L +S AL+
Sbjct: 748 TEVKLHFRPEFLNRIDDVVVFHALDRSNVQSIARIQLQRLHERLAKLDMQLVVSDEALEH 807
Query: 661 ISNIGFDLIYGAR 673
+ +G+D ++GAR
Sbjct: 808 VGKVGYDPLFGAR 820
>gi|295676449|ref|YP_003604973.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1002]
gi|295436292|gb|ADG15462.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1002]
Length = 865
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/673 (66%), Positives = 572/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +Y++LE+IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG+L
Sbjct: 448 IERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEIVRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
LE LKE ++ + + N+ + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL
Sbjct: 508 GLEAQLKEVTRAEAEEQNSPKRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLQ 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE+ L +RVVGQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IESKLHERVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQEAVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L +S AAL+
Sbjct: 748 EEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLQRLHERLAKLDMQLVVSDAALEH 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|83719137|ref|YP_442726.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
gi|167581671|ref|ZP_02374545.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis TXDOH]
gi|167619788|ref|ZP_02388419.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis Bt4]
gi|257138938|ref|ZP_05587200.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
gi|83652962|gb|ABC37025.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
Length = 865
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/673 (66%), Positives = 571/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQKRLALIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGRQYADLEEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 568 IEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K+ M L +S+AAL++
Sbjct: 748 VEVKQHFRPEFLNRIDDVVVFHSLDRSNIQAIAKIQLARLHDRLAKLEMALDVSEAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|325982689|ref|YP_004295091.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. AL212]
gi|325532208|gb|ADZ26929.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. AL212]
Length = 860
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/660 (68%), Positives = 563/660 (85%), Gaps = 3/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNN VLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNLVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP SL K++L+LD+A LLAG KYRGEFE+RLK +LKE++ ++ I+FIDEL
Sbjct: 221 QRIINGEVPESLKDKRVLVLDMAALLAGAKYRGEFEERLKSVLKELAQDEGKTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVEVTIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPEI+DKL+RRLIQLKIE EAIK+E DE+S+KRL L+++EI E +Y +L +
Sbjct: 401 IRMEIDSKPEILDKLDRRLIQLKIEREAIKKEKDEASQKRLQLLEEEIKHKEREYDDLAE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + SQQIKE +EK++L+I ATRK DWQ VS+L+YG L +LE L++ + +
Sbjct: 461 IWKAEKFQVHGSQQIKEAMEKLKLEIEAATRKGDWQKVSELQYGRLPQLEAQLQQTAGNE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+A LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E L RVVGQD
Sbjct: 521 ---STSALTPRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLLMEQKLHDRVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+ +F++E+ +IR+DM
Sbjct: 578 EAVRLVSDAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRVDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRRKPY++ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRKPYAVILLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I+EM + + IK AVMNEVK YFRPEFIN
Sbjct: 698 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQEMSGNEYQAIKQAVMNEVKTYFRPEFIN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L K+I SIA IQL+ L+ +L K+ + L +S+AAL +S GFD ++GAR
Sbjct: 758 RIDEVVVFHALGEKHIHSIARIQLHSLEARLAKLEIQLIVSEAALTALSQAGFDPVFGAR 817
>gi|91783442|ref|YP_558648.1| heat-shock protein, chaperone ClpB [Burkholderia xenovorans LB400]
gi|385209766|ref|ZP_10036634.1| ATP-dependent chaperone ClpB [Burkholderia sp. Ch1-1]
gi|91687396|gb|ABE30596.1| Heat-shock protein, chaperone ClpB [Burkholderia xenovorans LB400]
gi|385182104|gb|EIF31380.1| ATP-dependent chaperone ClpB [Burkholderia sp. Ch1-1]
Length = 865
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/673 (66%), Positives = 568/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +Y++L++IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG+L
Sbjct: 448 IERLNREYSDLDEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
LE LKE ++ + NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL
Sbjct: 508 GLEAQLKEVTKAEASEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLQ 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L RVVGQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L++
Sbjct: 568 IEEKLHARVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALASF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQEAVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L+ +L K++M L +S AL+
Sbjct: 748 EEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLQRLQERLAKLDMQLLVSDEALEH 807
Query: 661 ISNIGFDLIYGAR 673
+ +G+D ++GAR
Sbjct: 808 VGKVGYDPLFGAR 820
>gi|167587015|ref|ZP_02379403.1| AAA ATPase, ClpB [Burkholderia ubonensis Bu]
Length = 865
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/673 (66%), Positives = 573/673 (85%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +Y++LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+L+ LK+ +Q + + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLDAQLKQVTQAEEREQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+A
Sbjct: 568 IEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAAF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMAGSPQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S+AAL++
Sbjct: 748 LEVKQHFRPEFLNRIDDVVVFHALDRGNIQSIAKIQLARLHDRLAKLDMALDVSEAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
+ +G+D ++GAR
Sbjct: 808 VGKVGYDPLFGAR 820
>gi|186475703|ref|YP_001857173.1| ATP-dependent chaperone ClpB [Burkholderia phymatum STM815]
gi|184192162|gb|ACC70127.1| ATP-dependent chaperone ClpB [Burkholderia phymatum STM815]
Length = 865
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/673 (66%), Positives = 570/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RR IQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRRIQLKIEREAVKKEKDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L+ +Y++LE+IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG+L
Sbjct: 448 IQRLDREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK ++ + + NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL
Sbjct: 508 QLEAQLKAVTKAEAEEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLQ 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+A
Sbjct: 568 IEEKLHQRVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAAF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F+ E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHVIQSMVGEPQEAVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R NI SIA IQL + +L K++M L +S+AAL+
Sbjct: 748 EEVKLHFRPEFLNRIDDVVVFHALDRANIQSIAKIQLERVHERLAKLDMQLVVSEAALEL 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|253998254|ref|YP_003050317.1| ATP-dependent chaperone ClpB [Methylovorus glucosetrophus SIP3-4]
gi|253984933|gb|ACT49790.1| ATP-dependent chaperone ClpB [Methylovorus glucosetrophus SIP3-4]
Length = 861
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 563/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTMDLTERARAGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L LD+A LLAG KYRG+FE+RLK +LKE++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPESLKNKRVLSLDMAALLAGAKYRGDFEERLKSVLKELAQDEGQTIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSQRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKL+RRLIQLKIE EA+++E DE+S+KR LI+ EI +LE +YA+L+
Sbjct: 401 IKMEIDSKPEVMDKLDRRLIQLKIEREAVRKEKDEASQKRFDLIEDEIKRLEREYADLDD 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ S IKE IEK++ ++ +A R+ DWQ VS+++YG+L +LE L + + ++
Sbjct: 461 IWKSEKAQVQGSAHIKEAIEKLKQQMEEAKREGDWQRVSEMQYGKLPQLEAQLNKAASEE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ N+ LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 521 LNGVPVKNR--LLRTQVGAEEIAEVVSRATGIPVSKMLQGERDKLLTMEDKLHERVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V++AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCK L+ +F++EE ++RIDM
Sbjct: 579 EAVRLVADAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKALANFLFDSEEHLVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGG LTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVSRLIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+I+MTSNLGS I+ M D +++KLAVM EVK +FRPEFIN
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMSGDDYQVVKLAVMGEVKTHFRPEFIN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L ++ SIA IQL L +L M+M L+++ +AL +I+ GFD +YGAR
Sbjct: 759 RIDEVVVFHSLGEAHVKSIAGIQLQSLAKRLNAMDMQLEVTPSALAEIAAAGFDPVYGAR 818
>gi|126442131|ref|YP_001059258.1| ATPase AAA [Burkholderia pseudomallei 668]
gi|167719228|ref|ZP_02402464.1| ATPase AAA-2 [Burkholderia pseudomallei DM98]
gi|167893910|ref|ZP_02481312.1| ATPase AAA-2 [Burkholderia pseudomallei 7894]
gi|167918626|ref|ZP_02505717.1| ATPase AAA-2 [Burkholderia pseudomallei BCC215]
gi|126221624|gb|ABN85130.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 668]
Length = 865
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/673 (66%), Positives = 572/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 568 IEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AAL++
Sbjct: 748 VEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|323526162|ref|YP_004228315.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1001]
gi|407713481|ref|YP_006834046.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Burkholderia phenoliruptrix BR3459a]
gi|323383164|gb|ADX55255.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1001]
gi|407235665|gb|AFT85864.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Burkholderia phenoliruptrix BR3459a]
Length = 865
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/673 (66%), Positives = 570/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L+ +Y++LE+IW EK ++ S Q+KEEI++ R +I + R+ + V++L+YG+L
Sbjct: 448 IERLDREYSDLEEIWTAEKAAVQGSAQLKEEIDRTRAEITRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
LE LKE +Q + + NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL
Sbjct: 508 GLEAQLKEVTQAEAKEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLQ 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RV+GQDEAI+AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+A
Sbjct: 568 IEEKLHERVIGQDEAINAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAAF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQEAVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R N+ SIA IQL L +L K++M L +S AL+
Sbjct: 748 AEVKLHFRPEFLNRIDDVVVFHALDRSNVQSIARIQLQRLHERLAKLDMQLVVSDEALEH 807
Query: 661 ISNIGFDLIYGAR 673
+ +G+D ++GAR
Sbjct: 808 VGKVGYDPLFGAR 820
>gi|134277175|ref|ZP_01763890.1| ATP-dependent chaperone protein ClpB [Burkholderia pseudomallei
305]
gi|134250825|gb|EBA50904.1| ATP-dependent chaperone protein ClpB [Burkholderia pseudomallei
305]
Length = 865
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/673 (66%), Positives = 572/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 568 IEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSPQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AAL++
Sbjct: 748 VEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|390572032|ref|ZP_10252259.1| ATP-dependent chaperone ClpB [Burkholderia terrae BS001]
gi|420256959|ref|ZP_14759764.1| ATP-dependent chaperone ClpB [Burkholderia sp. BT03]
gi|389936015|gb|EIM97916.1| ATP-dependent chaperone ClpB [Burkholderia terrae BS001]
gi|398042076|gb|EJL35121.1| ATP-dependent chaperone ClpB [Burkholderia sp. BT03]
Length = 865
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/673 (66%), Positives = 569/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIEKDA
Sbjct: 268 KDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RR IQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRRIQLKIEREAVKKEKDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L+ +Y++LE+IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG+L
Sbjct: 448 IERLDREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK ++ + + NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL
Sbjct: 508 QLESQLKAVTKAEAEEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLQ 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQDEAI+AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+A
Sbjct: 568 IEEKLHQRVVGQDEAITAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAAF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F+ E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGQPEEAVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R NI SIA IQL + +L K++M L +S AAL+
Sbjct: 748 EEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLERVHERLAKLDMQLVVSDAALEL 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|313200327|ref|YP_004038985.1| ATP-dependent chaperone clpb [Methylovorus sp. MP688]
gi|312439643|gb|ADQ83749.1| ATP-dependent chaperone ClpB [Methylovorus sp. MP688]
Length = 886
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 563/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 186 LKKYTMDLTERARAGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 245
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L LD+A LLAG KYRG+FE+RLK +LKE++ ++ I+FIDE+
Sbjct: 246 QRIVNGEVPESLKNKRVLSLDMAALLAGAKYRGDFEERLKSVLKELAQDEGQTIVFIDEI 305
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 306 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 365
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 366 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSQRYITDRFLPDKAIDLIDEAASR 425
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKL+RRLIQLKIE EA+++E DE+S+KR LI+ EI +LE +YA+L+
Sbjct: 426 IKMEIDSKPEVMDKLDRRLIQLKIEREAVRKEKDEASQKRFDLIEDEIKRLEREYADLDD 485
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ S IKE IEK++ ++ +A R+ DWQ VS+++YG+L +LE L + + ++
Sbjct: 486 IWKSEKAQVQGSAHIKEAIEKLKQQMEEAKREGDWQRVSEMQYGKLPQLEAQLNKAASEE 545
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ N+ LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 546 LNGVPVKNR--LLRTQVGAEEIAEVVSRATGIPVSKMLQGERDKLLTMEDKLHERVVGQD 603
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V++AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCK L+ +F++EE ++RIDM
Sbjct: 604 EAVRLVADAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKALANFLFDSEEHLVRIDM 663
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGG LTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 664 SEFMEKHSVSRLIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 723
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+I+MTSNLGS I+ M D +++KLAVM EVK +FRPEFIN
Sbjct: 724 DDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMSGDDYQVVKLAVMGEVKTHFRPEFIN 783
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L ++ SIA IQL L +L M+M L+++ +AL +I+ GFD +YGAR
Sbjct: 784 RIDEVVVFHSLGEAHVKSIAGIQLQSLAKRLNAMDMQLEVTPSALAEIAAAGFDPVYGAR 843
>gi|76812125|ref|YP_333784.1| ClpB heat-shock protein [Burkholderia pseudomallei 1710b]
gi|167738226|ref|ZP_02411000.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei 14]
gi|167902362|ref|ZP_02489567.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei NCTC 13177]
gi|167910600|ref|ZP_02497691.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei 112]
gi|254261495|ref|ZP_04952549.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1710a]
gi|254297398|ref|ZP_04964851.1| clpB protein [Burkholderia pseudomallei 406e]
gi|386861504|ref|YP_006274453.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026b]
gi|418533774|ref|ZP_13099633.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026a]
gi|418540647|ref|ZP_13106174.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258a]
gi|418546892|ref|ZP_13112080.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258b]
gi|76581578|gb|ABA51053.1| ClpB heat-shock protein [Burkholderia pseudomallei 1710b]
gi|157807919|gb|EDO85089.1| clpB protein [Burkholderia pseudomallei 406e]
gi|254220184|gb|EET09568.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1710a]
gi|385360734|gb|EIF66648.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026a]
gi|385361021|gb|EIF66923.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258a]
gi|385362820|gb|EIF68618.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258b]
gi|385658632|gb|AFI66055.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026b]
Length = 865
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/673 (66%), Positives = 572/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 568 IEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AAL++
Sbjct: 748 VEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|238027045|ref|YP_002911276.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
glumae BGR1]
gi|237876239|gb|ACR28572.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
glumae BGR1]
Length = 865
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/673 (65%), Positives = 572/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSADAESQREALKKYTVDLTERARSGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK++V+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVIVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPESMDRLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+LE+IW EK ++ S Q+KE+I++VR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLEEIWTAEKAAVQGSAQLKEDIDRVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + Q N ++ LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEAQLKQVTQAEEQNEQNPSRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RV+GQ+EAI AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTE+CK L+
Sbjct: 568 IEEKLHERVIGQEEAIDAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTEVCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMAGSPQEAVKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK++FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S AAL +
Sbjct: 748 EEVKLHFRPEFLNRIDDVVVFHALDRANIQAIAKIQLARLHDRLAKLDMQLDVSDAALDQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|53723604|ref|YP_103036.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 23344]
gi|67639679|ref|ZP_00438519.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei GB8 horse
4]
gi|121598639|ref|YP_993186.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei SAVP1]
gi|124385885|ref|YP_001026039.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei NCTC 10229]
gi|126448469|ref|YP_001080692.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei NCTC 10247]
gi|167003461|ref|ZP_02269247.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei PRL-20]
gi|254178097|ref|ZP_04884752.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 10399]
gi|254206315|ref|ZP_04912667.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei JHU]
gi|254358273|ref|ZP_04974546.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei
2002721280]
gi|52427027|gb|AAU47620.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 23344]
gi|121227449|gb|ABM49967.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei SAVP1]
gi|124293905|gb|ABN03174.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei NCTC
10229]
gi|126241339|gb|ABO04432.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei NCTC
10247]
gi|147753758|gb|EDK60823.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei JHU]
gi|148027400|gb|EDK85421.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei
2002721280]
gi|160699136|gb|EDP89106.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 10399]
gi|238520268|gb|EEP83730.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei GB8 horse
4]
gi|243061022|gb|EES43208.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei PRL-20]
Length = 865
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/673 (66%), Positives = 572/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 568 IEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AAL++
Sbjct: 748 VEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|126453997|ref|YP_001066525.1| clpB protein [Burkholderia pseudomallei 1106a]
gi|167815415|ref|ZP_02447095.1| ClpB heat-shock protein [Burkholderia pseudomallei 91]
gi|167823825|ref|ZP_02455296.1| ClpB heat-shock protein [Burkholderia pseudomallei 9]
gi|167845366|ref|ZP_02470874.1| ClpB heat-shock protein [Burkholderia pseudomallei B7210]
gi|217421888|ref|ZP_03453392.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 576]
gi|226197488|ref|ZP_03793065.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei Pakistan 9]
gi|237812581|ref|YP_002897032.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei MSHR346]
gi|242314296|ref|ZP_04813312.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106b]
gi|254179519|ref|ZP_04886118.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1655]
gi|254197201|ref|ZP_04903623.1| clpB protein [Burkholderia pseudomallei S13]
gi|403518952|ref|YP_006653085.1| clpB protein [Burkholderia pseudomallei BPC006]
gi|418382969|ref|ZP_12966888.1| ClpB heat-shock protein [Burkholderia pseudomallei 354a]
gi|418553114|ref|ZP_13117952.1| ClpB heat-shock protein [Burkholderia pseudomallei 354e]
gi|126227639|gb|ABN91179.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106a]
gi|169653942|gb|EDS86635.1| clpB protein [Burkholderia pseudomallei S13]
gi|184210059|gb|EDU07102.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1655]
gi|217395630|gb|EEC35648.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 576]
gi|225930867|gb|EEH26877.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei Pakistan 9]
gi|237506453|gb|ACQ98771.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei MSHR346]
gi|242137535|gb|EES23937.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106b]
gi|385372048|gb|EIF77180.1| ClpB heat-shock protein [Burkholderia pseudomallei 354e]
gi|385376808|gb|EIF81443.1| ClpB heat-shock protein [Burkholderia pseudomallei 354a]
gi|403074594|gb|AFR16174.1| clpB protein [Burkholderia pseudomallei BPC006]
Length = 865
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/673 (66%), Positives = 572/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG+L
Sbjct: 448 IERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 568 IEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSPQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AAL++
Sbjct: 748 VEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|326316084|ref|YP_004233756.1| ATP-dependent chaperone ClpB [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323372920|gb|ADX45189.1| ATP-dependent chaperone ClpB [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 869
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/660 (67%), Positives = 560/660 (84%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNELAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEATIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE +DKL+RRLIQL+IE EA+++E DE+S+KRL L++ EI KL+ + A+LE
Sbjct: 399 IKIEIDSKPEAIDKLDRRLIQLQIEREAVRKEKDEASQKRLALLEDEIGKLQKEIADLED 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + SQQ++E++EKV+L+I + RK D+ V++L+YG+L LER LKE K+
Sbjct: 459 IWTSEKAQAQGSQQVREQVEKVKLQIEELKRKGDFNKVAELQYGKLPDLERQLKEAQAKE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
A LL+T+VG+EEIAE+VSR TGIPVSK++Q E++KLL +E+ L +RVVGQD
Sbjct: 519 EGTDGTATPNRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEKDKLLQMEDKLHERVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI+AV+NAIRRSRSGL+D RP GSF+FLGPTGVGKTELCK L+ +F++EE ++RIDM
Sbjct: 579 EAIAAVANAIRRSRSGLADPNRPMGSFLFLGPTGVGKTELCKALAGFLFDSEEHLVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + +K AV E+K YFRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDADDVKEAVWGELKNYFRPEFLN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI +IA IQL +L+ +L KM++ L++S AL +++ +GFD ++GAR
Sbjct: 759 RIDETVVFHALDAKNIEAIARIQLQLLEARLAKMDLHLQVSPGALSELAKVGFDPVFGAR 818
>gi|53719118|ref|YP_108104.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243]
gi|254189090|ref|ZP_04895601.1| clpB protein [Burkholderia pseudomallei Pasteur 52237]
gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243]
gi|157936769|gb|EDO92439.1| clpB protein [Burkholderia pseudomallei Pasteur 52237]
Length = 876
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/673 (66%), Positives = 572/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 159 QVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 218
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 219 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 278
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 279 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 338
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 339 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLP 398
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 399 DKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALIEEE 458
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG+L
Sbjct: 459 IERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYGKLP 518
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 519 QLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 578
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 579 IEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGF 638
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 639 LFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 698
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 699 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSPQEEIKDAVW 758
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AAL++
Sbjct: 759 VEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAALEQ 818
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 819 IGKVGYDPLFGAR 831
>gi|120609936|ref|YP_969614.1| ATPase [Acidovorax citrulli AAC00-1]
gi|120588400|gb|ABM31840.1| ATPase AAA-2 domain protein [Acidovorax citrulli AAC00-1]
Length = 869
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/660 (67%), Positives = 560/660 (84%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNELAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEATIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE +DKL+RRLIQL+IE EA+K+E DE+S+KRL L+++EI KL+ + A+LE
Sbjct: 399 IKIEIDSKPEAIDKLDRRLIQLQIEREAVKKEKDEASQKRLALLEEEIGKLQKEIADLED 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + SQQ++E++EKV+L+I + RK D+ V++L+YG L LER LKE K+
Sbjct: 459 IWTSEKAQAQGSQQVREQVEKVKLQIEELKRKGDFNKVAELQYGRLPDLERQLKEAQAKE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
A LL+T+VG+EEIAE+VSR TGIPVSK++Q E++KLL +E+ L +RVVGQD
Sbjct: 519 EGTDGTATPNRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEKDKLLQMEDKLHERVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI+AV+NAIRRSRSGL+D RP GSF+FLGPTGVGKTELCK L+ +F++EE ++RIDM
Sbjct: 579 EAIAAVANAIRRSRSGLADPNRPMGSFLFLGPTGVGKTELCKALAGFLFDSEEHLVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + +K AV E+K +FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDADDVKEAVWGELKNHFRPEFLN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI +IA IQL +L+ +L KM++ L++S AL +++ +GFD ++GAR
Sbjct: 759 RIDETVVFHALDAKNIEAIARIQLQLLEARLAKMDLHLQVSPGALSELAKVGFDPVFGAR 818
>gi|30250327|ref|NP_842397.1| ClpB ATPase dependent protease, chaperonin [Nitrosomonas europaea
ATCC 19718]
gi|54035824|sp|Q82SD8.1|CLPB_NITEU RecName: Full=Chaperone protein ClpB
gi|30181122|emb|CAD86314.1| ClpB ATPase dependent protease, chaperonin [Nitrosomonas europaea
ATCC 19718]
Length = 863
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/660 (67%), Positives = 562/660 (85%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARSGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +LKE++ ++ I+FIDEL
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLKELAQDEGRTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PGVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E DSKPE+MDKL+RRLIQLKIE EA+++E D++SKKRL L+++EI+KLE +YA+L++
Sbjct: 401 IRMEQDSKPEVMDKLDRRLIQLKIEREAVRKEKDDASKKRLALLEEEISKLEREYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
I K EK+ K SQ+IKEE++K+R + A RK D Q S+L YG + +LE L E+
Sbjct: 461 ILKAEKSRAKGSQEIKEELDKLRREEEAARRKGDLQRASELLYGRIPQLEAQLAEQLHH- 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ A + L +T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E+ L +RV+GQD
Sbjct: 520 AESAEEAVQPKLFRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLFMEDKLHERVIGQD 579
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSRSGL+D RPYGSF+FLGPTGVGKTELCK L+ +F++EE +IR+DM
Sbjct: 580 EAVRLVSDAIRRSRSGLADPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRVDM 639
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 640 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVL 699
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKLAVM EVK YFRPEFIN
Sbjct: 700 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKLAVMGEVKTYFRPEFIN 759
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L +I SIA IQL+ L +L +M M L +S+ AL K++ +GFD ++GAR
Sbjct: 760 RIDEVVVFHALGEAHIKSIARIQLSNLGKRLAQMEMKLVVSEPALTKLAEVGFDPVFGAR 819
>gi|388570198|ref|ZP_10156558.1| ATP-dependent chaperone ClpB [Hydrogenophaga sp. PBC]
gi|388262580|gb|EIK88210.1| ATP-dependent chaperone ClpB [Hydrogenophaga sp. PBC]
Length = 868
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/660 (68%), Positives = 564/660 (85%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTMDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP+SL K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPDSLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLHELAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV+E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE MD+L+RRLIQL+IE EAIK+E DE+S+KRL LI EI++L+ + A+LE+
Sbjct: 399 IKIEIDSKPEAMDRLDRRLIQLQIEREAIKKETDEASQKRLGLIDVEIDRLKRELADLEE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + S Q+KEEI+K+R +I + TRK D+ V++L+YG+L +LE+ LK+ +Q
Sbjct: 459 IWKAEKAQAQGSAQVKEEIDKLRHQIEEFTRKGDFNKVAELQYGKLPELEKRLKD-AQAA 517
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+A + LL+T+VG+EEIAE+V+R TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 518 ETGKKDAGRPQLLRTQVGAEEIAEVVARATGIPVSKLMQGERDKLLQMEDKLHQRVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++EE ++RIDM
Sbjct: 578 EAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEEHLVRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + +K AV E+K YFRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNIGSHMIQSMVGQPYDEVKEAVWGELKGYFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI +IA IQL L+ +L KM++ L +S AAL +++ +GFD ++GAR
Sbjct: 758 RIDETVVFHALDAKNIEAIAAIQLKALQARLHKMDLSLDVSPAALGELAKVGFDPVFGAR 817
>gi|395761758|ref|ZP_10442427.1| ATP-dependent protease Hsp 100 [Janthinobacterium lividum PAMC
25724]
Length = 868
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/661 (68%), Positives = 571/661 (86%), Gaps = 4/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARKGKLDPVIGRDDEIRRTIQILQRRSKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL K++L LD+A LLAG K+RGEFE+RLK +LKE++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERLKSVLKELAMDEGQTIVFIDEM 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ KY +HH VEITD AI+AA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 341 PSVEATIAILRGLQDKYALHHKVEITDAAIIAAAELSHRYITDRFLPDKAIDLIDEAAAK 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S +RL LI++EI KL+ +Y + E+
Sbjct: 401 IKIEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASLRRLGLIEEEIVKLQREYNDFEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
I K EK +++ S IKEEIE V+L++ +ATR+S+WQ VS+L+YG+L +LE LK Q D
Sbjct: 461 ILKAEKAVVQGSTHIKEEIENVKLQMEQATRESNWQKVSELQYGKLPQLEAQLK---QAD 517
Query: 374 IQLP-NNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+P + ++ LL+T+VG+EEIAE+VSR TGIPVS+++Q ER+KLL+IE L +RVVGQ
Sbjct: 518 SGIPKRDPDQPKLLRTEVGAEEIAEVVSRATGIPVSRMMQGERDKLLHIEEKLHERVVGQ 577
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEAI+AV++AIRRSR+GL+D RPYGSFMFLGPTGVGKTEL K L+ +F+ EES+IRID
Sbjct: 578 DEAITAVADAIRRSRAGLADPNRPYGSFMFLGPTGVGKTELSKALATFLFDTEESMIRID 637
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS+ILLDE+EKA++DVFN+LLQ+
Sbjct: 638 MSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSVILLDEVEKAHADVFNVLLQV 697
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGR+TD +GRT++F+NT+I+MTSNLGS KI+ ME D ++KLAVM EV+ +FRPEF+
Sbjct: 698 LDDGRMTDGQGRTVDFKNTVIIMTSNLGSHKIQAMESDDPGVVKLAVMAEVRSHFRPEFV 757
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+I+VF L+ KNI +IA IQL IL+ +L +M+M L ++ AAL++I+ G+D +YGA
Sbjct: 758 NRIDEIVVFHGLDEKNIGAIAKIQLKILEERLARMDMQLSLTDAALQQIAEAGYDPVYGA 817
Query: 673 R 673
R
Sbjct: 818 R 818
>gi|319763932|ref|YP_004127869.1| ATP-dependent chaperone clpb [Alicycliphilus denitrificans BC]
gi|330823804|ref|YP_004387107.1| ATP-dependent chaperone ClpB [Alicycliphilus denitrificans K601]
gi|317118493|gb|ADV00982.1| ATP-dependent chaperone ClpB [Alicycliphilus denitrificans BC]
gi|329309176|gb|AEB83591.1| ATP-dependent chaperone ClpB [Alicycliphilus denitrificans K601]
Length = 867
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/660 (67%), Positives = 567/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP +L +K++L+LD+A LLAG KYRGEFE+RLK +LKE++ ++ II+FIDE+
Sbjct: 219 QRIVAGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKSVLKEVAQDEGRIILFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 279 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVEE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ +YE HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 339 PSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE +DKLERR+IQLKIE EA+K+E DE+S+KRL LI++E+ E +YA+LE+
Sbjct: 399 IKIEIDSKPEALDKLERRMIQLKIEREAMKKETDEASQKRLQLIEEELANAEREYADLEE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + S+QI+++I+ +R++I RK D+ V++L+YG+L +LE+ LKE +D
Sbjct: 459 VWKAEKASAQGSEQIRKDIDAIRIQIEDLKRKGDYNRVAELQYGKLPELEKRLKEA--QD 516
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ A + LL+T VG+EEIAE+VSR TGIPV+K++Q E++KLL++E L +RVVGQD
Sbjct: 517 SEAGGGAPRHQLLRTHVGAEEIAEVVSRATGIPVAKMMQGEKDKLLHMEEKLHERVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++EE ++RIDM
Sbjct: 577 EAISAVANAIRRSRSGLSDPNRPLGSFLFLGPTGVGKTELCKALAGFLFDSEEHMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D E IK AV E+K +FRPEF+N
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIVMTSNIGSPLIQAMVGQDAEDIKEAVWGELKSHFRPEFLN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ K+I +IA IQL +L+ +L KM++ L++S AA+ +++ +GFD ++GAR
Sbjct: 757 RIDETVVFHGLDAKHIEAIARIQLRLLEARLAKMDLSLQVSPAAMGELAKVGFDPVFGAR 816
>gi|339326277|ref|YP_004685970.1| chaperone protein ClpB [Cupriavidus necator N-1]
gi|338166434|gb|AEI77489.1| chaperone protein ClpB [Cupriavidus necator N-1]
Length = 862
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/660 (68%), Positives = 564/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTERARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +++ ++ I+FIDE+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDVAKDEGQTIVFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S KRL LI++EI +LE +YA+L++
Sbjct: 400 IKMEIDSKPESMDKLERRTIQLKIEREAVKKETDEASMKRLELIEQEIARLEKEYADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEIEKV+L+I K R+ V++L+YG+L LE LK + +
Sbjct: 460 IWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVAELQYGKLPGLEGKLKAATDAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E+ L RVVGQD
Sbjct: 520 ASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLKMEDRLHARVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGLADENRPYGSFLFLGPTGVGKTELCKALAEFMFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV EV+ +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMTGEPQEAIKGAVWQEVRTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++K+I SIA IQL+ L+ +L +M+M L++S+ AL+KI++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQKHIESIARIQLHRLQARLARMDMTLEVSETALEKIASAGYDPVFGAR 817
>gi|73541668|ref|YP_296188.1| ATPase AAA [Ralstonia eutropha JMP134]
gi|72119081|gb|AAZ61344.1| AAA ATPase, central region:Clp, N terminal [Ralstonia eutropha
JMP134]
Length = 862
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/660 (67%), Positives = 563/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTERARMGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +++ ++ I+FIDE+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDVAKDEGQTIVFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S KRL LI++EI +LE +YA+L++
Sbjct: 400 IKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASLKRLDLIEQEITRLEKEYADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEIEKV+L+I K R+ V++L+YG+L LE LK + +
Sbjct: 460 IWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVAELQYGKLPGLEGKLKAATDAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E+ L RVVGQD
Sbjct: 520 ASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLKMEDRLHNRVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GL+D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGLADENKPYGSFLFLGPTGVGKTELCKALAEFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV EV+ +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMVGEPQEAVKGAVWQEVRTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++KNI SIA IQL L+ +L +M+M L++S+ AL+KI++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQKNIESIARIQLQRLQGRLARMDMTLEVSELALEKIASAGYDPVFGAR 817
>gi|332528193|ref|ZP_08404221.1| ATP-dependent chaperone ClpB [Rubrivivax benzoatilyticus JA2]
gi|332112761|gb|EGJ12554.1| ATP-dependent chaperone ClpB [Rubrivivax benzoatilyticus JA2]
Length = 864
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/660 (67%), Positives = 563/660 (85%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L LD+A LLAG KYRGEFE+RLK +LKE+S ++ II+FIDEL
Sbjct: 220 QRIVNGEVPESLKNKRVLSLDMAGLLAGAKYRGEFEERLKAVLKEVSADEGRIILFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYVEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E T++ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 340 PSVEATVAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE MD+L+RR+IQLKIE EA+K+E DE+S++RL LI++E+ KL+ +Y +LE+
Sbjct: 400 IKIEIDSKPEAMDRLDRRMIQLKIEREAVKKEQDEASQRRLGLIEEELLKLQREYNDLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + S Q+KEEI++++ +I + RK D+ V++L+YG+L +LE+ LKE K+
Sbjct: 460 IWTAEKAQAQGSAQVKEEIDRIKFQIEELKRKGDFNRVAELQYGKLPELEKRLKEAQAKE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+T VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 520 AGKAQGGQGPQLLRTMVGAEEIAEVVSRATGIPVSKLMQGERDKLLQMESRLHERVVGQD 579
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AV++AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F++E+ +IR+DM
Sbjct: 580 EAIVAVADAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTELCKALASFLFDSEDHMIRVDM 639
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS+SRLIGAPPGY+GY+EGG LTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 640 SEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 699
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I +M E+++ AV EVK +FRPEF+N
Sbjct: 700 DDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMAGQPTELVREAVWGEVKSHFRPEFLN 759
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI +IA IQL +L+ +L K+ M L++S AAL +++ +GFD ++GAR
Sbjct: 760 RIDEAVVFHALDEKNIEAIAKIQLKLLETRLEKLEMKLEVSPAALAELAKVGFDPVFGAR 819
>gi|171058702|ref|YP_001791051.1| ATP-dependent chaperone ClpB [Leptothrix cholodnii SP-6]
gi|170776147|gb|ACB34286.1| ATP-dependent chaperone ClpB [Leptothrix cholodnii SP-6]
Length = 865
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/660 (67%), Positives = 557/660 (84%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR+GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTLDLTERARMGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +LKE++ ++ II+FIDEL
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLKEVAADEGRIILFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYRKYVEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E T++ILRGLQ+KYEVHHGV+ITDPAI+AA+ELS+RY++DRF+PDKAIDLIDEAAAK
Sbjct: 340 PSVEATVAILRGLQEKYEVHHGVQITDPAIIAAAELSHRYVTDRFLPDKAIDLIDEAAAK 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE MDKL+RRLIQLKIE EA+++E DE S +R LI++EI KLE + A+LE+
Sbjct: 400 IKIEMDSKPESMDKLDRRLIQLKIEREAVRKEKDEGSVRRFGLIEEEIAKLEREAADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + S+Q EEIE RL+I + RK D+ V++L+YG+L +LE+ L + K+
Sbjct: 460 IWKAEKAAAQGSKQFMEEIESARLQIEEFKRKGDFNRVAELQYGKLPELEKKLHDAQAKE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+T VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E L RVVGQ
Sbjct: 520 AGKAKGGQGPQLLRTVVGAEEIAEVVSRATGIPVAKLMQGERDKLLQMEGKLHDRVVGQS 579
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++++ +IRIDM
Sbjct: 580 EAIIAVSNAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTELCKALAGFLFDSDDHMIRIDM 639
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 640 SEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 699
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS +I +M D E+I+ AV EVK +FRPEF+N
Sbjct: 700 DDGRLTDGQGRTVDFKNTVIVMTSNLGSHQIMQMAGQDTELIREAVWAEVKQHFRPEFLN 759
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L++K+I +IA IQL L +L KM M L++S AL +++ +GFD ++GAR
Sbjct: 760 RIDEAVVFHALDQKHIEAIAQIQLKALAARLGKMEMTLEVSPEALAELAKVGFDPVFGAR 819
>gi|113868225|ref|YP_726714.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
gi|113527001|emb|CAJ93346.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
Length = 862
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/660 (68%), Positives = 563/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTERARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +++ ++ I+FIDE+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDVAKDEGQTIVFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S KRL LI++EI +LE +YA+L++
Sbjct: 400 IKMEIDSKPESMDKLERRTIQLKIEREAVKKETDEASMKRLELIEQEIARLEKEYADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEIEKV+L+I K R+ V++L+YG+L LE LK + +
Sbjct: 460 IWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVAELQYGKLPGLEGKLKAATDAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E+ L RVVGQD
Sbjct: 520 ASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLKMEDRLHGRVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGLADENRPYGSFLFLGPTGVGKTELCKALAEFMFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV EV+ +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMTGEPQEAIKGAVWQEVRTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++K+I SIA IQL L+ +L +M+M L++S+ AL+KI++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQKHIESIARIQLQRLQARLARMDMTLEVSETALEKIASAGYDPVFGAR 817
>gi|34497399|ref|NP_901614.1| ATP-dependent Clp protease subunit [Chromobacterium violaceum ATCC
12472]
gi|54035800|sp|Q7NWN7.1|CLPB_CHRVO RecName: Full=Chaperone protein ClpB
gi|34103255|gb|AAQ59618.1| ATP-dependent Clp protease subunit; heat-shock protein
[Chromobacterium violaceum ATCC 12472]
Length = 859
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/660 (67%), Positives = 566/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTMDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L ++S + +IFIDE+
Sbjct: 221 QRIVNGEVPESLKNKRLLVLDLAALIAGAKYRGEFEERLKAVLNDLSKDDGQTLIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 281 HTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSQRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+E+DSKPE MDKL+RRLIQLKIE EA+ +E DE+S+KRL LI+ EI +L +YA+LE+
Sbjct: 401 IKMELDSKPEAMDKLDRRLIQLKIEREAVNKESDEASQKRLKLIEDEIAELSREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + SQ IKEEI+++++ + + RK DWQ +++L+YG+L +LE LKE
Sbjct: 461 IWKAEKAAQQGSQSIKEEIDRLKVDMEELKRKGDWQKLAELQYGKLPQLEARLKEAESAG 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ N+ LL+T+VG+EEIAE+VSR TGIPVSK++ EREKLL +E++L +RVVGQD
Sbjct: 521 DKGEAKPNR--LLRTQVGAEEIAEVVSRATGIPVSKMLTGEREKLLKMEDVLHQRVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL++ +F++++ +IRIDM
Sbjct: 579 EAVSAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTLASFLFDSKDHLIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS +I+ M D ++IKLAVM EVK FRPEFIN
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIVMTSNIGSQQIQAMATDDYQVIKLAVMAEVKTQFRPEFIN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ K+I SIA IQL L+N+L K+ + L+IS AL +S GFD +YGAR
Sbjct: 759 RIDEVVVFHGLDEKHIQSIARIQLKSLENRLAKLELSLQISDEALALLSEAGFDPVYGAR 818
>gi|149927826|ref|ZP_01916077.1| probable atp-dependent protease (heat shock protein) [Limnobacter
sp. MED105]
gi|149823448|gb|EDM82679.1| probable atp-dependent protease (heat shock protein) [Limnobacter
sp. MED105]
Length = 862
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/662 (67%), Positives = 567/662 (85%), Gaps = 7/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERARMGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP++L +K++L+LD+ALLLAG KYRGEFE+RLK +LK+++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPDTLKNKRVLVLDMALLLAGAKYRGEFEERLKAVLKDVAADEGQTIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVESTIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RR+IQLKIE EA+KRE D++SKKRL LI++EI +LE +YA+L++
Sbjct: 401 IKMEIDSKPEEMDKLDRRIIQLKIEREAVKREQDDASKKRLALIEEEIVRLEREYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKE--KSQ 371
IWK EK ++ S IKEEI+ +R +I + RK DWQ VS+L+YG+L LE+ L + ++
Sbjct: 461 IWKSEKAAVQGSAAIKEEIDHIRAEIEQWKRKGDWQKVSELQYGKLPDLEKKLNDVKDNE 520
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
+ PN LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E L RVVG
Sbjct: 521 GGEKKPNR-----LLRTQVGTEEIAEVVSRATGIPVSKMLQGERDKLLQMEAALHMRVVG 575
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
QDEA++ VS+AIRRSR+GLSD +P GSF+FLGPTGVGKTELCK L+ +F++E+ ++RI
Sbjct: 576 QDEAVTLVSDAIRRSRAGLSDPNKPLGSFLFLGPTGVGKTELCKALAGFLFDSEDHLVRI 635
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSEF+EKH++SRL+GAPPGY+GY+EGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ
Sbjct: 636 DMSEFMEKHTVSRLVGAPPGYVGYDEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQ 695
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 611
+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+ + D E+IK AVM EVK++FRPEF
Sbjct: 696 VLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHEIQRLAGQDGEVIKAAVMEEVKMHFRPEF 755
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INR+D+++VF L+ +I +IA IQL L+ +L +M L++S AAL ++ GFD +YG
Sbjct: 756 INRVDELVVFHALDNAHIANIARIQLQRLQQRLASRDMRLEVSDAALAEVVKAGFDPLYG 815
Query: 672 AR 673
AR
Sbjct: 816 AR 817
>gi|222111721|ref|YP_002553985.1| ATP-dependent chaperone clpb [Acidovorax ebreus TPSY]
gi|221731165|gb|ACM33985.1| ATP-dependent chaperone ClpB [Acidovorax ebreus TPSY]
Length = 867
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/660 (67%), Positives = 567/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP +L +K++L+LD+A LLAG KYRGEFE+RLK +LKE+++ + II+FIDE+
Sbjct: 219 QRIVEGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKSVLKEVAHEEGRIILFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ +YE HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE MDKLERR+IQLKIE EA+K+E DE+S+KRL LI++E+ +E +YA+LE+
Sbjct: 399 IKIEIDSKPESMDKLERRMIQLKIEREAMKKETDEASQKRLQLIEEELGNVEREYADLEE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + S+QI+++I+ +R +I+ RK D+ V++L+YG L +LE+ LKE +D
Sbjct: 459 VWKAEKASAQGSEQIRKDIDAIRTQIDDLKRKGDFNKVAELQYGTLPELEKRLKEA--QD 516
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ K LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL++E L +RVVGQD
Sbjct: 517 SEAGGTGTKHKLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLHMEEKLHERVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++EE ++RIDM
Sbjct: 577 EAISAVANAIRRSRSGLSDPNRPLGSFLFLGPTGVGKTELCKALAGFLFDSEEHLVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D E IK AV E+K +FRPEF+N
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDAEDIKEAVWGELKGHFRPEFLN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ K+I +IA IQL +L+ +L KM++ L++S AA+ +++ +GFD ++GAR
Sbjct: 757 RIDETVVFHGLDAKHIEAIARIQLRLLEARLAKMDLALQVSPAAMGELAKVGFDPVFGAR 816
>gi|194289894|ref|YP_002005801.1| chaperone [Cupriavidus taiwanensis LMG 19424]
gi|193223729|emb|CAQ69736.1| Chaperone [Cupriavidus taiwanensis LMG 19424]
Length = 862
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/660 (68%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTERARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +++ ++ I+FIDE+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDVAKDEGQTIVFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S KRL LI++EI +LE +YA+L++
Sbjct: 400 IKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASLKRLDLIEQEIARLEKEYADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEIEKV+L+I K R+ V++L+YG+L LE LK + +
Sbjct: 460 IWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVAELQYGKLPGLEGKLKAATDAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E L RVVGQD
Sbjct: 520 ASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLKMEERLHARVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GL+D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGLADENKPYGSFLFLGPTGVGKTELCKALAEFMFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV EV+ +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMAGEPQEAIKGAVWQEVRTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++KNI SIA IQL L+ +L +M+M L++S AL+KI++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQKNIESIARIQLQRLQARLARMDMTLEVSDHALEKIASAGYDPVFGAR 817
>gi|334131884|ref|ZP_08505646.1| Chaperone protein ClpB [Methyloversatilis universalis FAM5]
gi|333443357|gb|EGK71322.1| Chaperone protein ClpB [Methyloversatilis universalis FAM5]
Length = 861
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/660 (67%), Positives = 561/660 (85%), Gaps = 4/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY IDLTE+A GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYCIDLTERAAAGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L+LD+A LLAG K+RGEFE+RLK +L E++ ++ II+FIDE+
Sbjct: 221 QRIVNEEVPETLKGKRVLVLDMAGLLAGAKFRGEFEERLKSVLNEVAKDEGRIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S +RL LI++EI+KL +Y++LE+
Sbjct: 401 IKMEIDSKPESMDKLDRRLIQLKIEREAVKKEKDEASIRRLGLIEEEIDKLHKEYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + S IKEEIEKVR+++ RK + +++L+YG L +LE LK+ +
Sbjct: 461 IWKAEKAQVVGSAHIKEEIEKVRVQMADLQRKGQFDKLAELQYGRLPQLEAQLKQAEKSG 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
P N LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RV+GQD
Sbjct: 521 DVKPQN----KLLRTEVGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEDRLHQRVIGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCKTL+ +F++EE +IRIDM
Sbjct: 577 EAVRLVSDAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKTLAEFLFDSEEHLIRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPYS+IL DE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYSVILFDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++KLAVM+EVK +FRPEFIN
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGSDYGVVKLAVMSEVKTFFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ +NI SIA IQL L+ +L K++M L++S AAL ++ GFD ++GAR
Sbjct: 757 RIDEVVVFHALDERNIQSIAKIQLAYLEKRLAKLDMGLQVSDAALSELGKAGFDPVFGAR 816
>gi|124266742|ref|YP_001020746.1| ATP-dependent protease (heat shock protein) [Methylibium
petroleiphilum PM1]
gi|124259517|gb|ABM94511.1| putative ATP-dependent protease (heat shock protein) [Methylibium
petroleiphilum PM1]
Length = 867
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/660 (66%), Positives = 567/660 (85%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL SK++L+LD+ALLLAG KYRGEFE+RLK +LKE++ ++ I+FIDE+
Sbjct: 220 QRIVAGEVPESLKSKRVLVLDMALLLAGAKYRGEFEERLKSVLKEVAQDEGQTIVFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+Y+EKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYVEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 340 PSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+KIEIDSKPE+MD+L+RRLIQLKIE EA+++E DE+S+KR LI+++I KLE + A+L++
Sbjct: 400 VKIEIDSKPEVMDRLDRRLIQLKIEREAVRKEKDEASQKRFGLIEEDIAKLEREAADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + S +KE+I+++R +I + RK D+ V++L+YG+L +LE+ LK+ K+
Sbjct: 460 VWKAEKATAQGSAHLKEDIDRIRTQIEEFKRKGDFNKVAELQYGKLPELEKKLKDAQAKE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + K TLL+T VGSEEIAE+V+R TGIPV+K++Q ER+KLL++E L +RVVGQD
Sbjct: 520 AKGGVD-GKPTLLRTLVGSEEIAEVVARATGIPVAKLMQGERQKLLDMEVKLHERVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVS++IRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE++IRIDM
Sbjct: 579 EAIRAVSDSIRRSRAGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDTEEAMIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I +M D E+I+ AV E+K +FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMAGQDPELIREAVWGELKTHFRPEFLN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ ++I +IA IQL L+ +L K+++ L++S AAL +++ +GFD ++GAR
Sbjct: 759 RIDETVVFHALDAQHIEAIAGIQLKALEARLAKLDIRLEVSAAALSELAKVGFDPVFGAR 818
>gi|121595501|ref|YP_987397.1| ATPase [Acidovorax sp. JS42]
gi|120607581|gb|ABM43321.1| ATPase AAA-2 domain protein [Acidovorax sp. JS42]
Length = 867
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 566/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTLDLTERARQGKLDPVIGRDDEIRRVIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP +L +K++L+LD+A LLAG KYRGEFE+RLK +LKE+++ + II+FIDE+
Sbjct: 219 QRIVEGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKSVLKEVAHEEGRIILFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ +YE HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE MDKLERR+IQLKIE EA+K+E DE+S+KRL LI++E+ +E +YA+LE+
Sbjct: 399 IKIEIDSKPESMDKLERRMIQLKIEREAMKKETDEASQKRLQLIEEELGNVEREYADLEE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + S+QI+++I+ +R +I+ RK D+ V++L+YG L +LE+ LKE +D
Sbjct: 459 VWKAEKASAQGSEQIRKDIDAIRTQIDDLKRKGDFNKVAELQYGTLPELEKRLKEA--QD 516
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ K LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL++E L +RVVGQD
Sbjct: 517 SEAGGTGTKHKLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLHMEEKLHERVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++EE ++RIDM
Sbjct: 577 EAISAVANAIRRSRSGLSDPNRPLGSFLFLGPTGVGKTELCKALAGFLFDSEEHLVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D E IK AV E+K +FRPEF+N
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDAEDIKEAVWGELKGHFRPEFLN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ K+I +IA IQL +L+ +L KM++ L++S AA+ +++ +GFD ++GAR
Sbjct: 757 RIDETVVFHGLDAKHIEAIARIQLRLLEARLAKMDLTLQVSPAAMGELAKVGFDPVFGAR 816
>gi|160900639|ref|YP_001566221.1| ATP-dependent chaperone ClpB [Delftia acidovorans SPH-1]
gi|333913063|ref|YP_004486795.1| ATP-dependent chaperone ClpB [Delftia sp. Cs1-4]
gi|160366223|gb|ABX37836.1| ATP-dependent chaperone ClpB [Delftia acidovorans SPH-1]
gi|333743263|gb|AEF88440.1| ATP-dependent chaperone ClpB [Delftia sp. Cs1-4]
Length = 870
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/660 (67%), Positives = 566/660 (85%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR+GKLDPVIGRDDEIRR+IQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 162 LKKYTMDLTERARIGKLDPVIGRDDEIRRSIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 221
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL +K++L LD+A LLAG KYRG+FE+RLK +LKE++ + II+FIDE+
Sbjct: 222 QRIVAGEVPESLKNKRVLSLDMAGLLAGAKYRGDFEERLKSVLKEVAQEEGRIILFIDEI 281
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 282 HTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVEE 341
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ +YE HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 342 PSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 401
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE+MDKLERR+IQLKIE EA+K+E DE+S+KRL LI++E+ LE +YA+LE+
Sbjct: 402 IKIEIDSKPEVMDKLERRMIQLKIEREAMKKEKDEASQKRLQLIEEELGSLEREYADLEE 461
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + S+QI++EI+++R++I + RK D+ V++L+YG+L LE+ L E +Q +
Sbjct: 462 VWKSEKASAQGSEQIRKEIDQIRIQIEELKRKGDFNKVAELQYGKLPSLEKQLNE-AQAN 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q A LL+T VG+EEIAE+VSR TGIPV+K++Q E++KLL +E+ L RVVGQD
Sbjct: 521 EQGQGGAPAHRLLRTHVGAEEIAEVVSRATGIPVAKMMQGEKDKLLRMEDRLHDRVVGQD 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ ++RIDM
Sbjct: 581 EAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLVRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 641 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + +K AV E+K +FRPEF+N
Sbjct: 701 DDGRLTDGQGRTVDFKNTVIVMTSNIGSLLIQAMVGEDYDDVKDAVWGELKNHFRPEFLN 760
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI SIA IQL +L+ +L KM++ L++S AL +++ +GFD ++GAR
Sbjct: 761 RIDETVVFHALDAKNIESIARIQLKLLERRLEKMDLALQVSDQALAELAKVGFDPVFGAR 820
>gi|383759106|ref|YP_005438091.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rubrivivax
gelatinosus IL144]
gi|381379775|dbj|BAL96592.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rubrivivax
gelatinosus IL144]
Length = 864
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 560/660 (84%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL K++L LD+A LLAG KYRGEFE+RLK +LKE+S ++ II+FIDEL
Sbjct: 220 QRIVNGEVPESLKDKRVLSLDMAGLLAGAKYRGEFEERLKAVLKEVSADEGRIILFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYVEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E T++ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 340 PSVEATVAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE MD+L+RR+IQLKIE EA+K+E DE+S++RL LI+ E+ KL+ +Y +LE+
Sbjct: 400 IKIEIDSKPEAMDRLDRRMIQLKIEREAVKKEQDEASQRRLGLIEDELLKLQREYNDLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + S Q+KEEI++++ +I + RK D+ V++L+YG+L +L++ LKE K+
Sbjct: 460 IWTAEKAQAQGSAQVKEEIDRIKFQIEELKRKGDFNRVAELQYGKLPELDKRLKEAQAKE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+T VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E L +RVVGQD
Sbjct: 520 AGKAKGGQGPQLLRTMVGAEEIAEVVSRATGIPVSKLMQGERDKLLQMEAKLHERVVGQD 579
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAISAV++AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F++E+ +IR+DM
Sbjct: 580 EAISAVADAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTELCKALASFLFDSEDHMIRVDM 639
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS+SRLIGAPPGY+GY+EGG LTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 640 SEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 699
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I +M E+++ AV EVK +FRPEF+N
Sbjct: 700 DDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMSGQPNEVVREAVWAEVKSHFRPEFLN 759
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ K+I +IA IQL L+ +L K+ M L++S AAL +++ +GFD ++GAR
Sbjct: 760 RIDETVVFHALDEKHIENIARIQLKALEARLEKLEMKLEVSPAALAELAKVGFDPVFGAR 819
>gi|257094822|ref|YP_003168463.1| ATP-dependent chaperone ClpB [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047346|gb|ACV36534.1| ATP-dependent chaperone ClpB [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 859
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/662 (66%), Positives = 564/662 (85%), Gaps = 8/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KY IDLTE+ARLGKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LSKYCIDLTERARLGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L KK++ LD+A LLAG KYRGEFE+RLK +LKEI+ + II+FIDEL
Sbjct: 221 QRIVNGEVPETLKGKKVMSLDMAALLAGAKYRGEFEERLKAVLKEIAQEEGQIIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RG+LHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALARGDLHCVGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGL+++YE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PTVESTIAILRGLRERYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKL+RR+IQLKIE EA+++E D++SKKR+ LI++E+ KLE +Y +L++
Sbjct: 401 IKMEIDSKPEVMDKLDRRMIQLKIEREAVRKERDDASKKRMHLIEEELVKLEREYNDLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL--KEKSQ 371
+WK EK+ ++ S IKEEI+K++L++ + R++ W V++++YG+L +LE L EKS
Sbjct: 461 VWKAEKSQVQGSAHIKEEIDKLKLELAQLQRENKWDKVAEIQYGKLPQLEAQLTVAEKS- 519
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
+ LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E + +RVVG
Sbjct: 520 -----GDGGQHNKLLRTEVGTEEIAEVVSRATGIPVSKMMQGEREKLLQMEERMHQRVVG 574
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
QDEA+ V+NAIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+ +F++EE +IR+
Sbjct: 575 QDEAVRLVANAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRV 634
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ
Sbjct: 635 DMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQ 694
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 611
+LDDGR+TD GRT++F+NT++VMTSNLGS I++M D ++IKLAVM EVK YFRPEF
Sbjct: 695 VLDDGRMTDGHGRTVDFKNTVVVMTSNLGSQMIQQMAGDDYQLIKLAVMGEVKTYFRPEF 754
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L+ ++I +IA IQL L+ +L ++ + L+++ +AL +++ GFD +YG
Sbjct: 755 INRIDEVVVFHALDEQHIKAIARIQLAYLEKRLAQLELRLEVADSALAEVATAGFDPVYG 814
Query: 672 AR 673
AR
Sbjct: 815 AR 816
>gi|237653311|ref|YP_002889625.1| ATP-dependent chaperone ClpB [Thauera sp. MZ1T]
gi|237624558|gb|ACR01248.1| ATP-dependent chaperone ClpB [Thauera sp. MZ1T]
Length = 860
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/660 (67%), Positives = 554/660 (83%), Gaps = 4/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KY +DLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LSKYCLDLTERARSGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG KYRGEFE+RLK +LKEI+ + II+FIDEL
Sbjct: 221 QRIVNDEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLKEIAQEEGRIIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVEATIAILRGLQEKYEIHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+S KRL LI+ E+ KL+ +Y +LE+
Sbjct: 401 IKMEIDSKPEVMDKLDRRMIQLKIEREAVKKEKDEASLKRLQLIEDELAKLQREYNDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + S IKEEI+ +R ++ + RK V++L+YG+L +LE L+ Q
Sbjct: 461 VWKAEKAKVAGSAHIKEEIDALRAQMAEYQRKGQLDKVAELQYGKLPQLEGQLRMAEQAG 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NA LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E+ L +RVVGQD
Sbjct: 521 ----QNAAPNKLLRTEVGAEEIAEVVSRATGIPVSKMMQGEREKLLKMEDKLHERVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCKTL+ +F++EE +IRIDM
Sbjct: 577 EAVRLVADAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKTLANFLFDSEEHLIRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL DE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I+ M D +IKLAVM EVK YFRPEFIN
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQAMAGDDYGVIKLAVMAEVKTYFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ K+I IA IQL L+ +L ++ M ++IS AAL +++ GFD ++GAR
Sbjct: 757 RIDEVVVFHALDEKHIAGIAKIQLQYLEKRLARLEMGMEISDAALAELATAGFDPVFGAR 816
>gi|167569691|ref|ZP_02362565.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
oklahomensis C6786]
Length = 865
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/673 (67%), Positives = 570/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSADAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +LE +YA+LE+IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG+L
Sbjct: 448 IRRLEREYADLEEIWTAEKAAVQGSAQLKEEIDKVRADITRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE K+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEARHKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 568 IEEKLHERVVGQNEAIDAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F+ EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDTEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQAMSGSSQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L +S++AL++
Sbjct: 748 GEVKQHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLARLHERLAKLDMALDVSESALEQ 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|167562511|ref|ZP_02355427.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
oklahomensis EO147]
Length = 865
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/673 (67%), Positives = 570/673 (84%), Gaps = 1/673 (0%)
Query: 2 QIYTLD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
Q+++ D E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGE
Sbjct: 148 QVHSADAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGE 207
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+
Sbjct: 208 PGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIA 267
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDA
Sbjct: 268 KDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDA 327
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+P
Sbjct: 328 ALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLP 387
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI++E
Sbjct: 388 DKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQKRLQLIEEE 447
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I +LE +YA+LE+IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG+L
Sbjct: 448 IRRLEREYADLEEIWTAEKAAVQGSAQLKEEIDKVRADITRLQREGKLEKVAELQYGKLP 507
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
+LE K+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREKLL+
Sbjct: 508 QLEARHKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLH 567
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
IE L +RVVGQ+EAI AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+
Sbjct: 568 IEEKLHERVVGQNEAIDAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAGF 627
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F+ EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEK
Sbjct: 628 LFDTEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEK 687
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM 600
A+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK AV
Sbjct: 688 AHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQAMSGSSQEEIKDAVW 747
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L +S++AL++
Sbjct: 748 GEVKQHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLARLHERLAKLDMALDVSESALER 807
Query: 661 ISNIGFDLIYGAR 673
I +G+D ++GAR
Sbjct: 808 IGKVGYDPLFGAR 820
>gi|300691677|ref|YP_003752672.1| chaperone [Ralstonia solanacearum PSI07]
gi|299078737|emb|CBJ51397.1| Chaperone [Ralstonia solanacearum PSI07]
gi|344169981|emb|CCA82355.1| chaperone [blood disease bacterium R229]
Length = 862
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/660 (67%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+LE+
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI+K RL+I K R+ V++L+YG+L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAAALKEEIDKTRLEIAKLQREGKLDKVAELQYGKLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 520 ASGQTQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLRMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G+SD +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGISDENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHMIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQMIQQMATEPLDVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++ +I SIA IQL L +L M++ L+I+ AA+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQTHIESIARIQLQRLAARLAHMDLTLEITDAAVAKLASAGYDPVFGAR 817
>gi|398804069|ref|ZP_10563072.1| ATP-dependent chaperone ClpB [Polaromonas sp. CF318]
gi|398095077|gb|EJL85427.1| ATP-dependent chaperone ClpB [Polaromonas sp. CF318]
Length = 866
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 562/660 (85%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYCMDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP+SL K++L LD+A LLAG K+RGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERLKTVLNELAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PTVEATIAILRGLQEKYEAHHGVQITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DE+S+KR LI++EI KL+ + ++L++
Sbjct: 399 IKIEMDSKPEVMDKLDRRLIQLQIEREAVRREKDEASQKRFELIEEEIAKLQKEISDLDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK S+ + EEI+++R +I + TRK D+ V++L+YG+L +LE+ LKE +Q
Sbjct: 459 IWQAEKAQALGSKDVMEEIDRIRFQIEEFTRKGDFNKVAELQYGKLPELEKRLKE-AQDS 517
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+N TLL+T+VG+EEIAE+V+R TGIPVSK++Q ER+KLL +E L +RVVGQD
Sbjct: 518 EASKGKSNAPTLLRTQVGAEEIAEVVARATGIPVSKLMQGERDKLLQMEGKLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ +IR+DM
Sbjct: 578 EAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRVDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK AV +E+K YFRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGKPTEEIKDAVTDELKNYFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI SIA IQL +L +L KM++ L +S+AA+ +++ +GFD ++GAR
Sbjct: 758 RIDETVVFHALDAKNIESIARIQLKVLIARLQKMDLTLDVSEAAIAELAKVGFDPVFGAR 817
>gi|344171531|emb|CCA84146.1| chaperone [Ralstonia syzygii R24]
Length = 862
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+LE+
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI+K RL+I K R+ V++L+YG+L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAAALKEEIDKTRLEIAKLQREGKLDKVAELQYGKLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 520 ASGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLRMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G+SD +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGISDENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHMIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQMIQQMATEPLDVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++ +I SIA IQL L +L M++ L+I+ AA+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQTHIESIARIQLQRLAARLAHMDLTLEITDAAVAKLASAGYDPVFGAR 817
>gi|71908340|ref|YP_285927.1| ATPase AAA [Dechloromonas aromatica RCB]
gi|71847961|gb|AAZ47457.1| AAA ATPase, central region:Clp, N terminal [Dechloromonas aromatica
RCB]
Length = 863
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/660 (67%), Positives = 559/660 (84%), Gaps = 3/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY IDLTE+A GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYCIDLTERAAQGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L KK+L+LD+A LLAG KYRGEFE+RLK +LKE++ ++ II+FIDEL
Sbjct: 221 QRIVNEEVPETLKGKKVLVLDMAGLLAGAKYRGEFEERLKAVLKEVAQDEGRIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVESTIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+SKKR LI++EI KL +Y++LE+
Sbjct: 401 IKMEIDSKPEVMDKLDRRIIQLKIEREAVKKEKDEASKKRFGLIEEEIAKLTKEYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK+ + S QIKEEI+ ++ I + R+ V++L+YG+L +LE LK ++K
Sbjct: 461 VWKAEKSAVLGSAQIKEEIDHLKADIARLQREGKLGEVAELQYGKLPQLEAQLK-AAEKA 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLLN+E+ L KRVVGQD
Sbjct: 520 GEGEGRKNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLNMEDRLHKRVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V +AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+ +F+ E+ +IRIDM
Sbjct: 578 EAVRLVGDAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAEFMFDAEDHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++M D +IK+AVM EVK YFRPEFIN
Sbjct: 698 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYGVIKVAVMAEVKNYFRPEFIN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ K+I IA IQL L+ +L ++ M + + +AL +++ GFD ++GAR
Sbjct: 758 RIDEVVVFHALDEKHIAGIAKIQLGYLEKRLAQLEMGIVVEDSALAELAQAGFDPVFGAR 817
>gi|375105822|ref|ZP_09752083.1| ATP-dependent chaperone ClpB [Burkholderiales bacterium JOSHI_001]
gi|374666553|gb|EHR71338.1| ATP-dependent chaperone ClpB [Burkholderiales bacterium JOSHI_001]
Length = 862
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/660 (67%), Positives = 564/660 (85%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP +L K++L+LD+A LLAG KYRGEFE+RLK +LKE++ ++ II+FIDEL
Sbjct: 219 QRIVAGEVPETLKDKRVLVLDMAGLLAGAKYRGEFEERLKAVLKEVAQDEGRIILFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEYR+Y+EKDAA ERRFQK++V+E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEYRKYVEKDAALERRFQKVMVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE+MD+L+RR+IQLKIE EA+K+E DE+S+KRL L+++E+ KL+ +Y +LE+
Sbjct: 399 IKIEIDSKPEVMDRLDRRMIQLKIEREAVKKERDEASQKRLGLLEEELLKLQREYNDLEQ 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + S Q+KEEI++ R +I + RK ++ V++L+YG L +LE+ LKE K+
Sbjct: 459 IWKAEKATAQGSAQVKEEIDRSRFQIEEYKRKGNFDKVAELQYGRLPELEKRLKEAQAKE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
A LL+T VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 519 AGKKGGAAP-QLLRTMVGAEEIAEVVSRATGIPVSKLMQGERDKLLKMEDKLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI+AVS+AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCK L+ +F++E+ +IR+DM
Sbjct: 578 EAITAVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKALANFLFDSEDHLIRVDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS+SR+IGAPPGY+GY+EGG LTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEYMEKHSVSRMIGAPPGYVGYDEGGALTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT++VMTSNLGS +I +M E I+ AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVVVMTSNLGSHQIMQMVGQSSEDIRDAVWAEVKEHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L++KNI SIA IQL IL+ +L +M M L++S AL +I+ +GFD ++GAR
Sbjct: 758 RIDETVVFHALDQKNIESIARIQLRILEQRLARMEMKLEVSAEALAEIAKVGFDPVFGAR 817
>gi|421888400|ref|ZP_16319495.1| Chaperone [Ralstonia solanacearum K60-1]
gi|378966210|emb|CCF96243.1| Chaperone [Ralstonia solanacearum K60-1]
Length = 862
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K +L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIVNGEVPESLKNKHVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+LE+
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI+KV+L+I + R+ V++L+YG+L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAAAVKEEIDKVKLEITRLQREGKLDKVAELQYGKLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 520 ASGQKSPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLRMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMAGESFDVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++ NI SIA IQL L +L M++ L +S AL K++++G+D ++GAR
Sbjct: 758 RIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLTLDVSDEALAKLASVGYDPVFGAR 817
>gi|430807090|ref|ZP_19434205.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
sp. HMR-1]
gi|429500631|gb|EKZ98994.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
sp. HMR-1]
Length = 862
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/660 (66%), Positives = 563/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTVDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L +K++L+LD+A LLAG KYRGEFE+RLK +L +++ ++ I+FIDE+
Sbjct: 220 QRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDVAKDEGQTIVFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HH VEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHKVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S+KRL LI++EI +LE +YA+L++
Sbjct: 400 IKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASRKRLELIEQEIIRLEKEYADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK + + +KEEIEK++L I + R+ V++L+YG+L +LE L+ ++ +
Sbjct: 460 IWRAEKGAAQGAAALKEEIEKIKLDITRLQREGKLDKVAELQYGKLPELEGKLQAATKAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPV+K++Q EREKLL +E+ L +RVVGQD
Sbjct: 520 ASEQKQQNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGEREKLLKMEDRLHQRVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GLSD +PYGSF+FLGPTGVGKTELCK LS +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGLSDENKPYGSFLFLGPTGVGKTELCKALSEFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPY++ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYAVILLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV EV+ +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSHIIQSMAGEPQEAVKGAVWQEVRTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++KNI SIA IQL L+ +L +M+M L +S+ AL+KI++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQKNIESIAKIQLKRLQVRLARMDMTLDVSERALEKIASAGYDPVFGAR 817
>gi|94310897|ref|YP_584107.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
metallidurans CH34]
gi|93354749|gb|ABF08838.1| ATP-dependent Clp protease, ATP-binding subunit ClpB (protein
disaggregation chaperone) [Cupriavidus metallidurans
CH34]
Length = 862
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/660 (66%), Positives = 563/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTVDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L +K++L+LD+A LLAG KYRGEFE+RLK +L +++ ++ I+FIDE+
Sbjct: 220 QRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDVAKDEGQTIVFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HH VEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHKVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S+KRL LI++EI +LE +YA+L++
Sbjct: 400 IKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASRKRLELIEQEIIRLEKEYADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK + + +KEEIEK++L I + R+ V++L+YG+L +LE L+ ++ +
Sbjct: 460 IWRAEKGAAQGAAALKEEIEKIKLDITRLQREGKLDKVAELQYGKLPELEGKLQAATKAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPV+K++Q EREKLL +E+ L +RVVGQD
Sbjct: 520 ASEQKQQNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGEREKLLKMEDRLHQRVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GLSD +PYGSF+FLGPTGVGKTELCK LS +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGLSDENKPYGSFLFLGPTGVGKTELCKALSEFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPY++ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYAVILLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E +K AV EV+ +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSHIIQSMAGEPQEAVKGAVWQEVRTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++KNI SIA IQL L+ +L +M+M L +S+ AL+KI++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQKNIESIAKIQLKRLQVRLARMDMTLDVSERALEKIASAGYDPVFGAR 817
>gi|337280035|ref|YP_004619507.1| heat shock protein [Ramlibacter tataouinensis TTB310]
gi|334731112|gb|AEG93488.1| Candidate heat shock protein [Ramlibacter tataouinensis TTB310]
Length = 874
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/660 (66%), Positives = 560/660 (84%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY +DLTE+ARLGKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYCLDLTERARLGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLTELAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA+K
Sbjct: 339 PTVEATIAILRGLQEKYEAHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE +D+L+RR+IQL+IE EA+++E DE+S+KRL LI+ EI KL + A+LE
Sbjct: 399 IKIEIDSKPEAIDRLDRRMIQLQIEREAMRKETDEASQKRLALIEDEIAKLRKEIADLED 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + S QI+EE+++VR +I + RK+D+ V++L+YG L +LER LKE +Q
Sbjct: 459 IWKAEKAAAQGSAQIREEMDRVRFQIEEFKRKADFNKVAELQYGRLPELERKLKE-AQDA 517
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
A K LL+T+VG+EEIAE+V+R TGIPVSK++Q EREKLL +E L +RVVGQD
Sbjct: 518 EAGKAKAGKAQLLRTQVGAEEIAEVVARATGIPVSKLMQGEREKLLQMEERLHQRVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI+AV+NAIRRSRSGL+D RP GSF+FLGPTGVGKTELCK L+ +F++EE +IR+DM
Sbjct: 578 EAIAAVANAIRRSRSGLADPNRPTGSFLFLGPTGVGKTELCKALATFLFDSEEHLIRVDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHHDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E +K AV +E+K +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNIGSHMIQAMVGRPYEDVKEAVWDELKNHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ +I IA IQL +L+ +L KM++ L++S+AAL++++ +GFD ++GAR
Sbjct: 758 RIDETVVFHGLHAAHIARIARIQLGVLEQRLAKMDLTLQVSEAALEELAKVGFDPVFGAR 817
>gi|241766421|ref|ZP_04764297.1| ATP-dependent chaperone ClpB [Acidovorax delafieldii 2AN]
gi|241363400|gb|EER58901.1| ATP-dependent chaperone ClpB [Acidovorax delafieldii 2AN]
Length = 868
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/660 (66%), Positives = 560/660 (84%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY IDLTE+AR+GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYCIDLTERARIGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERLKTVLNELAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA+K
Sbjct: 339 PTVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR LI++EI L+ + A+L++
Sbjct: 399 IKIEIDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLIEEEIASLQKEIADLDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK + SQQ++E++E+V+ +I + RK D+ V++L+YG+L LE+ LKE K+
Sbjct: 459 IWQSEKAQAQGSQQVREQVEQVKQQIEELKRKGDFNKVAELQYGKLPDLEKQLKEAQAKE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL +E L +RVVGQ+
Sbjct: 519 EGKDGTSAPNRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLQMETKLHERVVGQE 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 579 EAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + IK AV E+K +FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDSDDIKEAVWGELKNHFRPEFLN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ +I +IA IQL +L+++L KM++ L +S AAL +++ +GFD ++GAR
Sbjct: 759 RIDETVVFHALDAAHIEAIARIQLQLLESRLAKMDLALDVSPAALAELAKVGFDPVFGAR 818
>gi|17546054|ref|NP_519456.1| ATP-dependent protease [Ralstonia solanacearum GMI1000]
gi|54035873|sp|Q8XZR0.1|CLPB_RALSO RecName: Full=Chaperone protein ClpB
gi|17428350|emb|CAD15037.1| probable chaperone clpb protein [Ralstonia solanacearum GMI1000]
Length = 862
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+LE+
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI++V+L+I + R+ V++L+YG L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAAAVKEEIDRVKLEIARLQREGKLDKVAELQYGRLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 520 ASGQRPPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLRMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMASESPDVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++ +I SIA IQL L +L M++ L+IS A+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQGHIESIARIQLQRLAARLAHMDLTLEISDPAVAKLASAGYDPVFGAR 817
>gi|445497963|ref|ZP_21464818.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Janthinobacterium sp. HH01]
gi|444787958|gb|ELX09506.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Janthinobacterium sp. HH01]
Length = 862
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/660 (68%), Positives = 565/660 (85%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARSGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP+SL K++L LD+A L+AG KYRGEFE+RLK +LKE++ ++ I+FIDE+
Sbjct: 221 QRIVNNEVPDSLKGKRVLSLDMAALVAGAKYRGEFEERLKSVLKELAMDEGQTIVFIDEM 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV+E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ KYE+HH V I+D AI+AA+ELS+RYI+DRF+PDKAIDLIDEAA+K
Sbjct: 341 PSVEATIAILRGLQDKYELHHKVAISDAAIIAAAELSHRYITDRFLPDKAIDLIDEAASK 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE+MDKLERRLIQLKIE EA+K+E DE S++RL LI +EI +L+ + + E+
Sbjct: 401 IKIEIDSKPEVMDKLERRLIQLKIEKEAVKKEKDEGSRRRLDLIDEEILRLQRELNDYEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
I K EK +++ S IKEEIE+++L++ +ATR S+WQ VS+L+YG L +LE LK+ +
Sbjct: 461 ILKAEKAVVQGSTHIKEEIERIKLQMEQATRDSNWQRVSELQYGRLPELEAQLKQAESVN 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
++ A K LL+T+VG+EEIAE+VSR TGIPVS+++Q ER+KLL+IE L +RVVGQD
Sbjct: 521 LK-AGEAAKPKLLRTEVGAEEIAEVVSRATGIPVSRMMQGERDKLLHIEEKLHERVVGQD 579
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI+AVS+AIRRSR+GLSD RPYGSFMFLGPTGVGKTEL K L+ +F+ EES+IRIDM
Sbjct: 580 EAIAAVSDAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTELTKALAGFLFDTEESMIRIDM 639
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ L
Sbjct: 640 SEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQAL 699
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+I+MTSNLGS KI+ ME D ++KLAVM EV+ +FRPEFIN
Sbjct: 700 DDGRMTDGQGRTVDFKNTVIIMTSNLGSHKIQAMEDSDPGVVKLAVMAEVRSHFRPEFIN 759
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I+VF L+ KNI +IA IQL IL+ +L KM M L I++AAL KI+ G+D +YGAR
Sbjct: 760 RIDEIVVFHGLDEKNIGAIAKIQLAILEQRLAKMEMTLTITEAALHKIAEAGYDPVYGAR 819
>gi|386333685|ref|YP_006029855.1| chaperone [Ralstonia solanacearum Po82]
gi|334196134|gb|AEG69319.1| chaperone [Ralstonia solanacearum Po82]
Length = 862
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 560/660 (84%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+LE+
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI+KV+L+I + R+ V++L+YG L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAAAVKEEIDKVKLEITRLQREGKLDKVAELQYGRLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 520 ASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLRMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMAGESFDVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++ NI SIA IQL L +L M++ L+IS A+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLTLEISDEAVAKLASAGYDPVFGAR 817
>gi|237748625|ref|ZP_04579105.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes OXCC13]
gi|229379987|gb|EEO30078.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes OXCC13]
Length = 864
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/660 (68%), Positives = 570/660 (86%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP SL K++L LD+A LLAG K+RGEFE+RLK +L E++ ++ I+FIDE+
Sbjct: 221 QRIVNDEVPESLKGKRVLALDMAALLAGAKFRGEFEERLKAVLNELAKDEGQDIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKI+V+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIMVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYE+HHGVEITDPAI+AA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PTVEDTIAILRGLQEKYELHHGVEITDPAIIAAAELSQRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+S KRL LI++EINKLE +YA+ ++
Sbjct: 401 IKMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDEASLKRLALIEEEINKLEKEYADYDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
I K EK ++ S+ IKEEIEKVRL++++A R+ D+Q +S+L YG+L +LE+ L QK+
Sbjct: 461 ILKAEKAGVEGSKHIKEEIEKVRLEMDEAKRRGDFQKMSELMYGKLPELEKALAADDQKE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+L + K LL+T V +EEIAE+VSR TGIPVSK++Q ER+KLL++E+ L KRVVGQ
Sbjct: 521 TKLETDHPK--LLRTHVDAEEIAEVVSRATGIPVSKMMQGERDKLLHMEDYLHKRVVGQH 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVS AIRRSR+GLSD RPYGSFMFLGPTGVGKTELCK L++ +F+ E+++IRIDM
Sbjct: 579 EAIVAVSEAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTELCKALASFLFDTEDAMIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +++++K+AVM+EV+ +FRPEFIN
Sbjct: 699 DDGRMTDGQGRTVDFKNTVIVMTSNLGSHLIQSMTGSEQDLVKVAVMDEVRKHFRPEFIN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
R+D+I+VF L+ KNI +IA IQL +L +L KM M L +S+ AL KI+ GFD ++GAR
Sbjct: 759 RVDEIVVFHALDEKNIGAIAKIQLELLNKRLEKMEMSLDVSEKALHKIAEAGFDPLFGAR 818
>gi|121610528|ref|YP_998335.1| ATPase [Verminephrobacter eiseniae EF01-2]
gi|121555168|gb|ABM59317.1| ATPase AAA-2 domain protein [Verminephrobacter eiseniae EF01-2]
Length = 867
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/666 (65%), Positives = 563/666 (84%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E G L KY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EGQRGALAKYCLDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+ GEVP SL K++L LD+A LLAG K+RGEFE+RLK +L E++ +Q I
Sbjct: 213 IVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERLKAVLTELAKDQGQTI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 VFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
KILV+EP +E +I+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 333 KILVDEPTVEASIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRYITDRFLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+KIKIE+DSKPE+MDKL+RRLIQ++IE EA++RE DE+S+KRL LI++EI +L+ +
Sbjct: 393 DEAASKIKIEMDSKPEVMDKLDRRLIQVQIEREAVRREKDEASQKRLALIEEEITRLQKE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A+ ++IW+ EK + S Q++E I+K+R +I + TRK D+ V++L+YG+L LE+ L+
Sbjct: 453 IADYDEIWQAEKAQAQGSAQLREAIDKLRFQIEEFTRKGDFNKVAELQYGQLPALEKQLR 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ ++ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL +E L +
Sbjct: 513 QAQAQEAGKDGAPATRRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLQMEARLHQ 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEAI+AV+NAIRRSRSGLSD +RP GSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAIAAVANAIRRSRSGLSDPQRPSGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE++KA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVDKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+LDDGRLTD++GRT++F+NT+IVMTSN+GS I+ M D + IK AV E+K +F
Sbjct: 693 VLLQVLDDGRLTDSQGRTVDFKNTVIVMTSNIGSPLIQAMVGQDPQDIKDAVWGELKNHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID+ +VF L+ ++I SIA IQL L+++L KM++ L++S AA+ +++ +GFD
Sbjct: 753 RPEFLNRIDETVVFHALDAQHIASIARIQLQSLQSRLAKMDLQLQVSDAAVAELAKVGFD 812
Query: 668 LIYGAR 673
++GAR
Sbjct: 813 PVFGAR 818
>gi|332529046|ref|ZP_08405011.1| ATPase [Hylemonella gracilis ATCC 19624]
gi|332041490|gb|EGI77851.1| ATPase [Hylemonella gracilis ATCC 19624]
Length = 874
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/661 (67%), Positives = 562/661 (85%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLT +AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTLDLTARARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL K++L+LD+A LLAG K+RGEFE+RLK +LKE++ ++ II+FIDE+
Sbjct: 220 QRIVNGEVPESLRDKRVLVLDMAGLLAGAKFRGEFEERLKAVLKEVAQDEGRIILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVEE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 340 PTVEQTIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+S+KRL LI++EI KL+ + A+LE+
Sbjct: 400 IKIEIDSKPEVMDKLDRRMIQLKIEREAMKKETDEASQKRLALIEEEIGKLQKEAADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + Q ++EEIEK++ +I + TRK D+ V++L+YG+L +LE+ L E +
Sbjct: 460 IWKLEKAQAQGGQHLREEIEKLKGQIEELTRKGDFNRVAELQYGKLPELEKRLNEVQASE 519
Query: 374 IQLPNNANKFT-LLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+K LL+T VG+EEIAE+VSR TGIPV+K++Q E++KLL +E+ L +RVVGQ
Sbjct: 520 AAGAGGGSKTPRLLRTLVGAEEIAEVVSRATGIPVAKMMQGEKDKLLRMEDKLHERVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
+EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++ + ++RID
Sbjct: 580 EEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSVDHLVRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + +K AV E+K YFRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFKNTVIVMTSNIGSQLIQNMAGRSYDDVKDAVWGELKNYFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L+ NI SIA IQL L+++L+KM + L +S AL +++ +GFD ++GA
Sbjct: 760 NRVDETVVFHGLDAANIASIAKIQLQALQDRLVKMELSLHVSDKALAELAKVGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>gi|89900705|ref|YP_523176.1| ATPase [Rhodoferax ferrireducens T118]
gi|89345442|gb|ABD69645.1| ATPase AAA-2 [Rhodoferax ferrireducens T118]
Length = 870
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/663 (66%), Positives = 558/663 (84%), Gaps = 3/663 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY IDLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYCIDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP+SL K++L LD+A LLAG K+RGEFE+RLK +LK+++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPDSLKGKRVLSLDMASLLAGAKFRGEFEERLKNVLKDLAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQKILV E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQKILVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ KYE HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA+K
Sbjct: 339 PTVEDTIAILRGLQAKYETHHGVQITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DE+S+KR LI++EI +L+ + A+L++
Sbjct: 399 IKIELDSKPEVMDKLDRRLIQLQIEREAVRREKDEASQKRFGLIEEEIVRLQKEIADLDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + S+ I EEIEKVR +I + TRK D+ +L+YG+L LE+ LK+ ++
Sbjct: 459 IWKAEKAQAQGSKAIMEEIEKVRFQIEELTRKGDFNRAGELQYGKLPGLEKQLKDAQDQE 518
Query: 374 ---IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVV 430
+ + + LL+T VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E L +RVV
Sbjct: 519 AGRAKTAKDGGRAQLLRTMVGAEEIAEVVSRATGIPVSKMMQGERDKLLLMEAKLHQRVV 578
Query: 431 GQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIR 490
GQDEAI+AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ ++R
Sbjct: 579 GQDEAITAVANAIRRSRAGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLVR 638
Query: 491 IDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILL 550
IDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LL
Sbjct: 639 IDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLL 698
Query: 551 QILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPE 610
Q+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D E IK AV E+K YFRPE
Sbjct: 699 QVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQMIQSMVGQDSEDIKDAVTAELKNYFRPE 758
Query: 611 FINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIY 670
F+NRID+ +VF L+ +I IA IQ+ +L+ +L KM + L++S AAL +++ +GFD ++
Sbjct: 759 FLNRIDETVVFHALDASHIAKIAAIQIQVLQERLAKMELTLEVSPAALAELAKVGFDPVF 818
Query: 671 GAR 673
GAR
Sbjct: 819 GAR 821
>gi|347821362|ref|ZP_08874796.1| ATPase [Verminephrobacter aporrectodeae subsp. tuberculatae At4]
Length = 869
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/666 (65%), Positives = 558/666 (83%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E G L KY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EGQRGALTKYCMDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+ GEVP SL K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I
Sbjct: 213 IVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLNELAKDEGQTI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYR+YIEKDAA ERRFQ
Sbjct: 273 VFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
KILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 333 KILVGEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRYITDRFLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+KIKIE+DSKPE MD+L+RRLIQL+IE EA++RE DESS+KR LI++EI KL+ +
Sbjct: 393 DEAASKIKIEMDSKPEAMDRLDRRLIQLQIEREAVRREKDESSQKRFALIEQEITKLQKE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A+ ++IW+ EK + S Q++E I+K+R +I + TRK D+ V++L+YG+L +LE+ LK
Sbjct: 453 IADYDEIWQAEKAQAQGSAQVREAIDKLRFQIEEFTRKGDFNKVAELQYGKLPELEKQLK 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ ++ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL +E L +
Sbjct: 513 QAQAQEAGKDGVPAARRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLQMEARLHE 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F+ E+
Sbjct: 573 RVVGQDEAIAAVANAIRRSRSGLSDPSRPTGSFLFLGPTGVGKTELCKALAGFLFDGEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGG+LTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGHLTEAVRRKPYSVLLLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M D + IK AV E++ F
Sbjct: 693 VLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQAMVGQDPDDIKEAVWGELRARF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID+ ++F L+ ++I SIA IQL L+++L KM++DL++S AAL +++ +GFD
Sbjct: 753 RPEFLNRIDETVLFHALDAQHIASIARIQLQGLQSRLAKMDLDLQVSDAALAELAKVGFD 812
Query: 668 LIYGAR 673
++GAR
Sbjct: 813 PVFGAR 818
>gi|260219645|emb|CBA26490.1| Chaperone protein clpB [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 863
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/660 (66%), Positives = 555/660 (84%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY IDLTE+AR+GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYCIDLTERARMGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP+SL K++L LD+A LLAG K+RGEFE+RLK +LK+++ ++ I+FIDEL
Sbjct: 219 QRIVEGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERLKNVLKDLAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV E
Sbjct: 279 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGL+++YEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA+K
Sbjct: 339 PTVEATIAILRGLKERYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MDKL+RRLIQL+IE EA+K+E DE+S KR LI +EIN L+ + A+L++
Sbjct: 399 IKIELDSKPEVMDKLDRRLIQLQIEREAVKKEKDEASLKRFELINEEINSLQKEIADLDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + S Q++EEI+K+R +I TRK D V++L+YG+L +LE+ LKE ++
Sbjct: 459 IWKAEKATAQGSAQVREEIDKLRTQIESLTRKGDLAKVAELQYGKLPELEKRLKEAQDQE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E L RVVGQ+
Sbjct: 519 AGKAAAGGANRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLQMEGKLRDRVVGQE 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI+AVSNAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++EE ++RIDM
Sbjct: 579 EAIAAVSNAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEEHLVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY+++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYAVLLLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D E +K AV E+K +FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIVMTSNIGSQLIQSMVGQDYEDVKEAVTGELKNHFRPEFLN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ NI SIA IQL L +L KM++ L +S AA+ +++ +GFD ++GAR
Sbjct: 759 RIDETVVFHSLDAANIASIAKIQLATLMARLAKMDLTLAVSDAAVAELAKVGFDPVFGAR 818
>gi|83748548|ref|ZP_00945568.1| ClpB protein [Ralstonia solanacearum UW551]
gi|207743315|ref|YP_002259707.1| chaperone clpb protein [Ralstonia solanacearum IPO1609]
gi|83724756|gb|EAP71914.1| ClpB protein [Ralstonia solanacearum UW551]
gi|206594712|emb|CAQ61639.1| chaperone clpb protein [Ralstonia solanacearum IPO1609]
Length = 862
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+LE+
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI+KV+L+I + R+ V++L+YG+L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAATVKEEIDKVKLEITRLQREGKLDKVAELQYGKLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 520 ASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLRMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMAGESFDVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++ NI SIA IQL L +L M++ L+IS A+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLMLEISDEAVAKLASAGYDPVFGAR 817
>gi|351731245|ref|ZP_08948936.1| ATPase [Acidovorax radicis N35]
Length = 868
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/663 (66%), Positives = 565/663 (85%), Gaps = 2/663 (0%)
Query: 12 GYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEG 71
G L KY +DLTE+AR+GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEG
Sbjct: 157 GALAKYCMDLTERARIGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG 216
Query: 72 LAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFID 131
LAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FID
Sbjct: 217 LAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLSELAKDEGQTIVFID 276
Query: 132 ELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILV 191
ELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV
Sbjct: 277 ELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILV 336
Query: 192 EEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAA 251
EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA
Sbjct: 337 GEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAA 396
Query: 252 AKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANL 311
+KIKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DESS+KR LI++EI KL+ + A+
Sbjct: 397 SKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRREKDESSQKRFALIEEEITKLQKEIADY 456
Query: 312 EKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKE-KS 370
++IW+ EK + S ++E I+K++ +I + TRK D+ V++L+YG+L LER LKE ++
Sbjct: 457 DEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVAELQYGKLPDLERQLKEAQA 516
Query: 371 QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVV 430
Q+D + A + LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL +E L +RVV
Sbjct: 517 QEDGKDGAPAAR-RLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLQMETKLHERVV 575
Query: 431 GQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIR 490
GQ EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ +IR
Sbjct: 576 GQQEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIR 635
Query: 491 IDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILL 550
IDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LL
Sbjct: 636 IDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLL 695
Query: 551 QILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPE 610
Q+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D E IK AV E+K +FRPE
Sbjct: 696 QVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDSEDIKEAVWGELKNHFRPE 755
Query: 611 FINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIY 670
F+NRID+ +VF L+ ++I SIA IQL +L+ +L KM+++L++S AAL +++ +GFD ++
Sbjct: 756 FLNRIDETVVFHALDAQHIASIAKIQLQLLQTRLAKMDLELQVSDAALAELAKVGFDPVF 815
Query: 671 GAR 673
GAR
Sbjct: 816 GAR 818
>gi|299067390|emb|CBJ38589.1| Chaperone [Ralstonia solanacearum CMR15]
Length = 862
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/660 (66%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGALDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+LE+
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI++V+L+I + R+ V++L+YG L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAAAVKEEIDRVKLEIARQQREGKLDKVAELQYGRLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L +RVVGQD
Sbjct: 520 ASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMASEPPDVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++ +I SIA IQL L +L M++ L+IS A+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQDHIESIARIQLQRLAARLAHMDLMLEISDPAVAKLASAGYDPVFGAR 817
>gi|237745846|ref|ZP_04576326.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes HOxBLS]
gi|229377197|gb|EEO27288.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes HOxBLS]
Length = 864
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/660 (67%), Positives = 570/660 (86%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTMDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP SL K++L LD+A LLAG K+RGEFE+RLK +L E++ ++ I+FIDE+
Sbjct: 221 QRIVNNEVPESLKGKRVLALDMAALLAGAKFRGEFEERLKAVLNELAKDEGQDIVFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKI+V+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIMVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYEVHHGVEI+DPAI+AA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEDTIAILRGLQEKYEVHHGVEISDPAIIAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MD+L+RR+IQLKIE EA+K+E DE+S+KRL L+++EI KLE +YA+ ++
Sbjct: 401 IKMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDEASRKRLALLEEEIAKLEKEYADYDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
I K EK ++ S+ IKEEIEK+RL+I +A R+ D+Q +S+L YG L +LE+ L ++ KD
Sbjct: 461 ILKAEKAGVEGSKHIKEEIEKIRLQIEEAKRRGDYQKMSELMYGRLPELEKALAMENDKD 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+L + + LL+T+V +EEIAE+VSR TGIPVSK++Q ER+KLL++E+ L KRVVGQ
Sbjct: 521 ARLEHAHPR--LLRTEVDAEEIAEVVSRATGIPVSKMMQGERDKLLHMEDELHKRVVGQH 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVS AIRRSR+GLSD RPYGSFMFLGPTGVGKTELCK L+ +F+ E+++IRIDM
Sbjct: 579 EAIVAVSEAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTELCKALAGFLFDTEDAMIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I+ M D+ ++K+AVM EV+ +FRPEFIN
Sbjct: 699 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMGGSDQGLVKMAVMEEVRKHFRPEFIN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
R+D+I+VF L+ KNI +IA IQL ++ +L KM+M +++S AAL KI+ GFD ++GAR
Sbjct: 759 RVDEIVVFHALDEKNIGAIARIQLELVNRRLQKMDMSMEVSDAALHKIAEAGFDPLFGAR 818
>gi|398808737|ref|ZP_10567597.1| ATP-dependent chaperone ClpB [Variovorax sp. CF313]
gi|398087089|gb|EJL77687.1| ATP-dependent chaperone ClpB [Variovorax sp. CF313]
Length = 873
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/660 (66%), Positives = 560/660 (84%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY +DLTE+ARLGKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYCLDLTERARLGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL K++L LD+A LLAG K+RGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERLKTVLNELAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKI+V E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KRL LI+ EI KL+ + A+ ++
Sbjct: 399 IKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRLGLIEGEIEKLQKEIADYDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK + S Q++E+++K++ +I + RK D+ V++L+YG+L LE+ LKE +
Sbjct: 459 IWQAEKAQAQGSAQVREDVDKIKFQIEEWKRKGDFNKVAELQYGQLPALEKRLKEAEASE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
++ TLL+T+VGSEEIAE+V+R TGIPV+K++Q ER+KLL +E+ L +RVVGQD
Sbjct: 519 AS-KGKSSAPTLLRTQVGSEEIAEVVARATGIPVAKLMQGERDKLLVMEDKLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ +IRIDM
Sbjct: 578 EAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK AV +E+K YFRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQAMVGKPSEEIKEAVWDELKNYFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI SIA IQL +L+ +L KM++ L++S AAL +I+ +GFD ++GAR
Sbjct: 758 RIDETVVFHALDAKNIESIAAIQLKVLQARLAKMDLGLEVSPAALAEIAKVGFDPVFGAR 817
>gi|300704290|ref|YP_003745893.1| chaperone [Ralstonia solanacearum CFBP2957]
gi|299071954|emb|CBJ43284.1| Chaperone [Ralstonia solanacearum CFBP2957]
Length = 862
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+LE+
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI+KV+L+I + R+ V++L+YG+L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAATVKEEIDKVKLEITRLQREGKLDKVAELQYGKLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L +RVVGQD
Sbjct: 520 ASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G+SD +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGISDENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMVGESFDVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++ NI SIA IQL L +L M++ L+IS A+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLTLEISDEAVAKLASAGYDPVFGAR 817
>gi|319792779|ref|YP_004154419.1| ATP-dependent chaperone clpb [Variovorax paradoxus EPS]
gi|315595242|gb|ADU36308.1| ATP-dependent chaperone ClpB [Variovorax paradoxus EPS]
Length = 873
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/660 (66%), Positives = 560/660 (84%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+ARLGKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTMDLTERARLGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP+SL K++L LD+A LLAG K+RGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPDSLKGKRVLSLDMASLLAGAKFRGEFEERLKTVLNELAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKI+V E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR LI+ EI KL+ + A+ ++
Sbjct: 399 IKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLIEDEIAKLQKEIADYDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK + S I+EEIEK++ +I + RK D+ +++L+YG+L LE+ LKE +
Sbjct: 459 IWQAEKAQAQGSAHIREEIEKLKTEIKEWERKGDFNKLAELQYGQLPALEKRLKEAEASE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
++ TLL+T+VG+EEIAE+V+R TGIPV+K++Q ER+KLL +E+ L +RVVGQD
Sbjct: 519 AS-KGKSSAPTLLRTQVGAEEIAEVVARATGIPVAKLMQGERDKLLVMEDKLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ +IRIDM
Sbjct: 578 EAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK AV +E+K YFRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQAMVGKPSEEIKEAVWDELKNYFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI SIA IQL +LK +L KM++ L++S AAL +I+ +GFD ++GAR
Sbjct: 758 RIDETVVFHALDAKNIESIAAIQLKVLKARLAKMDLGLEVSPAALAEIAKVGFDPVFGAR 817
>gi|187928299|ref|YP_001898786.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12J]
gi|187725189|gb|ACD26354.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12J]
Length = 862
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/660 (66%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEMARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+L++
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI+K++L+I K R+ + V++L+YG+L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAAALKEEIDKIKLEITKLQREGKLEKVAELQYGKLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPV+K++ EREKLL +E+ L +RVVGQD
Sbjct: 520 SAGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMTGEREKLLKMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMATEPADVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+++NI SIA IQL L +L M++ L+IS A+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQRNIESIARIQLKRLSARLAHMDLALEISDEAVAKLASAGYDPVFGAR 817
>gi|365093659|ref|ZP_09330720.1| ATPase [Acidovorax sp. NO-1]
gi|363414143|gb|EHL21297.1| ATPase [Acidovorax sp. NO-1]
Length = 868
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/666 (65%), Positives = 560/666 (84%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E G L KY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EGQRGALAKYCLDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I
Sbjct: 213 IVEGLAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLNELAKDEGQTI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 VFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
KILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLI
Sbjct: 333 KILVGEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+KIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DESS+KR LI++EI KL+ +
Sbjct: 393 DEAASKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDESSQKRFALIEEEITKLQKE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A+ ++IW+ EK + S ++E I+K++ +I + TRK D+ V++L+YG+L LE+ LK
Sbjct: 453 IADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVAELQYGKLPDLEKQLK 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E ++ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL +E L +
Sbjct: 513 EAQAQEAGKDGAPATRRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLQMEAKLHE 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQQEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + IK AV E+K +F
Sbjct: 693 VLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDSDDIKEAVWGELKNHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID+ +VF L+ ++I SIA IQL +L+ +L KM+++L++S AAL +++ +GFD
Sbjct: 753 RPEFLNRIDETVVFHALDAQHIASIAKIQLQLLQTRLAKMDLELQVSDAALAELAKVGFD 812
Query: 668 LIYGAR 673
++GAR
Sbjct: 813 PVFGAR 818
>gi|372488803|ref|YP_005028368.1| ATP-dependent chaperone ClpB [Dechlorosoma suillum PS]
gi|359355356|gb|AEV26527.1| ATP-dependent chaperone ClpB [Dechlorosoma suillum PS]
Length = 861
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/662 (66%), Positives = 562/662 (84%), Gaps = 7/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY +DLTE+A GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYCVDLTERAAQGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L KK+L+LD+A LLAG KYRGEFE+RLK +L +I+ ++ II+FIDE+
Sbjct: 221 QRIVNDEVPETLKGKKVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKDEGRIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+SKKR LI+ EI KL+ +Y++LE+
Sbjct: 401 IKMEIDSKPEVMDKLDRRIIQLKIEREAVKKEKDEASKKRFGLIEDEIAKLQKEYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK--EKSQ 371
+WK EK + + +KEEI+K++ +I + R+ + V++L+YG+L +LE LK EK+
Sbjct: 461 VWKAEKAQVHGAAHVKEEIDKIKAEIARLQREGKLEKVAELQYGKLPQLEAQLKVAEKAS 520
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
+ Q N LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVG
Sbjct: 521 EGGQQQNK-----LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEDRLHQRVVG 575
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
QDEA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L+ +F++E+ +IRI
Sbjct: 576 QDEAVRLVSDAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAEFLFDSEDHLIRI 635
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSEF+EKHS++RLIGAPPGY+GYEEGG LTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ
Sbjct: 636 DMSEFMEKHSVARLIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQ 695
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 611
+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKLAVM EVK YFRPEF
Sbjct: 696 VLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGDDYQLIKLAVMGEVKSYFRPEF 755
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+ +VF L+ KNI +IA IQL L+ ++ ++ M L+++ +AL +++ GFD I+G
Sbjct: 756 INRIDEAVVFHSLDEKNIRNIARIQLGYLEKRVAQLEMRLEVADSALDELAKAGFDPIFG 815
Query: 672 AR 673
AR
Sbjct: 816 AR 817
>gi|407940132|ref|YP_006855773.1| ATPase [Acidovorax sp. KKS102]
gi|407897926|gb|AFU47135.1| ATPase [Acidovorax sp. KKS102]
Length = 868
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/666 (65%), Positives = 562/666 (84%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E G L KY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EGQRGALAKYCLDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I
Sbjct: 213 IVEGLAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLNELAKDEGQTI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 VFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
KILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 333 KILVGEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRYITDRFLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA+++E DESS+KR LI++EI +L+ +
Sbjct: 393 DEAASKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRKEKDESSQKRFALIEEEITRLQKE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A+ ++IW+ EK + S ++E I+K++ +I + TRK D+ V++L+YG+L +LE+ LK
Sbjct: 453 IADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVAELQYGKLPELEKQLK 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E ++ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL +E L +
Sbjct: 513 EAQAQEAGKDGAPAARRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLQMEAKLHE 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQNEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + IK AV E+K +F
Sbjct: 693 VLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDSDDIKEAVWGELKNHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID+ +VF L+ ++I SIA IQL +L+++L KM+++L++S AAL +++ +GFD
Sbjct: 753 RPEFLNRIDETVVFHALDAQHIASIAKIQLQLLQSRLAKMDLELQVSDAALAELAKVGFD 812
Query: 668 LIYGAR 673
++GAR
Sbjct: 813 PVFGAR 818
>gi|393778254|ref|ZP_10366533.1| ATP-dependent chaperone ClpB [Ralstonia sp. PBA]
gi|392714720|gb|EIZ02315.1| ATP-dependent chaperone ClpB [Ralstonia sp. PBA]
Length = 861
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/694 (63%), Positives = 577/694 (83%), Gaps = 11/694 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTERARSGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +++ ++ I+FIDE+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLSDVAKDEGQTIVFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVEE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PTVEATIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MD+L+RR+IQL+IE EA+K+E DE+S KRL LI++EI +L+ +YA+L++
Sbjct: 400 IKMEIDSKPEVMDRLDRRVIQLQIEREAVKKETDEASMKRLDLIEQEIARLQKEYADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK + + +KEEI++++L+I + R+ V++L+Y +L +LE LK + +
Sbjct: 460 IWRAEKGAAQGTASLKEEIDRIKLEIVRLQREGKLDKVAELQYAKLPELEGKLKAANAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q A + LL+T+VG+EEIAE+VSR TGIPV+K++ EREKLL +E+ L +RVVGQD
Sbjct: 520 TQ---GATQNKLLRTQVGAEEIAEVVSRATGIPVAKMMTGEREKLLQMEDRLHQRVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L++ +F++EE +IRIDM
Sbjct: 577 EAVRLVSDAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKALASFLFDSEEHLIRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+ M E IK AV EVK +FRPEF+N
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIQAMTNEPYEAIKGAVWQEVKEHFRPEFLN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L + +I +IA IQL L+++L KM+M L IS AAL +++ G+D ++GAR
Sbjct: 757 RIDEVVVFHALGQDHITNIARIQLQRLRDRLAKMDMSLDISDAALTHLASAGYDPVFGAR 816
Query: 674 DVHGCKKSLSILLKKIHKKSPEANFIFLGDLINK 707
+ K+++ + H ++P + I G L+ K
Sbjct: 817 PL---KRAI-----QQHIENPLSRLILEGKLVPK 842
>gi|395003976|ref|ZP_10388065.1| ATP-dependent chaperone ClpB [Acidovorax sp. CF316]
gi|394318076|gb|EJE54546.1| ATP-dependent chaperone ClpB [Acidovorax sp. CF316]
Length = 869
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/666 (66%), Positives = 560/666 (84%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E G L KY +DLTE+AR+GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EGQRGALAKYCLDLTERARIGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+ GEVP SL K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I
Sbjct: 213 IVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNELAKDEGQTI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 VFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
KILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLI
Sbjct: 333 KILVGEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DESS KR LI++EI +L+ +
Sbjct: 393 DEAASKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRREKDESSVKRFGLIEEEIVRLQKE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A+ ++IW+ EK + S ++E I+K++ +I + TRK D+ V++L+YG+L LER LK
Sbjct: 453 IADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVAELQYGKLPDLERQLK 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E K+ A+ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL +E L +
Sbjct: 513 EAQAKEDGKDGVASAPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLQMEGKLHE 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQEEAITAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + IK AV E+K +F
Sbjct: 693 VLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDADDIKEAVWGELKNHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID+ +VF L+ KNI +IA IQL +L+ +L KM++ L+IS AL++++ +GFD
Sbjct: 753 RPEFLNRIDETVVFHALDAKNIEAIARIQLQLLEARLAKMDLQLQISGPALEELAKVGFD 812
Query: 668 LIYGAR 673
++GAR
Sbjct: 813 PVFGAR 818
>gi|302879019|ref|YP_003847583.1| ATP-dependent chaperone ClpB [Gallionella capsiferriformans ES-2]
gi|302581808|gb|ADL55819.1| ATP-dependent chaperone ClpB [Gallionella capsiferriformans ES-2]
Length = 861
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/660 (68%), Positives = 565/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +KK+L LD+A LLAG KYRGEFE+RLK +LKE++ ++ I+FIDEL
Sbjct: 221 QRIVNGEVPESLKNKKVLSLDMAALLAGAKYRGEFEERLKNVLKELAMDEGKTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGL+++YE+HHGV+ITDPAI+AA+ELS RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVESTIAILRGLRERYELHHGVDITDPAIIAAAELSNRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+SKKR LI++EI KL +YA+LE+
Sbjct: 401 VRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASKKRHALIEEEIAKLSREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + Q+KEEI++VR +I + R+ + V++L+YG+L +E LKE +Q++
Sbjct: 461 IWKAEKGAAQGTAQLKEEIDRVRAEIVRLQREGKLEKVAELQYGQLPMMEAKLKEAAQRE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + NK LL+T+VG+EEIAE+VSR TGIPVSK++ ER+KLL +E+ L +RVVGQD
Sbjct: 521 AEGGVSKNK--LLRTQVGAEEIAEVVSRATGIPVSKMMTGERDKLLKMEDKLHERVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCK L+ +F++E+ +IRIDM
Sbjct: 579 EAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKALAGFMFDSEDHLIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS++RLIGAPPGY+GYEEGG LTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ L
Sbjct: 639 SEYMEKHSVARLIGAPPGYVGYEEGGGLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQAL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKLAVM EVK YFRPEFIN
Sbjct: 699 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKLAVMGEVKTYFRPEFIN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ KNI SIA IQL L+ +L M M L +S++AL +I+ GFD +YGAR
Sbjct: 759 RIDEVVVFHALDEKNIKSIAGIQLQYLEKRLAAMEMKLAVSESALAEIATAGFDPVYGAR 818
>gi|91788074|ref|YP_549026.1| ATPase [Polaromonas sp. JS666]
gi|91697299|gb|ABE44128.1| ATPase AAA-2 [Polaromonas sp. JS666]
Length = 866
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/660 (66%), Positives = 561/660 (85%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYCMDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP+SL K++L LD+A LLAG K+RGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERLKTVLNELAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV+E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PTVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR LI+ EI KL+ + ++L++
Sbjct: 399 IKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLIEVEIAKLQKEISDLDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK S+ + EEI+++R +I + TRK D+ V++L+YG+L +LE+ LK +
Sbjct: 459 IWQAEKAQALGSKDVMEEIDRIRFQIEEFTRKGDFNKVAELQYGKLPELEKRLKAAQDTE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q ++ LL+T+VG+EEIAE+V+R TGIPVSK++Q ER+KLL +E L +RVVGQD
Sbjct: 519 AQ-KETSDVPKLLRTQVGAEEIAEVVARATGIPVSKLMQGERDKLLLMEGKLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ +IR+DM
Sbjct: 578 EAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRVDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGG+LTE VRRKPYS++LLDEIEKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGHLTEAVRRKPYSVLLLDEIEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK AV +E+K YFRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGQPAEDIKDAVTDELKNYFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI SIA IQL +L +L KM++ +++S+AA+ +++ +GFD ++GAR
Sbjct: 758 RIDETVVFHALDAKNIESIARIQLKVLMERLQKMDLAMEVSEAAIAELAKVGFDPVFGAR 817
>gi|241662872|ref|YP_002981232.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12D]
gi|240864899|gb|ACS62560.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12D]
Length = 862
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/660 (66%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEMARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIVNEEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGRTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+L++
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI+K++L+I K R+ + V++L+YG+L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAAALKEEIDKIKLEITKLQREGKLEKVAELQYGKLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPV+K++ EREKLL +E+ L +RVVGQD
Sbjct: 520 SAGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMTGEREKLLKMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMATEPADVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+++NI SIA IQL L +L +M++ L+IS A+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQRNIESIARIQLKRLSARLAQMDLALEISDEAVAKLASAGYDPVFGAR 817
>gi|309782202|ref|ZP_07676931.1| ATP-dependent chaperone protein ClpB [Ralstonia sp. 5_7_47FAA]
gi|404377897|ref|ZP_10982997.1| chaperone ClpB [Ralstonia sp. 5_2_56FAA]
gi|308918973|gb|EFP64641.1| ATP-dependent chaperone protein ClpB [Ralstonia sp. 5_7_47FAA]
gi|348616016|gb|EGY65522.1| chaperone ClpB [Ralstonia sp. 5_2_56FAA]
Length = 862
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/660 (66%), Positives = 560/660 (84%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEMARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIVNEEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGRTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+L++
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI+K++L+I K R+ + V++L+YG+L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAAALKEEIDKIKLEITKLQREGKLEKVAELQYGKLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPV+K++ EREKLL +E+ L +RVVGQD
Sbjct: 520 SAGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMTGEREKLLKMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMATEPADVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+++NI SIA IQL L +L M++ L+IS A+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQRNIESIARIQLKRLSARLAHMDLALEISDEAVAKLASAGYDPVFGAR 817
>gi|239814845|ref|YP_002943755.1| ATP-dependent chaperone ClpB [Variovorax paradoxus S110]
gi|239801422|gb|ACS18489.1| ATP-dependent chaperone ClpB [Variovorax paradoxus S110]
Length = 873
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/660 (66%), Positives = 560/660 (84%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY +DLTE+ARLGKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYCLDLTERARLGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL K++L LD+A LLAG K+RGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 219 QRIVAGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERLKTVLNELAKDEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKI+V E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR LI+ EI +L+ + A+ ++
Sbjct: 399 IKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLIEDEIARLQKEIADYDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK + S +I+E+I+K++ +I + RK D+ +++L+YG+L LE+ L+E + +
Sbjct: 459 IWQAEKAQAQGSAKIREDIDKIKFEIEEWKRKGDFNKLAELQYGQLPALEKRLREAEESE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
++ TLL+T+VGSEEIAE+V+R TGIPV+K++Q ER+KLL +E+ L +RVVGQD
Sbjct: 519 AS-KGKSSAPTLLRTQVGSEEIAEVVARATGIPVAKLMQGERDKLLVMEDKLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ +IRIDM
Sbjct: 578 EAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHHDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK AV +E+K YFRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGQPAEEIKEAVWDELKNYFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI SIA IQL +L+ +L KM++ L++S AAL +I+ +GFD ++GAR
Sbjct: 758 RIDETVVFHALDAKNIESIAAIQLKVLQARLAKMDLGLEVSPAALAEIAKVGFDPVFGAR 817
>gi|296135529|ref|YP_003642771.1| ATP-dependent chaperone ClpB [Thiomonas intermedia K12]
gi|295795651|gb|ADG30441.1| ATP-dependent chaperone ClpB [Thiomonas intermedia K12]
Length = 861
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/660 (67%), Positives = 558/660 (84%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTIDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP+SL K++L+LDIALLLAG K+RGEFE+RLK +LKE+S + I+FIDE+
Sbjct: 219 QRIVNDEVPDSLRGKRLLVLDIALLLAGAKFRGEFEERLKNVLKELSQDAGQTIVFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK++V+E
Sbjct: 279 HTMVGAGKGEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVMVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEDTIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE MDKL+RR IQLKIE EA+KRE DE+S+KRL LI++E+ KL+ +YA+L++
Sbjct: 399 IKIEIDSKPEAMDKLDRRRIQLKIEREAVKREKDEASQKRLALIEEELAKLDREYADLDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ S IKEEI+K+R +I + RK D+ V++L+YG L +LER L E K+
Sbjct: 459 IWKAEKAAVQGSAAIKEEIDKIRFEIEELKRKGDFNKVAELQYGRLPELERKLHEAQAKE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LL+T+VG+EEIAE+VSR TGIPVSK+VQ ER+KL+++E L +RVVGQD
Sbjct: 519 TADGDQPQARRLLRTQVGAEEIAEVVSRATGIPVSKLVQGERDKLVHMEERLHRRVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVS+AIRRSR+GLSD +RPYGSF+FLGPTGVGKTEL K L+ +F+ +E I+R+DM
Sbjct: 579 EAIRAVSDAIRRSRAGLSDPRRPYGSFLFLGPTGVGKTELTKGLAEFLFDTDEHIVRLDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS++L DE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS +I M ++ I+ AV EVK +FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIVMTSNLGSHQIMAMSGQPQQAIRDAVWEEVKAHFRPEFLN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L K I IA IQL L+ +L +++M L +S AL +I+ GFD ++GAR
Sbjct: 759 RIDEVVVFHALGEKEIADIARIQLRGLEGRLAQLDMRLDVSSEALAEIAREGFDPVFGAR 818
>gi|410693234|ref|YP_003623855.1| Chaperone clpB (Heat-shock protein F84.1) [Thiomonas sp. 3As]
gi|294339658|emb|CAZ88018.1| Chaperone clpB (Heat-shock protein F84.1) [Thiomonas sp. 3As]
Length = 861
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/660 (67%), Positives = 558/660 (84%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTIDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP+SL K++L+LDIALLLAG K+RGEFE+RLK +LKE+S + I+FIDE+
Sbjct: 219 QRIVNDEVPDSLRGKRLLVLDIALLLAGAKFRGEFEERLKNVLKELSQDAGQTIVFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK++V+E
Sbjct: 279 HTMVGAGKGEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVMVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PSVEDTIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE MDKL+RR IQLKIE EA+KRE DE+S+KRL LI++E+ KL+ +YA+L++
Sbjct: 399 IKIEIDSKPEAMDKLDRRRIQLKIEREAVKREKDEASQKRLALIEEELAKLDREYADLDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ S IKEEI+K+R +I + RK D+ V++L+YG L +LER L E K+
Sbjct: 459 IWKAEKAAVQGSAAIKEEIDKIRFEIEELKRKGDFNKVAELQYGRLPELERKLHEAQAKE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LL+T+VG+EEIAE+VSR TGIPVSK+VQ ER+KL+++E L +RVVGQD
Sbjct: 519 TADGDQPQARRLLRTQVGAEEIAEVVSRATGIPVSKLVQGERDKLVHMEERLHRRVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVS+AIRRSR+GLSD +RPYGSF+FLGPTGVGKTEL K L+ +F+ +E I+R+DM
Sbjct: 579 EAIRAVSDAIRRSRAGLSDPRRPYGSFLFLGPTGVGKTELTKGLAEFLFDTDEHIVRLDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS++L DE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS +I M ++ I+ AV EVK +FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIVMTSNLGSHQIMAMSGQPQQAIRDAVWEEVKAHFRPEFLN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L K I IA IQL L+ +L +++M L +S AL +I+ GFD ++GAR
Sbjct: 759 RIDEVVVFHALGEKEIADIARIQLRGLEGRLAQLDMRLDVSSEALAEIAREGFDPVFGAR 818
>gi|264677176|ref|YP_003277082.1| ATPase AAA [Comamonas testosteroni CNB-2]
gi|262207688|gb|ACY31786.1| ATPase AAA-2 [Comamonas testosteroni CNB-2]
Length = 877
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/661 (66%), Positives = 572/661 (86%), Gaps = 3/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 169 LKKYTLDLTERARSGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 228
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL +K++L LD+A LLAG KYRG+FE+RLK +LKEI+ ++ II+FIDE+
Sbjct: 229 QRIVAGEVPESLQNKRVLSLDMAGLLAGAKYRGDFEERLKSVLKEIAQDEGRIILFIDEI 288
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK++V+E
Sbjct: 289 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVIVDE 348
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ KYE HH V+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 349 PSVEDTIAILRGLQVKYEAHHNVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 408
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MDKLERR+IQLKIE EA+KRE DE+S+KRL LI++E+ LE +YA+LE+
Sbjct: 409 IKIEMDSKPEVMDKLERRMIQLKIEREAMKREKDEASQKRLQLIEEELESLEREYADLEE 468
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKE-KSQK 372
IWK EK S+QI++E++++R++I + RK D+ V++L+YG+L LE+ L E ++++
Sbjct: 469 IWKAEKASALGSEQIRKEVDQLRIQIEEFKRKGDFNKVAELQYGKLPALEKQLHEAQAKE 528
Query: 373 DIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ Q ANK LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL++E+ L +RVVGQ
Sbjct: 529 EGQDGATANK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLHMEDKLHERVVGQ 586
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
+EAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ ++RID
Sbjct: 587 EEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLVRID 646
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+
Sbjct: 647 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQV 706
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + +K AV E+K +FRPEF+
Sbjct: 707 LDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGEDADDVKEAVWGELKNHFRPEFL 766
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L+ KNI +IA IQL +L+++L KM + +++S+ AL +++ +GFD ++GA
Sbjct: 767 NRIDETVVFHALDAKNIEAIARIQLKLLESRLQKMELSMQVSEQALAELAKVGFDPVFGA 826
Query: 673 R 673
R
Sbjct: 827 R 827
>gi|224825048|ref|ZP_03698154.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania ferrooxidans 2002]
gi|224602719|gb|EEG08896.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania ferrooxidans 2002]
Length = 858
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/662 (67%), Positives = 565/662 (85%), Gaps = 7/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL KK+L+LD+A LLAG KYRG+FE+RLK +L +++ ++ + +IFIDE+
Sbjct: 221 QRIVNGEVPESLKHKKLLVLDLAALLAGAKYRGDFEERLKSVLSDLAKDEGNTLIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTLVGAGKAEGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+E+DSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI+ EI++L +YA+LE+
Sbjct: 401 IKMELDSKPEEMDKLDRRLIQLKIEREAVKKESDEASQKRLGLIEDEIDRLSREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK--EKSQ 371
IWK EK + SQ IKEEI+++++++ R+ DWQ +++L+YG+L +LE LK E +
Sbjct: 461 IWKAEKATAQGSQSIKEEIDRLKVEMEDLKRQGDWQKLAELQYGKLPQLEARLKEAEAAG 520
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
Q PN LL+T+VG+EEIAE+VSR TGIPVSK++ EREKLL +E +L +R+VG
Sbjct: 521 AGTQKPNR-----LLRTQVGAEEIAEVVSRMTGIPVSKMLAGEREKLLRMEEVLHERLVG 575
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
QDEA+ AVS+AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCKTL+ +F++E+ +IRI
Sbjct: 576 QDEAVRAVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKTLAGFLFDSEDHLIRI 635
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSE++EKHS++RLIGAPPGY+GYEEGG LTE VRRKPYS+ILLDE+EKA+ +VFNILLQ
Sbjct: 636 DMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEQVRRKPYSVILLDEVEKAHPEVFNILLQ 695
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 611
+LDDGRLTD +GRT++F+NT++VMTSN+GS I+ M D ++IKLAVM EVK YFRPEF
Sbjct: 696 VLDDGRLTDGQGRTVDFKNTVVVMTSNIGSQHIQAMGSDDYQVIKLAVMAEVKGYFRPEF 755
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L I SIA IQL L+ +L K+ + L+++ AAL I+ GFD +YG
Sbjct: 756 INRIDEVVVFHALGSAQIRSIARIQLKSLERRLAKLELSLQVTDAALDAIAEAGFDPVYG 815
Query: 672 AR 673
AR
Sbjct: 816 AR 817
>gi|221068631|ref|ZP_03544736.1| ATP-dependent chaperone ClpB [Comamonas testosteroni KF-1]
gi|220713654|gb|EED69022.1| ATP-dependent chaperone ClpB [Comamonas testosteroni KF-1]
Length = 870
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/661 (66%), Positives = 572/661 (86%), Gaps = 3/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 162 LKKYTLDLTERARSGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 221
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL +K++L LD+A LLAG KYRG+FE+RLK +LKEI+ ++ II+FIDE+
Sbjct: 222 QRIVAGEVPESLQNKRVLSLDMAGLLAGAKYRGDFEERLKSVLKEIAQDEGRIILFIDEI 281
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK++V+E
Sbjct: 282 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVIVDE 341
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ KYE HH V+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 342 PSVEDTIAILRGLQVKYEAHHNVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 401
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MDKLERR+IQLKIE EA+KRE DE+S+KRL LI++E+ LE +YA+LE+
Sbjct: 402 IKIEMDSKPEVMDKLERRMIQLKIEREAMKREKDEASQKRLQLIEEELESLEREYADLEE 461
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKE-KSQK 372
IWK EK S+QI++E++++R++I + RK D+ V++L+YG+L LE+ L E ++++
Sbjct: 462 IWKAEKASALGSEQIRKEVDQLRIQIEEFKRKGDFNKVAELQYGKLPALEKQLHEAQAKE 521
Query: 373 DIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ Q ANK LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL++E+ L +RVVGQ
Sbjct: 522 EGQDGATANK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLHMEDKLHERVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
+EAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ ++RID
Sbjct: 580 EEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLVRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + +K AV E+K +FRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGEDADDVKEAVWGELKNHFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L+ KNI +IA IQL +L+++L KM + +++S+ AL +++ +GFD ++GA
Sbjct: 760 NRIDETVVFHALDAKNIEAIARIQLKLLESRLQKMELSMQVSEQALAELAKVGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>gi|347539270|ref|YP_004846695.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania sp. NH8B]
gi|345642448|dbj|BAK76281.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania sp. NH8B]
Length = 858
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/662 (67%), Positives = 565/662 (85%), Gaps = 7/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL KK+L+LD+A LLAG KYRG+FE+RLK +L +++ ++ + +IFIDE+
Sbjct: 221 QRIVNGEVPESLKHKKLLVLDLAALLAGAKYRGDFEERLKSVLSDLAKDEGNTLIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTLVGAGKAEGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+E+DSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI+ EI++L +YA+LE+
Sbjct: 401 IKMELDSKPEEMDKLDRRLIQLKIEREAVKKESDEASQKRLGLIEDEIDRLSREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK--EKSQ 371
IWK EK + SQ IKEEI+++++++ R+ DWQ +++L+YG+L +LE LK E +
Sbjct: 461 IWKAEKATAQGSQSIKEEIDRLKVEMEDLKRQGDWQKLAELQYGKLPQLEARLKEAEAAG 520
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
Q PN LL+T+VG+EEIAE+VSR TGIPVSK++ EREKLL +E ++ +R+VG
Sbjct: 521 AGTQKPNR-----LLRTQVGAEEIAEVVSRMTGIPVSKMLAGEREKLLKMEEVMHERLVG 575
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
QDEA+ AVS+AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCKTL+ +F++E+ +IRI
Sbjct: 576 QDEAVRAVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKTLAGFLFDSEDHLIRI 635
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSE++EKHS++RLIGAPPGY+GYEEGG LTE VRRKPYS+ILLDE+EKA+ +VFNILLQ
Sbjct: 636 DMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEQVRRKPYSVILLDEVEKAHPEVFNILLQ 695
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 611
+LDDGRLTD +GRT++F+NT++VMTSN+GS I+ M D ++IKLAVM EVK YFRPEF
Sbjct: 696 VLDDGRLTDGQGRTVDFKNTVVVMTSNIGSQHIQAMGSDDYQVIKLAVMAEVKGYFRPEF 755
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L I SIA IQL L+ +L K+ + L+++ AAL I+ GFD +YG
Sbjct: 756 INRIDEVVVFHALGSAQIRSIARIQLKSLERRLAKLELSLQVTDAALDAIAEAGFDPVYG 815
Query: 672 AR 673
AR
Sbjct: 816 AR 817
>gi|299530720|ref|ZP_07044135.1| ATPase AAA-2 [Comamonas testosteroni S44]
gi|418530573|ref|ZP_13096496.1| ATPase AAA [Comamonas testosteroni ATCC 11996]
gi|298721236|gb|EFI62178.1| ATPase AAA-2 [Comamonas testosteroni S44]
gi|371452292|gb|EHN65321.1| ATPase AAA [Comamonas testosteroni ATCC 11996]
Length = 870
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/661 (66%), Positives = 571/661 (86%), Gaps = 3/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 162 LKKYTLDLTERARSGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 221
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL +K++L LD+A LLAG KYRG+FE+RLK +LKEI+ ++ II+FIDE+
Sbjct: 222 QRIVAGEVPESLQNKRVLSLDMAGLLAGAKYRGDFEERLKSVLKEIAQDEGRIILFIDEI 281
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK++V+E
Sbjct: 282 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVIVDE 341
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ KYE HH V+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 342 PSVEDTIAILRGLQVKYEAHHNVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 401
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE+DSKPE+MDKLERR+IQLKIE EA+KRE DE+S+KRL LI++E+ LE +YA+LE+
Sbjct: 402 IKIEMDSKPEVMDKLERRMIQLKIEREAMKREKDEASQKRLQLIEEELESLEREYADLEE 461
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKE-KSQK 372
IWK EK S+QI++E++++R++I + RK D+ V++L+YG+L LE+ L E ++++
Sbjct: 462 IWKAEKASALGSEQIRKEVDQLRIQIEEFKRKGDFNKVAELQYGKLPALEKQLHEAQAKE 521
Query: 373 DIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ Q ANK LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL++E L +RVVGQ
Sbjct: 522 EGQDGATANK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLHMEGKLHERVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
+EAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ ++RID
Sbjct: 580 EEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLVRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + +K AV E+K +FRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGEDADDVKEAVWGELKNHFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L+ KNI +IA IQL +L+++L KM + +++S+ AL +++ +GFD ++GA
Sbjct: 760 NRIDETVVFHALDAKNIEAIARIQLKLLESRLQKMELSMQVSEQALAELAKVGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>gi|456063699|ref|YP_007502669.1| ATPase [beta proteobacterium CB]
gi|455440996|gb|AGG33934.1| ATPase [beta proteobacterium CB]
Length = 864
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/661 (66%), Positives = 558/661 (84%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR+GKLDPVIGRDDEIRR IQ+LQRR KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERARMGKLDPVIGRDDEIRRTIQILQRRGKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP +L +K++L+LD+ALLLAG KYRGEFE+RLK +L +++ ++ IIFIDE+
Sbjct: 221 QRIINGEVPETLKNKRVLVLDMALLLAGAKYRGEFEERLKAVLSDVAKDEGQTIIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKD A ERRFQK++VEE
Sbjct: 281 HTMVGAGKGDGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDPALERRFQKVMVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA ++
Sbjct: 341 PSVEATIAILRGLQERYELHHGIEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGSR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S+KRL LI+ EI +L +YA+LE+
Sbjct: 401 IRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASQKRLSLIEDEIKRLGAEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEIEKVR I K R+ + V++L+YG+L +LE LK + +
Sbjct: 461 IWKAEKGAVLGAAHLKEEIEKVRADIAKLQREGKLEQVAELQYGKLPELEAKLKSAAAAE 520
Query: 374 IQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ + K LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E LL KRVVGQ
Sbjct: 521 AKGDKDGVVKNKLLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEELLHKRVVGQ 580
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
+EAI AVS+AIRRSR+GL++ RPYGSF+FLGPTGVGKTELCK L+ +F++E+ +IRID
Sbjct: 581 EEAIRAVSDAIRRSRAGLAEENRPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRID 640
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+IL DEIEKA+ DVFN+LLQ+
Sbjct: 641 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRHPYSVILFDEIEKAHPDVFNVLLQV 700
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + IK AV E+K +FRPEF+
Sbjct: 701 LDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQSMTDKKQSEIKDAVFEELKNHFRPEFL 760
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+I+VF L++ NI +IA I L L ++L K++M +++S AAL KI+ +GFD ++GA
Sbjct: 761 NRIDEIVVFHGLDKGNIANIAKILLKNLSDRLAKVDMQMEVSDAALSKIAEVGFDPVFGA 820
Query: 673 R 673
R
Sbjct: 821 R 821
>gi|114330749|ref|YP_746971.1| ATPase [Nitrosomonas eutropha C91]
gi|114307763|gb|ABI59006.1| ATPase AAA-2 domain protein [Nitrosomonas eutropha C91]
Length = 863
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/660 (68%), Positives = 561/660 (85%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARSGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +LKE++ ++ I+FIDEL
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKTVLKELAQDEGRTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PGVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E DSKPE+MDKL+RRLIQLKIE EA+K+E DE+SKKRL L+++EI KLE +YA+L++
Sbjct: 401 IRMEQDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASKKRLALLEEEIEKLEREYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
I K EK+ K SQ+IKEE+EK+R + A RK D Q S+L YG + +LE L E+ D
Sbjct: 461 ILKAEKSRAKGSQEIKEELEKLRREEEAARRKGDLQKASELLYGRIPQLETQLAEQLHHD 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ A + L +T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E+ L +RV+GQD
Sbjct: 521 -ESAEEATQPKLFRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLFMEDKLHERVIGQD 579
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCK L+ +F++EE +IR+DM
Sbjct: 580 EAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRVDM 639
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 640 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEQIRRKPYSVILLDEVEKAHPDVFNVLLQVL 699
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++M D + IK AVM EVK YFRPEFIN
Sbjct: 700 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQAIKQAVMGEVKTYFRPEFIN 759
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ +I SIA IQL+ L +L +M M L +S++AL K++ GFD I+GAR
Sbjct: 760 RIDEVVVFHSLDEAHIKSIAKIQLSNLGARLAQMEMKLVVSESALAKLAEAGFDPIFGAR 819
>gi|301630819|ref|XP_002944514.1| PREDICTED: chaperone protein clpB-like, partial [Xenopus (Silurana)
tropicalis]
Length = 739
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/660 (66%), Positives = 567/660 (85%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY +DLTE+AR+GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 26 LKKYCLDLTERARVGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 85
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FIDEL
Sbjct: 86 QRIVAGEVPESLKNKRVLALDMAALLAGAKYRGEFEERLKTVLNELAKDEGQTIVFIDEL 145
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV+E
Sbjct: 146 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVDE 205
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGL++KYE+HHGVEITDPAIVAA+ELS+RY++DRF+PDKAIDLIDEAAAK
Sbjct: 206 PSVEATIAILRGLREKYELHHGVEITDPAIVAAAELSHRYVTDRFLPDKAIDLIDEAAAK 265
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIEIDSKPE +DKL+RRLIQL+IE EA+KRE DE+S+KRL LI++EI KL+ + A+LE
Sbjct: 266 IKIEIDSKPEAIDKLDRRLIQLQIEREAVKREKDEASQKRLQLIEEEITKLQREIADLED 325
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + SQQ++E+IEKV+L+I + R+ D+ V++L+YG+L +LE+ LKE ++
Sbjct: 326 IWKSEKAQAQGSQQVREQIEKVKLQIEELKRQGDFNKVAELQYGQLPELEKRLKEAQAQE 385
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LL+T+VG+EEIAE+VSR TGIPVSK++Q E++KLL++E+ L +RV+GQD
Sbjct: 386 EGQGGTVHAHRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEKDKLLHMEDKLHERVIGQD 445
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAISAV++AIRRSR+GLSD +RP GSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 446 EAISAVAHAIRRSRAGLSDPQRPTGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 505
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY+++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 506 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYAVLLLDEVEKAHPDVFNVLLQVL 565
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + IK AV E+K +FRPEF+N
Sbjct: 566 DDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMLGQDSDDIKEAVWGELKQHFRPEFLN 625
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ ++I +IA IQL +L+ +L ++ + L IS AAL++++ +GFD ++GAR
Sbjct: 626 RIDETVVFHGLDARHIAAIARIQLQLLQTRLARVELTLDISDAALEELAKVGFDPVFGAR 685
>gi|121605125|ref|YP_982454.1| ATPase [Polaromonas naphthalenivorans CJ2]
gi|120594094|gb|ABM37533.1| ATPase AAA-2 domain protein [Polaromonas naphthalenivorans CJ2]
Length = 867
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/660 (65%), Positives = 558/660 (84%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYCMDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP+SL K++L LD+A L+AG K+RGEFE+RLK +L E++ + I+FIDEL
Sbjct: 219 QRIVAGEVPDSLKGKRVLSLDMAALVAGAKFRGEFEERLKTVLNELAKEEGQTIVFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV E
Sbjct: 279 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVGE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 339 PTVEATIAILRGLQEKYETHHGVQITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+KIEIDSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR LI++EI KL+ + +++++
Sbjct: 399 VKIEIDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLIEEEIGKLQKEISDMDE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK S+ + EEI+ + +I + TRK D+ V++L+YG+L +L++ LK+ +Q
Sbjct: 459 IWQAEKAQALGSKDVMEEIDTINTQIEEFTRKGDFNKVAELQYGKLPELKKRLKQ-AQDT 517
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ +K LL+T+VG+EEIAE+VSR TGIPV+K++Q E++KLL +E L +RVVGQD
Sbjct: 518 EESKGVDDKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDKLLQMEGKLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++E+ ++RIDM
Sbjct: 578 EAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLVRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK AV +E+K YFRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGQPYEEIKDAVTDELKNYFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L+ KNI SIA IQL +L +L KM++ L +S+AA+ +++ +GFD ++GAR
Sbjct: 758 RIDETVVFHALDAKNIESIARIQLKVLLARLAKMDLVLDVSEAAIGELAKVGFDPVFGAR 817
>gi|145588634|ref|YP_001155231.1| ATPase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047040|gb|ABP33667.1| ATPase AAA-2 domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 867
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/661 (66%), Positives = 556/661 (84%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERARAGKLDPVIGRDDEIRRTIQILQRRGKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L +K++L+LD+ALLLAG KYRGEFE+RLK +L +++ ++ IIFIDE+
Sbjct: 221 QRIVNGEVPETLKNKRVLVLDMALLLAGAKYRGEFEERLKAVLSDVAKDEGQTIIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKD A ERRFQK++VEE
Sbjct: 281 HTMVGAGKGDGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDPALERRFQKVMVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA ++
Sbjct: 341 PSVEATIAILRGLQERYELHHGIEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGSR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S+KRL LI+ EI +L +YA+LE+
Sbjct: 401 IRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASQKRLGLIEDEIKRLGAEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEIEK+R I K R+ + V++L+Y +L +LE LK + +
Sbjct: 461 IWKAEKGAVLGAANLKEEIEKIRADIVKLQREGKLEQVAELQYSKLPELEAKLKSAAAAE 520
Query: 374 IQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ N K LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E LL KRVVGQ
Sbjct: 521 AKGDKNGVVKNKLLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEELLHKRVVGQ 580
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
+EAI AVS+AIRRSR+GL++ RPYGSF+FLGPTGVGKTELCK L+ +F++E+ +IRID
Sbjct: 581 EEAIRAVSDAIRRSRAGLAEENRPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRID 640
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+IL DEIEKA+ DVFN+LLQ+
Sbjct: 641 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRHPYSVILFDEIEKAHPDVFNVLLQV 700
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + IK AV E+K +FRPEF+
Sbjct: 701 LDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQSMVDKKQAEIKEAVFEELKNHFRPEFL 760
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+I+VF L++ NI +IA I L L ++L K++M L++S AAL KI+ +GFD ++GA
Sbjct: 761 NRIDEIVVFHGLDKGNIANIAKILLKNLSDRLAKVDMQLEVSDAALSKIAEVGFDPVFGA 820
Query: 673 R 673
R
Sbjct: 821 R 821
>gi|226939364|ref|YP_002794437.1| ClpB [Laribacter hongkongensis HLHK9]
gi|226714290|gb|ACO73428.1| ClpB [Laribacter hongkongensis HLHK9]
Length = 857
Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/660 (66%), Positives = 566/660 (85%), Gaps = 4/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LSKYTLDLTERAREGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A LLAG K+RGEFE+RLK +L E+S ++ +IFIDE+
Sbjct: 221 QRIVNGEVPESLKNKRLLVLDLAALLAGAKFRGEFEERLKSVLDELSKDEGQTLIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK++V E
Sbjct: 281 HTLVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVMVNE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RR+IQLKIE EA+K+E DE+S+KRL LI++EI KL +YA+L++
Sbjct: 401 IKMEIDSKPESMDKLDRRIIQLKIEREAVKKETDEASQKRLALIEEEIGKLSKEYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + SQ IK+E++KVR +I A R+ D+ S+L+YG+L +LE LK +
Sbjct: 461 IWKAEKAQVVGSQSIKDELDKVRSQIEDAKRRGDFGKASELQYGKLPELESRLKAAEAGE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL+T+VG+EEIAE+VSR TGIPVSK+++ EREKLL++E++L +RVVGQD
Sbjct: 521 ----GSKGQNRLLRTEVGAEEIAEVVSRATGIPVSKMLEGEREKLLHMEDVLHQRVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL+ +F++E+ +IRIDM
Sbjct: 577 EAVRVVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTLAGFMFDSEDHLIRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT++VMTSN+GS +I+ M ++IKLAVMNEVK YFRPEFIN
Sbjct: 697 DDGRLTDGQGRTVDFKNTVVVMTSNVGSQQIQSMAGDHYDLIKLAVMNEVKGYFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++ NI +IA IQL L+ +L K+ + L+++ AL K++ GFD +YGAR
Sbjct: 757 RIDEVVVFHGLDQANIRAIARIQLKRLEARLDKLELSLQVTDDALDKLAEAGFDPVYGAR 816
>gi|238022814|ref|ZP_04603240.1| hypothetical protein GCWU000324_02727 [Kingella oralis ATCC 51147]
gi|237866017|gb|EEP67153.1| hypothetical protein GCWU000324_02727 [Kingella oralis ATCC 51147]
Length = 858
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/667 (65%), Positives = 555/667 (83%), Gaps = 5/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTTDLTERAREGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKYRGEFEERLKAVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVNEPSVEDTIAILRGLQERYEIHHGVDITDPAIVAAAELSNRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE MDKL+RR+IQLK+E +++E DE+SKKRL LI +EI LE +
Sbjct: 395 DEAASRIKMEIDSKPEQMDKLDRRIIQLKMERMHVEKESDEASKKRLTLIDEEIAGLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK +K +I+ ++ +I +A R D+ S+L+YGEL KL LK
Sbjct: 455 YADLDEIWKAEKASSVSMSDLKTQIDNLKTRIEQAKRAGDYGLASELEYGELPKLTLQLK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + +N TL +T+VG+EEIAEIVSR TGIPVSK+++ EREKLL +E++L +
Sbjct: 515 DAERSGSLKKHN----TLFRTEVGAEEIAEIVSRMTGIPVSKMMEGEREKLLKMEDVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + D + +K AVM +VK Y
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQAIQAMGDTSDYDAVKAAVMEDVKAY 750
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPE INRID+++VF LN NI SIA IQL+ LK +L + N+ L++S+AAL ++ GF
Sbjct: 751 FRPELINRIDEVVVFHGLNAANIRSIAQIQLDSLKKRLAEQNLRLEVSEAALDVLAQAGF 810
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 811 DPVYGAR 817
>gi|171463224|ref|YP_001797337.1| ATP-dependent chaperone ClpB [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192762|gb|ACB43723.1| ATP-dependent chaperone ClpB [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 867
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/661 (65%), Positives = 558/661 (84%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR+GKLDPVIGRDDEIRR IQ+LQRR KNNPVLIGE GVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERARMGKLDPVIGRDDEIRRTIQILQRRGKNNPVLIGESGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L +K++L+LD+ALLLAG KYRGEFE+RLK +L +++ ++ IIFIDE+
Sbjct: 221 QRIVNGEVPETLKNKRVLVLDMALLLAGAKYRGEFEERLKAVLSDVAKDEGQTIIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKD A ERRFQK+++EE
Sbjct: 281 HTMVGAGKGDGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDPALERRFQKVMIEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA ++
Sbjct: 341 PSVEATIAILRGLQERYELHHGIEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGSR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S+KRL LI++EI +L +YA+LE+
Sbjct: 401 IRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASQKRLGLIEEEIKRLGAEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEIEKV+ +I+K R + V++L+YG+L +LE LK + +
Sbjct: 461 IWKAEKGAVLGAANLKEEIEKVKAEISKLQRDGKLEQVAELQYGKLPELEAKLKSAAAAE 520
Query: 374 IQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ + K LL+T+VG EEIAE+VSR TGIPVSK++Q ER+KLL +E LL KRVVGQ
Sbjct: 521 AKGDKDGVVKNKLLRTQVGVEEIAEVVSRATGIPVSKMMQGERDKLLKMEELLHKRVVGQ 580
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
+EAI AVS+AIRRSR+GL++ RPYGSF+FLGPTGVGKT+LCK L+ +F++E+ +IRID
Sbjct: 581 EEAIRAVSDAIRRSRAGLAEENRPYGSFLFLGPTGVGKTKLCKALAGFLFDSEDHLIRID 640
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+IL DEIEKA+ DVFN+LLQ+
Sbjct: 641 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRHPYSVILFDEIEKAHPDVFNVLLQV 700
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + IK AV E+K +FRPEF+
Sbjct: 701 LDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQSMADKKQSEIKEAVFEELKNHFRPEFL 760
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+I+VF L++ NI +IA I L L ++L K++M L++S AAL KI+ +GFD ++GA
Sbjct: 761 NRIDEIVVFHGLDKGNIANIAKILLKNLSDRLAKVDMQLEVSDAALNKIAEVGFDPVFGA 820
Query: 673 R 673
R
Sbjct: 821 R 821
>gi|333375879|ref|ZP_08467677.1| chaperone protein ClpB [Kingella kingae ATCC 23330]
gi|332969337|gb|EGK08362.1| chaperone protein ClpB [Kingella kingae ATCC 23330]
Length = 858
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/662 (65%), Positives = 558/662 (84%), Gaps = 7/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTTDLTERARNGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL K++L+LD+A L+AG K+RGEFE+RLK +L +++ + + +IFIDE+
Sbjct: 221 QRIVNGEVPESLRGKRLLVLDLAALIAGAKFRGEFEERLKAVLNDLAKDDGNSLIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTLVGAGKSDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEATIAILRGLQERYEIHHGVDITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+E+DSKPE MDKL+RR+IQL++E + +E D++SKKRL LI +EI L+ +YA+L++
Sbjct: 401 IKMELDSKPEQMDKLDRRIIQLQMEKMHVAKETDDASKKRLELIDEEIGSLQKEYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKL-ERILKEKSQK 372
IWK EK S +K++IE RLKI +A R D+ S+L+YG L KL +++ +S
Sbjct: 461 IWKAEKASSVSSNDVKKQIEDTRLKIEQAKRAGDFAKASELEYGVLPKLTQQLHAAESSG 520
Query: 373 DIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
++ ANK L +T+VG+EE+AEIVSR TGIPVSK+++ EREKLL +E +L KRVVGQ
Sbjct: 521 SLK---QANK--LFRTQVGAEEVAEIVSRMTGIPVSKMMEGEREKLLKMEEVLHKRVVGQ 575
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEA+ AV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL+ +F++EE +IR+D
Sbjct: 576 DEAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTLANFLFDSEEHLIRVD 635
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+
Sbjct: 636 MSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQV 695
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEF 611
LDDGRLTD +GRT++F+NT++VMTSN+GS I+EM + D +K AVM++VK YFRPE
Sbjct: 696 LDDGRLTDGQGRTVDFKNTVVVMTSNIGSQNIQEMGDTSDYAAVKEAVMDDVKAYFRPEL 755
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L++ NI +IA IQL L+N+L N+ L++S+AAL I++ GFD +YG
Sbjct: 756 INRIDEVVVFHGLSQANIRNIAKIQLIGLRNRLAAQNLRLEVSEAALDLIADAGFDPVYG 815
Query: 672 AR 673
AR
Sbjct: 816 AR 817
>gi|340362813|ref|ZP_08685179.1| chaperone protein ClpB [Neisseria macacae ATCC 33926]
gi|339886971|gb|EGQ76574.1| chaperone protein ClpB [Neisseria macacae ATCC 33926]
Length = 857
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 556/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVSKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K AVM EVK YF
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEAVMEEVKAYF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+ AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAKAGFD 810
Query: 668 LIYGAR 673
+YGAR
Sbjct: 811 PVYGAR 816
>gi|261364438|ref|ZP_05977321.1| ATP-dependent chaperone protein ClpB [Neisseria mucosa ATCC 25996]
gi|288567348|gb|EFC88908.1| ATP-dependent chaperone protein ClpB [Neisseria mucosa ATCC 25996]
Length = 857
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 556/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K AVM EVK YF
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEAVMEEVKAYF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+ AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAKAGFD 810
Query: 668 LIYGAR 673
+YGAR
Sbjct: 811 PVYGAR 816
>gi|349611011|ref|ZP_08890327.1| chaperone ClpB [Neisseria sp. GT4A_CT1]
gi|419797400|ref|ZP_14322885.1| ATP-dependent chaperone protein ClpB [Neisseria sicca VK64]
gi|348615041|gb|EGY64573.1| chaperone ClpB [Neisseria sp. GT4A_CT1]
gi|385698231|gb|EIG28607.1| ATP-dependent chaperone protein ClpB [Neisseria sicca VK64]
Length = 857
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 556/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K AVM EVK YF
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEAVMEEVKAYF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+ AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAKAGFD 810
Query: 668 LIYGAR 673
+YGAR
Sbjct: 811 PVYGAR 816
>gi|332284688|ref|YP_004416599.1| ATP-dependent protease, ATPase subunit [Pusillimonas sp. T7-7]
gi|330428641|gb|AEC19975.1| ATP-dependent protease, ATPase subunit [Pusillimonas sp. T7-7]
Length = 864
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/701 (62%), Positives = 567/701 (80%), Gaps = 16/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT DLTE+ARLGKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LAKYTTDLTERARLGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG KYRGEFE+RLK +LKE+S + I+FIDEL
Sbjct: 221 QRIVNNEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLKELSQDDGRTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDAA ERRFQK+L+ E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDAALERRFQKVLINE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGV ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PDVESTIAILRGLQERYELHHGVAITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+ ++ DE S++RL I+ E+ KL+ +Y + E+
Sbjct: 401 IRMEIDSKPEVMDKLDRRIIQLKIEREAVNKDTDEGSQRRLKAIEDELVKLQREYNDYEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK--EKSQ 371
+WK EK ++ SQ IKEEIE+VR + + RK + +++L+YG+L +LE L+ E SQ
Sbjct: 461 VWKSEKAAVQGSQAIKEEIERVRADMAELQRKGQFDKLAELQYGKLPELESRLQSAEASQ 520
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
Q + + LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L +RVVG
Sbjct: 521 ---QQEVDDERPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLKMEDFLHQRVVG 577
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
Q+EA+S V++AIRRSR+GLSD RPYGSF+FLGPTGVGKTEL K L+ +F++EE +IRI
Sbjct: 578 QNEAVSLVADAIRRSRAGLSDPSRPYGSFLFLGPTGVGKTELTKALANFLFDSEEHMIRI 637
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDEIEKA+ DVFN+LLQ
Sbjct: 638 DMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEIEKAHPDVFNVLLQ 697
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 611
+LDDGRLTD +GRT++FRNT+I+MTSNLGS I+ M E++K + +E+K FRPEF
Sbjct: 698 VLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQSMAGQPYEVVKEVIWDELKQSFRPEF 757
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NRID+++VF L K+I SIA IQ+ L ++ + M L++S AAL +++ GFD ++G
Sbjct: 758 LNRIDEVVVFHGLEAKHIESIARIQIQRLAQRMAQKEMRLEVSDAALAQLARTGFDPVFG 817
Query: 672 ARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 712
AR + K+++ + H ++P A I G GP+ +
Sbjct: 818 ARPL---KRAI-----QQHIENPIARLILEGKF---GPKDV 847
>gi|381401592|ref|ZP_09926490.1| ClpB protein [Kingella kingae PYKK081]
gi|380833446|gb|EIC13316.1| ClpB protein [Kingella kingae PYKK081]
Length = 858
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/662 (65%), Positives = 557/662 (84%), Gaps = 7/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTTDLTERARNGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL K++L+LD+A L+AG K+RGEFE+RLK +L +++ + + +IFIDE+
Sbjct: 221 QRIVNGEVPESLRGKRLLVLDLAALIAGAKFRGEFEERLKAVLNDLAKDDGNSLIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTLVGAGKSDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA+
Sbjct: 341 PSVEATIAILRGLQERYEIHHGVDITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAASH 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+E+DSKPE MDKL+RR+IQL++E + +E D++SKKRL LI +EI L+ +YA+L++
Sbjct: 401 IKMELDSKPEQMDKLDRRIIQLQMEKMHVAKETDDASKKRLELIDEEIGNLQKEYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKL-ERILKEKSQK 372
IWK EK S +K++IE RLKI +A R D+ S+L+YG L KL +++ +S
Sbjct: 461 IWKAEKASSVSSNDVKKQIEDTRLKIEQAKRAGDFAKASELEYGVLPKLTQQLHAAESSG 520
Query: 373 DIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
++ ANK L +T+VG+EE+AEIVSR TGIPVSK+++ EREKLL +E +L KRVVGQ
Sbjct: 521 SLK---QANK--LFRTQVGAEEVAEIVSRMTGIPVSKMMEGEREKLLKMEEVLHKRVVGQ 575
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEA+ AV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL+ +F++EE +IR+D
Sbjct: 576 DEAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTLANFLFDSEEHLIRVD 635
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+
Sbjct: 636 MSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQV 695
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEF 611
LDDGRLTD +GRT++F+NT++VMTSN+GS I+EM + D +K AVM++VK YFRPE
Sbjct: 696 LDDGRLTDGQGRTVDFKNTVVVMTSNIGSQNIQEMGDTSDYAAVKEAVMDDVKAYFRPEL 755
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L++ NI +IA IQL L+N+L N+ L++S+AAL I++ GFD +YG
Sbjct: 756 INRIDEVVVFHGLSQANIRNIAKIQLIGLRNRLAAQNLRLEVSEAALDLIADAGFDPVYG 815
Query: 672 AR 673
AR
Sbjct: 816 AR 817
>gi|294669705|ref|ZP_06734772.1| hypothetical protein NEIELOOT_01606 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308618|gb|EFE49861.1| hypothetical protein NEIELOOT_01606 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 857
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 556/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K AVM EVK YF
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEAVMEEVKAYF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+ AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAEAGFD 810
Query: 668 LIYGAR 673
+YGAR
Sbjct: 811 PVYGAR 816
>gi|298368650|ref|ZP_06979968.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 014
str. F0314]
gi|298282653|gb|EFI24140.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 014
str. F0314]
Length = 857
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 556/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D + +K AVM EVK YF
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYDAVKEAVMEEVKAYF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+ AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAKAGFD 810
Query: 668 LIYGAR 673
+YGAR
Sbjct: 811 PVYGAR 816
>gi|349575394|ref|ZP_08887312.1| chaperone protein ClpB [Neisseria shayeganii 871]
gi|348013042|gb|EGY51968.1| chaperone protein ClpB [Neisseria shayeganii 871]
Length = 861
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/660 (64%), Positives = 553/660 (83%), Gaps = 5/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRA+QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 166 LKKYTLDLTERAREGKLDPVIGRDDEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 225
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI++GEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +IFIDE+
Sbjct: 226 QRIVDGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKAVLNDLAKDDGNTLIFIDEI 285
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQK+LV E
Sbjct: 286 HTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVSE 345
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 346 PSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAASR 405
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+E+DSKPE MDKL+RR+IQL++E +++E DE+SKKRLLLI +EI L+ +YA+L++
Sbjct: 406 IKMELDSKPEQMDKLDRRIIQLRMEKMHVEKESDEASKKRLLLIDEEIAALQKEYADLDE 465
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK S IK+ I+++++KI + R+ + + ++++YG+L ++E LK
Sbjct: 466 IWKAEKAATSGSADIKKRIDEIKIKIEQFKRQGNLEAAARMQYGDLPQMEAQLKAAENS- 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
A L +TKVG++E+AEIVSR TGIPVSK+++ EREKLL +E++L +RVVGQD
Sbjct: 525 ----GGAQSNRLFRTKVGADEVAEIVSRMTGIPVSKMMEGEREKLLKMEDVLHRRVVGQD 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV++AIRRSRSGLSD +PYGSF+FLGPTGVGKTELCKTL+ +F++EE +IRIDM
Sbjct: 581 EAVRAVADAIRRSRSGLSDPNKPYGSFLFLGPTGVGKTELCKTLAGFLFDSEEHLIRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 641 SEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSVVLLDEVEKAHPDVFNILLQVL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS I++M D + +K VM +VK +FRPE IN
Sbjct: 701 DDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTADYDALKAVVMEDVKQHFRPELIN 760
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++++I SIA IQL L +L + L++S AAL ++ GFD IYGAR
Sbjct: 761 RIDEVVVFHGLDQQHIRSIAKIQLQGLTRRLAAQELHLEVSDAALDVLAQAGFDPIYGAR 820
>gi|329119993|ref|ZP_08248665.1| chaperone protein ClpB [Neisseria bacilliformis ATCC BAA-1200]
gi|327463906|gb|EGF10220.1| chaperone protein ClpB [Neisseria bacilliformis ATCC BAA-1200]
Length = 857
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 555/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL + L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGQQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P L +T+VG++E+AEIVSR TGIPV+K+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PEGKKANKLFRTEVGADEVAEIVSRMTGIPVAKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K AVM EVK YF
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEAVMEEVKAYF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+ AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAKAGFD 810
Query: 668 LIYGAR 673
+YGAR
Sbjct: 811 PVYGAR 816
>gi|74316833|ref|YP_314573.1| ClpB protein [Thiobacillus denitrificans ATCC 25259]
gi|74056328|gb|AAZ96768.1| ClpB protein [Thiobacillus denitrificans ATCC 25259]
Length = 859
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/660 (66%), Positives = 556/660 (84%), Gaps = 5/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLT++AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LAKYTLDLTQRARDGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L KK+L+LD+A LLAG KYRGEFE+RLK +LKE++ + I+F+DE+
Sbjct: 221 QRIVNDEVPETLKGKKVLVLDLAALLAGAKYRGEFEERLKAVLKELAMDPGRYIVFLDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG+IDAGNMLKP L+RGELH IGATTL+EYR+YIEKDAA ERRFQK++V+E
Sbjct: 281 HTLVGAGKAEGAIDAGNMLKPALARGELHLIGATTLDEYRKYIEKDAALERRFQKVMVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVESTIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+SKKRL L++ EI+KL +YA+LE+
Sbjct: 401 IKMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDEASKKRLGLLEDEIDKLGREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK ++ S +KEEI+K+R ++ R+ V++++YG+L +LE LK
Sbjct: 461 VWKSEKAQVQGSAHLKEEIDKLRGEMADLQRQGKLDKVAEIQYGKLPQLEAQLKHA---- 516
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ F LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KL+++E+ L RVVGQD
Sbjct: 517 -EASGEKPVFKLLRTEVGAEEIAEVVSRATGIPVSKMMQGERDKLMHMEDHLHGRVVGQD 575
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++ VS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ E ++RIDM
Sbjct: 576 EAVAVVSDAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTELCKTLAEYLFDSAEHMVRIDM 635
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DEIEKA+ DVFN+LLQ+L
Sbjct: 636 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDEIEKAHPDVFNVLLQVL 695
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+IVMTSNLGS I++M D +++KLAV+ EVK YFRPEFIN
Sbjct: 696 DDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQQMSGDDYQVVKLAVLGEVKSYFRPEFIN 755
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ NI SIA IQL L+ +L M M L ++ AAL +I+ GFD +YGAR
Sbjct: 756 RIDEVVVFHALSESNIASIARIQLKALEARLAAMEMKLDVTDAALAEIAKAGFDPVYGAR 815
>gi|261377553|ref|ZP_05982126.1| ATP-dependent chaperone protein ClpB [Neisseria cinerea ATCC 14685]
gi|269146293|gb|EEZ72711.1| ATP-dependent chaperone protein ClpB [Neisseria cinerea ATCC 14685]
Length = 857
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 555/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKETDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++I+ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQIDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEIVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 810
Query: 668 LIYGAR 673
IYGAR
Sbjct: 811 PIYGAR 816
>gi|220933996|ref|YP_002512895.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995306|gb|ACL71908.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 859
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/667 (64%), Positives = 553/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L ++++L LD+ L+AG K+RGEFE+RLK +L ++S + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNRRLLSLDMGALIAGAKFRGEFEERLKAVLNDLSKQEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAAMLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K+E DE+S+KRL ++ EI+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEEMDRLERRLIQLKIEREALKKESDEASRKRLDTLEGEIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+A+L++IWK EK + + IKEE+E+ RL++ A R D +S+L+YG + +LE+ L
Sbjct: 455 FADLDEIWKAEKAALSGTAHIKEELERARLELETARRAGDLARMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++ ++ LL+ KV EEIAE+VSR TGIPVSK+++ EREKLL +E L
Sbjct: 515 MAAQAEM------HEMRLLRNKVSDEEIAEVVSRWTGIPVSKMLEGEREKLLRMEEALTT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ AVSNAIRRSR+GLSD +RP GSF+FLGPTGVGKTEL K L+A +F+ EE+
Sbjct: 569 RVVGQSEAVKAVSNAIRRSRAGLSDPRRPNGSFLFLGPTGVGKTELTKALAAFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+EM + E +K AVM V +
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQIIQEMAGEEHYEAMKAAVMEVVGSH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+++VF L R+ I SI +IQL+ L+ ++ + ++ L++S+AAL ++ GF
Sbjct: 749 FRPEFINRVDEVVVFHPLGREQIRSITSIQLDDLRKRMAERDLKLEVSEAALDRLGEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|254468710|ref|ZP_05082116.1| ATP-dependent chaperone ClpB [beta proteobacterium KB13]
gi|207087520|gb|EDZ64803.1| ATP-dependent chaperone ClpB [beta proteobacterium KB13]
Length = 863
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/666 (65%), Positives = 565/666 (84%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E H L+KYTIDLT AR GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 ENHRQSLQKYTIDLTYLARDGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I+EGLAQRI+N EVP+SL +K++L LD+A LLAG KYRG+FE+RLK +LKEI+ +Q +II
Sbjct: 215 IIEGLAQRIVNQEVPDSLKNKQVLSLDMASLLAGAKYRGDFEERLKAVLKEINASQGNII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYR Y+EKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTEGAMDAGNMLKPALARGELHCVGATTLNEYRMYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K++++EP++E TI+ILRGLQ+KYE+HH VEITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVMIDEPNVEATIAILRGLQEKYELHHNVEITDPAIVAAAELSNRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IKIEIDSKPE +DKLERRL+QLKIE EA+K++ D +SK+R +I+ EI K+E +
Sbjct: 395 DEAASRIKIEIDSKPEQLDKLERRLVQLKIEREAVKKDKDAASKERFEIIESEIKKIEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+A+LE+IWK EK + ++ IKE++E +++ + + RK +WQ VS+L+YGE+ +LE LK
Sbjct: 455 FADLEEIWKSEKATLIGAKGIKEKLESLKISMEEEKRKGNWQRVSELQYGEIPQLEEQLK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D+ P + NK +L+T+VG++EIAE+VSR TGIPV+K++Q E+EKL+N+E++L +
Sbjct: 515 ---KADVTKPASQNK--MLRTEVGADEIAEVVSRATGIPVAKMMQGEKEKLINMESVLHQ 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ ++SNAIRRSRSGLSD RPYGSF+FLGPTGVGKTEL K+L++ +F++EE
Sbjct: 570 RVVGQDEAVKSISNAIRRSRSGLSDEGRPYGSFLFLGPTGVGKTELSKSLASFLFDSEEH 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 630 LIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+LD+GRLTD +G+T++F+NT+I+MTSNLGS+ I++M + D ++IK++VM EVK YF
Sbjct: 690 VLLQVLDEGRLTDGKGKTVDFKNTVIIMTSNLGSNLIQKMTQDDYQVIKISVMAEVKNYF 749
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
+PEFINRIDD++VF L +++ I QL L KL K+ + K++ A+ +I GFD
Sbjct: 750 KPEFINRIDDVVVFHGLGERHLHDITKNQLENLLLKLKKIGIQAKVTDRAIFEIGKAGFD 809
Query: 668 LIYGAR 673
IYGAR
Sbjct: 810 PIYGAR 815
>gi|225023847|ref|ZP_03713039.1| hypothetical protein EIKCOROL_00713 [Eikenella corrodens ATCC
23834]
gi|224943321|gb|EEG24530.1| hypothetical protein EIKCOROL_00713 [Eikenella corrodens ATCC
23834]
Length = 857
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/667 (64%), Positives = 559/667 (83%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 -EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+S D + N L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L
Sbjct: 515 AAESNADGKKQNK-----LFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLH 569
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 570 RRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED 629
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVF
Sbjct: 630 HLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVF 689
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
NILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K AVM+EVK Y
Sbjct: 690 NILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKKAVMDEVKAY 749
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPE INRID+++VF L+++NI SIA IQL L+ +L ++ LK+ AAL I+ GF
Sbjct: 750 FRPEMINRIDEVVVFHGLDQENIRSIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAEAGF 809
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 810 DPVYGAR 816
>gi|350570807|ref|ZP_08939153.1| chaperone protein ClpB [Neisseria wadsworthii 9715]
gi|349794755|gb|EGZ48565.1| chaperone protein ClpB [Neisseria wadsworthii 9715]
Length = 857
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/705 (62%), Positives = 571/705 (80%), Gaps = 27/705 (3%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTTDLTQRAREGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI++GEVP+SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +IFIDE+
Sbjct: 221 QRIVDGEVPDSLRNKRLLVLDLAALIAGAKYRGEFEERLKAVLNDLAKDDGNTLIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQK+LV E
Sbjct: 281 HTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+E+DSKPE MDKL+RR+IQLK+E +++E D++SKKRL LI +EI L+ +YA+L++
Sbjct: 401 IKMELDSKPEQMDKLDRRIIQLKMERMHVEKESDDASKKRLDLIDEEIAGLQKEYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + IK++I+ +++KI +A R+ D+ S+L+YGEL KL SQ+
Sbjct: 461 IWKAEKAASAGTADIKKQIDDIKVKIEQAKRQGDFARASELEYGELPKL-------SQQL 513
Query: 374 IQLPNN-----ANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKR 428
L NN ANK L +TKVG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L R
Sbjct: 514 QALENNPQEQQANK--LFRTKVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHNR 571
Query: 429 VVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESI 488
VVGQDEA+ AVSNAIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L++ +F++E+ +
Sbjct: 572 VVGQDEAVRAVSNAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALASFLFDSEDHL 631
Query: 489 IRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNI 548
IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNI
Sbjct: 632 IRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNI 691
Query: 549 LLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFR 608
LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +FR
Sbjct: 692 LLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHHIQQMGTSDYEAVKEVVMEDVKEHFR 751
Query: 609 PEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDL 668
PE INRID+++VF L++ NI SIA IQL L+ +L N+ LK+ AAL I+ GFD
Sbjct: 752 PEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLAAQNLHLKVDDAALDIIAKAGFDP 811
Query: 669 IYGARDVHGCKK-------SLSILLKK------IHKKSPEANFIF 700
+YGAR + + +L++L K IH K+ N IF
Sbjct: 812 VYGARPLKRAIQAEIENPLALALLEGKYQPESVIHVKADGDNLIF 856
>gi|387128271|ref|YP_006296876.1| clpB protein [Methylophaga sp. JAM1]
gi|386275333|gb|AFI85231.1| ClpB protein [Methylophaga sp. JAM1]
Length = 861
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/667 (64%), Positives = 551/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG K+RGEFE+RLK +L ++S + II
Sbjct: 215 IVEGLAQRIVNGEVPEGMKNKRVLALDMGSLIAGAKFRGEFEERLKAVLSDLSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E TI+ILRGL ++YEVHHGV+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVGEPSVESTIAILRGLSERYEVHHGVDITDPAIVAAATLSHRYITDRNLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLKIE A+++E DE+SKKRL ++ E+ KL +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKIERVALQKESDEASKKRLDTLETEMKKLARE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EK + SQ IKEE+EK RL++ A R + + +S+L+YG + LE+ L
Sbjct: 455 YTDLEEVWKSEKAALHGSQHIKEELEKARLELESANRSGNLEKMSELQYGRIPALEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q FTLL+ +VG EEIAE+VS+ TGIPVSK+++ ER+KLL ++ L +
Sbjct: 515 IATQAEMQ------DFTLLRNRVGEEEIAEVVSKWTGIPVSKMLEGERDKLLKMDEALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+++V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ EE+
Sbjct: 569 RVIGQDEAVNSVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSLATFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I+EM DK + +K AVM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSNVIQEMAGEDKYDTMKNAVMEIVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+DD++VF L + I +IA+IQL+ L+ +L + M L++S AAL +S GF
Sbjct: 749 FRPEFINRVDDVVVFHPLQKSQIHAIADIQLSHLRQRLAEKEMGLELSDAALDMLSEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|429743828|ref|ZP_19277364.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 020
str. F0370]
gi|429164509|gb|EKY06640.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 020
str. F0370]
Length = 860
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 554/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARNGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E +++E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMERMHVEKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++I++++ KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQIDEIKFKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPV+K+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVAKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF LN+ NI SIA IQL L+ +L N+ L + AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLNQANIRSIAKIQLKGLEKRLAAQNLRLNVDDAALDLIAQAGFD 810
Query: 668 LIYGAR 673
+YGAR
Sbjct: 811 PVYGAR 816
>gi|345875625|ref|ZP_08827416.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri LMG 5135]
gi|417958313|ref|ZP_12601228.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri ATCC 51223]
gi|343966971|gb|EGV35222.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri ATCC 51223]
gi|343968700|gb|EGV36924.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri LMG 5135]
Length = 857
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/671 (64%), Positives = 559/671 (83%), Gaps = 14/671 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTLDLTQRAREGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI++GEVP+SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVDGEVPDSLRNKRLLVLDLAALIAGAKYRGEFEERLKAVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSNRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E +++E D++SKKRL LI +EI L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMERMHVEKESDDASKKRLDLIDEEIAGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++I+ +++KI +A R+ D+ S+L+YGEL KL
Sbjct: 455 YADLDEIWKAEKAASAGTADIKKQIDDIKVKIEQAKRQGDFARASELEYGELPKL----- 509
Query: 368 EKSQKDIQLPNN-----ANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIE 422
SQ+ L NN ANK L +TKVG++E+AEIVSR TGIPVSK+++ ER+KLL +E
Sbjct: 510 --SQQLQALENNPQEQQANK--LFRTKVGADEVAEIVSRMTGIPVSKMMEGERDKLLKME 565
Query: 423 NLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIF 482
+L RVVGQ+EA+ AVSNAIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L++ +F
Sbjct: 566 EVLHNRVVGQNEAVRAVSNAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALASFLF 625
Query: 483 NNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKAN 542
++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+
Sbjct: 626 DSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAH 685
Query: 543 SDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNE 602
DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +
Sbjct: 686 PDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHHIQQMGTSDYEAVKEVVMED 745
Query: 603 VKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKIS 662
VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L N+ LK+ AAL I+
Sbjct: 746 VKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLAAQNLHLKVDDAALDLIA 805
Query: 663 NIGFDLIYGAR 673
GFD +YGAR
Sbjct: 806 KAGFDPVYGAR 816
>gi|296314090|ref|ZP_06864031.1| ATP-dependent chaperone protein ClpB [Neisseria polysaccharea ATCC
43768]
gi|296839347|gb|EFH23285.1| ATP-dependent chaperone protein ClpB [Neisseria polysaccharea ATCC
43768]
Length = 857
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 555/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPV+K+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVAKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 810
Query: 668 LIYGAR 673
IYGAR
Sbjct: 811 PIYGAR 816
>gi|319778197|ref|YP_004129110.1| ClpB protein [Taylorella equigenitalis MCE9]
gi|397661981|ref|YP_006502681.1| chaperone protein ClpB [Taylorella equigenitalis ATCC 35865]
gi|317108221|gb|ADU90967.1| ClpB protein [Taylorella equigenitalis MCE9]
gi|394350160|gb|AFN36074.1| chaperone protein ClpB [Taylorella equigenitalis ATCC 35865]
gi|399115894|emb|CCG18699.1| chaperone protein ClpB [Taylorella equigenitalis 14/56]
Length = 856
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/660 (65%), Positives = 555/660 (84%), Gaps = 7/660 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT DLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTTDLTERARMGKLDPVIGRDDEIRRAIQILQRRSKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP SL K++L LD+A LLAG K+RGEFE+RLK +LKE++ ++ + I+FIDE+
Sbjct: 220 QRIVNDEVPESLRGKRVLSLDMASLLAGAKFRGEFEERLKAVLKELAQDEGNNIVFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G G EG+IDAGNMLKP LSRGELHCIGATTL+EYR+YIEKDAA ERRFQK+L++E
Sbjct: 280 HTMVGAGGAEGAIDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDAALERRFQKVLIDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGL+++YE+HHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PDVEATIAILRGLKERYEIHHGVEITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MD+L+RR+IQLKIE EA++RE DE+SK+RL LI+ E+ +L+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDRLDRRIIQLKIEREAVRREDDEASKRRLQLIEDELARLQREYDDYEQ 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK+ + Q I+E+I+KV+ ++ + R+ +++ +S+L+YG+L LE LK + +
Sbjct: 460 IWKAEKSSVHSVQSIREDIDKVKAQMAEYQRQGEYEKLSELQYGKLPDLELRLKSAEKGE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ K LL+T+VG+EEIAE+VSR TGIPVSK++Q ER KLL +E+ L +RVVGQD
Sbjct: 520 V-------KNQLLRTEVGTEEIAEVVSRATGIPVSKMMQGERAKLLTMEDRLHERVVGQD 572
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GL+D +PYGSF+FLGPTGVGKTEL K L+ +F+++E ++RIDM
Sbjct: 573 EAVRLVSDAIRRSRAGLADPSKPYGSFLFLGPTGVGKTELTKALANFLFDSDEHMVRIDM 632
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH+++RLIGAPPGYIGYEEGGYLTE +RRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 633 SEFMEKHTVARLIGAPPGYIGYEEGGYLTEAIRRKPYSVILLDEIEKAHPDVFNILLQVL 692
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+IVMTSN+GS +I++M E IK V +E+K FRPEF+N
Sbjct: 693 DDGRLTDGQGRTVDFRNTVIVMTSNIGSQQIQKMSGEPYEKIKDVVWDELKDSFRPEFLN 752
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I+VF L ++ I +IA IQ+ L +L + M+L+IS A+ KI+ GFD ++GAR
Sbjct: 753 RIDEIVVFHGLEKEQIANIAKIQIKRLAQRLAQFEMNLEISDEAIAKIAEAGFDPVFGAR 812
>gi|261380959|ref|ZP_05985532.1| ATP-dependent chaperone protein ClpB [Neisseria subflava NJ9703]
gi|284796218|gb|EFC51565.1| ATP-dependent chaperone protein ClpB [Neisseria subflava NJ9703]
Length = 857
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 554/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTTDIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH++SRLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L ++ LK+ AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAEAGFD 810
Query: 668 LIYGAR 673
+YGAR
Sbjct: 811 PVYGAR 816
>gi|254674233|emb|CBA10017.1| ATP-dependent protease, ATPase subunit [Neisseria meningitidis
alpha275]
Length = 859
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|268597099|ref|ZP_06131266.1| chaperone clpB [Neisseria gonorrhoeae FA19]
gi|268603397|ref|ZP_06137564.1| ClpB protein [Neisseria gonorrhoeae PID1]
gi|268681877|ref|ZP_06148739.1| ClpB protein [Neisseria gonorrhoeae PID332]
gi|268550887|gb|EEZ45906.1| chaperone clpB [Neisseria gonorrhoeae FA19]
gi|268587528|gb|EEZ52204.1| ClpB protein [Neisseria gonorrhoeae PID1]
gi|268622161|gb|EEZ54561.1| ClpB protein [Neisseria gonorrhoeae PID332]
Length = 857
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 555/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 810
Query: 668 LIYGAR 673
IYGAR
Sbjct: 811 PIYGAR 816
>gi|313668136|ref|YP_004048420.1| ClpB protein [Neisseria lactamica 020-06]
gi|313005598|emb|CBN87035.1| ClpB protein [Neisseria lactamica 020-06]
Length = 857
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 554/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGGPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 810
Query: 668 LIYGAR 673
IYGAR
Sbjct: 811 PIYGAR 816
>gi|421551086|ref|ZP_15997086.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69166]
gi|433471850|ref|ZP_20429233.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 68094]
gi|433477915|ref|ZP_20435233.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70012]
gi|433522194|ref|ZP_20478881.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 61103]
gi|433526339|ref|ZP_20482969.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69096]
gi|433539247|ref|ZP_20495722.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70030]
gi|402328620|gb|EJU63987.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69166]
gi|432207807|gb|ELK63795.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 68094]
gi|432214731|gb|ELK70627.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70012]
gi|432258572|gb|ELL13854.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 61103]
gi|432261103|gb|ELL16360.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69096]
gi|432272970|gb|ELL28072.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70030]
Length = 859
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/668 (64%), Positives = 555/668 (83%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE--RI 365
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE R
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 366 LKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L
Sbjct: 515 AAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVL 570
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E
Sbjct: 571 HRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSE 630
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DV
Sbjct: 631 DHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDV 690
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 605
FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK
Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKE 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ G
Sbjct: 751 HFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAG 810
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 811 FDPIYGAR 818
>gi|319638313|ref|ZP_07993076.1| chaperone ClpB [Neisseria mucosa C102]
gi|317400586|gb|EFV81244.1| chaperone ClpB [Neisseria mucosa C102]
Length = 857
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 553/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E DE+SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDEASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PEGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L ++ LK+ AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAKAGFD 810
Query: 668 LIYGAR 673
+YGAR
Sbjct: 811 PVYGAR 816
>gi|421542768|ref|ZP_15988873.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM255]
gi|402316565|gb|EJU52108.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM255]
Length = 859
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|385855517|ref|YP_005902030.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240355]
gi|325204458|gb|ADY99911.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240355]
Length = 859
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|416169730|ref|ZP_11608208.1| ATP-dependent chaperone ClpB [Neisseria meningitidis OX99.30304]
gi|325130543|gb|EGC53296.1| ATP-dependent chaperone ClpB [Neisseria meningitidis OX99.30304]
Length = 859
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|325267605|ref|ZP_08134257.1| chaperone protein ClpB [Kingella denitrificans ATCC 33394]
gi|324980955|gb|EGC16615.1| chaperone protein ClpB [Kingella denitrificans ATCC 33394]
Length = 858
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/661 (65%), Positives = 549/661 (83%), Gaps = 5/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERAREGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +IFIDE+
Sbjct: 221 QRIVNGEVPESLRGKRLLVLDLAALIAGAKYRGEFEERLKAVLNDLAQDDGNTLIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQK+LV E
Sbjct: 281 HTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ +YE+HHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEDTIAILRGLQDRYEIHHGVEITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IKIE ++KPE MDKL+RR+IQLK+E + +E DE+SKKRL LI +EI LE +YA+L++
Sbjct: 401 IKIEKETKPEQMDKLDRRIIQLKMEKMHVSKESDEASKKRLALIDEEIAGLEKEYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK +K +I++++ KI +A R D+ S+L+YGEL KL LK+ +
Sbjct: 461 VWKAEKASAVSLTDLKAQIDEIKHKIEQAKRVGDYGLASELEYGELPKLTLQLKDAERAG 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q N TL +T+VG+EEIAEIVSR TGIPVSK+++ EREKLL +E++L RVVGQD
Sbjct: 521 NQKTTN----TLFRTEVGAEEIAEIVSRMTGIPVSKMMEGEREKLLRMEDVLHNRVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL++ +F++E+ +IR+DM
Sbjct: 577 EAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTLASFLFDSEDHLIRVDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 637 SEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT++VMTSN+GS I+E+ + E +K AVM +VK YFRPE I
Sbjct: 697 DDGRLTDGQGRTVDFKNTVVVMTSNIGSQHIQELGAEAPYEAVKAAVMADVKDYFRPELI 756
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L + +I IA IQL+ LK +L + L++S AAL ++ GFD IYGA
Sbjct: 757 NRIDEVVVFHALGQAHIRRIAQIQLDGLKKRLEAQGLYLQVSDAALDVLAKAGFDPIYGA 816
Query: 673 R 673
R
Sbjct: 817 R 817
>gi|225075318|ref|ZP_03718517.1| hypothetical protein NEIFLAOT_00321 [Neisseria flavescens
NRL30031/H210]
gi|224953493|gb|EEG34702.1| hypothetical protein NEIFLAOT_00321 [Neisseria flavescens
NRL30031/H210]
Length = 857
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 555/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLSAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLDQANIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 810
Query: 668 LIYGAR 673
+YGAR
Sbjct: 811 PVYGAR 816
>gi|161870340|ref|YP_001599510.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Neisseria
meningitidis 053442]
gi|161595893|gb|ABX73553.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Neisseria
meningitidis 053442]
Length = 859
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|421563669|ref|ZP_16009485.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2795]
gi|421564898|ref|ZP_16010685.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3081]
gi|421907229|ref|ZP_16337113.1| Chaperone protein clpB Heat shock protein F84,1 [Neisseria
meningitidis alpha704]
gi|433507471|ref|ZP_20464376.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9757]
gi|393291645|emb|CCI73100.1| Chaperone protein clpB Heat shock protein F84,1 [Neisseria
meningitidis alpha704]
gi|402340154|gb|EJU75357.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2795]
gi|402345503|gb|EJU80619.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3081]
gi|432240488|gb|ELK96023.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9757]
Length = 859
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAQAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|422111082|ref|ZP_16380853.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378342|emb|CBX23039.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 857
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 554/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPV+K+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVAKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDTALDIIAKAGFD 810
Query: 668 LIYGAR 673
IYGAR
Sbjct: 811 PIYGAR 816
>gi|433513789|ref|ZP_20470577.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63049]
gi|432246436|gb|ELL01883.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63049]
Length = 859
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/668 (64%), Positives = 555/668 (83%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE--RI 365
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE R
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 366 LKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L
Sbjct: 515 AAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVL 570
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E
Sbjct: 571 HRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSE 630
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DV
Sbjct: 631 DHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDV 690
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 605
FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK
Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKE 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ G
Sbjct: 751 HFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAG 810
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 811 FDPIYGAR 818
>gi|433497165|ref|ZP_20454199.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7089]
gi|433499232|ref|ZP_20456239.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7124]
gi|433501197|ref|ZP_20458181.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM174]
gi|432232878|gb|ELK88513.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7089]
gi|432233659|gb|ELK89285.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7124]
gi|432235003|gb|ELK90622.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM174]
Length = 859
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMSIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|240014358|ref|ZP_04721271.1| putative ClpB protein [Neisseria gonorrhoeae DGI18]
gi|240016791|ref|ZP_04723331.1| putative ClpB protein [Neisseria gonorrhoeae FA6140]
gi|240121920|ref|ZP_04734882.1| putative ClpB protein [Neisseria gonorrhoeae PID24-1]
gi|291044107|ref|ZP_06569823.1| ClpB protein [Neisseria gonorrhoeae DGI2]
gi|291012570|gb|EFE04559.1| ClpB protein [Neisseria gonorrhoeae DGI2]
Length = 857
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 554/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVA +ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVATAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 810
Query: 668 LIYGAR 673
IYGAR
Sbjct: 811 PIYGAR 816
>gi|268601078|ref|ZP_06135245.1| chaperone clpB [Neisseria gonorrhoeae PID18]
gi|268585209|gb|EEZ49885.1| chaperone clpB [Neisseria gonorrhoeae PID18]
Length = 857
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 554/666 (83%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVA +ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVATAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+YGEL KL L+
Sbjct: 455 YADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 571 RVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 631 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 751 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 810
Query: 668 LIYGAR 673
IYGAR
Sbjct: 811 PIYGAR 816
>gi|433468650|ref|ZP_20426085.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98080]
gi|432205869|gb|ELK61885.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98080]
Length = 859
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EI+ LE +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDGLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSNAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|418290904|ref|ZP_12902993.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM220]
gi|421544792|ref|ZP_15990865.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM140]
gi|421546880|ref|ZP_15992921.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM183]
gi|421549129|ref|ZP_15995147.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2781]
gi|421552237|ref|ZP_15998216.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM576]
gi|372200802|gb|EHP14820.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM220]
gi|402322356|gb|EJU57818.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM183]
gi|402322705|gb|EJU58156.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM140]
gi|402324519|gb|EJU59951.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2781]
gi|402332390|gb|EJU67717.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM576]
Length = 859
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|218768467|ref|YP_002342979.1| ClpB protein [Neisseria meningitidis Z2491]
gi|433480088|ref|ZP_20437375.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63041]
gi|433519182|ref|ZP_20475905.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 65014]
gi|433541327|ref|ZP_20497775.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63006]
gi|54035904|sp|Q9JTP9.1|CLPB_NEIMA RecName: Full=Chaperone protein ClpB
gi|121052475|emb|CAM08814.1| ClpB protein [Neisseria meningitidis Z2491]
gi|432215048|gb|ELK70939.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63041]
gi|432256110|gb|ELL11434.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 65014]
gi|432276868|gb|ELL31922.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63006]
Length = 859
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|121635155|ref|YP_975400.1| ClpB protein [Neisseria meningitidis FAM18]
gi|433494997|ref|ZP_20452063.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM762]
gi|120866861|emb|CAM10620.1| ClpB protein [Neisseria meningitidis FAM18]
gi|432229385|gb|ELK85073.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM762]
Length = 859
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|418288652|ref|ZP_12901108.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM233]
gi|372201432|gb|EHP15363.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM233]
Length = 859
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/668 (64%), Positives = 555/668 (83%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EI+ LE +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDGLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE--RI 365
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE R
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 366 LKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L
Sbjct: 515 AAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVL 570
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E
Sbjct: 571 HRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSE 630
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DV
Sbjct: 631 DHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDV 690
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 605
FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK
Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKE 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ G
Sbjct: 751 HFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAG 810
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 811 FDPIYGAR 818
>gi|416212795|ref|ZP_11622019.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240013]
gi|325144759|gb|EGC67052.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240013]
Length = 859
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|385323885|ref|YP_005878324.1| chaperone ClpB (short) [Neisseria meningitidis 8013]
gi|261392272|emb|CAX49792.1| chaperone ClpB (short) [Neisseria meningitidis 8013]
Length = 805
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 101 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 160
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 161 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 220
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 221 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 280
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 281 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 340
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 341 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 400
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 401 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 460
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 461 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 518
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 519 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 578
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 579 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 638
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 639 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 698
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 699 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 758
Query: 668 LIYGAR 673
IYGAR
Sbjct: 759 PIYGAR 764
>gi|254805248|ref|YP_003083469.1| putative ClpB protein [Neisseria meningitidis alpha14]
gi|254668790|emb|CBA06732.1| putative ClpB protein [Neisseria meningitidis alpha14]
Length = 859
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|304387133|ref|ZP_07369380.1| chaperone protein ClpB [Neisseria meningitidis ATCC 13091]
gi|304338785|gb|EFM04892.1| chaperone protein ClpB [Neisseria meningitidis ATCC 13091]
Length = 859
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 553/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++ AGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMAAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|385341628|ref|YP_005895499.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240149]
gi|385857525|ref|YP_005904037.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NZ-05/33]
gi|416187148|ref|ZP_11614127.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M0579]
gi|325136561|gb|EGC59163.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M0579]
gi|325201834|gb|ADY97288.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240149]
gi|325208414|gb|ADZ03866.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NZ-05/33]
Length = 859
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|416182624|ref|ZP_11612099.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M13399]
gi|325134551|gb|EGC57195.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M13399]
Length = 859
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/668 (64%), Positives = 555/668 (83%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE--RI 365
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE R
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 366 LKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L
Sbjct: 515 AAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVL 570
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E
Sbjct: 571 HRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSE 630
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DV
Sbjct: 631 DHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDV 690
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 605
FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK
Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKE 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ G
Sbjct: 751 HFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAG 810
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 811 FDPIYGAR 818
>gi|421540725|ref|ZP_15986866.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93004]
gi|402317972|gb|EJU53498.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93004]
Length = 859
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/668 (64%), Positives = 555/668 (83%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE--RI 365
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE R
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 366 LKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L
Sbjct: 515 AAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVL 570
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E
Sbjct: 571 HRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSE 630
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DV
Sbjct: 631 DHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDV 690
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 605
FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK
Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKE 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ G
Sbjct: 751 HFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAG 810
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 811 FDPIYGAR 818
>gi|335042180|ref|ZP_08535207.1| ATPase with chaperone activity, ATP-binding subunit [Methylophaga
aminisulfidivorans MP]
gi|333788794|gb|EGL54676.1| ATPase with chaperone activity, ATP-binding subunit [Methylophaga
aminisulfidivorans MP]
Length = 861
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/667 (63%), Positives = 554/667 (83%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ + +K++L LD+ L+AG K+RGEFE+RLK +L ++S + II
Sbjct: 215 IVEGLAQRIVNGEVPDGMKNKRVLALDMGSLIAGAKFRGEFEERLKAVLNDLSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K++V EP +E TI+ILRGL ++YEVHHGV+ITDPAIVAA+ LS RYI+DR +PDKAIDLI
Sbjct: 335 KVIVGEPTVESTIAILRGLAERYEVHHGVDITDPAIVAAATLSNRYITDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLKIE A+K++ D++SKKRL ++ E+ KL +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKIERMALKKQSDDASKKRLETLETEMKKLARE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EK + SQ +KEE+EK RL+++ A R +D++ ++KL+YG + +LE+ LK
Sbjct: 455 YTDLEEVWKSEKASLHGSQHVKEELEKARLELDAANRSADYEKMAKLQYGRIPELEKQLK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ ++Q +FTLL+ KVG EEIAE+VS+ TGIPVSK+++ ER+KLL +++ L +
Sbjct: 515 LATEAEMQ------EFTLLRNKVGEEEIAEVVSKWTGIPVSKMLEGERDKLLKMDDALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
V+GQDEA+S+V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ +++
Sbjct: 569 TVIGQDEAVSSVANAIRRSRAGLSDPHRPNGSFLFLGPTGVGKTELCKSLANFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+EM + + +K AVM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSSVIQEMAGEENYDAMKAAVMEIVSQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+DD++VF L + I +IA IQL+ L+ +L + +M L +S AL I++ GF
Sbjct: 749 FRPEFINRVDDVVVFHPLQQAQIRAIAEIQLSHLRARLAERDMKLMLSDEALDLIASEGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|433509683|ref|ZP_20466547.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 12888]
gi|433511680|ref|ZP_20468500.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 4119]
gi|432246061|gb|ELL01522.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 12888]
gi|432246327|gb|ELL01778.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 4119]
Length = 859
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|404379863|ref|ZP_10984912.1| chaperone ClpB [Simonsiella muelleri ATCC 29453]
gi|294484380|gb|EFG32063.1| chaperone ClpB [Simonsiella muelleri ATCC 29453]
Length = 857
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/661 (65%), Positives = 553/661 (83%), Gaps = 6/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTTDLTERARNGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL K++L+LD+A L+AG K+RGEFE+RLK +L +++ + + +IFIDE+
Sbjct: 221 QRIVNGEVPESLRGKRLLVLDLAALIAGAKFRGEFEERLKAVLNDLAKDDGNSLIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEATIAILRGLQERYEIHHGVDITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+E+DSKPE MDKL+RR+IQL++E + +E D++SKKRL LI +EI L+ +YA+L++
Sbjct: 401 IKMELDSKPEQMDKLDRRIIQLQMEKMHVAKETDDASKKRLALIDEEIASLQKEYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK S IK++I+ ++LKI +A R D+ S+L+YG+L L + L+ D
Sbjct: 461 IWKAEKAASSSSADIKKQIDDLKLKIEQAKRAGDYAKASELEYGQLPNLTQQLQ---AAD 517
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ NK L +T+VG+EEIAEIVSR TGIPVSK+++ ER+KLL +E +L KRV+GQD
Sbjct: 518 VSGSLKTNK--LFRTQVGAEEIAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHKRVIGQD 575
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL++ +F++E+ +IRIDM
Sbjct: 576 EAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTLASFLFDSEDHLIRIDM 635
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 636 SEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL 695
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + D + +K AVM +VK YFRPE I
Sbjct: 696 DDGRLTDGQGRTVDFKNTVIVMTSNIGSQNIQNMGDTSDYDAVKAAVMEDVKAYFRPELI 755
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF LN+ NI +IA IQL LK +L N+ L++S AAL I+ GFD IYGA
Sbjct: 756 NRIDEVVVFHGLNQANIRNIAQIQLGSLKRRLAAQNLRLEVSDAALDLIAESGFDPIYGA 815
Query: 673 R 673
R
Sbjct: 816 R 816
>gi|385850947|ref|YP_005897462.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M04-240196]
gi|325205770|gb|ADZ01223.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M04-240196]
Length = 859
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|187478914|ref|YP_786938.1| ATP-dependent protease ATPase subunit [Bordetella avium 197N]
gi|115423500|emb|CAJ50034.1| ATP-dependent protease, ATPase subunit (chaperone) [Bordetella
avium 197N]
Length = 867
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/663 (64%), Positives = 558/663 (84%), Gaps = 3/663 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERAREGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE+S + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAGLLAGAKFRGEFEERLKAVLKELSQDDGQNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 340 PDVESTIAILRGLQERYEIHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++S +RL I++E+ +L+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASLRRLAAIEEELERLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK--EKSQ 371
+WK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG+L +LE LK + ++
Sbjct: 460 VWKAEKAAVQGAQSIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAADMAE 519
Query: 372 KDIQLPN-NANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVV 430
DI+ + K LL+T+VG+EEIAE+VSR TGIPVSK+++ ER+KLL++E+ L KRVV
Sbjct: 520 SDIERAEAKSGKPKLLRTQVGAEEIAEVVSRATGIPVSKMMEGERDKLLHMEDALHKRVV 579
Query: 431 GQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIR 490
GQDEA+S V++AIRRSR+GL+D +PYGSF+FLGPTGVGKTEL + L+ +F++EE +IR
Sbjct: 580 GQDEAVSLVADAIRRSRAGLADPSKPYGSFLFLGPTGVGKTELTRALADFLFDSEEHLIR 639
Query: 491 IDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILL 550
IDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LL
Sbjct: 640 IDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLL 699
Query: 551 QILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPE 610
Q+LDDG LTD +GRT++FRNT+IVMTSNLGS +I+ M E+IK VM E+K RPE
Sbjct: 700 QVLDDGGLTDGQGRTVDFRNTVIVMTSNLGSQQIQSMSGKPYEVIKDVVMEELKQTLRPE 759
Query: 611 FINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIY 670
F+NRID+++VF L+ ++I SIA IQ+ L ++L K M L +S AAL +I+ +GFD ++
Sbjct: 760 FLNRIDEVVVFHGLDAQHIESIARIQIKRLASRLEKQEMRLDVSDAALSEIALVGFDPVF 819
Query: 671 GAR 673
GAR
Sbjct: 820 GAR 822
>gi|399117309|emb|CCG20123.1| chaperone protein ClpB [Taylorella asinigenitalis 14/45]
Length = 856
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/660 (65%), Positives = 552/660 (83%), Gaps = 7/660 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT DLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTTDLTERARMGKLDPVIGRDDEIRRAIQILQRRSKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP SL K++L LD+A LLAG K+RGEFE+RLK +LKE++ ++ + I+FIDE+
Sbjct: 220 QRIVNDEVPESLRGKRVLSLDMASLLAGAKFRGEFEERLKAVLKELAQDEGNNIVFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G G EG+IDAGNMLKP LSRGELHCIGATTL+EYR+YIEKDAA ERRFQK+L++E
Sbjct: 280 HTMVGAGGAEGAIDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDAALERRFQKVLIDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGL+++YE+HHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PDVEATIAILRGLKERYEIHHGVEITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MD+L+RR+IQLKIE EA++RE DE+SK+RL LI+ E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDRLDRRIIQLKIEREAVRREDDEASKRRLQLIEDELAKLQREYDDYEQ 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK+ + Q I+E+I+KV+ ++ + R+ +++ +S+L+YG+L LE LK + +
Sbjct: 460 IWKAEKSSVHGVQSIREDIDKVKAQMAEYQRQGEYEKLSELQYGKLPDLELRLKSAEKGE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER KLL +E+ L +RVVGQD
Sbjct: 520 V-------KNQLLRTEVGTEEIAEVVSRATGIPVAKMMQGERAKLLTMEDRLHERVVGQD 572
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GLSD +PYGSF+FLGPTGVGKTEL K L+ +F++++ ++RIDM
Sbjct: 573 EAVRLVSDAIRRSRAGLSDPSKPYGSFLFLGPTGVGKTELTKALANFLFDSDDHMVRIDM 632
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH+++RLIGAPPGYIGYEEGGYLTE +RRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 633 SEFMEKHTVARLIGAPPGYIGYEEGGYLTEAIRRKPYSVILLDEIEKAHPDVFNILLQVL 692
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+IVMTSN+GS I++M E IK V +E+K FRPEF+N
Sbjct: 693 DDGRLTDGQGRTVDFRNTVIVMTSNIGSQHIQKMSGEPYEKIKDVVWDELKNSFRPEFLN 752
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I+VF L + I +IA IQ+ L +L + M L+IS A+ KI+ GFD ++GAR
Sbjct: 753 RIDEIVVFHGLEQDQIANIAKIQIKRLAQRLGQFEMKLEISDEAIAKIAEAGFDPVFGAR 812
>gi|407715566|ref|YP_006836846.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Cycloclasticus sp. P1]
gi|407255902|gb|AFT66343.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Cycloclasticus sp. P1]
Length = 859
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/667 (63%), Positives = 557/667 (83%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KY+IDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALEKYSIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP +L SK++L LD+A L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPENLKSKRLLSLDMAALIAGAKFRGEFEERLKAVLNDVSKQEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHH V+ITDPAIV+A+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEVHHSVDITDPAIVSAAVLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DE+A++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D++S KRL L++ EI++L+ +
Sbjct: 395 DESASRIRMEMDSKPESMDRLERRLIQLKIEREALKKETDDASIKRLQLLETEIDQLDKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++WK EK ++ S Q KEE+EKV+L++ A R D +S+L+YGE+ +LE+ ++
Sbjct: 455 YADLEEVWKSEKAAMQGSAQHKEELEKVKLEMETARRAGDLTRMSELQYGEIPRLEKAIQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E + + FTLL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L
Sbjct: 515 EAEEG-----SGEQDFTLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLQMEVGLSD 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 570 RVIGQEEAVKAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDTEEA 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
I+RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE+EKA++DVFN
Sbjct: 630 IVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDEVEKAHADVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ + + +K AVM V +
Sbjct: 690 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELAGEANYNEMKSAVMEVVGQH 749
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L R I +I +Q++IL+ +L +++L +S+AAL K+ GF
Sbjct: 750 FRPEFINRIDESVVFHPLGRTQIRAITTLQVDILRQRLQDRDIELVVSEAALDKLGEAGF 809
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 810 DPVYGAR 816
>gi|15677326|ref|NP_274481.1| clpB protein [Neisseria meningitidis MC58]
gi|385852913|ref|YP_005899427.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
gi|416196159|ref|ZP_11618005.1| ATP-dependent chaperone ClpB [Neisseria meningitidis CU385]
gi|427827581|ref|ZP_18994613.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
gi|433465416|ref|ZP_20422896.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM422]
gi|433488751|ref|ZP_20445909.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
M13255]
gi|433490817|ref|ZP_20447936.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM418]
gi|433505322|ref|ZP_20462260.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9506]
gi|54035905|sp|Q9JYQ8.1|CLPB_NEIMB RecName: Full=Chaperone protein ClpB
gi|7226713|gb|AAF41829.1| clpB protein [Neisseria meningitidis MC58]
gi|316984618|gb|EFV63583.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
gi|325140588|gb|EGC63108.1| ATP-dependent chaperone ClpB [Neisseria meningitidis CU385]
gi|325199917|gb|ADY95372.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
gi|432202500|gb|ELK58562.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM422]
gi|432222617|gb|ELK78408.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
M13255]
gi|432226583|gb|ELK82309.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM418]
gi|432240614|gb|ELK96148.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9506]
Length = 859
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|254492204|ref|ZP_05105378.1| ATPase, AAA family [Methylophaga thiooxidans DMS010]
gi|224462529|gb|EEF78804.1| ATPase, AAA family [Methylophaga thiooxydans DMS010]
Length = 861
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/667 (63%), Positives = 552/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+TIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKFTIDLTARAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI++GEVP + K++L+LD+ L+AG K+RGEFE+RLK +L ++S + II
Sbjct: 215 IVEGLAQRIVDGEVPEGMKHKRVLVLDMGSLIAGAKFRGEFEERLKAVLNDLSKQEGSII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K++V EP +E TI ILRGL ++YEVHHGV+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVIVGEPSVESTIGILRGLSERYEVHHGVDITDPAIVAAATLSHRYITDRNLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKIE A+K+E D++SKKRL ++ E+ KL +
Sbjct: 395 DEAASRIRMEIDSKPESLDRLERRLIQLKIERVALKKESDDASKKRLDTLEAEMKKLARE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EK + SQ +KEE+EK R +++ A R +D++ ++KL+YG + +LE+ L
Sbjct: 455 YTDLEEVWKSEKAALHGSQHVKEELEKARQELDAANRSADYEKMAKLQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q +FTLL+ KVG EEIAE+VS+ TGIPVSK+++ ER+KLL ++ L +
Sbjct: 515 MATQAEMQ------EFTLLRNKVGEEEIAEVVSKWTGIPVSKMLEGERDKLLKMDEALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+S+V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ EE+
Sbjct: 569 RVIGQDEAVSSVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSLATFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I+EM + + +K AVM V +
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSNVIQEMAGEENYQQMKQAVMEIVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+DD++VF L ++ I +IA+IQL L+ +L + ++ L+++ AL I+ GF
Sbjct: 749 FRPEFINRVDDVVVFHPLQQEQIRAIADIQLEHLRQRLAERDIKLQVADEALDMIAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|319941466|ref|ZP_08015794.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Sutterella
wadsworthensis 3_1_45B]
gi|319805086|gb|EFW01916.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Sutterella
wadsworthensis 3_1_45B]
Length = 872
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/662 (63%), Positives = 554/662 (83%), Gaps = 3/662 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR GKLDPVIGRDDEIRR +Q+LQRR+KNNPVLIGEPGVGKTA+VEGLA
Sbjct: 161 LKKYTIDLTERARQGKLDPVIGRDDEIRRTMQILQRRTKNNPVLIGEPGVGKTAVVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP++L +K IL LD+A L+AG KYRGEFE+RLKK+L+E++ + II+FIDE+
Sbjct: 221 QRIVNNEVPDTLRNKVILSLDMAGLIAGAKYRGEFEERLKKLLQEVTAQEGKIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EGS+DAGNMLKP L+RGELH IGATTL+EYR+Y+EKDAA ERRFQK+ V+E
Sbjct: 281 HTVVGAGKTEGSMDAGNMLKPALARGELHVIGATTLDEYRKYVEKDAALERRFQKVFVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYE HHGVEITDPAIVAA+ELS+RYI+DR++PDKAIDLIDEAAA+
Sbjct: 341 PSVEDTIAILRGLQEKYEAHHGVEITDPAIVAAAELSHRYITDRYLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+EIDSKPE +DKL+RRLIQLKIE EA+K+E D++SKKRL I+ EI KL +YA+LE+
Sbjct: 401 VKMEIDSKPEALDKLDRRLIQLKIEREAMKKETDDASKKRLAAIEAEIEKLSREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK--EKSQ 371
+WK EK+ + +++EI++VR ++++ R++ ++ +++L+Y L KLE LK EK++
Sbjct: 461 VWKKEKSEALGEKSVRDEIDRVRRQMDEYRRQAQYEKLAELQYAVLPKLEEKLKRAEKAE 520
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
KD + LL+T VG+EEIAE+VSR TGIPVSK+++ ER+KLL++ + L KRV+G
Sbjct: 521 KDTEKTEKGGP-KLLRTSVGAEEIAEVVSRATGIPVSKMMEGERQKLLHMADALEKRVIG 579
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
QDEA+ V+ I RSR+GLSD RPYGSF+FLGPTGVGKTEL K L+ +F+ +E++IRI
Sbjct: 580 QDEAVKRVTETILRSRAGLSDPNRPYGSFLFLGPTGVGKTELTKALAEFLFDTDEAMIRI 639
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ
Sbjct: 640 DMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQ 699
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 611
+LDDGR+TD +GRT++F+N +IVMTSNLGS +I+EM+ ++ IK AVM EV+ +FRPEF
Sbjct: 700 VLDDGRMTDGQGRTVDFKNCVIVMTSNLGSAEIQEMQGEPQDKIKSAVMQEVRAHFRPEF 759
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NRID+I+VF L+ N+ IA IQL L+ ++ + L +++AAL +I+ +GFD +G
Sbjct: 760 VNRIDEIVVFNSLDAANVRKIAEIQLEQLRKRMTAQQIGLDVTEAALDEIAKVGFDPQFG 819
Query: 672 AR 673
AR
Sbjct: 820 AR 821
>gi|385340361|ref|YP_005894233.1| ATP-dependent chaperone ClpB [Neisseria meningitidis G2136]
gi|421566948|ref|ZP_16012689.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3001]
gi|433467617|ref|ZP_20425070.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 87255]
gi|325198605|gb|ADY94061.1| ATP-dependent chaperone ClpB [Neisseria meningitidis G2136]
gi|389605380|emb|CCA44298.1| chaperone protein clpB [Neisseria meningitidis alpha522]
gi|402344891|gb|EJU80024.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3001]
gi|432202038|gb|ELK58106.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 87255]
Length = 859
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EI+ LE +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDGLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|421555123|ref|ZP_16001060.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98008]
gi|402331402|gb|EJU66739.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98008]
Length = 859
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EI+ LE +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDGLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|416177443|ref|ZP_11610041.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M6190]
gi|416192482|ref|ZP_11616664.1| ATP-dependent chaperone ClpB [Neisseria meningitidis ES14902]
gi|433492869|ref|ZP_20449958.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM586]
gi|433502337|ref|ZP_20459307.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM126]
gi|325132627|gb|EGC55316.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M6190]
gi|325138148|gb|EGC60721.1| ATP-dependent chaperone ClpB [Neisseria meningitidis ES14902]
gi|432227164|gb|ELK82875.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM586]
gi|432243011|gb|ELK98526.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM126]
Length = 859
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/668 (64%), Positives = 554/668 (82%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVENTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE--RI 365
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE R
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 366 LKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L
Sbjct: 515 AAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVL 570
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E
Sbjct: 571 HRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSE 630
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DV
Sbjct: 631 DHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDV 690
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 605
FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK
Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKE 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ G
Sbjct: 751 HFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAG 810
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 811 FDPIYGAR 818
>gi|59801418|ref|YP_208130.1| ClpB protein [Neisseria gonorrhoeae FA 1090]
gi|268686347|ref|ZP_06153209.1| ClpB protein [Neisseria gonorrhoeae SK-93-1035]
gi|293399276|ref|ZP_06643441.1| ATP-dependent chaperone ClpB [Neisseria gonorrhoeae F62]
gi|59718313|gb|AAW89718.1| putative ClpB protein [Neisseria gonorrhoeae FA 1090]
gi|268626631|gb|EEZ59031.1| ClpB protein [Neisseria gonorrhoeae SK-93-1035]
gi|291610690|gb|EFF39800.1| ATP-dependent chaperone ClpB [Neisseria gonorrhoeae F62]
Length = 859
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|421560632|ref|ZP_16006488.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2657]
gi|254669474|emb|CBA03362.1| ATP-dependent protease, ATPase subunit [Neisseria meningitidis
alpha153]
gi|402339801|gb|EJU75010.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2657]
Length = 859
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+ EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLLGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|421556851|ref|ZP_16002761.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 80179]
gi|402336105|gb|EJU71367.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 80179]
Length = 859
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 553/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
VVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 SVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|397667476|ref|YP_006509013.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
gi|395130887|emb|CCD09136.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
Length = 858
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/667 (64%), Positives = 551/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLNDLAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ ++K I++LE
Sbjct: 395 DEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDLQKSIDELEQN 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYGRIPELEKRLS 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EKLL +E L
Sbjct: 515 QVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEKLLKMEEALHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 569 RLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + + IK AVM+ V +
Sbjct: 689 ILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIKAAVMDLVSQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ L+++ AL ++ GF
Sbjct: 749 FRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSEALSHLAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|416160735|ref|ZP_11606242.1| ATP-dependent chaperone ClpB [Neisseria meningitidis N1568]
gi|433473860|ref|ZP_20431219.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97021]
gi|433482370|ref|ZP_20439628.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2006087]
gi|433484407|ref|ZP_20441630.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2002038]
gi|433486678|ref|ZP_20443870.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97014]
gi|325128567|gb|EGC51440.1| ATP-dependent chaperone ClpB [Neisseria meningitidis N1568]
gi|432208789|gb|ELK64761.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97021]
gi|432215090|gb|ELK70980.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2006087]
gi|432220101|gb|ELK75927.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2002038]
gi|432221197|gb|ELK77010.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97014]
Length = 859
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/668 (63%), Positives = 554/668 (82%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE--RI 365
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE R
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 366 LKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L
Sbjct: 515 AAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVL 570
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E
Sbjct: 571 HRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSE 630
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEG YLTE VRRKPYS+ILLDE+EKA+ DV
Sbjct: 631 DHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGSYLTEQVRRKPYSVILLDEVEKAHPDV 690
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 605
FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK
Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKE 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ G
Sbjct: 751 HFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAG 810
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 811 FDPIYGAR 818
>gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Lens]
gi|53754469|emb|CAH15953.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Lens]
Length = 858
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/667 (64%), Positives = 551/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLNDLAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ ++K I++LE
Sbjct: 395 DEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDLQKSIDELEQN 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYGRIPELEKRLS 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EKLL +E L
Sbjct: 515 QVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEKLLKMEEALHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 569 RLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + + IK AVM+ V +
Sbjct: 689 ILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIKAAVMDLVSQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ L+++ AL ++ GF
Sbjct: 749 FRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSEALSHLAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|54297663|ref|YP_124032.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Paris]
gi|296107341|ref|YP_003619041.1| ATP-dependent Clp protease [Legionella pneumophila 2300/99 Alcoy]
gi|53751448|emb|CAH12866.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Paris]
gi|295649242|gb|ADG25089.1| ATP-dependent Clp protease [Legionella pneumophila 2300/99 Alcoy]
gi|307610448|emb|CBX00019.1| endopeptidase Clp ATP-binding chain B [Legionella pneumophila 130b]
Length = 858
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/667 (64%), Positives = 551/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLNDLAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAAMLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ ++K I++LE
Sbjct: 395 DEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDLQKSIDELEQN 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYGRIPELEKRLS 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EKLL +E L
Sbjct: 515 QVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEKLLKMEEALHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 569 RLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + + IK AVM+ V +
Sbjct: 689 ILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIKAAVMDLVSQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ L+++ AL ++ GF
Sbjct: 749 FRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSEALSHLAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|194098306|ref|YP_002001364.1| putative ClpB protein [Neisseria gonorrhoeae NCCP11945]
gi|268594573|ref|ZP_06128740.1| chaperone clpB [Neisseria gonorrhoeae 35/02]
gi|385335472|ref|YP_005889419.1| putative ClpB protein [Neisseria gonorrhoeae TCDC-NG08107]
gi|193933596|gb|ACF29420.1| putative ClpB protein [Neisseria gonorrhoeae NCCP11945]
gi|268547962|gb|EEZ43380.1| chaperone clpB [Neisseria gonorrhoeae 35/02]
gi|317164015|gb|ADV07556.1| putative ClpB protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 859
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG++E+AEIVSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|268684092|ref|ZP_06150954.1| ClpB protein [Neisseria gonorrhoeae SK-92-679]
gi|268624376|gb|EEZ56776.1| ClpB protein [Neisseria gonorrhoeae SK-92-679]
Length = 859
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKP+S+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPHSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|292492354|ref|YP_003527793.1| ATP-dependent chaperone ClpB [Nitrosococcus halophilus Nc4]
gi|291580949|gb|ADE15406.1| ATP-dependent chaperone ClpB [Nitrosococcus halophilus Nc4]
Length = 865
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/661 (64%), Positives = 545/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L++YTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LERYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L +++L LD+ L+AG K+RGEFE+RLK +LK+IS + +II+FIDEL
Sbjct: 221 QRIVNSEVPEGLKHRRLLALDMGALIAGAKFRGEFEERLKAVLKDISKAEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DA NMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTVVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL ++YEVHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSLEDTIAILRGLNERYEVHHGVEITDPAIVAAATLSHRYITDRKLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD++ERRL+QLKIE EA+++E DE+SKKRL ++ EIN LE +YA+LE+
Sbjct: 401 IRMEIDSKPEPMDRMERRLVQLKIEREALRKETDEASKKRLETLETEINHLEKEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + +Q IKE++E+ RL+++ A R D +S+L+YG++ +L++ Q D
Sbjct: 461 IWKAEKAALSGAQGIKEKLEQARLELDSARRAGDLTRMSELQYGQIPELQK------QLD 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
F LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L +RVVGQ+
Sbjct: 515 AATAAEQQDFKLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLKMEEALHRRVVGQE 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+A +F+ EE+++RIDM
Sbjct: 575 EAIEVVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALAAFLFDTEEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD GRT++FRNT++VMTSNLGS I+EM + + +K AVM V +FRPEFI
Sbjct: 695 DDGRLTDGHGRTVDFRNTVVVMTSNLGSHVIQEMAGEEHYQEMKNAVMEIVGQHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DD++VF L + I +IA +Q+ L+ +L + +MDL +S+ AL K++ +GFD +YGA
Sbjct: 755 NRVDDVVVFHPLLKGQIRAIAKLQIGHLQQRLRERDMDLAVSETALDKLAEVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|397664204|ref|YP_006505742.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
gi|395127615|emb|CCD05814.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
Length = 858
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/667 (64%), Positives = 550/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLNDLAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ ++K I++LE
Sbjct: 395 DEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDLQKSIDELEQS 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYGRIPELEKRLS 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EKLL +E L
Sbjct: 515 QVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEKLLKMEEALHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 569 RLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + IK AVM+ V +
Sbjct: 689 ILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYNEIKAAVMDLVSQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ L+++ AL ++ GF
Sbjct: 749 FRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSEALSHLAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|268598720|ref|ZP_06132887.1| ClpB protein [Neisseria gonorrhoeae MS11]
gi|268582851|gb|EEZ47527.1| ClpB protein [Neisseria gonorrhoeae MS11]
Length = 859
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPTLARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKP+S+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPHSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|300114805|ref|YP_003761380.1| ATP-dependent chaperone ClpB [Nitrosococcus watsonii C-113]
gi|299540742|gb|ADJ29059.1| ATP-dependent chaperone ClpB [Nitrosococcus watsonii C-113]
Length = 865
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/661 (64%), Positives = 544/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L++YTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LERYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L ++++L LD+ L+AG K+RGEFE+RLK +LK+IS + +II+FIDEL
Sbjct: 221 QRIINSEVPEGLKNRRLLALDMGALIAGAKFRGEFEERLKAVLKDISKAEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DA NMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTVVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEYRRYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P++E+TI+ILRGL ++YEVHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PNVEDTIAILRGLSERYEVHHGVEITDPAIVAAATLSHRYITDRKLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+LERRLIQLKIE EA++RE DE+SK+RL ++ E+N+LE +YA+LE+
Sbjct: 401 IRMEIDSKPEPMDRLERRLIQLKIEREALRRETDEASKRRLETLETELNQLEKEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + +Q IKE++E+ RL + A R D +S+L+YG + +L++ Q D
Sbjct: 461 IWKAEKATLSGAQGIKEQLEQARLDLESAHRAGDLGRMSELQYGRIPELQK------QLD 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ F LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L +RVVGQD
Sbjct: 515 AATAVEQHDFKLLRNKVSEEEIAEVVSKWTGIPVSKMLEGEREKLLKMEAALHQRVVGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI+ VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+++RIDM
Sbjct: 575 EAIAVVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALAMFLFDTEEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD GRT++FRNT++VMTSNLGS I+EM D+ + +K AVM V +FRPEFI
Sbjct: 695 DDGRLTDGHGRTVDFRNTVVVMTSNLGSHVIQEMAGEDRYQEMKSAVMEIVGQHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DD++VF L ++ + +IA IQ+ L+ +L + +M L I + AL K++ GFD +YGA
Sbjct: 755 NRVDDVVVFHPLQKEQLQAIAQIQMGYLRQRLAQRDMVLTIPEDALSKLAEAGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|421538432|ref|ZP_15984608.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93003]
gi|402316459|gb|EJU52004.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93003]
Length = 859
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 553/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLG TGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|422348530|ref|ZP_16429423.1| chaperone ClpB [Sutterella wadsworthensis 2_1_59BFAA]
gi|404659231|gb|EKB32085.1| chaperone ClpB [Sutterella wadsworthensis 2_1_59BFAA]
Length = 864
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/660 (63%), Positives = 551/660 (83%), Gaps = 3/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR +Q+LQRRSKNNPVLIGEPGVGKTA+VEGLA
Sbjct: 161 LKKYTVDLTERARQGKLDPVIGRDDEIRRTMQILQRRSKNNPVLIGEPGVGKTAVVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP+SL K+IL LD+A L+AG KYRGEFE+RLKK+LKE++ II+FIDEL
Sbjct: 221 QRIVNNEVPDSLRGKRILSLDMAGLIAGAKYRGEFEERLKKLLKEVTAESGRIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EGS+DAGNMLKP LSRGELH IGATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 281 HTVVGAGKTEGSMDAGNMLKPALSRGELHVIGATTLDEYRKYVEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ++YE HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVEDTIAILRGLQERYEAHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+EIDSKPE +DKL+RRLIQLKIE EA+K+E D++SKKRL I+ EI+KL +YA+LE+
Sbjct: 401 VKMEIDSKPEALDKLDRRLIQLKIEREAMKKETDDASKKRLQAIEDEIDKLSREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK+ ++ +++EI++ R ++ + R + ++ +++L+Y L KLE LK+ + +
Sbjct: 461 VWKKEKSEALGAKSVRDEIDRTRHQMEEYRRTAQYEKLAELQYAVLPKLEERLKKAEKAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+A K LL+T VG+EEIAE+VSR TGIPV+K+++ ER+KLL++++ L +RVVGQD
Sbjct: 521 ---AGDAPKPKLLRTTVGAEEIAEVVSRATGIPVAKMMEGERQKLLHMKDALEERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+ I RSR+GLSD RPYGSF+FLGPTGVGKTEL K L+ +F+ E++++RIDM
Sbjct: 578 EAVKRVAETILRSRAGLSDPNRPYGSFLFLGPTGVGKTELTKALAQFLFDTEDALVRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRHPYSVILLDEVEKAHPDVFNVLLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS +I+EM +E +K AVM EV+ +FRPEFIN
Sbjct: 698 DDGRMTDGQGRTVDFKNTVIVMTSNLGSSEIQEMIGESRESVKNAVMTEVREHFRPEFIN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I++F L + I IA IQL L+ ++ ++ L+++ A+ +++ +GFD YGAR
Sbjct: 758 RIDEIVIFNSLGSEAIRRIAAIQLKSLQARVAAQDVTLEVTDEAMAELAEVGFDPHYGAR 817
>gi|148359294|ref|YP_001250501.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Corby]
gi|148281067|gb|ABQ55155.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Corby]
Length = 858
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/667 (64%), Positives = 551/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLNDLAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAAMLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ ++K I++LE
Sbjct: 395 DEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDLQKSIDELEQN 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYGRIPELEKRLS 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EKLL +E L
Sbjct: 515 QVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEKLLKMEEALHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 569 RLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHTDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + + IK AVM+ V +
Sbjct: 689 ILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIKAAVMDLVSQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ L+++ AL ++ GF
Sbjct: 749 FRPEFINRIDESVVFHSLAKEQIAKIAAIQINYLHHRLKQQNITLEVTNEALSHLAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|421559550|ref|ZP_16005423.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 92045]
gi|402335349|gb|EJU70615.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 92045]
Length = 859
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 553/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLG TGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|52841977|ref|YP_095776.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|378777611|ref|YP_005186049.1| ClpB protein [Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|52629088|gb|AAU27829.1| ClpB protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364508426|gb|AEW51950.1| ClpB protein [Legionella pneumophila subsp. pneumophila ATCC 43290]
Length = 858
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/667 (64%), Positives = 551/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLNDLAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ ++K I++LE
Sbjct: 395 DEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDLQKSIDELEQN 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYGRIPELEKRLS 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EKLL +E L
Sbjct: 515 QVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEKLLKMEEALHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 569 RLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + + IK AVM+ V +
Sbjct: 689 ILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIKAAVMDLVSQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ ++++ AL ++ GF
Sbjct: 749 FRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITIEVTSEALSHLAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|163857486|ref|YP_001631784.1| ATP-dependent protease, ATPase subunit [Bordetella petrii DSM
12804]
gi|163261214|emb|CAP43516.1| ATP-dependent protease, ATPase subunit [Bordetella petrii]
Length = 886
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/660 (65%), Positives = 551/660 (83%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLT++AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 182 LAKYTLDLTDRARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 241
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE++ + I+FIDEL
Sbjct: 242 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDEL 301
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 302 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVNE 361
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 362 PDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 421
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+++E D++SK+RL +I++E+ KL+ +Y + E+
Sbjct: 422 IRMEIDSKPEVMDKLDRRIIQLKIEREAVRKESDDASKRRLAVIEEELEKLQREYNDYEE 481
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI++VR + + RK + +++L+YG+L +LE LK +
Sbjct: 482 IWKAEKASVQGTQAIKEEIDRVRADMAELQRKGQFDKLAELQYGKLPELEARLKAADTAE 541
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + LL+T+VG+EEIAE+VSR TGIPV+K++Q EREKLL +E+ L KRVVGQD
Sbjct: 542 QQGEKADGQPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEREKLLQMEDHLHKRVVGQD 601
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +IRIDM
Sbjct: 602 EAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDM 661
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 662 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 721
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK V +E+K FRPEF+N
Sbjct: 722 DDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGQPYEVIKEVVWDELKQSFRPEFLN 781
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L ++I SIA IQL L +L + M L++S AAL +++ GFD ++GAR
Sbjct: 782 RIDEVVVFHGLEAQHIESIARIQLKRLAERLERQEMRLEVSDAALAELARAGFDPVFGAR 841
>gi|433537418|ref|ZP_20493913.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 77221]
gi|432271183|gb|ELL26309.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 77221]
Length = 859
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/666 (63%), Positives = 552/666 (82%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLG TGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L ++ LK+ AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQSNIRSIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAKAGFD 812
Query: 668 LIYGAR 673
+YGAR
Sbjct: 813 PVYGAR 818
>gi|77165844|ref|YP_344369.1| ATP-dependent Clp protease [Nitrosococcus oceani ATCC 19707]
gi|254434018|ref|ZP_05047526.1| ATPase, AAA family [Nitrosococcus oceani AFC27]
gi|76884158|gb|ABA58839.1| ATP-dependent Clp protease [Nitrosococcus oceani ATCC 19707]
gi|207090351|gb|EDZ67622.1| ATPase, AAA family [Nitrosococcus oceani AFC27]
Length = 865
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/661 (63%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L++YTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LERYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L ++++L LD+ L+AG K+RGEFE+RLK +LK+IS + +II+FIDEL
Sbjct: 221 QRIINSEVPEGLKNRRLLALDMGALIAGAKFRGEFEERLKAVLKDISKAEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DA NMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTVVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEYRRYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P++E+TI+ILRGL ++YEVHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDLIDE+A++
Sbjct: 341 PNVEDTIAILRGLSERYEVHHGVEITDPAIVAAATLSHRYITDRKLPDKAIDLIDESASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+LERRLIQLKIE EA++RE DE+S++RL ++ E+N+LE +YA+LE+
Sbjct: 401 IRMEIDSKPEPMDRLERRLIQLKIEREALRRETDEASRRRLETLETELNQLEKEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + +Q IKE++E+ RL + A R D +S+L+YG + +L++ Q D
Sbjct: 461 IWKAEKATLSGAQGIKEQLEQARLDLESAHRAGDLGRMSELQYGRIPELQK------QLD 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
F LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L +RVVGQD
Sbjct: 515 AATAVEQQDFKLLRNKVSEEEIAEVVSKWTGIPVSKMLEGEREKLLQMEAALHQRVVGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++ VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+A +F+ EE+++RIDM
Sbjct: 575 EAVAVVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALAAFLFDTEEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD GRT++FRNT++VMTSNLGS I+EM D+ + +K AVM V +FRPEFI
Sbjct: 695 DDGRLTDGHGRTVDFRNTVVVMTSNLGSHVIQEMAGEDRYQEMKSAVMEIVGQHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DD++VF L + + +IA IQ+ L+ +L + M L I + AL K++ GFD +YGA
Sbjct: 755 NRVDDVVVFHPLQKAQLQAIAQIQIGYLQQRLAQREMVLTIPEEALSKLAEAGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|254493514|ref|ZP_05106685.1| ClpB protein [Neisseria gonorrhoeae 1291]
gi|226512554|gb|EEH61899.1| ClpB protein [Neisseria gonorrhoeae 1291]
Length = 859
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/666 (63%), Positives = 553/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPTLARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EI+ L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKP+S+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPHSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD + RT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQDRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|319943320|ref|ZP_08017603.1| chaperone protein ClpB [Lautropia mirabilis ATCC 51599]
gi|319743862|gb|EFV96266.1| chaperone protein ClpB [Lautropia mirabilis ATCC 51599]
Length = 877
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/668 (64%), Positives = 564/668 (84%), Gaps = 8/668 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKYTLDLTERARAGKLDPVIGRDDEIRRTIQILQRRSKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP+SL +K++L LD+A LLAG KYRGEFE+RLK +LK+I+ ++ I+FIDE+
Sbjct: 225 QRIVNGEVPDSLKNKRVLALDMAALLAGAKYRGEFEERLKAVLKDIAADEGRTIVFIDEI 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 285 HTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVGE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 345 PSVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAASR 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE+MD+L+RRLIQLKIE EA+++E D++SKKRL LI++EI ++ +YA+ E+
Sbjct: 405 IKMEIDSKPEVMDRLDRRLIQLKIEREAVRKETDDASKKRLELIEQEIARISKEYADYEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
I K EK ++ S QIK EI+++R ++ + RK ++ +++L+YG+L +LE+ L E + +
Sbjct: 465 ILKAEKAAVQGSAQIKGEIDQLRAQMAELQRKGQYEKLAELQYGKLPELEKRLAEVNAAE 524
Query: 374 IQLPNN----ANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRV 429
L + + K LL+T VG+EEIAE+VSR TGIPVSK+++ EREKLL +E L KRV
Sbjct: 525 TNLKADEAAVSGKPKLLRTVVGAEEIAEVVSRATGIPVSKMMEGEREKLLKMEEELHKRV 584
Query: 430 VGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESII 489
VGQDEA++ VS+AIRRSR+GL+D RP+GSF+FLGPTGVGKTELCK L+ +F++E+ +I
Sbjct: 585 VGQDEAVTLVSDAIRRSRAGLADPNRPWGSFLFLGPTGVGKTELCKALARFMFDSEDHLI 644
Query: 490 RIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNIL 549
RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+ILLDEIEKA+ DVFNIL
Sbjct: 645 RIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRNPYSVILLDEIEKAHPDVFNIL 704
Query: 550 LQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK----GDKEIIKLAVMNEVKI 605
LQ+LDDGRLTD +GRT++FRNT++VMTSN+GS +I+ + D ++IK AVM EV+
Sbjct: 705 LQVLDDGRLTDGQGRTVDFRNTVVVMTSNIGSAEIQRLSADKTLNDPDVIKEAVMGEVRQ 764
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L+ K+I I+ IQL L+ +L + ++ L++S AAL +++ +G
Sbjct: 765 HFRPEFINRIDEVVVFHGLDAKHIRDISVIQLKSLEKRLAERDLKLEVSDAALDELAKVG 824
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 825 FDPLYGAR 832
>gi|385338300|ref|YP_005892173.1| chaperone ClpB (short) [Neisseria meningitidis WUE 2594]
gi|433475890|ref|ZP_20433227.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 88050]
gi|433517864|ref|ZP_20474607.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 96023]
gi|433524413|ref|ZP_20481071.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97020]
gi|319410714|emb|CBY91096.1| chaperone ClpB (short) [Neisseria meningitidis WUE 2594]
gi|432208999|gb|ELK64970.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 88050]
gi|432252608|gb|ELL07960.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 96023]
gi|432258640|gb|ELL13921.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97020]
Length = 859
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/668 (63%), Positives = 553/668 (82%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE--RI 365
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE R
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 366 LKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L
Sbjct: 515 AAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVL 570
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQDE + AVS+AIRRSRSGL+D +PYGSF+FLG TGVGKTELCK L+ +F++E
Sbjct: 571 HRRVVGQDETVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTELCKALAGFLFDSE 630
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DV
Sbjct: 631 DHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDV 690
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 605
FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK
Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKE 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ G
Sbjct: 751 HFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAG 810
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 811 FDPIYGAR 818
>gi|348618449|ref|ZP_08884974.1| Heat-shock protein, ATP-dependent Chaperone protein ClpB
[Candidatus Glomeribacter gigasporarum BEG34]
gi|347816249|emb|CCD29719.1| Heat-shock protein, ATP-dependent Chaperone protein ClpB
[Candidatus Glomeribacter gigasporarum BEG34]
Length = 863
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/661 (65%), Positives = 552/661 (83%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLT +AR KLDPVIGRDDEIRR+IQ+LQRR+KNNPVLIG PGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTGRARADKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGAPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L +I+ ++ I+FIDEL
Sbjct: 221 QRIVNGEVPETLKNKRVLALDMAALLAGAKYRGEFEERLKAVLNDIAKDKGQTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVKE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAA
Sbjct: 341 PSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSQRYITDRFLPDKAIDLIDEAAAC 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MD+LERRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+LE+
Sbjct: 401 IKMEIDSKPEAMDRLERRLIQLKIEREAVKKEKDEASQKRLQLIEEEIQRLDKEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK+ + S Q+KE+I++ R +I + R+ V++L+YG+L +LE LK +Q +
Sbjct: 461 IWTAEKSAAQGSAQLKEDIDRARAEIARLQREGKLDKVAELQYGKLPELEAQLKRVAQAE 520
Query: 374 I-QLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ + LL+T+VG+EEIAE++SR TGIPV++++Q EREKL+ IE L +RVV Q
Sbjct: 521 AGRTAQPEARARLLRTQVGAEEIAEVISRATGIPVARMMQGEREKLMQIEAKLHERVVAQ 580
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEAI AV+NAIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L+A +F +E +IRID
Sbjct: 581 DEAIDAVANAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAAFLFGDETHLIRID 640
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+ILLDEIEKA++++FN+LLQ+
Sbjct: 641 MSEFGEKHSVARLIGAPPGYVGYEEGGYLTETVRRTPYSVILLDEIEKAHAEIFNVLLQV 700
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGR+TD +GRT++F+NT+IVMTSNLG+ I+ M ++ ++ AV NEV+ F+PEF+
Sbjct: 701 LDDGRMTDGQGRTVDFKNTVIVMTSNLGAHLIQSMIGEPRDAMREAVWNEVRQSFKPEFL 760
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L+R NI SIA IQL L +L K++M L IS AAL +I +IG+D +GA
Sbjct: 761 NRIDEVVVFDALDRSNIESIARIQLGRLAERLSKLDMQLDISDAALAQIGSIGYDPSFGA 820
Query: 673 R 673
R
Sbjct: 821 R 821
>gi|303257688|ref|ZP_07343700.1| ATP-dependent chaperone protein ClpB [Burkholderiales bacterium
1_1_47]
gi|331000598|ref|ZP_08324260.1| ATP-dependent chaperone protein ClpB [Parasutterella
excrementihominis YIT 11859]
gi|302859658|gb|EFL82737.1| ATP-dependent chaperone protein ClpB [Burkholderiales bacterium
1_1_47]
gi|329571196|gb|EGG52898.1| ATP-dependent chaperone protein ClpB [Parasutterella
excrementihominis YIT 11859]
Length = 865
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/660 (64%), Positives = 557/660 (84%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTEKA+ GKLDPVIGRDDEIRRA+Q+LQRRSKNNPVLIGEPGVGKTA+VEGLA
Sbjct: 161 LKKYTVDLTEKAKEGKLDPVIGRDDEIRRAMQILQRRSKNNPVLIGEPGVGKTAVVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP++L +K++L LD+A L+AG KYRGEFE+RLK +LKE+ + II+FIDE+
Sbjct: 221 QRIVNGEVPDTLRNKRVLSLDMAGLVAGAKYRGEFEERLKALLKEVVAEEGRIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DAGNMLKP LSRGELH IGATTL+EYR+YIEKD A ERRFQK++V E
Sbjct: 281 HTVVGAGKTEGAMDAGNMLKPALSRGELHVIGATTLDEYRKYIEKDPALERRFQKVIVNE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVEDTIAILRGLQEKYEVHHGVEITDPAIVAAAELSARYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE +DKL+RRLIQLKIE EA+K+E DE+SKKRL +++EI KL +Y++LE+
Sbjct: 401 IKMEIDSKPEELDKLDRRLIQLKIEREAVKKEKDEASKKRLSGLEEEIAKLSREYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK S+++++EI+K++ K+ + R ++ ++ ++YG+L +LE+ L ++ +++
Sbjct: 461 IWKKEKNAALGSKEVRDEIDKLKTKMEELRRSGKYEELAAIQYGKLPELEKQLVKEEKEE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+L + K LL+T+VG+EEIAE+VSR TGIPVSK+++ ER+KLL++ + KRVVGQ
Sbjct: 521 TKLYDEKPK--LLRTQVGAEEIAEVVSRATGIPVSKMMEGERQKLLDMAKYIGKRVVGQK 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V +AI RSR+GLSD RPYGSF+FLGPTGVGKTEL K L+ +F+ E+++IRIDM
Sbjct: 579 EAVDKVVDAILRSRAGLSDPNRPYGSFLFLGPTGVGKTELTKALAEFLFDTEDAMIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQAL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+I+MTSNLGS +I + D E++K AVM+EVK +FRPEFIN
Sbjct: 699 DDGRMTDGQGRTVDFKNTVIIMTSNLGSQEIMNRQGEDPEVVKEAVMDEVKKHFRPEFIN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I+VF L++K I IA IQ+ L ++ + N+ L +++AAL +I +GFD ++GAR
Sbjct: 759 RIDEIVVFNALDQKAIREIARIQIRKLAKRMEQQNIGLDVTEAALDEIGKVGFDPLFGAR 818
>gi|424776135|ref|ZP_18203120.1| ATP-dependent protease, ATPase subunit [Alcaligenes sp. HPC1271]
gi|422888595|gb|EKU30981.1| ATP-dependent protease, ATPase subunit [Alcaligenes sp. HPC1271]
Length = 863
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/699 (63%), Positives = 569/699 (81%), Gaps = 13/699 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT DLTE+ARLGKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LDKYTTDLTERARLGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L+LD+A LLAG KYRGEFE+RLK +LKE+S + I+FIDEL
Sbjct: 221 QRIVNNEVPETLKGKRVLVLDLAALLAGAKYRGEFEERLKAVLKELSKDDGKTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP LSRGELHCIGATTLNEYRQYIEKDAA ERRFQK+LV E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLNEYRQYIEKDAALERRFQKVLVNE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGV ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PDMESTIAILRGLQERYELHHGVAITDPAIVAAAELSQRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+ ++ DE+S++RL I E+ KL+ +Y + E+
Sbjct: 401 IRMEIDSKPEVMDKLDRRIIQLKIEREAVIKDTDEASQRRLQAINDEMEKLQREYNDYEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ SQ +KEEIEKVR ++ + RK + +++L+YG+L +LE LK ++ +
Sbjct: 461 IWKAEKAAVQGSQVVKEEIEKVRAEMAELQRKGQFDKLAELQYGKLPELEERLK-AAEAN 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + +K LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E+ L KRVVGQ
Sbjct: 520 MDKADQ-DKPRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLQMEDYLHKRVVGQG 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTEL K L+ +F++E+ +IRIDM
Sbjct: 579 EAVRLVSDAIRRSRAGLSDPSRPYGSFLFLGPTGVGKTELTKALANFLFDSEDHMIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+I+MTSNLGS I+ + ++IK V EVK +FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQRLSGEPYDVIKEVVWEEVKQHFRPEFLN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L ++I SIA IQL L +L + +M L++S+AAL +++ GFD ++GAR
Sbjct: 759 RIDEVVVFHGLEAEHIESIARIQLERLDQRLAQRDMHLEVSEAALAQLAKAGFDPVFGAR 818
Query: 674 DVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 712
+ K+++ + H ++P A I G GP+ +
Sbjct: 819 PL---KRAI-----QQHIENPVARLILEGRF---GPKDV 846
>gi|114321705|ref|YP_743388.1| ATPase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228099|gb|ABI57898.1| ATPase AAA-2 domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 864
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/661 (63%), Positives = 548/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+A GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 160 LEKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
RIINGEVP L +K+IL LD+A L+AG KYRGEFE+RLK +LK+++ + II+FIDE+
Sbjct: 220 NRIINGEVPEGLKTKRILSLDMAALIAGAKYRGEFEERLKAVLKDLAKQEGQIILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR++IEKDAA ERRFQK+LV+E
Sbjct: 280 HTIVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKHIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YEVHHGVEITDPAIVAA++LS+RYI+DR +PDKAIDL+DEAA++
Sbjct: 340 PSVEDTVAILRGLKERYEVHHGVEITDPAIVAAAQLSHRYITDRQLPDKAIDLVDEAASR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MD+LERRLIQLKIE EA+ +E D++S+KRL ++ EIN+LE +Y LE+
Sbjct: 400 IKMEIDSKPEEMDRLERRLIQLKIEREALAKEEDDASRKRLDALEGEINELEDEYKALEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK ++ +Q IKE++E+ R +++ A R D +S+L+YG + +LER Q D
Sbjct: 460 IWNSEKAAVEGTQSIKEQLERARQELDTARRAGDLGRMSELQYGRIPELER------QLD 513
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ L + LL+T VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E + KRVVGQD
Sbjct: 514 LALQAEMHDTQLLRTSVGTEEIAEVVSRWTGIPVSKMLEGERDKLLRMEEEIRKRVVGQD 573
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE++IR+DM
Sbjct: 574 EAVAAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALASFLFDTEEAMIRVDM 633
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA++DVFN+LLQ+L
Sbjct: 634 SEFMEKHAVARLIGAPPGYVGYEEGGYLTEHVRRKPYSVILLDEVEKAHADVFNVLLQVL 693
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD+ GRT++FRNT+IVMTSNLGSD I++M + + ++ AVM V +FRPEFI
Sbjct: 694 DDGRLTDSHGRTVDFRNTVIVMTSNLGSDVIQQMAGEEHYQEMRSAVMEIVGTHFRPEFI 753
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+++VF L R++I SI +IQL L +L + L++S AA ++ GFD +YGA
Sbjct: 754 NRVDEVVVFHPLGREHIRSITDIQLRQLNARLADKELTLEVSDAAKDQLGEAGFDPVYGA 813
Query: 673 R 673
R
Sbjct: 814 R 814
>gi|393757526|ref|ZP_10346350.1| ATP-dependent protease, ATPase subunit [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165218|gb|EJC65267.1| ATP-dependent protease, ATPase subunit [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 863
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/699 (63%), Positives = 569/699 (81%), Gaps = 13/699 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT DLTE+ARLGKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTTDLTERARLGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L+LD+A LLAG KYRGEFE+RLK +LKE+S + I+FIDEL
Sbjct: 221 QRIVNNEVPETLKGKRVLVLDLAALLAGAKYRGEFEERLKAVLKELSKDDGKTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP LSRGELHCIGATTLNEYRQYIEKDAA ERRFQK+LV E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLNEYRQYIEKDAALERRFQKVLVNE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGV ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PDMESTIAILRGLQERYELHHGVAITDPAIVAAAELSQRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+ ++ DE+S++RL I E+ KL+ +Y + E+
Sbjct: 401 IRMEIDSKPEVMDKLDRRIIQLKIEREAVIKDTDEASQRRLQAINDEMEKLQREYNDYEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK ++ SQ +KEEIEKVR ++ + RK + +++L+YG+L +LE LK ++ +
Sbjct: 461 VWKAEKAAVQGSQVVKEEIEKVRAEMAELQRKGQFDKLAELQYGKLPELEERLK-AAEAN 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + +K LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E+ L KRVVGQ
Sbjct: 520 MDKADQ-DKPRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLQMEDYLHKRVVGQG 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTEL K L+ +F++E+ +IRIDM
Sbjct: 579 EAVRLVSDAIRRSRAGLSDPSRPYGSFLFLGPTGVGKTELTKALANFLFDSEDHMIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+I+MTSNLGS I+ + ++IK V EVK +FRPEF+N
Sbjct: 699 DDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQRLSGEPYDVIKEVVWEEVKQHFRPEFLN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L ++I SIA IQL L +L + +M L++S AAL +++ GFD ++GAR
Sbjct: 759 RIDEVVVFHGLEAEHIESIARIQLERLDQRLAQRDMHLEVSDAALAQLAKAGFDPVFGAR 818
Query: 674 DVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 712
+ K+++ + H ++P A I G GP+ +
Sbjct: 819 PL---KRAI-----QQHIENPVARLILEGRF---GPKDV 846
>gi|433516062|ref|ZP_20472828.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2004090]
gi|433528540|ref|ZP_20485149.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3652]
gi|433530748|ref|ZP_20487332.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3642]
gi|433533013|ref|ZP_20489574.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2007056]
gi|433534808|ref|ZP_20491345.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2001212]
gi|432252388|gb|ELL07744.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2004090]
gi|432265341|gb|ELL20537.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3652]
gi|432265558|gb|ELL20750.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3642]
gi|432265978|gb|ELL21167.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2007056]
gi|432270815|gb|ELL25949.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2001212]
Length = 859
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/666 (63%), Positives = 551/666 (82%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK + ++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDSAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDE + AVS+AIRRSRSGL+D +PYGSF+FLG TGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDETVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>gi|270159567|ref|ZP_06188223.1| chaperone protein ClpB [Legionella longbeachae D-4968]
gi|289165637|ref|YP_003455775.1| endopeptidase Clp ATP-binding subunit B [Legionella longbeachae
NSW150]
gi|269987906|gb|EEZ94161.1| chaperone protein ClpB [Legionella longbeachae D-4968]
gi|288858810|emb|CBJ12724.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
longbeachae NSW150]
Length = 859
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/729 (60%), Positives = 576/729 (79%), Gaps = 27/729 (3%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKFRGEFEERLKAVLNDLAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++EIDSKPE MDKLERRLIQLKIE EA+K+E+DE+SKKRL ++ I++LE
Sbjct: 395 DEAGSLIRMEIDSKPESMDKLERRLIQLKIEREALKKEHDEASKKRLEDLQHTIDELEHN 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE++WK EK ++ + QIKE +E+ +L++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YSDLEEVWKAEKATMQGATQIKEALEQAKLEMETARRAGDLSRMSELQYGRIPELEKRLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + Q + L++ KV +E+AE+VSR TGIPV+K+++ E+EKLL +E +L
Sbjct: 515 QVATTESQ------ETKLVRNKVTEDEVAEVVSRWTGIPVAKMMEGEKEKLLRMEEVLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
R++GQ+EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RLIGQNEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK---EIIKLAVMNEVK 604
ILLQ++DDGRLTD +GRT++FRNTIIVMTSNLGS+ I+EM G+K E IK AVM V+
Sbjct: 689 ILLQVMDDGRLTDGQGRTVDFRNTIIVMTSNLGSNLIQEM--GNKFKYEQIKEAVMEMVR 746
Query: 605 IYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNI 664
+FRPEFINRIDD +VF L ++ I IA IQ++ L+ +L + ++ L++++ AL ++
Sbjct: 747 QHFRPEFINRIDDTVVFHALIKEQIAKIAAIQISYLQKRLKQQDIHLEVTQEALTHLAEA 806
Query: 665 GFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTLRMVYSMRNY 724
GFD +YGAR + K+++ L ++P A I G +S DT+ + Y
Sbjct: 807 GFDPVYGARPL---KRTIQQQL-----ENPLAQAILTGRF-----KSGDTIDVTY---QD 850
Query: 725 AKIVLGNHE 733
A++ HE
Sbjct: 851 AEMRFAGHE 859
>gi|357406325|ref|YP_004918249.1| Chaperone protein ClpB [Methylomicrobium alcaliphilum 20Z]
gi|351718990|emb|CCE24664.1| Chaperone protein ClpB [Methylomicrobium alcaliphilum 20Z]
Length = 859
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/667 (63%), Positives = 546/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTI+LTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALSKYTINLTEQAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + K++L LD+A L+AG K+RGEFE+RLK +L +I+ Q +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKGKQLLSLDMAALIAGAKFRGEFEERLKAVLNDIAKQQGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFVDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP++E+TI+ILRGL++KYEVHHGV+ITDPAIVAA+ LS+RYISDR +PDKAIDL+
Sbjct: 335 KVLVDEPNVEDTIAILRGLKEKYEVHHGVDITDPAIVAAATLSHRYISDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MD+L+RRLIQLKIE EA+K E DE+SKKRL +++ I LE +
Sbjct: 395 DEAASRIRMEIDSKPEAMDRLDRRLIQLKIEREALKNETDEASKKRLESLEEAIENLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ ++IWK EK ++ + IKE +E+ RL++ A+R +D +S+L+YG + L + L
Sbjct: 455 YSEFDEIWKAEKAALQGTTAIKERLEQARLELEVASRANDLSRMSELQYGVIPSLVKELD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E + K
Sbjct: 515 LASQAEMQ------EMKLLRNKVTDEEIAEVVSKWTGIPVSKMMEGERDKLLRMEEQIQK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ +VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVVGQTEALISVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRN ++VMTSNLGSD+I+E+ + +K AVM V +
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNAVVVMTSNLGSDRIQELAGEENYAAMKSAVMEVVGYH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRIDD++VF L R I SI +IQ+ L+ +LL ++DL++S+AAL K+ GF
Sbjct: 749 FRPEFINRIDDVVVFHPLGRDQIRSITDIQIRYLRKRLLDHDIDLELSEAALDKLGEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|33596441|ref|NP_884084.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis
12822]
gi|54035815|sp|Q7W9E6.1|CLPB_BORPA RecName: Full=Chaperone protein ClpB
gi|33566210|emb|CAE37116.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis]
Length = 865
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/661 (65%), Positives = 552/661 (83%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE++ + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I++E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG+L +LE LK +
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAADSAE 519
Query: 374 IQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L KRVVGQ
Sbjct: 520 REAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +IRID
Sbjct: 580 DEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK V +E+K FRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIKEVVWDELKHTFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L K M L +S AAL +I+ GFD ++GA
Sbjct: 760 NRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>gi|407697521|ref|YP_006822309.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
dieselolei B5]
gi|407254859|gb|AFT71966.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
dieselolei B5]
Length = 861
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/667 (62%), Positives = 544/667 (81%), Gaps = 4/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ + LKKYT DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDRMESLKKYTTDLTARAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKEKRVLSLDMAALIAGAKYRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEVHHGVDITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDS PE MD+L+RRLIQLK+E EA+++E DE+S+KRL ++ +I LE +
Sbjct: 395 DEAASRIRMEIDSMPEEMDRLDRRLIQLKMEREALRKEEDEASRKRLEKLEADIAALEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK ++ +QQ K E+E+ R+ + +A R D +S+L+YG + +LE+ ++
Sbjct: 455 YADLEEIWNAEKAALQGAQQYKAELEQARVDMEQARRAGDLNRMSELQYGVIPELEKKVQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ +++ + LL+ KV EE+AE+VS+ TGIPVSK+++ EREKLL +E L
Sbjct: 515 QAQERE---EAAQVETQLLRNKVTDEEVAEVVSKWTGIPVSKMLEGEREKLLRMEEALHH 571
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 572 RVVGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAGFLFDTEEA 631
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 632 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 691
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
+LLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I+ M +GD E +K AVM V +
Sbjct: 692 VLLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRMAGEGDYEAMKAAVMEVVGQH 751
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L + + IA IQL+ L+ +L+ M L +S AAL K+ GF
Sbjct: 752 FRPEFINRVDETVVFHPLGQAQLKGIAGIQLDYLRKRLVDREMSLTLSDAALDKLVEAGF 811
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 812 DPVYGAR 818
>gi|408415770|ref|YP_006626477.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis 18323]
gi|410419648|ref|YP_006900097.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
MO149]
gi|412338419|ref|YP_006967174.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
253]
gi|427821419|ref|ZP_18988482.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
D445]
gi|427823388|ref|ZP_18990450.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
Bbr77]
gi|401777940|emb|CCJ63301.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis 18323]
gi|408446943|emb|CCJ58614.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
MO149]
gi|408768253|emb|CCJ53014.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
253]
gi|410572419|emb|CCN20695.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
D445]
gi|410588653|emb|CCN03713.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
Bbr77]
Length = 865
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/661 (65%), Positives = 552/661 (83%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE++ + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I++E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG+L +LE LK +
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAADSAE 519
Query: 374 IQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L KRVVGQ
Sbjct: 520 REAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +IRID
Sbjct: 580 DEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK V +E+K FRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIKEVVWDELKHTFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L K M L +S AAL +I+ GFD ++GA
Sbjct: 760 NRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>gi|33602268|ref|NP_889828.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
RB50]
gi|427814108|ref|ZP_18981172.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
1289]
gi|54035816|sp|Q7WHB6.1|CLPB_BORBR RecName: Full=Chaperone protein ClpB
gi|33576707|emb|CAE33785.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
RB50]
gi|410565108|emb|CCN22660.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
1289]
Length = 865
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/661 (65%), Positives = 552/661 (83%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE++ + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I++E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG+L +LE LK +
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAADSAE 519
Query: 374 IQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L KRVVGQ
Sbjct: 520 REAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +IRID
Sbjct: 580 DEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK V +E+K FRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIKEVVWDELKHTFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L K M L +S AAL +I+ GFD ++GA
Sbjct: 760 NRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>gi|288941086|ref|YP_003443326.1| ATP-dependent chaperone ClpB [Allochromatium vinosum DSM 180]
gi|288896458|gb|ADC62294.1| ATP-dependent chaperone ClpB [Allochromatium vinosum DSM 180]
Length = 865
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/668 (63%), Positives = 552/668 (82%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+A L+AG+K+RGEFE+RLK +L +I+ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKSKRLLALDMAALIAGSKFRGEFEERLKAVLNDIARQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP++E+TI+ILRGL+++YEVHH VEITD AIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPNVEDTIAILRGLKERYEVHHAVEITDTAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDS PE MD+L+RRLIQLKIE EA+K+E DE+S+KRL ++ +I +LE +
Sbjct: 395 DEAASRIRMEIDSMPEEMDRLDRRLIQLKIEREALKKESDEASRKRLADLEGQIARLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+A+L++IWK EK ++ + IKE +++VRL++ A R DW +S+L+YG + +LE+ L
Sbjct: 455 FADLDEIWKSEKAAVQGTAHIKEALDRVRLEMETARRAGDWTRMSELQYGRVPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ + N+ LL+ KV EE+AE+VS+ TGIP+SK+++ ER+KLL +E+ + +
Sbjct: 515 AASQAE----QGENR--LLRNKVTDEEVAEVVSKWTGIPISKMLEGERDKLLRMESEIEQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+A +F+ EE+
Sbjct: 569 RVVGQNEAVRAVSDAIRRSRAGLSDPGRPIGSFLFLGPTGVGKTELCKALAAFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSLILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKI 605
+LLQ+LDDGRLTD +GRT++FRN++IVMTSNLGSD I++ G+ +K AVM V+
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNSVIVMTSNLGSDIIQQ-RAGEAHYAEMKEAVMESVRH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINR+D+I+VF L + I +IA IQL L+ +L + +M L++S AAL + G
Sbjct: 748 AFRPEFINRLDEIVVFHPLQQAQIRAIARIQLGYLQQRLAERDMKLEVSDAALDHLGAAG 807
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 808 FDPVYGAR 815
>gi|254449004|ref|ZP_05062458.1| ATP-dependent chaperone ClpB [gamma proteobacterium HTCC5015]
gi|198261398|gb|EDY85689.1| ATP-dependent chaperone ClpB [gamma proteobacterium HTCC5015]
Length = 854
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/669 (62%), Positives = 551/669 (82%), Gaps = 11/669 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A GK+DPVIGRDDE+RRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EENRQALEKYTIDLTERAEQGKIDPVIGRDDEVRRAIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L +++ + II
Sbjct: 213 IVEGLAQRIVNGEVPEGIKNKRLLSLDLGALIAGAKYRGEFEERLKALLNDLAKQEGQII 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+T++ILRGL+++YEVHHGV++TDPAIV+A+ LS RYI+DR +PDKAIDLI
Sbjct: 333 KVLVDEPSVEDTVAILRGLKERYEVHHGVDVTDPAIVSAATLSQRYITDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL ++ +I LE +
Sbjct: 393 DEAASRIRMEIDSKPESMDKLERRLIQLKIEREALKKESDEASKKRLNDLETQIRSLEKE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L+++W+ EK+ ++ + +KE +++ R+++ A R D +S+L+YG + +LE+ L
Sbjct: 453 YADLDEVWRSEKSAVQGNTNVKEALDRARVELETARRAGDLSRMSELQYGTIPELEQQLD 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D +FTLL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E L +
Sbjct: 513 QAESDD------EREFTLLRNKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRMEAALHQ 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+A+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+A +F+ E++
Sbjct: 567 RVVGQDEAVRAVSDAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELTKALAAFLFDTEDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 627 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI---IKLAVMNEVK 604
ILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS +I+ + GD +K AVM EV
Sbjct: 687 ILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSSEIQML--GDVSTYDDMKAAVMEEVG 744
Query: 605 IYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNI 664
+FRPEFINRID+ +VF L++ I +IA +QL L+ ++ + ++ L+IS+AAL K+
Sbjct: 745 KHFRPEFINRIDEAVVFHSLDQTQIRAIAEVQLQSLRRRMQERDLSLEISEAALDKLGEA 804
Query: 665 GFDLIYGAR 673
GFD +YGAR
Sbjct: 805 GFDPVYGAR 813
>gi|33592328|ref|NP_879972.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis Tohama
I]
gi|384203631|ref|YP_005589370.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis CS]
gi|54035814|sp|Q7VYV6.1|CLPB_BORPE RecName: Full=Chaperone protein ClpB
gi|33571973|emb|CAE41494.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis Tohama
I]
gi|332381745|gb|AEE66592.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis CS]
Length = 865
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/661 (65%), Positives = 551/661 (83%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE++ + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMAGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I++E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG+L +LE LK +
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAADSAE 519
Query: 374 IQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L KRVVGQ
Sbjct: 520 REAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +IRID
Sbjct: 580 DEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK V +E+K FRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIKEVVWDELKHTFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L K M L +S AAL +I+ GFD ++GA
Sbjct: 760 NRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>gi|410473590|ref|YP_006896871.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis
Bpp5]
gi|408443700|emb|CCJ50378.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis
Bpp5]
Length = 865
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/661 (65%), Positives = 551/661 (83%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE++ + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I++E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG+L +LE LK +
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAADSAE 519
Query: 374 IQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ +++ K LL+T+VG EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L KRVVGQ
Sbjct: 520 REAGESDSGKPRLLRTQVGVEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +IRID
Sbjct: 580 DEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK V +E+K FRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIKEVVWDELKHTFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L K M L +S AAL +I+ GFD ++GA
Sbjct: 760 NRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>gi|344344157|ref|ZP_08775021.1| ATP-dependent chaperone ClpB [Marichromatium purpuratum 984]
gi|343804114|gb|EGV22016.1| ATP-dependent chaperone ClpB [Marichromatium purpuratum 984]
Length = 864
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/703 (60%), Positives = 559/703 (79%), Gaps = 11/703 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EEQRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L S+++L LD+A L+AG K+RGEFE+RLK +L +I+ + ++I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKSRRLLSLDMAALIAGAKFRGEFEERLKAVLNDIARQEGNVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQ
Sbjct: 273 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP++E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+RYISDR +PDKAIDL+
Sbjct: 333 KVLVDEPNVEDTIAILRGLKERYEVHHAVEITDPAIVAAATLSHRYISDRQLPDKAIDLV 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDS PE MD+L+RRLIQLKIE EA+K+E DE+S+KRL ++ E+ +LE +
Sbjct: 393 DEAASHIRMEIDSMPEEMDRLDRRLIQLKIEREALKKESDEASRKRLADLEDEVGRLERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+A+L+++WK EK + + IKE +++ R+++ A R D +S+L+YG + +LE+ L
Sbjct: 453 FADLDEVWKSEKAAVAGTAHIKEALDRARVEMETARRAGDLGRMSELQYGRIPELEKQLA 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ Q N LL+ KVG EEIAEIVSR TGIPVS++++ ER+KLL +E + +
Sbjct: 513 SAAAGTEQGDNR-----LLRNKVGDEEIAEIVSRWTGIPVSRMLEGERDKLLRMEQEIGR 567
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F+ EE+
Sbjct: 568 RVVGQDEAVGAVSDAIRRSRAGLSDPARPIGSFLFLGPTGVGKTELCKTLASFLFDTEEA 627
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRR+PYSLILLDE+EKA+ DVFN
Sbjct: 628 MVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRRPYSLILLDEVEKAHPDVFN 687
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKI 605
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I++ G+ +K AVM V+
Sbjct: 688 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSEVIQQ-HAGEAAYAEMKTAVMAVVRQ 746
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINR+D+I+VF L + I +IA IQL+ L+ +L M L++ AAL + G
Sbjct: 747 AFRPEFINRLDEIVVFHPLQQTQIRAIARIQLDYLQRRLADREMRLEVGDAALDLLGEAG 806
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 708
FD +YGAR + K+++ L+ + A GDLI G
Sbjct: 807 FDPVYGARPL---KRAIRAQLENPLAQEILAGKFAPGDLIEVG 846
>gi|344941214|ref|ZP_08780502.1| ATP-dependent chaperone ClpB [Methylobacter tundripaludum SV96]
gi|344262406|gb|EGW22677.1| ATP-dependent chaperone ClpB [Methylobacter tundripaludum SV96]
Length = 858
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/700 (61%), Positives = 557/700 (79%), Gaps = 17/700 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE LKKYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALKKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + K++L LD+A L+AG K+RGEFE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKGKRVLALDMAALIAGAKFRGEFEERLKAVLNDLAKQEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KYEVHHGV+ITDPAI+AA+ LSYRYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKEKYEVHHGVDITDPAIIAAANLSYRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MDKL RRLIQLKIE A+K+E D +SKKRL ++++EI LE +
Sbjct: 395 DEAASRIRMEIDSKPEEMDKLYRRLIQLKIEQVALKKEKDAASKKRLEILEEEIADLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S IKE++E+ + ++ A+R D +S+L+YG + LE+ L
Sbjct: 455 YSDLEEIWKAEKASLQGSASIKEKLEQAKTELEAASRAGDLAKMSELQYGIIPALEKQLH 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+P A K TLL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E L K
Sbjct: 515 S------DVPAEAQKMTLLRNKVTEEEIAEVVSKWTGIPVSKMMEGERDKLLRMEEQLGK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ ++
Sbjct: 569 RVIGQEEALKAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFMFDTPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNTIIVMTSNLGSD I+ + G+ ++K AVM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTIIVMTSNLGSDVIQSL-SGEALYSVMKNAVMDIVST 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+ +VF L R I +I+ IQ++ L+ +L + +IS+ AL + G
Sbjct: 748 KFRPEFINRIDEAVVFHSLGRGQIRAISGIQIDYLRKRLQDREIGFEISEEALDLLGEAG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
FD +YGAR + K+++ L ++P A I GD +
Sbjct: 808 FDPVYGARPM---KRAIQQQL-----ENPLAQKILAGDFV 839
>gi|293606291|ref|ZP_06688652.1| chaperone protein ClpB [Achromobacter piechaudii ATCC 43553]
gi|292815286|gb|EFF74406.1| chaperone protein ClpB [Achromobacter piechaudii ATCC 43553]
Length = 868
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/664 (64%), Positives = 548/664 (82%), Gaps = 4/664 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE+ + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELGQDDGSNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I+ E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLGVIEDELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG+L LE LK
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYGKLPDLESRLKAAEVGA 519
Query: 374 IQLPNNA----NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRV 429
Q NA + LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL++E L KRV
Sbjct: 520 QQAAENAEGDNGRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQGEREKLLHMEEFLHKRV 579
Query: 430 VGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESII 489
VGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +I
Sbjct: 580 VGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALAEFMFDSEEHLI 639
Query: 490 RIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNIL 549
RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDEIEKA+ DVFN+L
Sbjct: 640 RIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEIEKAHPDVFNVL 699
Query: 550 LQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRP 609
LQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +++K V E++ RP
Sbjct: 700 LQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLAGQPYDVVKEVVWGELRQTLRP 759
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EF+NRID+++VF L ++I SIA IQL L +L K M L++++AAL +++ GFD +
Sbjct: 760 EFLNRIDEVVVFHGLEAQHIESIARIQLRRLGARLEKQEMRLEVTEAALAELARSGFDPV 819
Query: 670 YGAR 673
+GAR
Sbjct: 820 FGAR 823
>gi|345863973|ref|ZP_08816179.1| chaperone protein ClpB [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345124880|gb|EGW54754.1| chaperone protein ClpB [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 862
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/667 (62%), Positives = 546/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKSKRLLSLDMGALIAGAKFRGEFEERLKGVLNDLAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YEVHHGV+ITDPAIVAA+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYEVHHGVDITDPAIVAAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDS PE MD+LERRLIQLKIE EA+ +E DE+SKKRL ++ EI +LE +
Sbjct: 395 DEAASQIRMEIDSMPEEMDRLERRLIQLKIEREAMNKETDEASKKRLAHLESEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE+IWK EK ++ + IKE +E+ RL+++ A R D +S+L+YG + +LE+ L
Sbjct: 455 FSDLEEIWKSEKAALQGTTHIKESLERARLEMDTARRAGDLARMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + LL+ KV EEIA +VS+ TGIPVSK+++ ER+KLL +E + +
Sbjct: 515 MAAQAEMQ------QMKLLRNKVTDEEIAGVVSKWTGIPVSKMLEGERDKLLRMEQEIGR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ E I AVS+AIRRSR+GL+D +P GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQQEGIKAVSDAIRRSRAGLADPSQPNGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+IL+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I+E ++ ++K AVM V+
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSELIQEKSTEEQYGVMKEAVMEVVRSA 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+I+VF L R+ I +IA IQ++ L+ +L M L+IS AAL ++ GF
Sbjct: 749 FRPEFINRLDEIVVFHPLAREQIRAIATIQIDYLRRRLADHEMGLQISDAALDRLGEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|104783632|ref|YP_610130.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
gi|95112619|emb|CAK17347.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
Length = 854
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/666 (63%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI++LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIDRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWASEKAEVQGSAQIQQKIEQARQELEAARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E+LL +
Sbjct: 515 MVDQ------HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMESLLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-AGDREAQRAAVMDAVGSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+ +L + + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRGRLAERELSLSLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|386826620|ref|ZP_10113727.1| ATP-dependent chaperone ClpB [Beggiatoa alba B18LD]
gi|386427504|gb|EIJ41332.1| ATP-dependent chaperone ClpB [Beggiatoa alba B18LD]
Length = 863
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/667 (63%), Positives = 541/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEKRQALEKYTIDLTQRAIQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKGKRVLSLDMGALIAGAKFRGEFEERLKAVLNDLAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP++E+TI+ILRGL+++YEVHHGV+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPNVEDTIAILRGLKERYEVHHGVDITDPAIVAAATLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MDKL+RRLIQLKIE EA+K+E D++SKKRL + ++I + E +
Sbjct: 395 DEAASRIRMEIDSKPERMDKLDRRLIQLKIEREAMKKESDDASKKRLEKLNEDIQRAERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A+L ++W EK ++ SQ IKEE+E+ +L + A R D +S+L+YG + +LE+ L
Sbjct: 455 LADLNEVWNSEKAAVQGSQHIKEELEQAKLALETARRAGDLTRMSELQYGRIPELEKRLS 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + Q + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E L +
Sbjct: 515 AAGKAETQ------EMQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEEALHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVVGQSEAVKLVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALAGFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ +VFN
Sbjct: 629 MIRIDMSEFMEKHTVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPEVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+EM D +K AVM V
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQVIQEMAGEDNYNAMKAAVMEIVSQQ 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRIDD++VF L + I SIA IQ+ +L+ +L M+++L IS AAL + +GF
Sbjct: 749 FRPEFINRIDDVVVFHPLGKAQIRSIAGIQIGLLRKRLGAMSIELSISDAALDLLGEVGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|421484387|ref|ZP_15931956.1| chaperone protein ClpB [Achromobacter piechaudii HLE]
gi|400197306|gb|EJO30273.1| chaperone protein ClpB [Achromobacter piechaudii HLE]
Length = 868
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/664 (64%), Positives = 549/664 (82%), Gaps = 4/664 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP SL K++L LD+A LLAG K+RGEFE+RLK +LKE+ + I+FIDEL
Sbjct: 220 QRIVNDEVPESLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELGQDDGSNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I+ E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLGVIEDELEKLQREYNDFEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG+L LE LK
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYGKLPDLESRLKAAEVGA 519
Query: 374 IQLPNNA----NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRV 429
Q NA ++ LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL++E L KRV
Sbjct: 520 AQAAENAEGDESRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQGEREKLLHMEEFLHKRV 579
Query: 430 VGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESII 489
VGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +I
Sbjct: 580 VGQDEAVRLVSDAIRRSRAGLADPARPYGSFLFLGPTGVGKTELTRALAEFMFDSEEHLI 639
Query: 490 RIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNIL 549
RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+L
Sbjct: 640 RIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVL 699
Query: 550 LQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRP 609
LQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +++K V E+K RP
Sbjct: 700 LQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLAGQPYDVVKEVVWGELKQTLRP 759
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EF+NRID+++VF L ++I SIA IQL L +L K M L+++++AL +++ GFD +
Sbjct: 760 EFLNRIDEVVVFHGLEAQHIESIARIQLRRLGARLEKQEMRLEVTESALAELARSGFDPV 819
Query: 670 YGAR 673
+GAR
Sbjct: 820 FGAR 823
>gi|345870658|ref|ZP_08822609.1| ATP-dependent chaperone ClpB [Thiorhodococcus drewsii AZ1]
gi|343921471|gb|EGV32187.1| ATP-dependent chaperone ClpB [Thiorhodococcus drewsii AZ1]
Length = 865
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/702 (60%), Positives = 564/702 (80%), Gaps = 10/702 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQSLEKYTIDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+A L+AG K+RGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERLKAVLNDVARQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP++E+T++ILRGL+++YEVHH VEITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPNVEDTVAILRGLKERYEVHHAVEITDPAIVAAAVLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDS PE MD+L+RRLIQLKIE EA+K+E DE+SKKRL ++ +I +LE +
Sbjct: 395 DEAASQIRMEIDSMPEEMDRLDRRLIQLKIEREAVKKETDEASKKRLTDLQGQIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L++IWK EK + + IKE +++VRL++ A R DW +S+L+YG + +LE+ L
Sbjct: 455 FSDLDEIWKSEKAASQGNAHIKEALDRVRLEMETARRAGDWARMSELQYGRIPELEKQL- 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D++ N LL++KV EEIA+IVS+ TGIPVS++++ EREKLL +E + +
Sbjct: 514 -ATSADVEKGEN----RLLRSKVTEEEIADIVSKWTGIPVSRMLEGEREKLLRMEQAIEQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L++ +F+ EE+
Sbjct: 569 RVVGQNEAVRAVSDAIRRSRAGLSDPARPIGSFLFLGPTGVGKTELCKSLASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSLILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-IKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRN +IVMTSNLGSD I++M D +K AVM V
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSDVIQQMAGEDNYAEMKDAVMEVVSHA 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+I+VF L R I +IA IQ++ L+ +L + +M L ++ AAL + GF
Sbjct: 749 FRPEFINRLDEIVVFHPLQRAQIRAIARIQIDYLQKRLAERDMKLAVNDAALDHLGEAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 708
D +YGAR + K+++ L+ + + GDLI G
Sbjct: 809 DPVYGARPL---KRAIRAQLENPLAQEILSGKFAPGDLIEVG 847
>gi|422631434|ref|ZP_16696620.1| AAA ATPase, central region [Pseudomonas syringae pv. pisi str.
1704B]
gi|330941203|gb|EGH44077.1| AAA ATPase, central region [Pseudomonas syringae pv. pisi str.
1704B]
Length = 854
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAATKRLEKLQGEIERLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|388456237|ref|ZP_10138532.1| endopeptidase Clp ATP-binding subunit B [Fluoribacter dumoffii
Tex-KL]
Length = 858
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/669 (63%), Positives = 554/669 (82%), Gaps = 11/669 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLT +A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTLDLTARAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRLLSLDMGALIAGAKYRGEFEERLKAVLNDLAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++EIDSKPE MDKLERRLIQLKIE EA+K+E+DE+SKKRL ++ I +LE
Sbjct: 395 DEAGSLIRMEIDSKPESMDKLERRLIQLKIEREALKKEHDEASKKRLEDLEHTIEELEHN 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE++WK EK ++ + QIKE +E+ +L++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YSDLEEVWKAEKATMQGATQIKESLEQAKLEMETARRAGDLSRMSELQYGRIPELEKRLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + ++ ++ NK L++ KV +E+AE+VS+ TGIPV+K+++ E+EKLL +E +L
Sbjct: 515 QVA----EVESHENK--LVRNKVTEDEVAEVVSKWTGIPVAKMMEGEKEKLLRMEEVLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
R++GQ+EAI AVSN+IRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 569 RLIGQNEAIDAVSNSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK---EIIKLAVMNEVK 604
ILLQ++DDGRLTD +GRT++FRNTIIVMTSNLGS+ I+EM G+K E IK AVM V+
Sbjct: 689 ILLQVMDDGRLTDGQGRTVDFRNTIIVMTSNLGSNLIQEM--GNKFKYEQIKDAVMEMVR 746
Query: 605 IYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNI 664
+FRPEFINRIDD +VF L + I IA IQ++ L+ +L + ++ L+++K AL +++
Sbjct: 747 QHFRPEFINRIDDTVVFHSLEKDQIAKIAAIQISYLQKRLKQQDIHLEVTKEALTHLADA 806
Query: 665 GFDLIYGAR 673
GFD +YGAR
Sbjct: 807 GFDPVYGAR 815
>gi|254517175|ref|ZP_05129233.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR5-3]
gi|219674680|gb|EED31048.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR5-3]
Length = 862
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/668 (63%), Positives = 548/668 (82%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+AR GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EESRQALEKYTIDLTERARDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQR+INGEVP L K+IL LD+ LLAGTK+RGEFE+RLK +L E+S + +I
Sbjct: 213 IVEGLAQRVINGEVPEGLRDKRILSLDLGALLAGTKFRGEFEERLKALLNELSKEEGRVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQY+EKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRQYVEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 333 KVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAAAQLSQRYITDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKIE EA++++ DES+ K+L L+ +I +E +
Sbjct: 393 DEAASRIRMEIDSKPEALDRLERRLIQLKIEREAVRKDEDESAVKQLALLDGQIESIEQE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+A+LE+IWK EK ++ + IK +IE+++L + A R D +S+L+YG+L +LE+ L
Sbjct: 453 FADLEEIWKAEKASLQGAASIKSDIEQLKLDLETARRAGDLTRMSELQYGKLPELEKQLA 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + N + TLL+ KV EE+AE+VSR+TGIP+SK+++ +R+KLL +E+ L
Sbjct: 513 QAHAAE-----NVER-TLLRNKVTDEEVAEVVSRSTGIPISKMLEGDRDKLLRMEDALHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++E++
Sbjct: 567 RVVGQNEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALANFLFDSEQA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDEIEKA+ DVFN
Sbjct: 627 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDEIEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E+ GD+ E +K AVM V
Sbjct: 687 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEL-AGDENYEAMKSAVMGVVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEF+NRID+ +VF L ++ I IA IQL L+ +L +M L+IS A + ++ G
Sbjct: 746 HFRPEFVNRIDETVVFHPLLQEQIRGIATIQLAGLRARLAGRDMQLEISDAFMDQLVEGG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|429462532|ref|YP_007183995.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811322|ref|YP_007447777.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338046|gb|AFZ82469.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776480|gb|AGF47479.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 860
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/667 (63%), Positives = 553/667 (82%), Gaps = 1/667 (0%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DE + L KYT D+T +A GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKT
Sbjct: 153 DESNRKSLSKYTTDITSRASNGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKT 212
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLAQRI+NGEVP++L KK+L LDIA L+AG KYRGEFE+RLK +LKE+S + +
Sbjct: 213 AIVEGLAQRIVNGEVPDNLKGKKVLSLDIASLIAGAKYRGEFEERLKSVLKELSIDGNNS 272
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
I+FIDELHT++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRF
Sbjct: 273 ILFIDELHTIMGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRF 332
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QK+LVEEPD+E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS RYI+DRF+PDKAIDL
Sbjct: 333 QKVLVEEPDVESTIAILRGLQERYEIHHGIEITDPAIVAAAELSNRYITDRFLPDKAIDL 392
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEA A+I++EIDSKPEIMD+L+R++IQLKIE EA+KRE D++S+KR +LI++E++KL+
Sbjct: 393 IDEAGARIRMEIDSKPEIMDRLDRKIIQLKIEKEAVKREKDDASRKRFVLIEEELSKLQK 452
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+Y + + IWK EK +++ +Q IKEEI+ ++++++ R + +++++Y L +LE L
Sbjct: 453 EYHDYDDIWKSEKAIVQGTQAIKEEIDNAKIRMSELQRTGQYDKLAEIQYSILPELESRL 512
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
K K I + +KF LL+T+VGSEEIAE+VSR+TGIPVSK++Q E++KLLN+ N L
Sbjct: 513 KFAEGK-INNDSKQHKFKLLRTQVGSEEIAEVVSRSTGIPVSKMMQGEKDKLLNLSNFLS 571
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
RV+GQ+EA+ AVS+AI RSR+GLSD+ RPYGSF+FLG TGVGKTEL + L+ +F+ +
Sbjct: 572 SRVIGQEEAVQAVSDAIIRSRAGLSDSSRPYGSFLFLGSTGVGKTELARALTEFLFDATD 631
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVF
Sbjct: 632 HMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVF 691
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
NILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGS +I ME + IK V+ ++
Sbjct: 692 NILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSSEINSMEDKPYDKIKEIVLGTIRQV 751
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
RPEF+NRID+I+VF L ++++ SI IQL+ L +++ + +M + ++ AA+ +SNIGF
Sbjct: 752 LRPEFLNRIDEIVVFHNLEQRHMESIVRIQLDRLNHRIQQKDMSIDVTNAAISALSNIGF 811
Query: 667 DLIYGAR 673
D +GAR
Sbjct: 812 DSNFGAR 818
>gi|440745962|ref|ZP_20925249.1| ATPase AAA [Pseudomonas syringae BRIP39023]
gi|440371783|gb|ELQ08615.1| ATPase AAA [Pseudomonas syringae BRIP39023]
Length = 854
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQGEIQRLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGYIGYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYIGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|402698425|ref|ZP_10846404.1| ATP-dependent chaperone protein ClpB [Pseudomonas fragi A22]
Length = 855
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/666 (63%), Positives = 550/666 (82%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTIDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LDI L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDIGALIAGAKFRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELH M+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHVMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEEDEAAKKRLEKLQEEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A R + +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQARQELEVARRSGNLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVDEHSSKTENQ-----LLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHE 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 570 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 630 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 690 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVSTHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I IA IQL+ L+++L + ++ L++ K AL+K+ +G+D
Sbjct: 749 RPEFVNRIDEVVIFEPLARDQIAGIAEIQLSRLRSRLAERDLSLELDKDALEKLIAVGYD 808
Query: 668 LIYGAR 673
+YGAR
Sbjct: 809 PVYGAR 814
>gi|333982395|ref|YP_004511605.1| ATP-dependent chaperone ClpB [Methylomonas methanica MC09]
gi|333806436|gb|AEF99105.1| ATP-dependent chaperone ClpB [Methylomonas methanica MC09]
Length = 857
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/667 (63%), Positives = 550/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTI+LTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTINLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP + K++L LD+A L+AG K+RGEFE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIINGEVPEGIKGKQLLSLDMAALIAGAKFRGEFEERLKAVLNDLAKMEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP++E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPNVEDTIAILRGLKERYEIHHSVDITDPAIVAAAMLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKPE MDKL+RRLIQLKIE EA+K E D +SKKRL +++++I +LE +
Sbjct: 395 DEAASRIRMEMDSKPEAMDKLDRRLIQLKIEREAMKNESDAASKKRLEILQEDIAELEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++L++IWK EK ++ + IKE +E RL++ A R D+ +S+L+YGE+ KLE+ L
Sbjct: 455 YSDLDEIWKAEKAALQGTATIKERLEHARLELEAARRSQDYTRMSELQYGEIPKLEKELD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E L K
Sbjct: 515 LASQAEMQ------DTTLLRSKVTEEEIAEVVSKWTGIPVSKMMEGERDKLLRMEEELGK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQTEALKAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFMFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS I+E+ + +K AVM+ V +
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSSVIQELSGEENYNTMKDAVMDIVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L + I +I IQ+ +L +L + +M+L++S++AL + GF
Sbjct: 749 FRPEFINRVDEAVVFHPLGQGQIRAICKIQIELLLRRLQEKDMNLEVSESALDLLGEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|378822292|ref|ZP_09845094.1| ATP-dependent chaperone protein ClpB [Sutterella parvirubra YIT
11816]
gi|378598886|gb|EHY31972.1| ATP-dependent chaperone protein ClpB [Sutterella parvirubra YIT
11816]
Length = 867
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/660 (63%), Positives = 546/660 (82%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR GKLDPVIGRDDEIRR +Q+LQRRSKNNPVLIGEPGVGKTA+VEGLA
Sbjct: 161 LKKYTIDLTERARQGKLDPVIGRDDEIRRTMQILQRRSKNNPVLIGEPGVGKTAVVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP++L KK+L LD+A L+AG KYRGEFE+RLKK+L+E+ + II+FIDEL
Sbjct: 221 QRIVNDEVPDTLKGKKVLSLDMAGLIAGAKYRGEFEERLKKLLEEVVAQEGRIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EGS+DAGNMLKP L+RGELH IGATTL+EYR+Y+EKDAA ERRFQK+L++E
Sbjct: 281 HTVVGAGKTEGSMDAGNMLKPALARGELHVIGATTLDEYRKYVEKDAALERRFQKVLIDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYE HHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PTVEDTIAILRGLQEKYEAHHGVEITDPAIVAAAELSNRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+EIDSKPE +DKL+RRLIQLKIE EA+++E D++SKKRL I++EI KL +YA+LE+
Sbjct: 401 VKMEIDSKPEALDKLDRRLIQLKIEREAMRKETDDASKKRLEAIEEEIEKLSREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK+ ++ +++EIE VR ++ + R++ ++ +++L+Y L KLE L+ ++
Sbjct: 461 IWKKEKSEALGAKSVRDEIENVRREMEECRRQAKYERLAELQYAVLPKLEEKLRHAEDEE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + LL+T VG+EEIAE VSR TGIPV+K+++ ER KLL++ L RVVGQD
Sbjct: 521 KQEKKSGGP-KLLRTSVGAEEIAEAVSRATGIPVAKMMEGERAKLLHMGEALESRVVGQD 579
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+ I RSR+GLSD RPYGSF+FLGPTGVGKTEL K L+ +F+++++++RIDM
Sbjct: 580 EAVKRVTETIMRSRAGLSDPNRPYGSFLFLGPTGVGKTELTKALANFLFDSDDAMVRIDM 639
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 640 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 699
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLG+ +I++M E +K AVM EV+ +FRPEF+N
Sbjct: 700 DDGRMTDGQGRTVDFKNTVIVMTSNLGAAEIQDMIGESHERVKAAVMAEVREHFRPEFVN 759
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I+VF L + +I IA +QL++L ++ ++ L++ AAL +I+ GFD +GAR
Sbjct: 760 RIDEIVVFNPLGKDHIKRIAEMQLSLLAGRMAAQDIGLRVEPAALDEIAEAGFDPHFGAR 819
>gi|387892000|ref|YP_006322297.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens A506]
gi|387162601|gb|AFJ57800.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens A506]
Length = 854
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/666 (63%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + +DL++S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELDLELSSEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|440739028|ref|ZP_20918550.1| chaperone [Pseudomonas fluorescens BRIP34879]
gi|440380400|gb|ELQ16967.1| chaperone [Pseudomonas fluorescens BRIP34879]
Length = 854
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/666 (63%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEIQRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+ +L + + L++S+ AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLQLSREALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|422621047|ref|ZP_16689715.1| AAA ATPase, central region [Pseudomonas syringae pv. japonica str.
M301072]
gi|443641450|ref|ZP_21125300.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
syringae pv. syringae B64]
gi|330901395|gb|EGH32814.1| AAA ATPase, central region [Pseudomonas syringae pv. japonica str.
M301072]
gi|443281467|gb|ELS40472.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
syringae pv. syringae B64]
Length = 854
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQGEIERLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|388469396|ref|ZP_10143605.1| ATP-dependent chaperone protein ClpB [Pseudomonas synxantha BG33R]
gi|388006093|gb|EIK67359.1| ATP-dependent chaperone protein ClpB [Pseudomonas synxantha BG33R]
Length = 854
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/666 (63%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + +DL++S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELDLELSGEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1]
gi|182682296|ref|YP_001830456.1| ATP-dependent chaperone ClpB [Xylella fastidiosa M23]
gi|386083626|ref|YP_005999908.1| ATP-dependent chaperone ClpB [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|54035830|sp|Q87AX8.1|CLPB_XYLFT RecName: Full=Chaperone protein ClpB
gi|28057675|gb|AAO29523.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1]
gi|182632406|gb|ACB93182.1| ATP-dependent chaperone ClpB [Xylella fastidiosa M23]
gi|307578573|gb|ADN62542.1| ATP-dependent chaperone ClpB [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 861
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/717 (59%), Positives = 568/717 (79%), Gaps = 16/717 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L +++ N+ +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL+ ++++I L+ +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLVDLERDIEVLDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG L LE+ L
Sbjct: 455 FSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLV 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+KLL +E L +
Sbjct: 515 AASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDKLLRMEADLGR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII----KLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D + K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMGVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L + AL+ + N
Sbjct: 749 QAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESELKLDLDDRALELLGN 808
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTLRMVYS 720
+GFD +YGAR + K+++ L+ + A GD + G +D ++V+S
Sbjct: 809 VGFDPVYGARPL---KRAIQSQLENALAQQILAGAFVSGDTVQVG---VDGGKLVFS 859
>gi|302185257|ref|ZP_07261930.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Pseudomonas syringae pv. syringae 642]
Length = 854
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQGEIERLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|417558810|ref|ZP_12209770.1| ATPase [Xylella fastidiosa EB92.1]
gi|338178645|gb|EGO81630.1| ATPase [Xylella fastidiosa EB92.1]
Length = 859
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/717 (59%), Positives = 568/717 (79%), Gaps = 16/717 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L +++ N+ +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 333 KVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL+ ++++I L+ +
Sbjct: 393 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLVDLERDIEVLDRE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG L LE+ L
Sbjct: 453 FSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLV 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+KLL +E L +
Sbjct: 513 AASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDKLLRMEADLGR 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 567 RVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSLILLDE+EKA+SDVFN
Sbjct: 627 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII----KLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D + K AVM V
Sbjct: 687 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMGVV 746
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L + AL+ + N
Sbjct: 747 QAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESELKLDLDDRALELLGN 806
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTLRMVYS 720
+GFD +YGAR + K+++ L+ + A GD + G +D ++V+S
Sbjct: 807 VGFDPVYGARPL---KRAIQSQLENALAQQILAGAFVSGDTVQVG---VDGGKLVFS 857
>gi|424070606|ref|ZP_17808040.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|440724230|ref|ZP_20904560.1| ATPase AAA [Pseudomonas syringae BRIP34876]
gi|440728950|ref|ZP_20909149.1| ATPase AAA [Pseudomonas syringae BRIP34881]
gi|408000304|gb|EKG40665.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|440358167|gb|ELP95557.1| ATPase AAA [Pseudomonas syringae BRIP34876]
gi|440360351|gb|ELP97629.1| ATPase AAA [Pseudomonas syringae BRIP34881]
Length = 854
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQGEIERLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|423689870|ref|ZP_17664390.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
SS101]
gi|388002306|gb|EIK63635.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
SS101]
Length = 854
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/666 (63%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + +DL++S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELDLELSGEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|330811801|ref|YP_004356263.1| chaperone [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
gi|378952908|ref|YP_005210396.1| chaperone ClpB [Pseudomonas fluorescens F113]
gi|423699369|ref|ZP_17673859.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q8r1-96]
gi|327379909|gb|AEA71259.1| Chaperone [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
gi|359762922|gb|AEV65001.1| ClpB [Pseudomonas fluorescens F113]
gi|387997271|gb|EIK58601.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q8r1-96]
Length = 854
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/666 (63%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAKKRLERLQEEIVRHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSTQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLQLSDEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|66043993|ref|YP_233834.1| ATPase AAA [Pseudomonas syringae pv. syringae B728a]
gi|63254700|gb|AAY35796.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Pseudomonas syringae pv. syringae B728a]
Length = 854
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQGEIERLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|424065893|ref|ZP_17803366.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408002911|gb|EKG43137.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 854
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEVQALKKEKDEAAIKRLEKLQGEIERLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|423097380|ref|ZP_17085176.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q2-87]
gi|397885254|gb|EJL01737.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q2-87]
Length = 854
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/666 (63%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAKKRLERLQEEILRHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSTQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLQLSDEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|422666963|ref|ZP_16726829.1| AAA ATPase, central region [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330977495|gb|EGH77441.1| AAA ATPase, central region [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 854
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 543/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSPRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQGEIERLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGPLRKRLAERELSMTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|15599738|ref|NP_253232.1| ClpB protein [Pseudomonas aeruginosa PAO1]
gi|116052687|ref|YP_793003.1| clpB protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|254238710|ref|ZP_04932033.1| ClpB protein [Pseudomonas aeruginosa C3719]
gi|296391363|ref|ZP_06880838.1| clpB protein [Pseudomonas aeruginosa PAb1]
gi|313107187|ref|ZP_07793386.1| clpB protein [Pseudomonas aeruginosa 39016]
gi|355652375|ref|ZP_09056771.1| chaperone ClpB [Pseudomonas sp. 2_1_26]
gi|386060694|ref|YP_005977216.1| ClpB protein [Pseudomonas aeruginosa M18]
gi|386064010|ref|YP_005979314.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa NCGM2.S1]
gi|392986205|ref|YP_006484792.1| clpB protein [Pseudomonas aeruginosa DK2]
gi|416858844|ref|ZP_11913559.1| clpB protein [Pseudomonas aeruginosa 138244]
gi|416877399|ref|ZP_11919799.1| clpB protein [Pseudomonas aeruginosa 152504]
gi|418584141|ref|ZP_13148206.1| clpB protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418590194|ref|ZP_13154107.1| clpB protein [Pseudomonas aeruginosa MPAO1/P2]
gi|419752087|ref|ZP_14278496.1| clpB protein [Pseudomonas aeruginosa PADK2_CF510]
gi|421155962|ref|ZP_15615421.1| ClpB protein [Pseudomonas aeruginosa ATCC 14886]
gi|421170310|ref|ZP_15628272.1| ClpB protein [Pseudomonas aeruginosa ATCC 700888]
gi|421176800|ref|ZP_15634459.1| ClpB protein [Pseudomonas aeruginosa CI27]
gi|421519096|ref|ZP_15965768.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa PAO579]
gi|424944692|ref|ZP_18360455.1| ClpB protein [Pseudomonas aeruginosa NCMG1179]
gi|451983095|ref|ZP_21931390.1| ClpB protein [Pseudomonas aeruginosa 18A]
gi|54035903|sp|Q9HVN5.1|CLPB_PSEAE RecName: Full=Chaperone protein ClpB
gi|9950786|gb|AAG07930.1|AE004868_1 ClpB protein [Pseudomonas aeruginosa PAO1]
gi|32423740|gb|AAP81264.1| ClpB [Pseudomonas aeruginosa PA14]
gi|115587908|gb|ABJ13923.1| clpB protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170641|gb|EAZ56152.1| ClpB protein [Pseudomonas aeruginosa C3719]
gi|310879888|gb|EFQ38482.1| clpB protein [Pseudomonas aeruginosa 39016]
gi|334838994|gb|EGM17693.1| clpB protein [Pseudomonas aeruginosa 138244]
gi|334839646|gb|EGM18324.1| clpB protein [Pseudomonas aeruginosa 152504]
gi|346061138|dbj|GAA21021.1| ClpB protein [Pseudomonas aeruginosa NCMG1179]
gi|347307000|gb|AEO77114.1| ClpB protein [Pseudomonas aeruginosa M18]
gi|348032569|dbj|BAK87929.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa NCGM2.S1]
gi|354824206|gb|EHF08460.1| chaperone ClpB [Pseudomonas sp. 2_1_26]
gi|375046270|gb|EHS38835.1| clpB protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050967|gb|EHS43442.1| clpB protein [Pseudomonas aeruginosa MPAO1/P2]
gi|384401664|gb|EIE48018.1| clpB protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392321710|gb|AFM67090.1| clpB protein [Pseudomonas aeruginosa DK2]
gi|404346081|gb|EJZ72432.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa PAO579]
gi|404519555|gb|EKA30289.1| ClpB protein [Pseudomonas aeruginosa ATCC 14886]
gi|404523842|gb|EKA34234.1| ClpB protein [Pseudomonas aeruginosa ATCC 700888]
gi|404530437|gb|EKA40437.1| ClpB protein [Pseudomonas aeruginosa CI27]
gi|451759229|emb|CCQ83913.1| ClpB protein [Pseudomonas aeruginosa 18A]
gi|453046121|gb|EME93838.1| clpB protein [Pseudomonas aeruginosa PA21_ST175]
Length = 854
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+ + +I
Sbjct: 215 IVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELGKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEEDIVKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++++++Y + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDREAQRAAVMDAVNAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ AL K+ +GFD
Sbjct: 748 RPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEALDKLIAVGFD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|218893637|ref|YP_002442506.1| ClpB protein [Pseudomonas aeruginosa LESB58]
gi|421182603|ref|ZP_15640077.1| ClpB protein [Pseudomonas aeruginosa E2]
gi|218773865|emb|CAW29679.1| ClpB protein [Pseudomonas aeruginosa LESB58]
gi|404541751|gb|EKA51100.1| ClpB protein [Pseudomonas aeruginosa E2]
Length = 854
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+ + +I
Sbjct: 215 IVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELGKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEEDIVKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++++++Y + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDREAQRAAVMDAVNAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ AL K+ +GFD
Sbjct: 748 RPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEALDKLIAVGFD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|170723706|ref|YP_001751394.1| ATP-dependent chaperone ClpB [Pseudomonas putida W619]
gi|169761709|gb|ACA75025.1| ATP-dependent chaperone ClpB [Pseudomonas putida W619]
Length = 854
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E+LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEDLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA++AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVTAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-AGDREAQRAAVMDAVGAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID+++VF L R+ I I IQL L+++L + + L +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVVFEPLGREQIAGITEIQLGRLRSRLSERELALSLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|410092213|ref|ZP_11288746.1| clpB protein [Pseudomonas viridiflava UASWS0038]
gi|409760455|gb|EKN45601.1| clpB protein [Pseudomonas viridiflava UASWS0038]
Length = 854
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 545/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ +I +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLDKLQDDIQRLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLKMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVSTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID++++F L R I I +IQL+ L+ +L + + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVIFEPLARDQIAGITDIQLDRLRKRLTERELSLTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|107099795|ref|ZP_01363713.1| hypothetical protein PaerPA_01000813 [Pseudomonas aeruginosa PACS2]
Length = 849
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 150 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 209
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+ + +I
Sbjct: 210 IVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELGKQEGRVI 269
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 270 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 329
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 330 KVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAIDLI 389
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++++I KLE +
Sbjct: 390 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEEDIVKLERE 449
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++++++Y + LER L+
Sbjct: 450 YADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQ 509
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L +
Sbjct: 510 MVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQELHR 563
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 564 RVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 623
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS++LLDE+EKA+ DVFN
Sbjct: 624 LVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFN 683
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 684 ILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDREAQRAAVMDAVNAHF 742
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ AL K+ +GFD
Sbjct: 743 RPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEALDKLIAVGFD 802
Query: 668 LIYGAR 673
+YGAR
Sbjct: 803 PVYGAR 808
>gi|395650246|ref|ZP_10438096.1| chaperone [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 854
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWSAEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVAQ------HGHSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSMQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+ +L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRARLAERELSLELSTEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|420138348|ref|ZP_14646277.1| ClpB protein [Pseudomonas aeruginosa CIG1]
gi|421162907|ref|ZP_15621700.1| ClpB protein [Pseudomonas aeruginosa ATCC 25324]
gi|403248928|gb|EJY62455.1| ClpB protein [Pseudomonas aeruginosa CIG1]
gi|404532674|gb|EKA42547.1| ClpB protein [Pseudomonas aeruginosa ATCC 25324]
Length = 854
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+ + +I
Sbjct: 215 IVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELGKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEEDIVKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE IWK EK ++ S QI+++IE+ + ++ A RK D +++++++Y + LER L+
Sbjct: 455 YADLEDIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDREAQRAAVMDAVNAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ AL K+ +GFD
Sbjct: 748 RPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEALDKLIAVGFD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|409417475|ref|ZP_11257524.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
sp. HYS]
Length = 854
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/666 (63%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTIDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEKLTEEIARLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E+LL +
Sbjct: 515 MVDQ------HGKAENQLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLKMESLLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSSQIQEL-VGDREAQRAAVMDAVGSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITQIQLGRLRSRLTERELSLELSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398848122|ref|ZP_10604958.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM84]
gi|398249906|gb|EJN35274.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM84]
Length = 854
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E+LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEDLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQNEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID+++VF L R I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVVFEPLGRDQIAGITEIQLGRLRSRLLERELALSLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|447915151|ref|YP_007395719.1| chaperone [Pseudomonas poae RE*1-1-14]
gi|445199014|gb|AGE24223.1| chaperone [Pseudomonas poae RE*1-1-14]
Length = 854
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEIQRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+ L +
Sbjct: 515 MVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESQLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+ +L + + L++S+ AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLQLSREALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|71730024|gb|EAO32116.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Ann-1]
Length = 861
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/717 (59%), Positives = 568/717 (79%), Gaps = 16/717 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L +++ N+ +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL+ ++++I L+ +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLVDLERDIEVLDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG L LE+ L
Sbjct: 455 FSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLV 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+KLL +E L +
Sbjct: 515 AASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDKLLRMEADLGR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+ RR+PYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELARRRPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII----KLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D + K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMGVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+++FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L + AL+ + N
Sbjct: 749 QVHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESELKLDLDDRALELLGN 808
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTLRMVYS 720
+GFD +YGAR + K+++ L+ + A GD + G +D ++V+S
Sbjct: 809 VGFDPVYGARPL---KRAIQSQLENPLAQQILAGAFVSGDTVQVG---VDGGKLVFS 859
>gi|422674213|ref|ZP_16733568.1| AAA ATPase, central region [Pseudomonas syringae pv. aceris str.
M302273]
gi|330971942|gb|EGH72008.1| AAA ATPase, central region [Pseudomonas syringae pv. aceris str.
M302273]
Length = 854
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQGEIERLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + ++ AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLTPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|152985423|ref|YP_001350513.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa PA7]
gi|150960581|gb|ABR82606.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa PA7]
Length = 854
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTRRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+ + +I
Sbjct: 215 IVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELGKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEEDIVKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++++++Y + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDREAQRAAVMDAVNAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L +S+ AL K+ +GFD
Sbjct: 748 RPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLDLSQEALDKLIAVGFD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|71736209|ref|YP_273034.1| clpB protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257481615|ref|ZP_05635656.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|289627152|ref|ZP_06460106.1| clpB protein [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|416014082|ref|ZP_11562002.1| clpB protein [Pseudomonas syringae pv. glycinea str. B076]
gi|416024302|ref|ZP_11568434.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|422584377|ref|ZP_16659487.1| clpB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422598531|ref|ZP_16672791.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422679424|ref|ZP_16737698.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|71556762|gb|AAZ35973.1| clpB protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320326251|gb|EFW82305.1| clpB protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320330675|gb|EFW86652.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330869194|gb|EGH03903.1| clpB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330988808|gb|EGH86911.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331008772|gb|EGH88828.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 854
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++E+ +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEVVRLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + L +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|452876832|ref|ZP_21954166.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa VRFPA01]
gi|452186377|gb|EME13395.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa VRFPA01]
Length = 774
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 75 EESRQALDKYTVDMTRRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 134
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+ + +I
Sbjct: 135 IVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELGKQEGRVI 194
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 195 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 254
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 255 KVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAIDLI 314
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++++I KLE +
Sbjct: 315 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEEDIVKLERE 374
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++++++Y + LER L+
Sbjct: 375 YADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQ 434
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L +
Sbjct: 435 MVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQELHR 488
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 489 RVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 548
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS++LLDE+EKA+ DVFN
Sbjct: 549 LVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFN 608
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 609 ILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDREAQRAAVMDAVNAHF 667
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L +S+ AL K+ +GFD
Sbjct: 668 RPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLDLSQEALGKLIAVGFD 727
Query: 668 LIYGAR 673
+YGAR
Sbjct: 728 PVYGAR 733
>gi|359796795|ref|ZP_09299388.1| chaperone protein ClpB [Achromobacter arsenitoxydans SY8]
gi|359365241|gb|EHK66945.1| chaperone protein ClpB [Achromobacter arsenitoxydans SY8]
Length = 868
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/664 (63%), Positives = 550/664 (82%), Gaps = 4/664 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE+ + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELGQDDGRNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I++E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLAVIEEELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK----EK 369
IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG+L LE LK
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYGKLPDLEARLKAAEVGA 519
Query: 370 SQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRV 429
++ + ++ LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLLN+E L +RV
Sbjct: 520 AEAAENAEGDESRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQGEREKLLNMEEFLHRRV 579
Query: 430 VGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESII 489
VGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +I
Sbjct: 580 VGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALAEFLFDSEEHMI 639
Query: 490 RIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNIL 549
RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+L
Sbjct: 640 RIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVL 699
Query: 550 LQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRP 609
LQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +++K V +E+K RP
Sbjct: 700 LQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLAGQPYDVVKEVVWDELKQTLRP 759
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EF+NRID+++VF L ++I SIA IQL L +L + M L++++ AL +++ GFD +
Sbjct: 760 EFLNRIDEVVVFHGLEAQHIESIARIQLRRLGERLERQEMRLEVTEPALAELARSGFDPV 819
Query: 670 YGAR 673
+GAR
Sbjct: 820 FGAR 823
>gi|92112632|ref|YP_572560.1| ATPase AAA-2 [Chromohalobacter salexigens DSM 3043]
gi|91795722|gb|ABE57861.1| ATPase AAA-2 [Chromohalobacter salexigens DSM 3043]
Length = 860
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/668 (61%), Positives = 548/668 (82%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESREALDKYTTDLTQRAGEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ LLAG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKDKRVLALDMGSLLAGAKYRGEFEERLKAVLGELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFVDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQHIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP+ E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPNEEDTVAILRGLKERYEVHHGVDITDGAIIAAAKLSTRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DS PE MD+L+RRLIQLK+E EA+K+E DE++KKRL ++ +I LE +
Sbjct: 395 DEAASRIRMELDSMPEEMDRLDRRLIQLKMEREALKKETDEATKKRLDSLEAQIESLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++WK EK I+ + Q K E+E+ R+ + A R+ D +S+L+YG + KLE+ +
Sbjct: 455 YADLEEVWKAEKASIQGAAQFKAELEQARIDLEAARRQGDLGRMSELQYGVIPKLEKQIA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E S+++ + K LL++ V EEIAE+VSR TGIPVSK+++ ER+KLL +E L +
Sbjct: 515 EASEQE----TDTAKHQLLRSNVTEEEIAEVVSRWTGIPVSKMLEGERDKLLRMEEALHE 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA++AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK+L++ +F+ EE+
Sbjct: 571 RVIGQDEAVTAVANAVRRSRAGLADPGRPNGSFLFLGPTGVGKTELCKSLASFLFDTEEA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA++DVFN
Sbjct: 631 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+ M + D ++ AVM V
Sbjct: 691 ILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQRMGGDDADYGAMRDAVMGVVGD 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPE INRID+++VF L ++ I SIA IQL LK +L + + L++S AL +++ +G
Sbjct: 751 HFRPELINRIDEVVVFHALGQEQIQSIAGIQLERLKARLAEREIRLEVSDDALAQLAVVG 810
Query: 666 FDLIYGAR 673
FD ++GAR
Sbjct: 811 FDPVFGAR 818
>gi|28868056|ref|NP_790675.1| clpB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213971039|ref|ZP_03399159.1| clpB protein [Pseudomonas syringae pv. tomato T1]
gi|301384237|ref|ZP_07232655.1| clpB protein [Pseudomonas syringae pv. tomato Max13]
gi|302059470|ref|ZP_07251011.1| clpB protein [Pseudomonas syringae pv. tomato K40]
gi|302134988|ref|ZP_07260978.1| clpB protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422296834|ref|ZP_16384494.1| clpB protein [Pseudomonas avellanae BPIC 631]
gi|422591482|ref|ZP_16666125.1| clpB protein [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|422659776|ref|ZP_16722198.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M302278]
gi|54035835|sp|Q889C2.1|CLPB_PSESM RecName: Full=Chaperone protein ClpB
gi|28851292|gb|AAO54370.1| clpB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213924147|gb|EEB57722.1| clpB protein [Pseudomonas syringae pv. tomato T1]
gi|330878991|gb|EGH13140.1| clpB protein [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|331018391|gb|EGH98447.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M302278]
gi|407991919|gb|EKG33653.1| clpB protein [Pseudomonas avellanae BPIC 631]
Length = 854
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEIVRLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVSTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398857371|ref|ZP_10613071.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM79]
gi|398240962|gb|EJN26625.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM79]
Length = 854
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTIDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEITRHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPV+K+++ EREKL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLEGEREKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|152979666|ref|YP_001345295.1| ATPase [Actinobacillus succinogenes 130Z]
gi|150841389|gb|ABR75360.1| ATPase AAA-2 domain protein [Actinobacillus succinogenes 130Z]
Length = 856
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/700 (60%), Positives = 554/700 (79%), Gaps = 14/700 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+A GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTERAESGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +LKE++ + +I+FIDE+
Sbjct: 221 QRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERLKAVLKELAQEEGSVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVGE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLQERYELHHHVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKP +DKLERR+IQLK+E +A+K+E DE+S+KRL +++KE+ + E +YA LE+
Sbjct: 401 IRMEIDSKPLPLDKLERRIIQLKLEQQALKKEDDEASRKRLEMLEKELAEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK E+E R ++ +A R D +S+L+YG + LE+ L + + +
Sbjct: 461 VWKSEKAALSGTQHIKAELENARTQMEQARRAGDLNKMSELQYGTIPALEKQLADADKSE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LL+ +V EEIAE++SR TGIPVS++++ E+EKLL +E L KRVVGQ
Sbjct: 521 ------GKEMKLLRYRVTDEEIAEVLSRATGIPVSRMMEGEKEKLLRMEQELHKRVVGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +++RIDM
Sbjct: 575 EAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDDENAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E E +K VM+ V +FRPEFIN
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQENRSLGYEGMKEIVMSVVGQHFRPEFIN 754
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L ++NI +IA IQL L ++ + + S AAL IS +G+D IYGAR
Sbjct: 755 RIDETVVFHPLAKENIKAIAQIQLARLAKRMAEHGYQISFSDAALDFISEVGYDPIYGAR 814
Query: 674 DVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
+ K+++ + ++P AN I G L+ P ++D
Sbjct: 815 PL---KRAIQQEI-----ENPLANEILSGKLLPSKPVTVD 846
>gi|407368577|ref|ZP_11115109.1| chaperone ClpB [Pseudomonas mandelii JR-1]
Length = 854
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|229588328|ref|YP_002870447.1| chaperone [Pseudomonas fluorescens SBW25]
gi|229360194|emb|CAY47051.1| chaperone [Pseudomonas fluorescens SBW25]
Length = 854
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+ +L + + L +S+ AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLTERELSLDLSQEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|395499146|ref|ZP_10430725.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. PAMC 25886]
Length = 854
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/666 (63%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE +KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEPAKKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDALTSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S+ AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELSLELSREALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|423018803|ref|ZP_17009524.1| chaperone protein ClpB 1 [Achromobacter xylosoxidans AXX-A]
gi|338778101|gb|EGP42583.1| chaperone protein ClpB 1 [Achromobacter xylosoxidans AXX-A]
Length = 868
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/664 (64%), Positives = 548/664 (82%), Gaps = 4/664 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTMDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE+S + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELSQDDGSNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I+ E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLGVIEDELEKLQREYNDFEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK----EK 369
IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG+L LE LK
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYGKLPDLEARLKAAEVGA 519
Query: 370 SQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRV 429
++ + + LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL++E L KRV
Sbjct: 520 AEAAEEAEGGEGRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQGEREKLLHMEEYLHKRV 579
Query: 430 VGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESII 489
VGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +I
Sbjct: 580 VGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALAEFLFDSEEHMI 639
Query: 490 RIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNIL 549
RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+L
Sbjct: 640 RIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVL 699
Query: 550 LQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRP 609
LQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +++K V E+K RP
Sbjct: 700 LQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQTLAGQPYDVVKEVVWGELKQTLRP 759
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EF+NRID+++VF L ++I SIA IQL L +L K M L++++ AL +++ GFD +
Sbjct: 760 EFLNRIDEVVVFHGLEAQHIESIARIQLRRLAERLEKQEMRLEVTEPALAELARDGFDPV 819
Query: 670 YGAR 673
+GAR
Sbjct: 820 FGAR 823
>gi|408483875|ref|ZP_11190094.1| chaperone [Pseudomonas sp. R81]
Length = 854
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/666 (63%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREGQRAAVMDALTSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+ +L + +DL +S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELDLVLSSEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|298160065|gb|EFI01097.1| ClpB protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 854
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/666 (63%), Positives = 543/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DL ++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLAKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++E+ +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEVVRLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + L +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|422318953|ref|ZP_16400043.1| chaperone ClpB [Achromobacter xylosoxidans C54]
gi|317406406|gb|EFV86623.1| chaperone ClpB [Achromobacter xylosoxidans C54]
Length = 868
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/664 (64%), Positives = 548/664 (82%), Gaps = 4/664 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LAKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE+S + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELSQDDGSNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I+ E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLGVIEDELEKLQREYNDFEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK----EK 369
IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG+L LE LK
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYGKLPDLEARLKAAEVGA 519
Query: 370 SQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRV 429
++ + + LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL++E L KRV
Sbjct: 520 AEAAEEAEGGEGRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQGEREKLLHMEEYLHKRV 579
Query: 430 VGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESII 489
VGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +I
Sbjct: 580 VGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALAEFLFDSEEHMI 639
Query: 490 RIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNIL 549
RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+L
Sbjct: 640 RIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVL 699
Query: 550 LQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRP 609
LQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +++K V E+K RP
Sbjct: 700 LQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQTLAGQPYDVVKEVVWGELKQTLRP 759
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EF+NRID+++VF L ++I SIA IQL L +L K M L++++ AL +++ GFD +
Sbjct: 760 EFLNRIDEVVVFHGLEAQHIESIARIQLRRLAERLEKQEMRLEVTEPALAELARDGFDPV 819
Query: 670 YGAR 673
+GAR
Sbjct: 820 FGAR 823
>gi|311107398|ref|YP_003980251.1| chaperone protein ClpB [Achromobacter xylosoxidans A8]
gi|310762087|gb|ADP17536.1| chaperone protein ClpB 1 [Achromobacter xylosoxidans A8]
Length = 868
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/664 (64%), Positives = 548/664 (82%), Gaps = 4/664 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTMDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE+S + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELSLDDGSNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I+ E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLGVIEDELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK----EK 369
IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG+L LE LK
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYGKLPDLEARLKAAEVGA 519
Query: 370 SQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRV 429
++ + LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL++E L KRV
Sbjct: 520 AEAAEDAEGGEGRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQGEREKLLHMEEYLHKRV 579
Query: 430 VGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESII 489
VGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +I
Sbjct: 580 VGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALAEFLFDSEEHMI 639
Query: 490 RIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNIL 549
RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+L
Sbjct: 640 RIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVL 699
Query: 550 LQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRP 609
LQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +++K V +E+K RP
Sbjct: 700 LQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLAGKPYDVVKEVVWDELKQTLRP 759
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EF+NRID+++VF L ++I SIA IQL L +L K M L++S+ AL +++ GFD +
Sbjct: 760 EFLNRIDEVVVFHGLEAQHIESIARIQLRRLGERLEKQEMRLEVSEPALAELARSGFDPV 819
Query: 670 YGAR 673
+GAR
Sbjct: 820 FGAR 823
>gi|431931585|ref|YP_007244631.1| ATP-dependent chaperone ClpB [Thioflavicoccus mobilis 8321]
gi|431829888|gb|AGA91001.1| ATP-dependent chaperone ClpB [Thioflavicoccus mobilis 8321]
Length = 864
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/694 (60%), Positives = 554/694 (79%), Gaps = 10/694 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K++IDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LQKFSIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L SK++L LD+A L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKSKRLLALDMAALIAGAKYRGEFEERLKAVLNDVARQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYVEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAAA+
Sbjct: 341 PSVEDTIAILRGLKERYEVHHAVEITDPAIVAAATLSHRYITDRQLPDKAIDLIDEAAAQ 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+++EIDS PE MD+L+RRLIQLKIE EA+++E DE+SKKRL ++++I +LE ++++L++
Sbjct: 401 LRVEIDSMPEEMDRLDRRLIQLKIEQEAVRKETDEASKKRLADLEEQIERLEREFSDLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ + IKEE+++ R + A R D +S+L+YG + +LER L Q +
Sbjct: 461 IWKAEKAAVQGTAHIKEELDRARFEYETARRAGDLARMSELQYGRIPELERQLANAEQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LL+ KV +EEIAEIVS+ TGIPVS++++ ER+KLL +E L RVVGQD
Sbjct: 521 ------QGETRLLRNKVTAEEIAEIVSKWTGIPVSRMLEGERDKLLRMEAALEHRVVGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVS+AIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+++R+DM
Sbjct: 575 EALRAVSDAIRRSRAGLADPARPIGSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSLILLDE+EKA+ DVFN+LLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDEVEKAHPDVFNVLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRN ++VMTSNLGS+ I ++ + + +K +VM V+ FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNAVVVMTSNLGSEVIQRQAGEANYAAMKESVMEIVRQAFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+I+VF L + I +IA IQ+ L+ +L M L+IS AAL + GFD +YGA
Sbjct: 755 NRLDEIVVFHPLQPEQIRAIARIQIRYLQTRLADREMRLEISDAALDHLGEAGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
R + K+++ L+ ++ A GDLI
Sbjct: 815 RPL---KRAIRTQLENPLAQAILAGRFSPGDLIE 845
>gi|374621369|ref|ZP_09693901.1| ATP-dependent chaperone ClpB [Ectothiorhodospira sp. PHS-1]
gi|373940502|gb|EHQ51047.1| ATP-dependent chaperone ClpB [Ectothiorhodospira sp. PHS-1]
Length = 864
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/667 (62%), Positives = 548/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRKALEKYTIDLTERAEQGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI++GEVP L +++L LD+ L+AG K+RG+FE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIVDGEVPEGLKDRRLLSLDMGALIAGAKFRGDFEERLKAVLSDLAKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+Y+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRKYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP++E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVNEPNVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MD+LERRLIQLKIE EA+++E DE+S KRL ++ EI++LE +
Sbjct: 395 DEAASRIRMEIDSKPESMDRLERRLIQLKIEREALRKESDEASLKRLEALEGEIDRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++L++IWK EK + + IKEE+E+ RL++ A R D +S+L+YG + +LER L
Sbjct: 455 YSDLDEIWKAEKAALSGTASIKEELERARLELETARRAGDLGRMSELQYGRIPELERQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++ ++ LL+ KV EEIAE+VSR TGIPV+K+++ EREKLL +E L +
Sbjct: 515 MAAQAEM------HEMRLLRNKVTDEEIAEVVSRWTGIPVAKMLEGEREKLLRMEEALTR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AV++AIRR+R+GLSD RP GSF+FLGPTGVGKTEL K L+A +F+ +E+
Sbjct: 569 RVVGQDEAVRAVADAIRRARAGLSDPNRPNGSFLFLGPTGVGKTELTKALAAFLFDTDEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRN++IVMTSNLGS I+EM + + +K AVM V +
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNSVIVMTSNLGSQLIQEMAGEEHYDQMKAAVMEVVGTH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+++VF L R I +I IQL+ L+ +L ++ L +S+AAL ++ GF
Sbjct: 749 FRPEFINRVDEVVVFHPLGRDQIRAITTIQLDYLRRRLADRDLRLTVSEAALDRLGEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|452124651|ref|ZP_21937235.1| ATP-dependent protease ATPase subunit [Bordetella holmesii F627]
gi|452128044|ref|ZP_21940623.1| ATP-dependent protease ATPase subunit [Bordetella holmesii H558]
gi|451923881|gb|EMD74022.1| ATP-dependent protease ATPase subunit [Bordetella holmesii F627]
gi|451926259|gb|EMD76395.1| ATP-dependent protease ATPase subunit [Bordetella holmesii H558]
Length = 867
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/663 (64%), Positives = 557/663 (84%), Gaps = 3/663 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGL
Sbjct: 160 LSKYTMDLTERAREGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLT 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE+S + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELSQDDGQNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 340 PDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I++E+ +L+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLAVIEEELERLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK--EKSQ 371
IWK EK ++ +Q IKEEI++VR + + RK + +++L+YG+L +LE LK + ++
Sbjct: 460 IWKAEKAAVQCTQSIKEEIDRVRADMAELQRKGQFDKLAELQYGKLPELEARLKAADMAE 519
Query: 372 KDIQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVV 430
+D++ A K LL+T+VG+EEIAE+VSR TGIPVSK+++ ER+KLL++E+ L +RVV
Sbjct: 520 EDVERAEVAGGKPRLLRTQVGAEEIAEVVSRATGIPVSKMMEGERDKLLHMEDALHQRVV 579
Query: 431 GQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIR 490
GQ+EA S V++AIRRSR+GL+D +PYGSF+FLGPTGVGKTEL + L+ +F++EE +IR
Sbjct: 580 GQEEACSLVADAIRRSRAGLADPSKPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIR 639
Query: 491 IDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILL 550
IDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EK + DVFN+LL
Sbjct: 640 IDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKTHPDVFNVLL 699
Query: 551 QILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPE 610
Q+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+ M E+IK VM E+K RPE
Sbjct: 700 QVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQQIQSMTGKPYEVIKDVVMEELKQTLRPE 759
Query: 611 FINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIY 670
F+NRID+++VF L+ ++I SIA IQ+ L +L K M L+++ AL +I+ +GFD ++
Sbjct: 760 FLNRIDEVVVFHALDAQHIESIARIQIRRLAERLEKQEMQLEVTDTALSEIARVGFDPVF 819
Query: 671 GAR 673
GAR
Sbjct: 820 GAR 822
>gi|398931122|ref|ZP_10664981.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM48]
gi|398164265|gb|EJM52407.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM48]
Length = 854
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIARHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ EREKL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|312958896|ref|ZP_07773415.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Pseudomonas
fluorescens WH6]
gi|311286666|gb|EFQ65228.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Pseudomonas
fluorescens WH6]
Length = 854
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEILRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMEHLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+ +L + + L++S+ AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLELSREALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398913136|ref|ZP_10656309.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM49]
gi|398181097|gb|EJM68668.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM49]
Length = 854
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/666 (63%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIARHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKL+ +E+LL +
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398896328|ref|ZP_10647457.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM55]
gi|398178588|gb|EJM66233.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM55]
Length = 854
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL ++ EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQDEIARHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ EREKL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398840843|ref|ZP_10598074.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM102]
gi|398109674|gb|EJL99594.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM102]
Length = 854
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTIDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLERLQEEIVRHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPV+K+++ EREKL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLEGEREKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398901541|ref|ZP_10650394.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM50]
gi|398179622|gb|EJM67226.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM50]
Length = 854
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTIDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIVRHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPV+K+++ EREKL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLEGEREKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|395795264|ref|ZP_10474573.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. Ag1]
gi|421142087|ref|ZP_15602063.1| ClpB protein [Pseudomonas fluorescens BBc6R8]
gi|395340627|gb|EJF72459.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. Ag1]
gi|404506481|gb|EKA20475.1| ClpB protein [Pseudomonas fluorescens BBc6R8]
Length = 854
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/666 (63%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE +KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEPAKKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDALTSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L +S+ AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELSLVLSREALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|71276549|ref|ZP_00652823.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Dixon]
gi|170730931|ref|YP_001776364.1| ATP-dependent Clp protease subunit [Xylella fastidiosa M12]
gi|71162620|gb|EAO12348.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Dixon]
gi|71729142|gb|EAO31265.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Ann-1]
gi|167965724|gb|ACA12734.1| ATP-dependent Clp protease subunit [Xylella fastidiosa M12]
Length = 861
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/717 (59%), Positives = 567/717 (79%), Gaps = 16/717 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L +++ N+ +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL ++++I L+ +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLADLERDIEVLDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG L LE+ L
Sbjct: 455 FSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLV 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+KLL +E L +
Sbjct: 515 AASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDKLLRMEADLGR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVVGQEEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII----KLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D + K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMGVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L + AL+ + N
Sbjct: 749 QAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESELKLDLDDRALELLGN 808
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTLRMVYS 720
+GFD +YGAR + K+++ L+ + A GD + G +D ++V++
Sbjct: 809 VGFDPVYGARPL---KRAIQSQLENPLAQQILAGAFVSGDTVQVG---VDGGKLVFA 859
>gi|399001519|ref|ZP_10704232.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM18]
gi|398127409|gb|EJM16819.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM18]
Length = 854
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTIDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIARHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK + S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVHGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPV+K+++ EREKL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLEGEREKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-IGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398873431|ref|ZP_10628689.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM74]
gi|398199644|gb|EJM86580.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM74]
Length = 854
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIARHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ EREKL+ +E+LL +
Sbjct: 515 MVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|289651391|ref|ZP_06482734.1| clpB protein [Pseudomonas syringae pv. aesculi str. 2250]
Length = 854
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/666 (63%), Positives = 543/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++E+ +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEVVRLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S I+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAHIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEKGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + L +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALTLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398865238|ref|ZP_10620760.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM78]
gi|398243762|gb|EJN29341.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM78]
Length = 854
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIKRLEKLQEEIARLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELESARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKL+ +E+LL +
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREGQRAAVMDAISSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|226943326|ref|YP_002798399.1| ATP-dependent protease [Azotobacter vinelandii DJ]
gi|226718253|gb|ACO77424.1| ATP-dependent protease [Azotobacter vinelandii DJ]
Length = 854
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KY +D+T +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYCVDMTARAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLRDKRLLALDMGSLIAGAKFRGEFEERLKAVLNELAKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKETDEATKKRLAKLEEDIAKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI++++E+ +L + A RK D +++L+YG + +LER L
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQQLEQAKLDLEAARRKGDLNRMAELQYGLIPELERKL- 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D P LL+ +V EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 514 --ASADGGQPRENQ---LLRNRVTDEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQNEAVTAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT++VMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVVVMTSNLGSAQIQEL-AGDREAQRAAVMDAVSHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLAREQIAGIAEIQLKRLRQRLAERELSLELSDEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398992528|ref|ZP_10695493.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM21]
gi|398136829|gb|EJM25907.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM21]
Length = 854
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L +S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLDLSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|53802726|ref|YP_115493.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Methylococcus
capsulatus str. Bath]
gi|53756487|gb|AAU90778.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Methylococcus
capsulatus str. Bath]
Length = 859
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/662 (63%), Positives = 536/662 (80%), Gaps = 9/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LQKYTIDLTERAERGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP + K++L LD+A L+AG K+RGEFE+RLK +L +I+ + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGVKGKRLLALDMAGLIAGAKFRGEFEERLKGVLNDIAKQEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YEVHHGV ITDPAIVAA+ LS+RYI+DR +PDKAIDL+DEAA++
Sbjct: 341 PTVEDTIAILRGLKERYEVHHGVTITDPAIVAAATLSHRYITDRQLPDKAIDLVDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+L+RRLIQL+IE EA+K+E DE+SKKRL ++ EI KLE +YA+LE+
Sbjct: 401 IRMEIDSKPEEMDRLDRRLIQLRIEREALKKETDEASKKRLEALEGEIGKLEKEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + IKEE+EK RL ++ A R D +++Y + LE+ L
Sbjct: 461 IWKSEKARLSGAASIKEELEKARLDLDNAKRSGDLTRAGQIQYERIPALEKRLA------ 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ ++F LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL++E L +RVVGQ
Sbjct: 515 VAEAGEDSEFRLLRNKVTDEEIAEVVSKWTGIPVAKMLEGEREKLLHMEENLSRRVVGQQ 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI+AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ +E+++RIDM
Sbjct: 575 EAITAVANAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALAEFLFDTDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKIYFRPEF 611
DDGRLTD GRT++FRN ++VMTSNLGS++I+E+ G+ +K VM V YFRPEF
Sbjct: 695 DDGRLTDGHGRTVDFRNAVVVMTSNLGSNRIQEL-AGEAHYAEMKAEVMEIVGQYFRPEF 753
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+ +VF L R+ I +IA +Q+ L+ +L + L +S AAL + GFD +YG
Sbjct: 754 INRIDEAVVFHPLGREQIRAIARLQVRHLQERLEARELSLVVSDAALDLLGEAGFDPVYG 813
Query: 672 AR 673
AR
Sbjct: 814 AR 815
>gi|374705469|ref|ZP_09712339.1| ATP-dependent chaperone ClpB [Pseudomonas sp. S9]
Length = 854
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 545/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IAEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHRVAITDSAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E EA+K+E DE++ KRL +K +I +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEREALKKEDDEATLKRLEKLKDDIARLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE IWK EK ++ S QI+++IE+ R ++ A RKSD + ++KL+Y + LER L+
Sbjct: 455 YADLEDIWKSEKAEVQGSAQIQQKIEQARQELETARRKSDLEAMAKLQYSVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGKTENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMEDLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+E + AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQNEGVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT++VMTSNLGS +I+E+ GD+E AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVVVMTSNLGSAQIQEL-VGDREAQHAAVMDAVTTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L +L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLAREKIGGIAKIQLGRLHQRLAERELSLELSDEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|390949641|ref|YP_006413400.1| ATP-dependent chaperone ClpB [Thiocystis violascens DSM 198]
gi|390426210|gb|AFL73275.1| ATP-dependent chaperone ClpB [Thiocystis violascens DSM 198]
Length = 866
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/667 (62%), Positives = 542/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 156 EEQRQALQKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 215
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+A L+AG K+RGEFE+RLK +L +I + +I
Sbjct: 216 IVEGLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERLKAVLNDIGRQEGQVI 275
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQ
Sbjct: 276 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQ 335
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP++E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 336 KVLVDEPNVEDTIAILRGLKERYEVHHAVEITDPAIVAAAVLSHRYIADRQLPDKAIDLI 395
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDS PE MDKL RRLIQLKIE A+K+E DE+S+KRL ++ +I +LE +
Sbjct: 396 DEAASQIRMEIDSMPEEMDKLSRRLIQLKIERMALKKESDEASRKRLSDLEGQIERLERE 455
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+A+L++IWK EK ++ + IKE +++ R+++ A R SD +S+L+YG + +LE+ L
Sbjct: 456 FADLDEIWKSEKAAVQGTAHIKEALDRARMEMETARRASDLARMSELQYGRIPELEKQLA 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+TKV EEIAEIVS+ TGIPVS++++ ER+KLL +E+ + +
Sbjct: 516 RAGE------GGQGENRLLRTKVTEEEIAEIVSKWTGIPVSRMLEGERDKLLRMESEIER 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ +VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+A +F+ EE+
Sbjct: 570 RVVGQNEAVRSVSDAVRRSRAGLSDPGRPIGSFLFLGPTGVGKTELCKALAAFLFDTEEA 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+E+HS++RLIGAPPGY+GYEEGGYLTE +RR+PYSLILLDE+EKA+ DVFN
Sbjct: 630 MVRIDMSEFMERHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDEVEKAHPDVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++ + + +K AVM EV+
Sbjct: 690 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSSIIQQRAGEANYAAMKEAVMEEVRHA 749
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+I+VF L I +IA IQL+ L+ +L +M L + +AL + GF
Sbjct: 750 FRPEFINRLDEIVVFHPLQPSQIRAIARIQLDFLQQRLADRDMRLTVDDSALDHLGAAGF 809
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 810 DPVYGAR 816
>gi|422653309|ref|ZP_16716077.1| clpB protein [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330966360|gb|EGH66620.1| clpB protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 854
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/666 (63%), Positives = 543/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEIVRLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVSTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
PEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 HPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|441504482|ref|ZP_20986476.1| ClpB protein [Photobacterium sp. AK15]
gi|441427949|gb|ELR65417.1| ClpB protein [Photobacterium sp. AK15]
Length = 857
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/667 (62%), Positives = 548/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTA
Sbjct: 155 EENRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E+S + +II
Sbjct: 215 IVEGLAQRIVNGEVPEGLRHKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSQEEGNII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVEEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+ +E D++S KRL + +E++K E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALVKESDDASHKRLKDLSEELDKKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK E+E+ R + A R D +S+L+YG++ +LE+ L
Sbjct: 455 YAELEEVWNAEKAALSGTQHIKTELEQARTDMEIARRAGDLNRMSELQYGKIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LLK KV EIAE++SR TGIPV+K+++ EREKLL++E L K
Sbjct: 515 LAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVAKMLEGEREKLLHMEEALHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++E++
Sbjct: 569 RVIGQDEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFMFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGSD+I+E + D + IK VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSDRIQEHFGELDYDGIKHTVMEVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L +++I +IANIQ+ L +L + + L++ ++AL+ IS GF
Sbjct: 749 FRPEFINRVDETVVFHPLGQEHIKNIANIQIMRLVKRLEEKDYQLELQESALELISQAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|15836983|ref|NP_297671.1| ATP-dependent Clp protease subunit [Xylella fastidiosa 9a5c]
gi|54035911|sp|Q9PGC1.1|CLPB_XYLFA RecName: Full=Chaperone protein ClpB
gi|9105213|gb|AAF83191.1|AE003889_8 ATP-dependent Clp protease subunit [Xylella fastidiosa 9a5c]
Length = 861
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/717 (59%), Positives = 567/717 (79%), Gaps = 16/717 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L +++ N+ +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL ++++I L+ +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLADLERDIEVLDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG L LE+ L
Sbjct: 455 FSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLV 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+KLL +E L +
Sbjct: 515 AASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDKLLRMEADLGR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVVGQEEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII----KLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D + K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMEVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L + AL+ + N
Sbjct: 749 QAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLQGLEKRLAESELKLDLDDRALELLGN 808
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTLRMVYS 720
+GFD +YGAR + K+++ L+ + A GD + G +D ++V++
Sbjct: 809 VGFDPVYGARPL---KRAIQSQLENPLAQQILAEAFVSGDTVQVG---VDGGKLVFA 859
>gi|110833340|ref|YP_692199.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
borkumensis SK2]
gi|110646451|emb|CAL15927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
borkumensis SK2]
Length = 865
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/666 (61%), Positives = 546/666 (81%), Gaps = 9/666 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT++LTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LDKYTVNLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L E++ + II+FIDEL
Sbjct: 221 QRIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERLKAVLNELAKQEGRIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+RYI+DR +PDKAIDLIDEA ++
Sbjct: 341 PTVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHRYITDRQLPDKAIDLIDEAGSR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDS PE MD+L+RRLIQLK+E EA+++E D++S+KRL ++ EI++LE +YA+LE+
Sbjct: 401 IRMEIDSMPEEMDRLDRRLIQLKMEREALRKEDDDASRKRLEKLEDEIDELEKEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ + + K E+E+ R+++ +A R D +S+L+YGE+ +LE+ +++ ++
Sbjct: 461 IWQAEKAALQGAAEYKAELEQARVELEQARRAGDLSRMSELQYGEIPELEKKVQDAQDRE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q LL+ KV EEIAE+V++ TGIPVSK+++ E++KLL +E+ L RVVGQ+
Sbjct: 521 EQAQTETQ---LLRNKVTDEEIAEVVAKWTGIPVSKMLEGEKDKLLRMEDALHDRVVGQN 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+++RIDM
Sbjct: 578 EAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALANFLFDTEEAMVRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE+VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 638 SEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKPYSVVLLDEVEKAHPDVFNILLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK------EIIKLAVMNEVKIYF 607
DDGRLTD +GRT++FRNT++VMTSNLGSD I+++ D E +K AVM V +F
Sbjct: 698 DDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGSDAESASDYETMKSAVMEVVGNHF 757
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+D+ +VF L + + IA+IQL L+ +L + M L++S AAL ++ + GFD
Sbjct: 758 RPEFLNRVDETVVFHPLAKDQLKGIASIQLGFLRKRLAEREMSLELSDAALDQLVDAGFD 817
Query: 668 LIYGAR 673
+YGAR
Sbjct: 818 PVYGAR 823
>gi|352105799|ref|ZP_08960963.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
HAL1]
gi|350598222|gb|EHA14345.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
HAL1]
Length = 859
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/662 (62%), Positives = 547/662 (82%), Gaps = 6/662 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LNKYTMDLTQRALDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +LKE+S + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERLKAVLKELSQEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYISDR +PDKAIDLIDEAA++
Sbjct: 341 PSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTRYISDRQLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE+SKKRL + +I++LE +YA+L++
Sbjct: 401 IRMELDSKPESMDRLDRRLIQLKMEREALKKETDEASKKRLEALSAQIHELEREYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK I+ + Q K ++E+ RL + +A R+ D +S+++YG++ LE+ + E + +
Sbjct: 461 IWKAEKASIQGAAQFKADLEQARLDLEQARRQGDLGRMSEIQYGKIPALEKKIAESGEGE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL++ V EEIAE+VSR TGIPVSK+++ ER+KLL +E L +RV+GQD
Sbjct: 521 A----DTSSHQLLRSNVTEEEIAEVVSRWTGIPVSKMLEGERDKLLRMEEALHERVIGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ EE+++RIDM
Sbjct: 577 EAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSLANFLFDTEEAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKIYFRPEF 611
+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M + D E++K VM V +FRPE
Sbjct: 697 EDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDSDYEVMKNLVMEVVGNHFRPEL 756
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L ++ I +IA IQL LK +L + ++ L++S A+ +++ +GFD +YG
Sbjct: 757 INRIDEVVVFHALGQEQIQAIAGIQLERLKLRLAEHDLKLEVSPEAMAQLAVVGFDPVYG 816
Query: 672 AR 673
AR
Sbjct: 817 AR 818
>gi|452746805|ref|ZP_21946615.1| ClpB protein [Pseudomonas stutzeri NF13]
gi|452009282|gb|EME01505.1| ClpB protein [Pseudomonas stutzeri NF13]
Length = 854
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDPDAQRAAVMDAVAHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA+IQL L+ +L + + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAERELSLELSQEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|410631289|ref|ZP_11341966.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
arctica BSs20135]
gi|410149112|dbj|GAC18833.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
arctica BSs20135]
Length = 856
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/701 (60%), Positives = 556/701 (79%), Gaps = 15/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LDKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLNELSKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE MDKLERR+IQLK+E +A+ +E DE+S KRL +I+ E + E K++ EK
Sbjct: 401 IRLQMDSKPEDMDKLERRIIQLKLEEQALAKEKDEASHKRLEIIELEREQAEHKFSEFEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK ++ +Q I+ E+E+ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWVAEKQAMQGTQTIRSELEQAKLDLEIARRASDLSRMSELQYGRIPELEAKLELATESE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + TLLK KV EIA+++SR TGIPVSK+++ E+ KLL++E L KRVVGQ
Sbjct: 521 TQ------ETTLLKNKVTESEIADVLSRWTGIPVSKMLEGEKAKLLSMEKALHKRVVGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+ E+++IRIDM
Sbjct: 575 EAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAGFLFDTEDAMIRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++R++GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 635 SEFMEKHSVARMVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E+ + + + +K VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEVSGESNYQQMKSLVMTAVNDHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DDI+VF L ++ I +IA IQL LK +L L++S AAL+KI++ GFD +YGA
Sbjct: 755 NRVDDIVVFHPLGKEQITAIAKIQLRSLKERLADKGYKLELSPAALEKIADAGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
R + K+++ + ++P A I GDL G +D
Sbjct: 815 RPL---KRAIQTEI-----ENPLAQKILSGDLAKDGTIKID 847
>gi|119476932|ref|ZP_01617213.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2143]
gi|119449739|gb|EAW30976.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2143]
Length = 860
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/667 (63%), Positives = 552/667 (82%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALDKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKDKRVLSLDLGSLLAGAKFRGEFEERLKAVLNELSKQEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRQYLEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YE+HHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEIHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I++EIDSKPE MD+LERRLIQLKIE EA+K++ D ++KK+L+++ +I K E +
Sbjct: 395 DEAGSRIRMEIDSKPESMDRLERRLIQLKIEREAVKKDTDSAAKKQLVILDNDILKSEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK++++ SQQ K E+EK R+ + A R D +S+L+YG + LE+ ++
Sbjct: 455 YADLEEVWMAEKSILQGSQQTKSELEKARMDLEAAHRAGDLTRMSELQYGVIPGLEKTME 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ + + TLL+ KV EE+AE+VS+ TGIPVSK+++ ER+KLL +E L K
Sbjct: 515 TASQAETV------EMTLLRNKVTEEEVAEVVSKWTGIPVSKMLEGERDKLLRMEESLQK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ +VSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++E++
Sbjct: 569 RVIGQSEAVISVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAMFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+++ E+ + E +K +VM V +
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQQLSEEKNYEAMKRSVMEVVGGH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L+++ I IA IQ+++L+++L + L++S AA+ K++N+GF
Sbjct: 749 FRPEFINRIDETVVFHPLDQQQIRGIAAIQIDLLRSRLRDRELGLELSSAAIDKLANVGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|422649153|ref|ZP_16712263.1| clpB protein [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330962677|gb|EGH62937.1| clpB protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 854
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/666 (63%), Positives = 543/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++ KRL ++ EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDDAAIKRLEKLQDEIVRLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E LL K
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRMETLLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + L +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLTERELTLVLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|422406178|ref|ZP_16483211.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330881337|gb|EGH15486.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 855
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/667 (63%), Positives = 544/667 (81%), Gaps = 8/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIG-EPGVGKT 66
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG EPGVGKT
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGGEPGVGKT 214
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + I
Sbjct: 215 AIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQI 274
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRF
Sbjct: 275 ILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRF 334
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDL
Sbjct: 335 QKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDL 394
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++E+ +LE
Sbjct: 395 IDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEVVRLEK 454
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L
Sbjct: 455 EYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSL 514
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 QMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLH 568
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE
Sbjct: 569 NRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEE 628
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVF
Sbjct: 629 AMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVF 688
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
NILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +
Sbjct: 689 NILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTH 747
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID++++F L R I I +IQL L+ +L + + L +S AL K+ +G+
Sbjct: 748 FRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALTLSPEALDKLIAVGY 807
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 808 DPVYGAR 814
>gi|398948515|ref|ZP_10672836.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM33]
gi|398160568|gb|EJM48835.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM33]
Length = 854
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIARHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|392419721|ref|YP_006456325.1| ClpB protein [Pseudomonas stutzeri CCUG 29243]
gi|390981909|gb|AFM31902.1| ClpB protein [Pseudomonas stutzeri CCUG 29243]
Length = 854
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDPDAQRAAVMDAVAHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA+IQL L+ +L + + L++S+ A+ K+ IG+D
Sbjct: 748 RPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAERELSLELSQEAMDKLIAIGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|426411549|ref|YP_007031648.1| chaperone ClpB [Pseudomonas sp. UW4]
gi|426269766|gb|AFY21843.1| chaperone ClpB [Pseudomonas sp. UW4]
Length = 854
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIARHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|335425025|ref|ZP_08554016.1| ATP-dependent chaperone ClpB [Salinisphaera shabanensis E1L3A]
gi|334886701|gb|EGM25048.1| ATP-dependent chaperone ClpB [Salinisphaera shabanensis E1L3A]
Length = 861
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/698 (61%), Positives = 557/698 (79%), Gaps = 12/698 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE G L KYTIDLTE+A GKLDPVIGRD+EIRR IQVL RR+KNNP L+GEPGVGKTA
Sbjct: 153 EEQRGALDKYTIDLTERAEQGKLDPVIGRDEEIRRVIQVLSRRTKNNPTLVGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP SL K++L+LD+ ++AG KYRGEFEDRLK +L ++S + II
Sbjct: 213 IVEGLAQRIINGEVPESLRDKRVLVLDLGGMIAGAKYRGEFEDRLKGVLSDLSKQEGRII 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK EGS+DAGNMLKP L+RGELHCIGATTLNEYR+ IEKDAA ERRFQ
Sbjct: 273 LFIDEIHTLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLNEYRENIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K++V+EPD+E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 333 KVIVDEPDLEDTIAILRGLKERYEVHHGVDITDGAIIAAAKLSQRYITDRKLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+KI+IEIDSKPE +D+L+RRLIQLKIE +A+ +E DE SK RL + +EIN+LE +
Sbjct: 393 DEAASKIRIEIDSKPEELDRLDRRLIQLKIEKQALSKESDEGSKTRLDRLDEEINELERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK + + +EE+E+ + ++ A R D+ +S+L+YG + +LER L
Sbjct: 453 YSDLEEIWKSEKASVAGAANKREELEQAKKELEAAQRARDFDRMSELQYGRIPQLERELA 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +Q Q P A K LL+ V EE+AEIVSR TGIPV+++++ ER+KLL +E+ L +
Sbjct: 513 E-AQAAEQTP-AATK--LLRNNVTDEEVAEIVSRWTGIPVNRMLEAERDKLLRMEDSLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+SAVS+AIRRSRSGLSD RP GSF+FLGPTGVGKTELCK+++ +F+ E +
Sbjct: 569 RVIGQNEAVSAVSDAIRRSRSGLSDPNRPIGSFLFLGPTGVGKTELCKSIATFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+E+ + ++ +VM V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQELSDTSYDTMRESVMEVVAQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + I IA IQ+ L +L + + L IS AA+ K++ GFD
Sbjct: 749 RPEFINRIDESVVFHPLAQAQIREIARIQMRELHTRLAERELTLDISNAAVDKLAEAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
+YGAR + K+S+ L+ ++P A I G+ +
Sbjct: 809 PVYGARPL---KRSIQTLV-----ENPLAKRILAGEFV 838
>gi|258545487|ref|ZP_05705721.1| chaperone protein ClpB [Cardiobacterium hominis ATCC 15826]
gi|258519187|gb|EEV88046.1| chaperone protein ClpB [Cardiobacterium hominis ATCC 15826]
Length = 856
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/692 (60%), Positives = 569/692 (82%), Gaps = 13/692 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTID+T +A GK+DPVIGRD+EIRRA+Q+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTIDVTARAEQGKIDPVIGRDEEIRRAMQILQRRNKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL K++L LD+A LLAGTKYRGEFE+RLK +L +I II+FIDE+
Sbjct: 219 QRIVNGEVPESLKGKRLLSLDLAALLAGTKYRGEFEERLKAVLTDIEKANGQIILFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYRQY+EKDAA ERRFQK++VEE
Sbjct: 279 HTMVGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEYRQYMEKDAALERRFQKVMVEE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ++YEVHHG++ITDPA+VAA+ LS RYI++R +PDKAIDLIDEAAA+
Sbjct: 339 PTVEDTIAILRGLQERYEVHHGIDITDPALVAAAVLSNRYITNRQLPDKAIDLIDEAAAQ 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKPE MD+++RRLIQLK+E A+++E+D++SKKRL ++ EI+KLE +YA+LE+
Sbjct: 399 IRMELDSKPETMDRIDRRLIQLKMERLALEKEHDDASKKRLADLQDEIDKLEKEYADLEE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W+ EK I+ S IKEEI+++R+++ A R+ D+ +S+++YG++ LE+ L S+
Sbjct: 459 VWQAEKATIQGSAGIKEEIDRLRVELEAAKRRGDYAAMSEIQYGKIPALEKQLAH-SETA 517
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
P + TL++++V EEIA+IVSR TGIPV+K+++ E+EKLL +E+ L RVVGQ+
Sbjct: 518 AAKPQH----TLVRSEVTEEEIAQIVSRWTGIPVAKMLESEKEKLLALESALGARVVGQE 573
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
A+ AV+NAIRR+R+GLSD RP GSF+FLGPTGVGKTELC+TL+A +F+++E+++RIDM
Sbjct: 574 TAVEAVANAIRRNRAGLSDPNRPIGSFLFLGPTGVGKTELCRTLAAFLFDSDEAMVRIDM 633
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GY++GGYLTE VRR+PYS++L DEIEKA++DVFN+LLQ+L
Sbjct: 634 SEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRRPYSVVLFDEIEKAHADVFNVLLQVL 693
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+I+MTSNLGS I+EM D E +KLAVM V +FRPEFIN
Sbjct: 694 DDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQEMNYDDYEAMKLAVMEIVSAHFRPEFIN 753
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L ++++ IA IQL L+ +L + + L+IS AAL ++ +G+D ++GAR
Sbjct: 754 RIDETVVFHALGKEHMQGIATIQLARLRKRLAERELGLEISPAALAQLVEVGYDPVFGAR 813
Query: 674 DVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
+ K+++ + H ++P A I GD +
Sbjct: 814 PL---KRAI-----QTHLENPLAQRILAGDFL 837
>gi|398944095|ref|ZP_10671062.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM41(2012)]
gi|398158504|gb|EJM46848.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM41(2012)]
Length = 854
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIVRHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNAEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVDQ------HGKTENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|289661674|ref|ZP_06483255.1| ATP-dependent Clp protease [Xanthomonas campestris pv. vasculorum
NCPPB 702]
gi|289667092|ref|ZP_06488167.1| ATP-dependent Clp protease [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 861
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/673 (62%), Positives = 548/673 (81%), Gaps = 16/673 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 455 FSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 510
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 511 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 567 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA++DV
Sbjct: 627 EAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-----IKLAVM 600
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ GD +K AVM
Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SGDGSAEAYTQMKAAVM 745
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF LN+ I SIA IQL+ L+ +L + + L + AAL+
Sbjct: 746 GVVQAHFRPEFINRLDDIVVFHPLNKAQIKSIARIQLHGLEKRLAERGLKLDLDDAALEL 805
Query: 661 ISNIGFDLIYGAR 673
+ N+GFD +YGAR
Sbjct: 806 LGNVGFDPVYGAR 818
>gi|254230259|ref|ZP_04923650.1| chaperone ClpB [Vibrio sp. Ex25]
gi|262395161|ref|YP_003287015.1| ClpB protein [Vibrio sp. Ex25]
gi|451977393|ref|ZP_21927478.1| chaperone ClpB [Vibrio alginolyticus E0666]
gi|151937239|gb|EDN56106.1| chaperone ClpB [Vibrio sp. Ex25]
gi|262338755|gb|ACY52550.1| ClpB protein [Vibrio sp. Ex25]
gi|451929725|gb|EMD77457.1| chaperone ClpB [Vibrio alginolyticus E0666]
Length = 857
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 543/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + +E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLKALNEELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L RVVGQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHNRVVGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+S VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVSVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYQGIKSEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+I+VF L +++I SIA+IQL L +L + L++S AL I+ +GFD +YGA
Sbjct: 755 NRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|359781834|ref|ZP_09285057.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
psychrotolerans L19]
gi|359370204|gb|EHK70772.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
psychrotolerans L19]
Length = 854
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/660 (62%), Positives = 545/660 (82%), Gaps = 7/660 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L K+T+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LDKFTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E++ + II+FIDEL
Sbjct: 221 QRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKGVLNELAKQEGRIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE +D+L+RRLIQLK+E +A+K+E DE+++KRL + ++I +LE +YA+LE+
Sbjct: 401 IRMEIDSKPEALDRLDRRLIQLKVERQALKKEEDEAARKRLEKLDEDIARLEQEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK ++DS Q+++ IE+ R ++ A RK D +++L+YG + LER L+ Q
Sbjct: 461 VWKAEKAEVQDSAQLQQRIEQARTELEAARRKGDLNRMAELQYGTIPDLERSLQMVDQH- 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ P N LL+ KV +EIAE+VS+ TGIPVSK+++ ER+KLL +E L RV+GQD
Sbjct: 520 -EKPAN----QLLRNKVTEDEIAEVVSKWTGIPVSKMLEGERDKLLRMEEALHNRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ E++++RIDM
Sbjct: 575 EAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKSLAEFLFDTEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD++GRT++FRN +IVMTSNLGS +I+E+ GD + + AVM+ V +FRPEFIN
Sbjct: 695 DDGRLTDSQGRTVDFRNAVIVMTSNLGSAQIQEL-VGDPDAQRAAVMDAVASHFRPEFIN 753
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L R+ I IA IQL L+ +L + ++ L++S AL K+ +G+D +YGAR
Sbjct: 754 RIDEVVVFEPLGREQIAGIAEIQLQHLRQRLAERDLQLELSPEALDKLVAVGYDPVYGAR 813
>gi|451822903|ref|YP_007459177.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775703|gb|AGF46744.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 865
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/671 (63%), Positives = 545/671 (81%), Gaps = 7/671 (1%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DE + L KYT DLT KA GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKT
Sbjct: 153 DELNRNSLAKYTTDLTAKASSGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKT 212
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLAQRI+N EVP++L KK+L LD+A L+AG K+RGEFE+RLK +LKE+S + +
Sbjct: 213 AIVEGLAQRIVNSEVPDNLKGKKVLSLDMASLVAGAKFRGEFEERLKSVLKELSLDSGNN 272
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
IIFIDELHT++G GK EGS+DAGNMLKP L+RG+LHCIGATTL+EYR+YIEKDAA ERRF
Sbjct: 273 IIFIDELHTIMGAGKAEGSMDAGNMLKPALARGDLHCIGATTLDEYRKYIEKDAALERRF 332
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QK+LV+EPD+E TI+ILRGL+++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDL
Sbjct: 333 QKVLVDEPDVESTIAILRGLRERYEIHHGIQITDPAIVAAAELSNRYITDRFLPDKAIDL 392
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEA ++I++EIDSKPE+MDKL+RR+IQLKIE EA+KRE DESSKKRL I++E+ KL+
Sbjct: 393 IDEAGSRIRMEIDSKPEVMDKLDRRIIQLKIEREAVKRETDESSKKRLSFIEEELAKLQR 452
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+Y + E IWK EK ++ +Q IKEEI+ ++ K+ + R + +++++Y L LE L
Sbjct: 453 EYGDYEDIWKSEKAAVQGTQAIKEEIDNLKAKMAELQRTGQYDKLAEIQYAVLPSLELRL 512
Query: 367 KEKSQKDIQLPNNAN----KFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIE 422
K + L NN N KF LL+ +VG+EEIAE+VSR TGIPVSK+++ EREKLL++
Sbjct: 513 K---ASEAGLENNHNSEERKFKLLRIQVGAEEIAEVVSRATGIPVSKMMKGEREKLLHLN 569
Query: 423 NLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIF 482
+ L RVVGQ+EA+ AVS+AI RSR+GLSD+ RP GSF+FLGPTGVGKTEL + L+ +F
Sbjct: 570 DFLSSRVVGQNEAVQAVSDAILRSRAGLSDSARPSGSFLFLGPTGVGKTELARALTEFMF 629
Query: 483 NNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKAN 542
++ + IIR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY +ILLDEIEKA+
Sbjct: 630 DSSDHIIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVILLDEIEKAH 689
Query: 543 SDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNE 602
DVFNILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGS +I+ M + E ++ V+ +
Sbjct: 690 PDVFNILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSSEIQNMHEKTYEDVREVVLEK 749
Query: 603 VKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKIS 662
+K RPEF+NRIDDI+VF L RK++ SI IQL LK ++ M + +S A+ ++S
Sbjct: 750 LKQVLRPEFLNRIDDIVVFHNLERKHMNSIVRIQLERLKYRIENKGMYINLSDEAISELS 809
Query: 663 NIGFDLIYGAR 673
N+GFD +GAR
Sbjct: 810 NVGFDHQFGAR 820
>gi|430761748|ref|YP_007217605.1| ClpB protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430011372|gb|AGA34124.1| ClpB protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 857
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/662 (62%), Positives = 552/662 (83%), Gaps = 9/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+A GKLDPVIGRDDEIRRA+QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTERAEQGKLDPVIGRDDEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ LLAG KYRG+FE+RLK +LK+++ + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKDKRVLALDLGALLAGAKYRGDFEERLKSVLKDLAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YEVHHG+EITDPAIVAA++LS RYI+DR +PDKAIDL+DEA+++
Sbjct: 341 PTLEDTIAILRGLKERYEVHHGIEITDPAIVAAAQLSQRYITDRQLPDKAIDLVDEASSR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL ++ EI +LE +Y++LE+
Sbjct: 401 IRMEIDSKPEEMDRLDRRLIQLKIEREAMKKETDEASRKRLDALEDEIERLEREYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + QIKE++E+ R+++ A R D +S+L+YG + +L++ L++ ++ +
Sbjct: 461 IWKSEKAAVTGAAQIKEDLERARMELETARRAGDLNRMSELQYGRIPELQKALEQAAELE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL+ KV EE+AE+VSR TGIPVSK+++ E++KLL +E + +RVVGQD
Sbjct: 521 TR------ETRLLRNKVTDEEVAEVVSRWTGIPVSKMLEGEKDKLLRMEEAVGQRVVGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NAIRR+R+GLSD RP GSF+FLGPTGVGKTEL K L+A +F+ E++++RIDM
Sbjct: 575 EAVRAVANAIRRARAGLSDPNRPSGSFLFLGPTGVGKTELTKALAAFLFDTEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++R+IGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 635 SEFMEKHSVARMIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKIYFRPEF 611
DDGRLTD GRT++FRNT+IVMTSNLGS I+EM G++ +K AVM V +FRPEF
Sbjct: 695 DDGRLTDGHGRTVDFRNTVIVMTSNLGSQLIQEM-AGEEHYAQMKAAVMEVVGSHFRPEF 753
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INR+DD++VF L R+ I +I +IQL +L+ +L + ++ ++S+AAL ++ GFD +YG
Sbjct: 754 INRVDDVVVFHPLGREQIRAITDIQLRLLRQRLAERDIAFEVSEAALDRLGEAGFDPVYG 813
Query: 672 AR 673
AR
Sbjct: 814 AR 815
>gi|91227643|ref|ZP_01261920.1| ClpB protein [Vibrio alginolyticus 12G01]
gi|269966581|ref|ZP_06180662.1| clpB protein [Vibrio alginolyticus 40B]
gi|91188422|gb|EAS74716.1| ClpB protein [Vibrio alginolyticus 12G01]
gi|269828766|gb|EEZ83019.1| clpB protein [Vibrio alginolyticus 40B]
Length = 857
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 543/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + +E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLKALNEELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L RVVGQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHNRVVGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+S VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVSVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYQGIKSEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+I+VF L +++I SIA+IQL L +L + L++S AL I+ +GFD +YGA
Sbjct: 755 NRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|387769285|ref|ZP_10125549.1| ATP-dependent chaperone protein ClpB [Pasteurella bettyae CCUG
2042]
gi|386906918|gb|EIJ71639.1| ATP-dependent chaperone protein ClpB [Pasteurella bettyae CCUG
2042]
Length = 856
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/706 (59%), Positives = 562/706 (79%), Gaps = 14/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +LKE++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERLKAVLKELAQEEGKVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+K+E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALKKEEDEASRKRLTMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA L++IWK EK + +Q IK E+E VR+++ +A R D +S+L+YG + LE+ L
Sbjct: 455 YAELDEIWKSEKATLSGTQHIKAELENVRMQMEQARRAGDLNKMSELQYGVIPTLEKQLS 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ ++ + + TLL+ +V EEIAE++SR TGIPVS++++ E+EKLL +E+ L K
Sbjct: 515 DANKAE------GKEMTLLRNRVTDEEIAEVLSRATGIPVSRMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQGEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDDEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNQDLGYDGMKELVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI SIA IQL L ++ + D+ S A L IS +G+D
Sbjct: 749 RPEFINRIDETVVFHPLAKENIKSIAQIQLARLIKRMAEHGYDIHFSDATLDFISEVGYD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
IYGAR + K+++ + ++P A I G L+ P ++D
Sbjct: 809 PIYGARPL---KRAIQQEI-----ENPLAQQILSGKLLPASPVTVD 846
>gi|254427099|ref|ZP_05040806.1| ATPase, AAA family [Alcanivorax sp. DG881]
gi|196193268|gb|EDX88227.1| ATPase, AAA family [Alcanivorax sp. DG881]
Length = 863
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/666 (61%), Positives = 544/666 (81%), Gaps = 9/666 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT++LTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LDKYTVNLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L E+ + II+FIDEL
Sbjct: 219 QRIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERLKAVLNELGKQEGRIILFIDEL 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 279 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+RYI+DR +PDKAIDLIDEA ++
Sbjct: 339 PTVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHRYITDRQLPDKAIDLIDEAGSR 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDS PE MD+L+RRLIQLK+E EA+++E D++S+KRL +++EI++LE +YA+LE+
Sbjct: 399 IRMEIDSMPEEMDRLDRRLIQLKMEREALRKEEDDASRKRLEKLEEEIDELEKQYADLEE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ + + K E+E+ R+++ +A R D +S+L+YG++ +LE+ +++ ++
Sbjct: 459 IWQAEKAALQGAAEYKAELEQARVEMEQARRAGDLSRMSELQYGQIPELEKKVQDAQDRE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q LL+ KV EEIAE+V++ TGIPVSK+++ E++KLL +E L RVVGQD
Sbjct: 519 EQAQAETQ---LLRNKVTDEEIAEVVAKWTGIPVSKMLEGEKDKLLRMEEALHDRVVGQD 575
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+++RIDM
Sbjct: 576 EAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALANFLFDTEEAMVRIDM 635
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE+VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 636 SEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKPYSVVLLDEVEKAHPDVFNILLQVL 695
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK------EIIKLAVMNEVKIYF 607
DDGRLTD +GRT++FRNT++VMTSNLGSD I+++ D E +K AVM V +F
Sbjct: 696 DDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGADAQSGSDYEAMKSAVMEVVGSHF 755
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D+ +VF L + + IA+IQL L+ +L + ++ L +S AL K+ + GFD
Sbjct: 756 RPEFINRVDETVVFHPLAKDQLKGIASIQLGFLQKRLAERDIGLALSNEALDKLVDAGFD 815
Query: 668 LIYGAR 673
+YGAR
Sbjct: 816 PVYGAR 821
>gi|28897335|ref|NP_796940.1| ClpB protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153839763|ref|ZP_01992430.1| chaperone ClpB [Vibrio parahaemolyticus AQ3810]
gi|260364016|ref|ZP_05776747.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
K5030]
gi|260876298|ref|ZP_05888653.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
AN-5034]
gi|260895105|ref|ZP_05903601.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
Peru-466]
gi|417321417|ref|ZP_12107957.1| ClpB protein [Vibrio parahaemolyticus 10329]
gi|433656841|ref|YP_007274220.1| ClpB protein [Vibrio parahaemolyticus BB22OP]
gi|54035833|sp|Q87S63.1|CLPB_VIBPA RecName: Full=Chaperone protein ClpB
gi|28805544|dbj|BAC58824.1| ClpB protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149746716|gb|EDM57704.1| chaperone ClpB [Vibrio parahaemolyticus AQ3810]
gi|308088902|gb|EFO38597.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
Peru-466]
gi|308092911|gb|EFO42606.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
AN-5034]
gi|308115632|gb|EFO53172.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
K5030]
gi|328472097|gb|EGF42974.1| ClpB protein [Vibrio parahaemolyticus 10329]
gi|432507529|gb|AGB09046.1| ClpB protein [Vibrio parahaemolyticus BB22OP]
Length = 857
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLQALNDELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L RVVGQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHNRVVGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++ VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYQGIKSEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+I+VF L +++I SIA+IQL L +L + L++S AL I+ +GFD +YGA
Sbjct: 755 NRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|398883912|ref|ZP_10638859.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM60]
gi|398195738|gb|EJM82767.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM60]
Length = 854
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIKRLEKLQEEIVRHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMEGLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398876531|ref|ZP_10631686.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM67]
gi|398204297|gb|EJM91101.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM67]
Length = 854
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIKRLEKLQEEIVRHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMEGLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|121999011|ref|YP_001003798.1| ATPase [Halorhodospira halophila SL1]
gi|121590416|gb|ABM62996.1| ATPase AAA-2 domain protein [Halorhodospira halophila SL1]
Length = 870
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/669 (63%), Positives = 547/669 (81%), Gaps = 9/669 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPG GKTA
Sbjct: 156 EEQRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGTGKTA 215
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP L +K++L LD+ LLAG KYRG+FE+RLK +LKE+ + II
Sbjct: 216 IVEGLAQRIVNAEVPEGLKNKRVLSLDLGALLAGAKYRGDFEERLKALLKELGQQEGQII 275
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK EG++DAGNMLKP L+RGELHCIGATTLNEYR+ IEKDAA ERRFQ
Sbjct: 276 LFIDELHTIVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEYRENIEKDAALERRFQ 335
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
+LV+EP +E+T++ILRGL+++YEVHHGVEITDPAIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 336 TVLVDEPSVEDTVAILRGLKERYEVHHGVEITDPAIVSAATLSHRYITDRNLPDKAIDLV 395
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K E D++S+KRL ++ EI++LE +
Sbjct: 396 DEAASRIRMEIDSKPESMDRLERRLIQLKIEREALKNENDDASRKRLATLEDEISELEQE 455
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IW EK ++ +Q IKEE+E+ R ++ A R D Q +S+L+YG + +LER L
Sbjct: 456 YQSLEEIWNSEKAAVEGTQSIKEELERARQEVETARRAGDLQRMSELQYGRIPELERQLD 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q D+ LL+ +V EE+AE+VS+ TGIPVSK+++ ER+KLL +E L +
Sbjct: 516 MAAQADM------YDMKLLRNRVTEEEVAEVVSKWTGIPVSKMLEGERDKLLRMEEALHE 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEAI AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +E+
Sbjct: 570 RVVGQDEAIGAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDTQEA 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA++DVFN
Sbjct: 630 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEHVRRKPYSVILLDEVEKAHADVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI---IKLAVMNEVK 604
+LLQ+LDDGRLTD+ GRT++FRNT+IVMTSNLGS+ I+ M ++E +K +VM+ V
Sbjct: 690 VLLQVLDDGRLTDSHGRTVDFRNTVIVMTSNLGSEVIQTMAGEEEESYQRMKSSVMDIVG 749
Query: 605 IYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNI 664
FRPEFINRID+++VFR L+R+ I +I +IQ+ L +L + +M L++S+ AL +I
Sbjct: 750 TQFRPEFINRIDEVVVFRPLSREQIRAITSIQVRYLSERLAERDMALELSEVALDRIGEA 809
Query: 665 GFDLIYGAR 673
GFD +YGAR
Sbjct: 810 GFDPVYGAR 818
>gi|326796211|ref|YP_004314031.1| ATP-dependent chaperone ClpB [Marinomonas mediterranea MMB-1]
gi|326546975|gb|ADZ92195.1| ATP-dependent chaperone ClpB [Marinomonas mediterranea MMB-1]
Length = 861
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/672 (61%), Positives = 551/672 (81%), Gaps = 15/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLTE+A G+LDPVIGRDDEIRR +QVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTERAAEGRLDPVIGRDDEIRRTVQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKSEGSMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP + ++I+ILRGL+++YEVHHGV+ITDPAI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPTVLDSIAILRGLKERYEVHHGVDITDPAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D SSK+RL ++ EI +L+ +
Sbjct: 395 DEAASRIRMEMDSKPENLDRLERRLIQLKIEKEALKKETDRSSKQRLKELESEIERLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE---- 363
Y++LE+IW EK ++ +Q++KEE+E+V+ ++ +A R+ + +S+L+YG + LE
Sbjct: 455 YSDLEEIWNAEKAQVQGAQKLKEELEQVKQEMEEARRQGNLAKMSELQYGVIPMLEAEIE 514
Query: 364 -RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIE 422
L E+ +++ Q LLK +V EEIA +VSR TGIPV K+++ EREKLL +E
Sbjct: 515 KATLAEEGEQETQ---------LLKNRVTEEEIATVVSRWTGIPVDKMLEGEREKLLRME 565
Query: 423 NLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIF 482
++L + V+GQDEA++AVSNA+RRSRSGL+D KRP GSF+FLGPTGVGKTELCK+L+ +F
Sbjct: 566 DVLHESVIGQDEAVNAVSNAVRRSRSGLADPKRPNGSFLFLGPTGVGKTELCKSLAKFLF 625
Query: 483 NNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKAN 542
+ E++++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDEIEKA+
Sbjct: 626 DTEQAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEIEKAH 685
Query: 543 SDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMN 601
DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGSD I+E + D+ E IK V++
Sbjct: 686 PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQEYQTDDQYEEIKSKVLD 745
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V FRPEFINRID+ +VF L ++ I IA IQL+ L +L +M M L +S +A+ ++
Sbjct: 746 VVGTQFRPEFINRIDETVVFHPLRKEQIAGIAKIQLSHLNERLEEMGMALTLSDSAMSQL 805
Query: 662 SNIGFDLIYGAR 673
+ +G+D +YGAR
Sbjct: 806 AEVGYDPVYGAR 817
>gi|386817480|ref|ZP_10104698.1| ATP-dependent chaperone ClpB [Thiothrix nivea DSM 5205]
gi|386422056|gb|EIJ35891.1| ATP-dependent chaperone ClpB [Thiothrix nivea DSM 5205]
Length = 870
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/667 (62%), Positives = 555/667 (83%), Gaps = 5/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L+KYTIDLTE+A GK+DP+IGRD+EIRR +Q+LQRR+KNNPVLIGEPGVGKTA
Sbjct: 156 EDQRQALEKYTIDLTERAEQGKIDPIIGRDEEIRRMVQILQRRTKNNPVLIGEPGVGKTA 215
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
+VEGLAQRI+NGEVP + K++L LD+ LLAG+KYRG+FE+RLK +L +I+ ++ ++I
Sbjct: 216 LVEGLAQRIVNGEVPEGVKGKRLLSLDLGALLAGSKYRGDFEERLKAVLTDIAKSEGNVI 275
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 276 LFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 335
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGLQ+KYEVHHGV+ITDPA+VAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 336 KVLVDEPSVEDTIAILRGLQEKYEVHHGVDITDPALVAAATLSHRYITDRQLPDKAIDLI 395
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +DKLERRLIQLKIE EA+K+E DE+SKKRL ++ EI++LE+
Sbjct: 396 DEAASRIRLEIDSKPEALDKLERRLIQLKIEREALKKESDEASKKRLADLQAEIDRLELD 455
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE++WK EK ++ + IKE +++ RL+ + A R + Q +++L+YG++ +LE+ L
Sbjct: 456 YSDLEEVWKGEKAAMQGTTHIKEALDQARLEFDTAKRAGNLQRMAELQYGKIPELEQQL- 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D + N+ + LLK KV EEIA+IVSR TGIPVSK+++ E+EKLL +E++L K
Sbjct: 515 --AAADAAV-NSQQETKLLKNKVTDEEIADIVSRWTGIPVSKMLESEKEKLLQMEDVLGK 571
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNAIRR+R+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+ +++
Sbjct: 572 RVIGQREAVVAVSNAIRRARAGLSDPNRPSGSFLFLGPTGVGKTELTKALAKFLFDTDDA 631
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 632 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 691
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS I+EM + E +K AVM V +
Sbjct: 692 VLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQEMTGEENYERMKAAVMEVVGTH 751
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L++ I IA+IQLN L+ +L ++ + +++AAL I+ GF
Sbjct: 752 FRPEFINRIDETVVFHPLDQAEIRQIADIQLNNLRKRLAARDLGISVTEAALDHIAEAGF 811
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 812 DPVYGAR 818
>gi|339000201|ref|ZP_08638818.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
TD01]
gi|338762897|gb|EGP17912.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
TD01]
Length = 859
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/662 (62%), Positives = 546/662 (82%), Gaps = 6/662 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LNKYTMDLTQRALDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +LKE+S + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKEKRVLSLDMGSLLAGAKFRGEFEERLKAVLKELSQEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYISDR +PDKAIDLIDEAA++
Sbjct: 341 PSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTRYISDRQLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE++KKRL + +I++LE +YA+L++
Sbjct: 401 IRMELDSKPEEMDRLDRRLIQLKMEREALKKETDEATKKRLEALNNQIHELEREYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK I+ + Q K E+E+ R+ + +A R+ D +S+++YG++ LE+ + E + +
Sbjct: 461 IWKAEKASIQGAAQFKAELEQARIDLEQARRQGDLGRMSEIQYGKIPALEKKISEAGEGE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
++ LL++ V EEIAE+VSR TGIPVSK+++ ER+KLL +E L +RV+GQ
Sbjct: 521 ADTASH----QLLRSNVTEEEIAEVVSRWTGIPVSKMLEGERDKLLRMEEALHERVIGQH 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ EE+++RIDM
Sbjct: 577 EAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSLANFLFDTEEAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKIYFRPEF 611
+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M + D E++K AVM V +FRPE
Sbjct: 697 EDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDNDYEVMKNAVMEVVGNHFRPEL 756
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L ++ I +IA IQL LK +L + ++ L IS A+ +++ +GFD +YG
Sbjct: 757 INRIDEVVVFHALGQEQIQAIAGIQLERLKVRLAEHDLSLAISDDAMAQLAVVGFDPVYG 816
Query: 672 AR 673
AR
Sbjct: 817 AR 818
>gi|260903275|ref|ZP_05911670.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
AQ4037]
gi|308107960|gb|EFO45500.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
AQ4037]
Length = 823
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 127 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 187 QRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 247 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 307 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + E+N+ E +YA LE+
Sbjct: 367 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLQALNDELNEKEREYAELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 427 VWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L RVVGQ
Sbjct: 487 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHNRVVGQS 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++ VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 541 EAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYQGIKSEVMDVVSKHFRPEFL 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+I+VF L +++I SIA+IQL L +L + L++S AL I+ +GFD +YGA
Sbjct: 721 NRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|381157534|ref|ZP_09866768.1| ATP-dependent chaperone ClpB [Thiorhodovibrio sp. 970]
gi|380881397|gb|EIC23487.1| ATP-dependent chaperone ClpB [Thiorhodovibrio sp. 970]
Length = 867
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/668 (63%), Positives = 540/668 (80%), Gaps = 7/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KY+IDLTE+A GKLDPV+GRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYSIDLTERAEQGKLDPVVGRDDEIRRTIQVLARRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+A L+AG K+RGEFE+RLK +L +++ + +II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERLKAVLTDVARQEGNII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+Y+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGL+++YEVHH VEITDPAI+AA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVVEPSVEDTIAILRGLKERYEVHHAVEITDPAIIAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDS PE MDKL+RRLIQLKIE EA+K+E DE+SKKRL ++ EI +LE +
Sbjct: 395 DEAASHIRMEIDSMPEEMDKLDRRLIQLKIEREALKKESDEASKKRLDDLQGEITRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L +IW+ EK ++ + IKEE+++ R+++ A R D +S+L+YG + +LE+ L
Sbjct: 455 FSDLNEIWQSEKAAVQGTAHIKEELDRARVEMETARRAGDLTRMSELQYGRIPELEKRLT 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
S D N LL+ KV EEIA+IVS+ T IPVSK+++ EREKLL +E L +
Sbjct: 515 TASASDTDQSGN----KLLRNKVTEEEIADIVSKWTNIPVSKMLEGEREKLLRMEEALAR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+SAVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EES
Sbjct: 571 RVVGQQEAVSAVSDAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAQFLFDTEES 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDEIEKA+ DVFN
Sbjct: 631 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEIEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKI 605
+LLQ+LDDGRLTD +GRT++FRN+ IVMTSNLGSD I++ + G+ +K AVM ++
Sbjct: 691 VLLQVLDDGRLTDGQGRTVDFRNSAIVMTSNLGSDIIQQ-KAGEANYGEMKDAVMEILRH 749
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINR+D+I+VF L ++ I +IA IQL L+ +L + ++IS AAL + G
Sbjct: 750 AFRPEFINRLDEIVVFHPLGQEQIRAIARIQLEYLRARLASREIGMQISDAALDHLGEAG 809
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 810 FDPVYGAR 817
>gi|289209193|ref|YP_003461259.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sp. K90mix]
gi|288944824|gb|ADC72523.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sp. K90mix]
Length = 862
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/699 (61%), Positives = 560/699 (80%), Gaps = 10/699 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT DLTE+A GKLDPVIGRD+EIRR+IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTTDLTERAEQGKLDPVIGRDEEIRRSIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ LLAG KYRG+FE+RLK +LKE+S + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKDKRVLALDLGALLAGAKYRGDFEERLKSVLKELSQEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQ IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTLVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQNIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHG+EITDPAIVAA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPTLEDTIAILRGLKERYEVHHGIEITDPAIVAAAQLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE MD+LERRLIQLKIE EA+K+E D++SKKRL +++EI +LE +
Sbjct: 395 DEAASRIKMEIDSKPESMDRLERRLIQLKIEREALKKESDDASKKRLDTLQEEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE++WK EK + + Q+KEE+E+ R+++ A R D +S+L+YG + LE+ L
Sbjct: 455 YSDLEEVWKSEKASVSGAAQLKEELERARMELETARRAGDLSRMSELQYGRIPDLEKSLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + Q + LL+TKV EE+AE+VSR TGIPVSK+++ E++KLL +E +
Sbjct: 515 MAHEMESQ------ETKLLRTKVTDEEVAEVVSRWTGIPVSKMLEGEKDKLLRMEEAIGA 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTEL K L++ +F+ EE+
Sbjct: 569 RVVGQSEAVNAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELTKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGYIGYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYIGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD GRT++FRNT+IVMTSNLGS +I+EM + + +K AVM V +
Sbjct: 689 VLLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSQQIQEMAGEENYDAMKAAVMEIVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+DD++VF L R+ I +IA+IQL L+ +L + ++ + I+ AAL + GF
Sbjct: 749 FRPEFINRVDDVVVFHPLEREQIRAIADIQLQYLRKRLEERDLSITITDAALDHLGAAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ L+ +S A GD I
Sbjct: 809 DPVYGARPL---KRAIQTQLENPLAQSLLAGEFGPGDTI 844
>gi|325916266|ref|ZP_08178547.1| ATP-dependent chaperone ClpB [Xanthomonas vesicatoria ATCC 35937]
gi|325537560|gb|EGD09275.1| ATP-dependent chaperone ClpB [Xanthomonas vesicatoria ATCC 35937]
Length = 859
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/672 (62%), Positives = 547/672 (81%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 213 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 333 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 393 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLETDIDKLERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 453 FSDLNEVWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 508
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 509 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 564
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 565 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 624
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA++DV
Sbjct: 625 EAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADV 684
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 685 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 744
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL+ L+ +L + + L + AAL+ +
Sbjct: 745 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLHGLEKRLSERGLKLDLDDAALELL 804
Query: 662 SNIGFDLIYGAR 673
N+GFD +YGAR
Sbjct: 805 GNVGFDPVYGAR 816
>gi|407700657|ref|YP_006825444.1| ClpB protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407249804|gb|AFT78989.1| ClpB protein [Alteromonas macleodii str. 'Black Sea 11']
Length = 858
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/699 (59%), Positives = 562/699 (80%), Gaps = 18/699 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT DLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTTDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+F+DEL
Sbjct: 221 QRIINGEVPEGLKNKRVLALDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE MD+LERR+IQLK+E +A+ +E D++S KRL +I+ E + E KYA LEK
Sbjct: 401 IRLQIDSKPEEMDRLERRIIQLKLEEQALAKETDDASHKRLEMIELEREQAETKYAELEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK E+E+ +L + A R SD +S+L+YG + +LE L++ ++
Sbjct: 461 VWLDEKDAMQGTQTIKGELEQAKLDLEIARRASDLNRMSELQYGRIPELEAKLEQAAE-- 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
N + TLLK KV EIA+++SR TGIPV+++++ EREKLL +E++L KRVVGQ+
Sbjct: 519 ----NETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREKLLRMEDVLHKRVVGQE 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ E++++RIDM
Sbjct: 575 EAVQAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+++MTSNLGSD I++ + + +K +VM+ V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQDKHNESQYDDMKASVMSVVGQHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DDI+VF L ++ I SIA IQL L+ +L + L ++ AA+ K+++ GFD ++GA
Sbjct: 755 NRVDDIVVFHPLGKEQIKSIAKIQLASLRARLAEKGYKLTLTAAAMDKLADAGFDPVFGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 711
R + K+++ ++ ++P A+ + G+LI P+S
Sbjct: 815 RPL---KRAI-----QVQVENPLAHQLLAGELI---PES 842
>gi|406597401|ref|YP_006748531.1| ClpB protein [Alteromonas macleodii ATCC 27126]
gi|407684414|ref|YP_006799588.1| ClpB protein [Alteromonas macleodii str. 'English Channel 673']
gi|407688343|ref|YP_006803516.1| ClpB protein [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|406374722|gb|AFS37977.1| ClpB protein [Alteromonas macleodii ATCC 27126]
gi|407246025|gb|AFT75211.1| ClpB protein [Alteromonas macleodii str. 'English Channel 673']
gi|407291723|gb|AFT96035.1| ClpB protein [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 858
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/699 (60%), Positives = 562/699 (80%), Gaps = 18/699 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT DLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTTDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+F+DEL
Sbjct: 221 QRIINGEVPEGLKNKRVLALDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE MD+LERR+IQLK+E +A+ +E D++S KRL +I+ E + E KYA LEK
Sbjct: 401 IRLQIDSKPEEMDRLERRIIQLKLEEQALAKETDDASHKRLEMIELEREQAETKYAELEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK E+E+ +L + A R SD +S+L+YG + +LE L++ ++
Sbjct: 461 VWLDEKDAMQGTQTIKGELEQAKLDLEIARRASDLNRMSELQYGRIPELEAKLEQAAE-- 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
N + TLLK KV EIA+++SR TGIPV+++++ EREKLL +E++L KRVVGQ+
Sbjct: 519 ----NETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREKLLRMEDVLHKRVVGQE 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ E++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+++MTSNLGSD I++ + + +K +VM+ V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQDKHNESQYDDMKASVMSVVGQHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DDI+VF L ++ I SIA IQL L+ +L + L +S AA+ K+++ GFD ++GA
Sbjct: 755 NRVDDIVVFHPLGKEQIKSIAKIQLASLRARLAEKGYKLTLSAAAMDKLADAGFDPVFGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 711
R + K+++ ++ ++P A+ + G+LI P+S
Sbjct: 815 RPL---KRAI-----QVQVENPLAHQLLAGELI---PES 842
>gi|407792049|ref|ZP_11139122.1| clpB protein [Gallaecimonas xiamenensis 3-C-1]
gi|407198214|gb|EKE68253.1| clpB protein [Gallaecimonas xiamenensis 3-C-1]
Length = 857
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/661 (62%), Positives = 548/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L++YTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LERYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDLGALLAGAKYRGEFEERLKALLNELAKEEGQVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYEIHHSVEITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL L+++E+ L+ +Y L++
Sbjct: 401 IRMQIDSKPEELDRLERRMIQLKLERQALTKETDDASKKRLNLLEEELADLDGRYEELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + +QQIK ++E+ R ++ A R ++++ +S+L+YG + +LE+ L S +
Sbjct: 461 IWNTEKAALSGTQQIKAQLEEARQELEIARRAANYERMSELQYGRIPELEKQLDLASAAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLLK KV EIAE+VSR TGIPV+K+++ ER+KLL +E+ L KRVVGQ+
Sbjct: 521 MQ------EMTLLKHKVSDGEIAEVVSRWTGIPVAKMLEGERDKLLQMEDNLHKRVVGQE 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NAIRRSR+GLSD +RP GSF+FLGPTGVGKTELCK L+ +F+ +++++R+DM
Sbjct: 575 EAVTAVANAIRRSRAGLSDPRRPIGSFLFLGPTGVGKTELCKALAEFLFDTDDAMVRLDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNLLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD++GRT++FRNT+++MTSNLGS +I+E K D E++K VM+EV +FRPEFI
Sbjct: 695 DDGRLTDSQGRTVDFRNTVVIMTSNLGSARIQEHAGKEDYEVMKAMVMDEVGHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L+ + I IA IQL LK +L + + L++S AL ++ GFD ++GA
Sbjct: 755 NRIDETVVFHPLSDQVIRQIATIQLAGLKKRLAERDYQLELSDGALDLLAEAGFDPLFGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|407804423|ref|ZP_11151246.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
sp. W11-5]
gi|407021612|gb|EKE33377.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
sp. W11-5]
Length = 859
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/695 (59%), Positives = 555/695 (79%), Gaps = 19/695 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLT +A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIG PGVGKTAIVEGLA
Sbjct: 161 LDKYTVDLTSRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGAPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKDKRVLALDMAALIAGAKYRGEFEERLKAVLNELAKQEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YEVHHGVEITD AI+AA++LS RYI+DR +PDKAIDLIDEA ++
Sbjct: 341 PSVEDTIAILRGLKERYEVHHGVEITDGAIIAAAKLSQRYITDRQLPDKAIDLIDEAGSR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDS PE MD+L+R+LIQLK+E EA+++E DE+S+KRL ++++I + E +YA+L +
Sbjct: 401 IRMEIDSMPEEMDRLDRKLIQLKMEREALRKEEDEASRKRLEKLEEDIARFEKEYADLRE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK ++ Q++K ++EK R+++++A R D +S+L+YGE+ LE+ L+E ++
Sbjct: 461 IWDAEKATLQGEQEVKADLEKARVEMDQARRAGDLNRMSELQYGEIPALEKKLEEAKNRE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+ L KRVVGQD
Sbjct: 521 QQ------ETQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDALHKRVVGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ ++++RIDM
Sbjct: 575 EAVQAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSLAEFLFDTTDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT++VMTSNLGSD I+ + + + +K AVM V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRLAGEEHYDAMKAAVMEVVGQHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+++VF L + I IA+IQL+ L+ +L + +M L ++ AL ++ + GFD +YGA
Sbjct: 755 NRVDEVVVFHPLEKGQIRGIADIQLDALRKRLAERDMRLVLTDTALDQLVDAGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKK--SPEANFIFLGDLI 705
R L + I +K +P A I GD +
Sbjct: 815 RP----------LKRAIQQKVENPLATAILRGDFL 839
>gi|307543921|ref|YP_003896400.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas
elongata DSM 2581]
gi|307215945|emb|CBV41215.1| K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
[Halomonas elongata DSM 2581]
Length = 859
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/667 (61%), Positives = 553/667 (82%), Gaps = 5/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQREALDKYTLDLTERASSGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI++GEVP L K++L LD+ LLAG KYRGEFE+RLK +LKE++ + +I
Sbjct: 215 IVEGLAQRIVDGEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERLKAVLKELAEEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQHIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPTEEDTVAILRGLKERYEVHHGVDITDGAIIAAAKLSTRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA+++I++E+DSKPE MD+L+RRLIQLK+E E +K+E DE+S+KRL ++++I++LE +
Sbjct: 395 DEASSRIRMELDSKPEEMDRLDRRLIQLKMEREHLKKETDEASRKRLESLEEQISELERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK I+ + Q K+E+++ R+ + +A R+ D +S+L+YG + +LER +
Sbjct: 455 YADLDEIWKAEKASIQGAAQFKDELDRARIDLEQARRQGDLGRMSELQYGVIPELERKIA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E S+++ + ++ LL++ V EEIAE+VSR TGIPVSK+++ ER+KLL +E L +
Sbjct: 515 ESSEEEA----DTSEHRLLRSNVTEEEIAEVVSRWTGIPVSKMLEGERDKLLRMEEALHE 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA++AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ EE+
Sbjct: 571 RVIGQDEAVNAVSNAVRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKSLAWFLFDTEEA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA++DVFN
Sbjct: 631 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+ M D +K VM V +
Sbjct: 691 ILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQRMGSDEDYTQMKSMVMEVVGNH 750
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPE INRID+++VF L ++ I +IA+IQL L+++L + ++ ++S A+ +++ GF
Sbjct: 751 FRPELINRIDEVVVFHALEQEQIRAIADIQLERLRDRLAEHDLSFEVSDEAMAQLAAAGF 810
Query: 667 DLIYGAR 673
D ++GAR
Sbjct: 811 DPVFGAR 817
>gi|319786186|ref|YP_004145661.1| ATP-dependent chaperone ClpB [Pseudoxanthomonas suwonensis 11-1]
gi|317464698|gb|ADV26430.1| ATP-dependent chaperone ClpB [Pseudoxanthomonas suwonensis 11-1]
Length = 861
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/670 (61%), Positives = 544/670 (81%), Gaps = 10/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+ GEVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ N+ II
Sbjct: 215 IVEGLAQRIVKGEVPEQLKGKRVLSLDMGALIAGAKFRGEFEERLKAVLNDLAKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIADRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRL+QLKI+ E +K+E D++SK+RL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLVQLKIQREMLKKEKDDASKQRLADLEADIEKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + ++KE++E+ R+++ A R D+ +S+++YG + LE+ L
Sbjct: 455 FSDLNEVWKSEKAALQGATRVKEQLEQARIELEAAQRAQDYARMSEIQYGRIPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ F L++ KV EEIAE+VSR TGIPVSK+++ ER+KLL +E L +
Sbjct: 515 AAAEA------EKKDFKLVQDKVTEEEIAEVVSRWTGIPVSKMLEGERDKLLRMEQQLHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEAI AVS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++ E+
Sbjct: 569 RVVGQDEAIRAVSDAVRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKGLAEFLFDSAEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI---IKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E +K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSPEAYVQMKAAVMGVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+D+I+VF L++ I SIA IQL+ L+ +L + + L +S AAL+ + N
Sbjct: 749 QAHFRPEFINRLDEIVVFHPLDKAQITSIARIQLHGLEKRLHERGLKLDLSDAALELLGN 808
Query: 664 IGFDLIYGAR 673
+GFD +YGAR
Sbjct: 809 VGFDPVYGAR 818
>gi|380513637|ref|ZP_09857044.1| ATP-dependent clp protease subunit protein [Xanthomonas sacchari
NCPPB 4393]
Length = 861
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/671 (61%), Positives = 550/671 (81%), Gaps = 12/671 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ N+ II
Sbjct: 215 IVEGLAQRIVNGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIAKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L+++WK EK ++ + +IKE+IE+ R+++ A R+ D+ +S+++YG L LE+ L
Sbjct: 455 FSDLDEVWKSEKAALQGATKIKEQIEQARVELEAAQRRQDYAKMSEIQYGLLPNLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L +
Sbjct: 515 AANEAE------QHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++ ++
Sbjct: 569 RVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+SDVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-----IKLAVMNE 602
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ GD +K AVM
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SGDGSAEAYTQMKAAVMGV 747
Query: 603 VKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKIS 662
V+ +FRPEFINR+DDI+VF L++ I SIA IQL+ L+ +L + + +++ AL+ +
Sbjct: 748 VQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLHGLEKRLAERGLKIELGDRALELLG 807
Query: 663 NIGFDLIYGAR 673
N+GFD +YGAR
Sbjct: 808 NVGFDPVYGAR 818
>gi|350560805|ref|ZP_08929645.1| ATP-dependent chaperone ClpB [Thioalkalivibrio thiocyanoxidans ARh
4]
gi|349783073|gb|EGZ37356.1| ATP-dependent chaperone ClpB [Thioalkalivibrio thiocyanoxidans ARh
4]
Length = 857
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/661 (62%), Positives = 551/661 (83%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+A GKLDPVIGRDDEIRRA+QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTERAEQGKLDPVIGRDDEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ LLAG KYRG+FE+RLK +LK+++ + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKDKRVLALDLGALLAGAKYRGDFEERLKSVLKDLAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YEVHHG+EITDPAIVAA++LS RYI+DR +PDKAIDL+DEA+++
Sbjct: 341 PTLEDTIAILRGLKERYEVHHGIEITDPAIVAAAQLSQRYITDRQLPDKAIDLVDEASSR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL ++ EI +LE +Y++LE+
Sbjct: 401 IRMEIDSKPEEMDRLDRRLIQLKIEREAMKKETDEASRKRLDALEDEIERLEREYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + QIKE++E+ R+++ A R D +S+L+YG + +L++ L++ ++ +
Sbjct: 461 IWKSEKAAVTGAAQIKEDLERARMELETARRAGDLNRMSELQYGRIPELQKGLEQAAELE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL+ KV EE+AE+VSR TGIPVSK+++ E++KLL +E + +RVVGQ+
Sbjct: 521 TR------ETRLLRNKVTDEEVAEVVSRWTGIPVSKMLEGEKDKLLRMEEAIGQRVVGQE 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NAIRR+R+GLSD RP GSF+FLGPTGVGKTEL K L+A +F+ E++++RIDM
Sbjct: 575 EAMRAVANAIRRARAGLSDPNRPSGSFLFLGPTGVGKTELTKALAAFLFDTEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++R+IGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 635 SEFMEKHSVARMIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD GRT++FRNT+IVMTSNLGS I+EM + + +K AVM V +FRPEFI
Sbjct: 695 DDGRLTDGHGRTVDFRNTVIVMTSNLGSQLIQEMAGEEHYQQMKAAVMEVVGSHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRIDD++VF L R+ I +I +IQL +L+ +L + ++ ++S+AAL ++ GFD +YGA
Sbjct: 755 NRIDDVVVFHPLGREQIRAITDIQLRLLRQRLAERDIAFEVSEAALDRLGEAGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|384429028|ref|YP_005638388.1| chaperone ClpB [Xanthomonas campestris pv. raphani 756C]
gi|341938131|gb|AEL08270.1| chaperone ClpB [Xanthomonas campestris pv. raphani 756C]
Length = 859
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/673 (62%), Positives = 547/673 (81%), Gaps = 16/673 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 213 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 333 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 393 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 453 FSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 508
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 509 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 564
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 565 HRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 624
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA++DV
Sbjct: 625 EAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADV 684
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-----IKLAVM 600
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ GD +K AVM
Sbjct: 685 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SGDGSAEAYTQMKAAVM 743
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AL+
Sbjct: 744 GVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDPALEL 803
Query: 661 ISNIGFDLIYGAR 673
+ N+GFD +YGAR
Sbjct: 804 LGNVGFDPVYGAR 816
>gi|21232500|ref|NP_638417.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767416|ref|YP_242178.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990519|ref|YP_001902529.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris
str. B100]
gi|54035864|sp|Q8P6A0.1|CLPB_XANCP RecName: Full=Chaperone protein ClpB
gi|21114288|gb|AAM42341.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572748|gb|AAY48158.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732279|emb|CAP50471.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris]
Length = 861
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/673 (62%), Positives = 547/673 (81%), Gaps = 16/673 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 455 FSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 510
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 511 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 567 HRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA++DV
Sbjct: 627 EAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-----IKLAVM 600
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ GD +K AVM
Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SGDGSAEAYTQMKAAVM 745
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AL+
Sbjct: 746 GVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDPALEL 805
Query: 661 ISNIGFDLIYGAR 673
+ N+GFD +YGAR
Sbjct: 806 LGNVGFDPVYGAR 818
>gi|408374171|ref|ZP_11171861.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
hongdengensis A-11-3]
gi|407766056|gb|EKF74503.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
hongdengensis A-11-3]
Length = 861
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/713 (59%), Positives = 567/713 (79%), Gaps = 16/713 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT++LTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LDKYTVNLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L E++ + II+FIDEL
Sbjct: 221 QRIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERLKAVLNELAKQEGRIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+RYI+DR +PDKAIDLIDEA ++
Sbjct: 341 PSVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHRYITDRQLPDKAIDLIDEAGSR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDS PE MD+L+RRLIQLK+E EA+++E DE+S+KRL +++EI + E +YA+LE+
Sbjct: 401 IRMEIDSMPEEMDRLDRRLIQLKMEREALRKEEDEASRKRLEKLEEEIAEQERQYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ +Q+ K E+E+ R+++ +A R D +S+L+YG + +LE+ K + +D
Sbjct: 461 IWQAEKAALQGAQEYKAELEQARVEMEQARRAGDLNRMSELQYGVIPELEK--KVQQAQD 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ ++ LL+ KV EEIAE+VS+ TGIPVSK+++ E++KLL +E L +RVVGQD
Sbjct: 519 QEEQQAQSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEKDKLLRMEEALHQRVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+++RIDM
Sbjct: 579 EAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALANFLFDTEEAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT++VMTSNLGSD I+++ D E +K AVM V +FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGDNDYEAMKAAVMEVVGNHFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L + + IA+IQL+ L+ +L + ++ L++S AAL K+ GFD +YGA
Sbjct: 759 NRVDETVVFHPLQKDQLKGIASIQLDFLRKRLAERDIRLELSDAALSKLVEAGFDPVYGA 818
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTLRMVYSMRNYA 725
R + K+++ L ++P A + G+ DT+R+ S Y+
Sbjct: 819 RPL---KRAIQQQL-----ENPLAQALLKGEFAQG-----DTIRVDVSESGYS 858
>gi|438000238|ref|YP_007183971.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451812776|ref|YP_007449229.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339472|gb|AFZ83894.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451778745|gb|AGF49625.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 861
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/667 (62%), Positives = 545/667 (81%), Gaps = 2/667 (0%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DE + L KYT D+T AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKT
Sbjct: 153 DESNRNALSKYTTDVTSLARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKT 212
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLAQRIINGEVP++L K++L LD+A L+AG K+RGEFE+RLK +LK+IS + +
Sbjct: 213 AIVEGLAQRIINGEVPDNLRDKRVLSLDLASLIAGAKFRGEFEERLKAVLKDISA-ESNS 271
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
I+FIDELHT++G GK EGSIDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRF
Sbjct: 272 ILFIDELHTIMGAGKAEGSIDAGNMLKPALARGELHCIGATTLDEYRRYIEKDAALERRF 331
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QK++V+EP++E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDL
Sbjct: 332 QKVIVDEPNVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSNRYITDRFLPDKAIDL 391
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEA A+I++EIDSKPE MDKLERR+IQLKIE EA+K+E DE SKKRL I+ E+NK++
Sbjct: 392 IDEAGARIRMEIDSKPEAMDKLERRIIQLKIEREAVKKESDEVSKKRLYSIEDELNKIQK 451
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+Y + EKIWK EK +++ ++ IKEEI+ +R K+ + R + +++L+Y +L +LE L
Sbjct: 452 EYDDYEKIWKSEKNIVEGTKNIKEEIDSLRAKMAELQRNGQYDRLAELQYSKLPELEERL 511
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
K I + KF LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL++ N L
Sbjct: 512 KSAESYSINQSED-KKFKLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLHMSNFLS 570
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
R++GQ EA++AVS++I R+R+GLSD RP GSF+FLGPTGVGKTEL K L+ +F++ +
Sbjct: 571 SRIIGQSEAVNAVSDSILRARAGLSDQSRPSGSFLFLGPTGVGKTELAKALADFMFDSRD 630
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVF
Sbjct: 631 HMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHLDVF 690
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
N+LLQ+LDDGRLTD+ GRT++FRNTII+MTSNLGS+ I+ M I+ +M E+K
Sbjct: 691 NVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNLGSNHIQNMMDSTYNEIRDVIMEELKAT 750
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
RPEF+NRID+I+ F L + + SI IQ++ LK++L + N+ + I++ A+ ++ GF
Sbjct: 751 LRPEFLNRIDEIVFFHSLKLEQMNSIVRIQIDQLKDRLKQKNIYIDIAEDAILMLAKNGF 810
Query: 667 DLIYGAR 673
D+++GAR
Sbjct: 811 DVVFGAR 817
>gi|385330270|ref|YP_005884221.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
gi|311693420|gb|ADP96293.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
Length = 858
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/668 (62%), Positives = 541/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALSKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L KK+L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+ IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRENIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHRYIADRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL + I +E +
Sbjct: 395 DEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKKRLSELSDVITGVERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK + SQ+IK +E+ R+ + A R D +S+L+YG++ +LER L
Sbjct: 455 YADLEEVWNTEKAALHGSQKIKSRLEQARIDLENARRAGDLGKMSELQYGQIPELERQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++ + LL+ +V EEIAEIVS+ TGIPVSK+++ ER+KL+ +E L
Sbjct: 515 MASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLEGERDKLMRMEEALHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 569 RVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I++ + G++ E++K AVM V
Sbjct: 689 ILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQ-KAGEENYEVMKNAVMEVVGT 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINR+D+++VF L I IA IQ+ L +L + +M L++ AA++ ++ +G
Sbjct: 748 HFRPEFINRVDEVVVFHPLAESQIQGIARIQIESLSKRLKEQDMKLELDDAAMELLAEVG 807
Query: 666 FDLIYGAR 673
+D +YGAR
Sbjct: 808 YDPVYGAR 815
>gi|78048880|ref|YP_365055.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037310|emb|CAJ25055.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 861
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/672 (62%), Positives = 545/672 (81%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 455 FSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 510
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 511 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDDL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 567 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 627 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 746
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 747 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 806
Query: 662 SNIGFDLIYGAR 673
N+GFD +YGAR
Sbjct: 807 GNVGFDPVYGAR 818
>gi|350422236|ref|XP_003493100.1| PREDICTED: chaperone protein ClpB-like [Bombus impatiens]
Length = 856
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 543/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRNALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP L +K++L LD+ L+AG KYRGEFE+RLK +LK+++ + +I
Sbjct: 215 IVEGLAQRIVNSEVPEGLRNKRVLSLDMGALIAGAKYRGEFEERLKAVLKDLAKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+L+RR+IQLK+E +A+K+E D++SKKRL ++ +E+ + E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLDRRIIQLKLEQQALKKETDDASKKRLEMLSEELTEKEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+ WK EK + +Q IKE++EK R ++ +A R D +S+L+YG + LE+ L
Sbjct: 455 YASLEEEWKAEKAAVSGTQTIKEKLEKARTELEQARRAGDLNKMSELQYGRIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ +Q + LL+ KV + EIAE++S++TGIPVS++++ E+EKLL++E L +
Sbjct: 515 QATQSE------GKTMKLLRNKVTAHEIAEVLSKSTGIPVSRMMESEKEKLLHMEQALHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKAN +VFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKANPEVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS+ I+ + + +K VM V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSELIQGHDNLSYDEMKALVMTVVTQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L R+NI +IA IQL ++N+L + IS AAL +++ +GFD
Sbjct: 749 RPEFINRIDETVVFHPLGRENIKAIAKIQLARVENRLAEHGYQFTISDAALSQLAEVGFD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|261856613|ref|YP_003263896.1| ATP-dependent chaperone ClpB [Halothiobacillus neapolitanus c2]
gi|261837082|gb|ACX96849.1| ATP-dependent chaperone ClpB [Halothiobacillus neapolitanus c2]
Length = 860
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/667 (61%), Positives = 544/667 (81%), Gaps = 5/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KY+IDLT +A GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 156 EESRQALEKYSIDLTARAEAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 215
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP +L +K++L LD+ LLAG K+RG+FE+RLK +L +++ + +I
Sbjct: 216 IVEGLAQRIVNGEVPENLKNKRVLSLDMGALLAGAKFRGDFEERLKGVLNDVAKQEGRVI 275
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 276 LFIDEIHTMVGAGKSDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 335
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+RY++DR +PDKAIDLI
Sbjct: 336 KVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHRYVTDRQLPDKAIDLI 395
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++EIDSKPE MD+LERRLIQLKIE A+K+E DE+S KRL ++++I++L +
Sbjct: 396 DEAASRLRMEIDSKPEEMDRLERRLIQLKIEQVALKKEKDEASLKRLADLEEQIDRLGRE 455
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+IWK EK +++ S ++KE+++ R+ A R D +S+L+YG + +LER L+
Sbjct: 456 YSELEEIWKAEKLMVEGSAKVKEQLDHARIDFETARRAGDLARMSELQYGRIPELERQLQ 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ KVG EEIAE+V+R TGIPV+K+++ E++KLL +E L
Sbjct: 516 QAQSAE----QTETTPRLLRNKVGEEEIAEVVARATGIPVAKMLEGEKDKLLRMEEALAT 571
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ +V++AIRRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+ EES
Sbjct: 572 RVVGQDEAVKSVADAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELTKALANFLFDTEES 631
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RRKPYS+ILLDE+EKA+ DVFN
Sbjct: 632 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFN 691
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+EM E D + +K AV+ V +
Sbjct: 692 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHLIQEMAETNDYDAMKTAVLEVVGGH 751
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L R+ I I +IQ++ L+ +L + ++ ++++ AL + GF
Sbjct: 752 FRPEFINRIDEVVVFHPLGREQIRQIVDIQIDFLRKRLAERDLQIELTIQALDLLGEAGF 811
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 812 DPVYGAR 818
>gi|260771107|ref|ZP_05880034.1| ClpB protein [Vibrio furnissii CIP 102972]
gi|260613704|gb|EEX38896.1| ClpB protein [Vibrio furnissii CIP 102972]
Length = 857
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/701 (59%), Positives = 559/701 (79%), Gaps = 15/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQMDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLNILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ RL + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARLDLEVARRAGDLSRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPV+K+++ E+EKLL +E++L +RV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVAKMLEAEKEKLLRMEDVLHQRVIGQV 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFASLDYQGIKEQVMEVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L R++I SIA+IQL L+ +LL+ + +L++S AL I+ +GFD +YGA
Sbjct: 755 NRVDETVVFHPLGREHIKSIASIQLERLRKRLLEKDFELQVSDEALDLIAQVGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
R + K+++ + + ++P A I G + P LD
Sbjct: 815 RPL---KRAI-----QQNVENPLAKSILAGTFLPGTPIKLD 847
>gi|359787428|ref|ZP_09290476.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
GFAJ-1]
gi|359295309|gb|EHK59583.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
GFAJ-1]
Length = 859
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/662 (61%), Positives = 545/662 (82%), Gaps = 6/662 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LNKYTMDLTQRALDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +LKE+S + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERLKAVLKELSQEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTRYITDRQLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE++KKRL + +I++LE +YA+L++
Sbjct: 401 IRMELDSKPEEMDRLDRRLIQLKMEREALKKETDEATKKRLDALNNQIHELEREYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK I+ + Q K E+E+ R+ + +A R+ D +S+++YG++ LE+ + E + +
Sbjct: 461 IWKAEKASIQGAAQFKAELEQARIDLEQARRQGDLGRMSEIQYGKIPALEKKISEAGEGE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
++ LL++ V EEIAE+VSR TGIPVSK+++ ER+KLL +E L +RV+GQ
Sbjct: 521 ADTASH----QLLRSNVTEEEIAEVVSRWTGIPVSKMLEGERDKLLRMEEALHERVIGQH 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ EE+++RIDM
Sbjct: 577 EAVEAVANAVRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKSLANFLFDTEEAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKIYFRPEF 611
+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M + D E++K VM V +FRPE
Sbjct: 697 EDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDNDYEVMKSTVMEVVGNHFRPEL 756
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L + I +IA IQL LK +L + ++ L+IS A+ +++ +GFD +YG
Sbjct: 757 INRIDEVVVFHALGQTQIQAIAGIQLERLKARLAEHDLSLEISDDAMAQLAVVGFDPVYG 816
Query: 672 AR 673
AR
Sbjct: 817 AR 818
>gi|358448455|ref|ZP_09158958.1| ATPase [Marinobacter manganoxydans MnI7-9]
gi|357227243|gb|EHJ05705.1| ATPase [Marinobacter manganoxydans MnI7-9]
Length = 858
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/668 (62%), Positives = 541/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALSKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L KK+L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+ IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRENIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHRYIADRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL + I +E +
Sbjct: 395 DEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKKRLSELSDVITGVERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK + SQ+IK +E+ R+ + A R D +S+L+YG++ +LER L
Sbjct: 455 YADLEEVWNTEKAALHGSQKIKSRLEQARIDLENARRAGDLGKMSELQYGQIPELERQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++ + LL+ +V EEIAEIVS+ TGIPVSK+++ ER+KL+ +E L
Sbjct: 515 MASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLEGERDKLMRMEEALHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 569 RVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I++ + G++ E++K AVM V
Sbjct: 689 ILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQ-KAGEESYEVMKNAVMEVVGT 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINR+D+++VF L I IA IQ+ L +L + +M L++ AA++ ++ +G
Sbjct: 748 HFRPEFINRVDEVVVFHPLAESQIQGIARIQIESLSKRLKEQDMKLELDDAAMELLAEVG 807
Query: 666 FDLIYGAR 673
+D +YGAR
Sbjct: 808 YDPVYGAR 815
>gi|448747291|ref|ZP_21728952.1| Chaperonin ClpB [Halomonas titanicae BH1]
gi|445565203|gb|ELY21315.1| Chaperonin ClpB [Halomonas titanicae BH1]
Length = 885
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/667 (61%), Positives = 547/667 (82%), Gaps = 11/667 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 181 LNKYTMDLTQRALDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 240
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +LKE+S + +I+FIDEL
Sbjct: 241 QRIVNGEVPEGLKEKRVLSLDMGSLLAGAKFRGEFEERLKAVLKELSQEEGRVILFIDEL 300
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 301 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 360
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 361 PSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTRYITDRQLPDKAIDLIDEAASR 420
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE++KKRL + +I++LE +YA+L++
Sbjct: 421 IRMELDSKPEAMDRLDRRLIQLKMEREALKKETDEATKKRLEALNTQIHELEREYADLDE 480
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK I+ + Q K E+E+ R+ + +A R+ D +S+++YG++ +LE+ + E + +
Sbjct: 481 IWKAEKASIQGAAQFKAELEQARIDLEQARRQGDLGRMSEIQYGKIPELEKKIAESGEGE 540
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL++ V EEIAE+VSR TGIPVSK+++ ER+KLL +E L +RV+GQD
Sbjct: 541 A----DTSSHQLLRSNVTEEEIAEVVSRWTGIPVSKMLEGERDKLLRMEEALHQRVIGQD 596
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ EE+++RIDM
Sbjct: 597 EAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSLANFLFDTEEAMVRIDM 656
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 657 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL 716
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-------EKGDKEIIKLAVMNEVKIY 606
+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M + D E +K VM V +
Sbjct: 717 EDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDVSADKDSDYESMKNMVMEVVGNH 776
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPE INRID+++VF L ++ I +IA IQL LK +L + ++ L++S A+ +++ +GF
Sbjct: 777 FRPELINRIDEVVVFHALGQEQIQAIAGIQLERLKVRLAEHDLKLEVSPEAMAQLAVVGF 836
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 837 DPVYGAR 843
>gi|388546356|ref|ZP_10149632.1| chaperone [Pseudomonas sp. M47T1]
gi|388275593|gb|EIK95179.1| chaperone [Pseudomonas sp. M47T1]
Length = 854
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/660 (63%), Positives = 546/660 (82%), Gaps = 7/660 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L ++S + II+FIDEL
Sbjct: 221 QRIINGEVPDGLRGKRLLSLDMGSLIAGAKFRGEFEERLKGVLNDLSKQEGQIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL + +EI +LE +YA+LE+
Sbjct: 401 IRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEKLTEEITRLEREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ S QI+++IE+ R ++ A R+ D +++L+YG + LER L+ Q
Sbjct: 461 VWTSEKAEVQGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQMVDQ-- 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E+LL +RV+GQD
Sbjct: 519 ----HGKSDNQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLKMESLLHQRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+++RIDM
Sbjct: 575 EAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTDN+GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +FRPEFIN
Sbjct: 695 DDGRLTDNQGRTVDFRNTVIVMTSNLGSAQIQEL-TGDREAQRAAVMDAVSSHFRPEFIN 753
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID++++F L R I I IQL L+++L + ++L +S AL K+ +G+D +YGAR
Sbjct: 754 RIDEVVIFEALARDQIAGITQIQLGRLRSRLAERELNLTLSDEALDKLIAVGYDPVYGAR 813
>gi|163802431|ref|ZP_02196324.1| ClpB protein [Vibrio sp. AND4]
gi|159173732|gb|EDP58547.1| ClpB protein [Vibrio sp. AND4]
Length = 860
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/661 (62%), Positives = 546/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E D++S+KRL ++ +E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNENDDASEKRLDVLNEELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL++E++L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLHMEDVLHKRVIGQA 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIKNEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L +L + L++S+ AL+ IS +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLEHLAKRLEEKGYQLEVSEKALELISQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|381172820|ref|ZP_09881938.1| ATP-dependent chaperone ClpB [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380686745|emb|CCG38425.1| ATP-dependent chaperone ClpB [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 859
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/672 (62%), Positives = 546/672 (81%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 213 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 333 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 393 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK +++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 453 FSDLNEVWKSEKAVLQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 508
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 509 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 564
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 565 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 624
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 625 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 684
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 685 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 744
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 745 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 804
Query: 662 SNIGFDLIYGAR 673
++GFD +YGAR
Sbjct: 805 GSVGFDPVYGAR 816
>gi|350563575|ref|ZP_08932396.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium aerophilum AL3]
gi|349778710|gb|EGZ33061.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium aerophilum AL3]
Length = 855
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/661 (63%), Positives = 540/661 (81%), Gaps = 2/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLT +A GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 155 LEKYTIDLTARAESGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 214
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ LLAG KYRGEFE+RLK +LK++S N+ +I+FIDE+
Sbjct: 215 QRIINGEVPEGLRHKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLSKNEGQVILFIDEI 274
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEYR IEKDAA ERRFQK+LV+E
Sbjct: 275 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEYRDNIEKDAALERRFQKVLVDE 334
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+TI+ILRGL+++YEVHHGV ITDPAIVAA+ LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 335 PTEEDTIAILRGLKERYEVHHGVAITDPAIVAAARLSQRYITDRQLPDKAIDLIDEAASR 394
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MDKL+RRLIQLK+E A+K+E D++SKKRL ++K +I LE +Y++ E+
Sbjct: 395 IRMEIDSKPEEMDKLDRRLIQLKMEQVALKKEKDDASKKRLAILKDQIKDLEKQYSDFEE 454
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK +K ++ +QQ KE ++K R ++ A R+ + +S+L+YG + LE +K + +
Sbjct: 455 VWKKDKAALQGAQQYKEALDKARTEMEAARREGNLGRMSELQYGVIPDLEAKIKAADELE 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
I N + LL+ KV EEIAE+VSR TGIPVS++++ ER+KLL +E+ L +VVGQD
Sbjct: 515 I-TDENKGEMHLLRNKVSEEEIAEVVSRWTGIPVSRMMEGERDKLLRMEDSLSAKVVGQD 573
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVS+AIRRSR+GLSD +P GSF+FLGPTGVGKTEL K+L+ +F+++++I+R+DM
Sbjct: 574 EAVKAVSDAIRRSRAGLSDPNKPNGSFLFLGPTGVGKTELTKSLADFLFDSQDAIVRLDM 633
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 634 SEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 693
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+IVMTSNLGS I+E+ +G+ + +K AVM V +FRPEF+
Sbjct: 694 DDGRLTDGQGRTVDFRNTVIVMTSNLGSQIIQELAGEGNYDAMKSAVMEVVGGHFRPEFV 753
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRIDDI+VF L + I +I +IQL L+ +L +++ + +S AL I GFD +YGA
Sbjct: 754 NRIDDIVVFHPLGKGQIRAITDIQLESLRKRLADIDLKIDVSIPALDVIGEAGFDPVYGA 813
Query: 673 R 673
R
Sbjct: 814 R 814
>gi|410862267|ref|YP_006977501.1| ClpB protein [Alteromonas macleodii AltDE1]
gi|410819529|gb|AFV86146.1| ClpB protein [Alteromonas macleodii AltDE1]
Length = 858
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/702 (59%), Positives = 559/702 (79%), Gaps = 15/702 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT DLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTTDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+F+DEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE MD+LERR+IQLK+E +A+ +E D++S KRL +I+ E + E KYA LEK
Sbjct: 401 IRLQIDSKPEDMDRLERRIIQLKLEEQALAKETDDASHKRLEMIELEREQAETKYAELEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK E+E+ +L + A R SD +S+L+YG + +LE L++ ++
Sbjct: 461 VWLDEKDAMQGTQTIKGELEQAKLDLEIARRASDLNRMSELQYGRIPELEAKLEQAAE-- 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
N + TLLK KV EIA+++SR TGIPV+++++ EREKLL +E++L KRVVGQ+
Sbjct: 519 ----NETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREKLLRMEDVLHKRVVGQE 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ +VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ E+++IRIDM
Sbjct: 575 EAVQSVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMIRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+++MTSNLGSD I++ + + +K VMN V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQDKHSESQYDEMKGMVMNVVGQHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DDI+VF L ++ I SIA IQL L+ +L L +S AA+ K++ GFD ++GA
Sbjct: 755 NRVDDIVVFHPLGKEQIKSIAKIQLASLRARLADKGYKLTLSAAAMDKLAEAGFDPVFGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
R + K+++ ++ ++P A+ + G+LI + +D
Sbjct: 815 RPL---KRAI-----QVQVENPLAHQLLAGELIPESTVRIDA 848
>gi|334143474|ref|YP_004536630.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium cyclicum ALM1]
gi|333964385|gb|AEG31151.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium cyclicum ALM1]
Length = 853
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/661 (63%), Positives = 541/661 (81%), Gaps = 4/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLT +A GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 155 LKKYTIDLTSRAESGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 214
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK++S N+ +I+FIDE+
Sbjct: 215 QRIINGEVPEGLRNKRVLSLDLGALLAGAKYRGEFEERLKAVLKDLSKNEGQVILFIDEI 274
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEYR IEKDAA ERRFQK+LV+E
Sbjct: 275 HTMVGAGKAEGAMDAGNMLKPTLARGELHCIGATTLNEYRDNIEKDAALERRFQKVLVDE 334
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+TI+ILRGL+++YEVHHGV ITDPAIVAA+ LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 335 PTEEDTIAILRGLKERYEVHHGVAITDPAIVAAARLSQRYITDRQLPDKAIDLIDEAASR 394
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MDKL+RRLIQLK+E A+K+E D++SKKRL ++K +I +LE +Y++ E+
Sbjct: 395 IRMEIDSKPEEMDKLDRRLIQLKMEQVALKKEKDDASKKRLEILKDQIKELEKQYSDFEE 454
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK +K ++ +QQ KE ++K R ++ A R+ + +S+L+YG + LE +K +
Sbjct: 455 VWKKDKAALQGAQQYKEALDKARTEMEAARREGNLARMSELQYGVIPDLEAKIKAAEASE 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL+ KV +EIAE+VSR TGIPVS++++ EREKLL +E L +VVGQD
Sbjct: 515 AE---GDDHMHLLRNKVTEDEIAEVVSRWTGIPVSRMMEGEREKLLRMEESLSAKVVGQD 571
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVS+AIRRSR+GLSD +P GSF+FLGPTGVGKTEL K+L+ +F+++++I+R+DM
Sbjct: 572 EAVKAVSDAIRRSRAGLSDPNKPNGSFLFLGPTGVGKTELTKSLADFLFDSQDAIVRLDM 631
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 632 SEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 691
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRTI+FRNT+IVMTSNLGS I+E+ + + + +K AVM+ V +FRPEF+
Sbjct: 692 DDGRLTDGQGRTIDFRNTVIVMTSNLGSQIIQELAGEANYDAMKSAVMDVVGGHFRPEFV 751
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRIDDI+VF L + I +I +IQL L+++L+ +++ L +S AL + GFD +YGA
Sbjct: 752 NRIDDIVVFHPLGKAQIRAITDIQLQRLRDRLVDLDIKLDVSIPALDVMGEAGFDPVYGA 811
Query: 673 R 673
R
Sbjct: 812 R 812
>gi|269962555|ref|ZP_06176903.1| clpB protein [Vibrio harveyi 1DA3]
gi|424047832|ref|ZP_17785388.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-03]
gi|269832750|gb|EEZ86861.1| clpB protein [Vibrio harveyi 1DA3]
gi|408883142|gb|EKM21929.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-03]
Length = 857
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/661 (62%), Positives = 544/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVLNDELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQA 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIKNEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL+ L +L + L++S+ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLDRLAKRLEEKGYQLEVSEKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|399910053|ref|ZP_10778367.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
KM-1]
Length = 860
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/668 (61%), Positives = 552/668 (82%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESREALEKYTLDLTARAADGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +LKE++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERLKSVLKELAQEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+T++ILRGL+++YEVHH V+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTVAILRGLKERYEVHHKVDITDGAIIAAAKLSTRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA+++I++E+DSKPE MD+L+RRLIQLK+E E +K+E DE+S+KRL ++++I++LE +
Sbjct: 395 DEASSRIRMELDSKPEEMDRLDRRLIQLKMEREHLKKETDEASRKRLESLQEQIDELERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK I+ + Q KEE+EK ++++ +A RK D +S+L+YG + +LE+ +
Sbjct: 455 YADLDEIWKAEKASIQGAGQFKEELEKAKIELEQAQRKGDLTRMSELRYGVIPELEKKIT 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E S+ + + +K LL++ V EEIAE+VSR TGIPV+K+++ ER+KLL +E L +
Sbjct: 515 ESSEAEA----DTSKHKLLRSSVTEEEIAEVVSRWTGIPVAKMLEGERDKLLRMEEALHR 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 571 RVIGQEEAVTAVANAVRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALANFLFDTEEA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 631 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ + D E +K AVM+ V +
Sbjct: 691 ILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRLGGDDTKYEEMKQAVMDVVGM 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPE INRID+++VF L + I +IA IQL+ L+ +L + M L++S A+ +++ G
Sbjct: 751 HFRPELINRIDEVVVFHALRQAQIEAIAGIQLDRLRARLAEHGMQLEVSDEAMAQLALAG 810
Query: 666 FDLIYGAR 673
FD ++GAR
Sbjct: 811 FDPVFGAR 818
>gi|373468011|ref|ZP_09559297.1| ATP-dependent chaperone protein ClpB [Haemophilus sp. oral taxon
851 str. F0397]
gi|371757049|gb|EHO45848.1| ATP-dependent chaperone protein ClpB [Haemophilus sp. oral taxon
851 str. F0397]
Length = 856
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/666 (61%), Positives = 543/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +EN L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMENELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKEESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|359396324|ref|ZP_09189376.1| Chaperone protein ClpB [Halomonas boliviensis LC1]
gi|357970589|gb|EHJ93036.1| Chaperone protein ClpB [Halomonas boliviensis LC1]
Length = 860
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/662 (62%), Positives = 547/662 (82%), Gaps = 6/662 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LNKYTMDLTQRALDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +LKE+S + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERLKAVLKELSQEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYISDR +PDKAIDLIDEAA++
Sbjct: 341 PSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTRYISDRQLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKPE MD+L+RRLIQLK+E EA+K+E D++SKKRL + +I++LE +YA+L++
Sbjct: 401 IRMELDSKPEAMDRLDRRLIQLKMEREALKKETDDASKKRLEALSTQIHELEREYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK I+ + Q K ++E+ RL + +A R+ D +S+++YG++ +LE+ + E + +
Sbjct: 461 IWKAEKASIQGAAQFKADLEQARLDLEQARRQGDLGRMSEIQYGKIPELEKKIAESGEGE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL++ V EEIAE+VSR TGIPVSK+++ ER+KLL +E L +RV+GQ+
Sbjct: 521 A----DTSSHQLLRSNVTEEEIAEVVSRWTGIPVSKMLEGERDKLLRMEEALHERVIGQN 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ EE+++RIDM
Sbjct: 577 EAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSLANFLFDTEEAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKIYFRPEF 611
+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M + D E +K VM V +FRPE
Sbjct: 697 EDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDSDYEEMKNRVMEVVGNHFRPEL 756
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L ++ I +IA IQL LK +L + ++ L++S A+ +++ +GFD +YG
Sbjct: 757 INRIDEVVVFHALGQEQIQAIAGIQLERLKLRLAEHDLKLEVSPEAMAQLAVVGFDPVYG 816
Query: 672 AR 673
AR
Sbjct: 817 AR 818
>gi|170728049|ref|YP_001762075.1| ATP-dependent chaperone ClpB [Shewanella woodyi ATCC 51908]
gi|169813396|gb|ACA87980.1| ATP-dependent chaperone ClpB [Shewanella woodyi ATCC 51908]
Length = 857
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/703 (60%), Positives = 555/703 (78%), Gaps = 15/703 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLNELSQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ +S RY+SDR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASMSNRYVSDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +DKLERR IQLK+E +A+ +E DE+S +RLL I+KE+ ++E+K
Sbjct: 395 DEAASSIRIQIDSKPEPLDKLERRAIQLKLEEQALTKEADEASLRRLLTIRKELREVEVK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L ++W+ EK + +Q IK ++E+ RL ++ A R SD +S+L+YG + +LE+ L
Sbjct: 455 ASELNEVWRTEKAALAGTQHIKSDLEQARLDLDVARRASDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLL+ KV EIAE++SR TGIPVSK+++ EREKLL++E+ L
Sbjct: 515 LASQAEMQ------EMTLLRNKVTDVEIAEVLSRATGIPVSKMLEGEREKLLHMEDALHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 QVIGQNEAVDAVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELCKSLAKFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + +K VMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQERFSTLSYDEMKSEVMNVVVHS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D+ +VF L K+I IA+IQ+ L +L + + +L IS AL I+ GF
Sbjct: 749 FRPEFLNRVDETVVFHPLGEKHIEHIASIQIESLMRRLAEKDYELDISDDALSFIARAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 709
D +YGAR + K++L + ++P A I G L+ P
Sbjct: 809 DPVYGARPL---KRAL-----QQEVENPLAQKILSGSLVPGKP 843
>gi|294666951|ref|ZP_06732180.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603240|gb|EFF46662.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 859
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/672 (62%), Positives = 545/672 (81%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 213 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 333 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 393 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 453 FSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 508
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 509 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 564
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 565 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 624
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 625 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 684
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 685 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 744
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 745 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 804
Query: 662 SNIGFDLIYGAR 673
++GFD +YGAR
Sbjct: 805 GSVGFDPVYGAR 816
>gi|389808749|ref|ZP_10204912.1| ATP-dependent chaperone ClpB [Rhodanobacter thiooxydans LCS2]
gi|388442473|gb|EIL98665.1| ATP-dependent chaperone ClpB [Rhodanobacter thiooxydans LCS2]
Length = 865
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 543/674 (80%), Gaps = 14/674 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KY IDLTE+A KLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALQKYCIDLTERAERNKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRII GEVP L +++L LD+ L+AG K+RGEFE+RLK +L +++ N+ II
Sbjct: 215 IVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLNDLAKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RYISDR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYISDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D SK+RL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQRLADLETDIGKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L +IWK EK ++ + ++KE+IE+ +++ A R+ D+ +S+++YG+L LE+ L
Sbjct: 455 FSDLNEIWKSEKAALQGTTRVKEQIEQAHQELDAAQRQQDYAKMSEIQYGKLPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ Q F L++TKV +EEIAE+VSR TGIPVSK+++ ER+KLL++E+ L K
Sbjct: 515 AAQAAETQ------DFKLVQTKVTAEEIAEVVSRWTGIPVSKMLEGERDKLLHMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ ++
Sbjct: 569 RVVGQDEAVHAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFMFDTTDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS----DKIKEMEKGDKEI----IKLAV 599
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS D+++ D E +K +V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDEVESNGSDDAEAQYTRMKASV 748
Query: 600 MNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALK 659
+ V+ +FRPEFINR+D+I+VFR L++ I +IA IQL L+ +L + + + +S AL
Sbjct: 749 LGVVQAHFRPEFINRLDEIVVFRPLDKTQIRAIAKIQLAYLEKRLAERQLKMDVSDDALA 808
Query: 660 KISNIGFDLIYGAR 673
+ N+GFD +YGAR
Sbjct: 809 LLGNVGFDPVYGAR 822
>gi|344340643|ref|ZP_08771567.1| ATP-dependent chaperone ClpB [Thiocapsa marina 5811]
gi|343799324|gb|EGV17274.1| ATP-dependent chaperone ClpB [Thiocapsa marina 5811]
Length = 864
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/667 (62%), Positives = 542/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+TID+TE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKFTIDMTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+A L+AG K+RGEFE+RLK +L +I + +II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRLLSLDMAALIAGAKFRGEFEERLKAVLNDIGRQEGNII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP++E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPNVEDTIAILRGLKERYEVHHAVEITDPAIVAAAVLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDS PE MD+L RRLIQLKIE A+++E DE+SKKRL ++ +I + E +
Sbjct: 395 DEAASQIRMEIDSMPEEMDRLNRRLIQLKIEQVALRKESDEASKKRLTDLESQIERAERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L++IWK EK ++ + IKE +++ R+++ A R D +S+L+YG + +LE+ L
Sbjct: 455 FSDLDEIWKSEKAAVQGTAHIKEALDRARVEMETARRAGDLARMSELQYGRIPELEKQL- 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
S D + N LL+ KV EEIAEIVS+ TGIPVS++++ ER+KLL +E + K
Sbjct: 514 -ASAADAEQGEN----RLLRNKVTEEEIAEIVSKWTGIPVSRMLEGERDKLLRMEQEIEK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+A +F+ EE+
Sbjct: 569 RVVGQAEAVRAVSDAIRRSRAGLSDPGRPIGSFLFLGPTGVGKTELCKALAAFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSLILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRN +IVMTSNLGSD I+++ + + +K AVM V++
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSDVIQQVAGEANYAEMKDAVMEIVRVA 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+I+VF L I +IA IQ++ L+ +L +M L++S AAL + GF
Sbjct: 749 FRPEFINRLDEIVVFHPLQPAQIRAIARIQIDYLRKRLADRDMALEVSDAALDHLGEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|294624966|ref|ZP_06703618.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600729|gb|EFF44814.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 861
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/672 (62%), Positives = 545/672 (81%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 455 FSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 510
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 511 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 567 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 627 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 746
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 747 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 806
Query: 662 SNIGFDLIYGAR 673
++GFD +YGAR
Sbjct: 807 GSVGFDPVYGAR 818
>gi|418516808|ref|ZP_13082978.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410706405|gb|EKQ64865.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 861
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/672 (62%), Positives = 545/672 (81%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 455 FSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 510
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 511 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 567 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 627 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 746
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 747 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 806
Query: 662 SNIGFDLIYGAR 673
++GFD +YGAR
Sbjct: 807 GSVGFDPVYGAR 818
>gi|431925903|ref|YP_007238937.1| ATP-dependent chaperone ClpB [Pseudomonas stutzeri RCH2]
gi|431824190|gb|AGA85307.1| ATP-dependent chaperone ClpB [Pseudomonas stutzeri RCH2]
Length = 854
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNDLSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KL +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLARE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQIQEL-VGDPGAQRAAVMDAVAHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA+IQL L+ +L + + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAERELSLELSQEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|343492233|ref|ZP_08730606.1| chaperone ClpB protein [Vibrio nigripulchritudo ATCC 27043]
gi|342827573|gb|EGU61961.1| chaperone ClpB protein [Vibrio nigripulchritudo ATCC 27043]
Length = 858
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/661 (62%), Positives = 540/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+D++S KRL + E+ + E Y+ LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALVNEHDDASSKRLKALNSELEEKERDYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 IWKAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLLK KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLKNKVSDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQQ 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYDGMKEEVMEVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L N++ + +L++S+ AL IS +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGKEHIKSIASIQLTRLGNRMAEKGYELEVSEKALDLISEVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|392953749|ref|ZP_10319303.1| ATP-dependent chaperone ClpB [Hydrocarboniphaga effusa AP103]
gi|391859264|gb|EIT69793.1| ATP-dependent chaperone ClpB [Hydrocarboniphaga effusa AP103]
Length = 863
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/671 (62%), Positives = 542/671 (80%), Gaps = 10/671 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+AR GKLDPVIGRD+EIRR IQVL RR+KNNP LIGEPGVGKTA
Sbjct: 155 EENRQSLEKYTIDLTERARSGKLDPVIGRDEEIRRLIQVLSRRTKNNPALIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPESLKNKRLLSLDLGSLIAGAKFRGEFEERLKNVLGDLSKAEGGVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E++I+ILRGL+ +YE+HHGV+ITD AIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVGEPSVEDSIAILRGLKARYELHHGVDITDGAIVAAAKLSHRYITDRNLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I+IE DSKPE MD+LERRLIQLKIE EA+K+E DE +K+ L ++++I KLE +
Sbjct: 395 DEAASRIRIEKDSKPEAMDRLERRLIQLKIEREALKKEKDEGAKRSLTALEEDIVKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK E + S IKEEIE+VRL + A R D +++L+YG+L +LER L
Sbjct: 455 YADLEEIWKAEMATVSGSAHIKEEIERVRLDMETARRAGDLSRMAELQYGKLPELERRLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
S + Q K TL++ V EEIAE+V+R TGIPV+K+++ ER+KLL +E L +
Sbjct: 515 AASTEQKQ-----TKATLVRNNVTEEEIAEVVARWTGIPVAKLMEGERDKLLRMEEALHQ 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 570 RVVGQNEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEA 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 630 MVRIDMSEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-----EKGDKEIIKLAVMNE 602
+LLQ+LDDGRLTD +GRT++FRN +IVMTSNLGS+ I++M D I+ AVM
Sbjct: 690 VLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSNLIQDMMSTQSSSNDYAAIREAVMTV 749
Query: 603 VKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKIS 662
V +FRPEFINRID+ +VF L + I SIA +Q + +L + N+ ++ S AAL KI+
Sbjct: 750 VGQHFRPEFINRIDESVVFHPLGSQQIRSIAKVQSQNVVKRLAERNIAIEFSDAALDKIA 809
Query: 663 NIGFDLIYGAR 673
G+D +YGAR
Sbjct: 810 EAGYDPVYGAR 820
>gi|156973326|ref|YP_001444233.1| hypothetical protein VIBHAR_01007 [Vibrio harveyi ATCC BAA-1116]
gi|156524920|gb|ABU70006.1| hypothetical protein VIBHAR_01007 [Vibrio harveyi ATCC BAA-1116]
Length = 857
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 544/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVLNEELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQA 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIKNEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L +L + L+IS+ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEISEKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|145640973|ref|ZP_01796555.1| DNA polymerase I [Haemophilus influenzae R3021]
gi|145274487|gb|EDK14351.1| DNA polymerase I [Haemophilus influenzae 22.4-21]
Length = 708
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/666 (61%), Positives = 544/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 7 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 66
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 67 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 126
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+GTGK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 127 LFIDEIHTMVGTGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 186
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 187 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 246
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 247 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 306
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ V+ ++ +A R D +S+L+YG + LE+ L+
Sbjct: 307 YAELEEVWKSEKATLSGSQHIKQELDTVKTELEQARRAGDLAKMSELQYGRIPDLEKQLE 366
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 367 QAET------SEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 420
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 421 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 480
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 481 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 540
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 541 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 600
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 601 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 660
Query: 668 LIYGAR 673
IYGAR
Sbjct: 661 PIYGAR 666
>gi|261212183|ref|ZP_05926469.1| ClpB protein [Vibrio sp. RC341]
gi|260838791|gb|EEX65442.1| ClpB protein [Vibrio sp. RC341]
Length = 857
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|451812049|ref|YP_007448503.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777951|gb|AGF48899.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 861
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/667 (62%), Positives = 547/667 (82%), Gaps = 2/667 (0%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DE + L KYT D+T AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKT
Sbjct: 153 DESNRNALSKYTTDVTSLARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKT 212
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLAQRIINGEVP++L K++L LD+A L+AG K+RGEFE+RLK +LK+IS + I
Sbjct: 213 AIVEGLAQRIINGEVPDNLRDKRVLSLDLASLVAGAKFRGEFEERLKAVLKDISVDCSSI 272
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
+ FIDELHT++G GK EGSIDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRF
Sbjct: 273 L-FIDELHTIMGAGKAEGSIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRF 331
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QK++V+EP++E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDL
Sbjct: 332 QKVIVDEPNVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSNRYITDRFLPDKAIDL 391
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEA A+I++EIDSKPE MDKLERR+IQLKIE EA+K+E D+ SK+RL +I+ E+ K++
Sbjct: 392 IDEAGARIRMEIDSKPEAMDKLERRIIQLKIEREAVKKESDDVSKRRLCVIEDELKKIQQ 451
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+Y + EKIWK EK +++ ++ IKEEI+ ++ K+ + R + +++L+Y +L +LE L
Sbjct: 452 EYNDYEKIWKSEKNVVEGTKNIKEEIDSLKAKMAEFQRNGQYDRLAELQYSKLPELEEKL 511
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
K I ++ KF LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKLL++ + L
Sbjct: 512 KSAESYSINQSSD-KKFKLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLHMSDFLN 570
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+++GQ EA++AVS+AI R+R+GLSD RP GSF+FLGPTGVGKTEL K L+ +F++ +
Sbjct: 571 SKIIGQSEAVNAVSDAILRARAGLSDQSRPSGSFLFLGPTGVGKTELAKALADFMFDSRD 630
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVF
Sbjct: 631 HMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVF 690
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
N+LLQ+LDDGRLTD+ GRT++FRNTII+MTSNLGS+ I+ M + I+ VM E+K
Sbjct: 691 NVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNLGSNHIQSMMNDTYDEIRKVVMEELKAT 750
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
RPEF+NRID+I+ F L + + SI IQ++ LK++L + +M + +++ A+ ++N GF
Sbjct: 751 LRPEFLNRIDEIVFFHSLKLEQMSSIVKIQIDQLKDRLKQKSMRIDLTENAISSLANKGF 810
Query: 667 DLIYGAR 673
D+++GAR
Sbjct: 811 DIVFGAR 817
>gi|389796255|ref|ZP_10199311.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 116-2]
gi|388448895|gb|EIM04875.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 116-2]
Length = 863
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/672 (61%), Positives = 545/672 (81%), Gaps = 12/672 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KY IDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRHALEKYCIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRII GEVP L +++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLSDLSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP++E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPNVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYIADRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D SK+RL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQRLADLETDIGKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L +IWK EK ++ + ++KE+IE+ R +++ A R+ D+ +S+++YG+L +LE+ L
Sbjct: 455 FSDLNEIWKSEKAALQGTTKVKEQIEQARQELDAAQRRQDYAKMSEIQYGKLPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ Q F L++T+V +EEIAE+VSR TGIPV+K+++ ER+KLL++E+ L +
Sbjct: 515 AAQAAETQ------DFRLVQTRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLHMEDALHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ ++
Sbjct: 569 RVVGQDEAVHAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFMFDTTDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKE----IIKLAVMN 601
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++ + GD E +K +V+
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDAAESNGDAEEQYTQMKASVLG 748
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+D+I+VFR L++ I +IA IQL L+ +L + + L + AL +
Sbjct: 749 VVQAHFRPEFINRLDEIVVFRPLDKSQIRAIAKIQLEYLEKRLAERQLKLDVGDDALALL 808
Query: 662 SNIGFDLIYGAR 673
N+GFD +YGAR
Sbjct: 809 GNVGFDPVYGAR 820
>gi|375130115|ref|YP_004992214.1| clpB protein [Vibrio furnissii NCTC 11218]
gi|315179288|gb|ADT86202.1| clpB protein [Vibrio furnissii NCTC 11218]
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/701 (59%), Positives = 558/701 (79%), Gaps = 15/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSNRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQMDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLNILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ RL + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARLDLEVARRAGDLSRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPV+K+++ E+EKLL +E++L +RV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVAKMLEAEKEKLLRMEDVLHQRVIGQV 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFASLDYQGIKEQVMEVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L R++I SIA+IQL L+ +LL+ + +L++S AL I+ +GFD +YGA
Sbjct: 755 NRVDETVVFHPLGREHIKSIASIQLERLRKRLLEKDFELQVSDEALDLIAQVGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
R + K+++ + + ++P A I G + P LD
Sbjct: 815 RPL---KRAI-----QQNVENPLAKSILAGTFLPGTPIKLD 847
>gi|381150512|ref|ZP_09862381.1| ATP-dependent chaperone ClpB [Methylomicrobium album BG8]
gi|380882484|gb|EIC28361.1| ATP-dependent chaperone ClpB [Methylomicrobium album BG8]
Length = 858
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/667 (62%), Positives = 545/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + K++L LD+A L+AG K+RGEFE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKGKRVLALDMAALIAGAKFRGEFEERLKAVLNDLAKQEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KYEVHHGVEITDPAIVAA+ LSYRYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKEKYEVHHGVEITDPAIVAAAGLSYRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E DSKPE MD+L+RRLIQLKIE A+K+E D +SKKRL ++++EI ++E
Sbjct: 395 DEAASRIRMEQDSKPEEMDRLDRRLIQLKIEQVALKKESDPASKKRLEILEEEIAEVEKD 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S IKE+++ ++++ A R D +++L+YG + +LE+ L
Sbjct: 455 YSDLEEIWKAEKASLQGSASIKEKLDHAKVELESARRAGDLNRMAELQYGVIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ A K TLL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E + K
Sbjct: 515 QAGT------GEAKKMTLLRNKVTEEEIAEVVSKWTGIPVSKMMEGERDKLLRMEEAISK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ ++
Sbjct: 569 RVVGQEEALKAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDTADA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS +I+E+ + + + +K VM V ++
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSSRIQELAGEANYQEMKNEVMEIVGMH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L R+ I +IA IQ+ L+ +L + +IS+AAL ++ GF
Sbjct: 749 FRPEFINRIDEVVVFHPLEREQIRAIAKIQIANLQKRLADREIGFEISEAALDRLGEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|325924771|ref|ZP_08186207.1| ATP-dependent chaperone ClpB [Xanthomonas perforans 91-118]
gi|325544787|gb|EGD16134.1| ATP-dependent chaperone ClpB [Xanthomonas perforans 91-118]
Length = 861
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/672 (62%), Positives = 544/672 (80%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELH M+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHIMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 455 FSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 510
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 511 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 567 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 627 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 746
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 747 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 806
Query: 662 SNIGFDLIYGAR 673
N+GFD +YGAR
Sbjct: 807 GNVGFDPVYGAR 818
>gi|346725988|ref|YP_004852657.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650735|gb|AEO43359.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 861
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/672 (62%), Positives = 544/672 (80%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 455 FSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 510
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +E IAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 511 ----KQMLLANEVEHHDFKLVQDRVTAEGIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 567 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 627 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 746
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 747 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 806
Query: 662 SNIGFDLIYGAR 673
N+GFD +YGAR
Sbjct: 807 GNVGFDPVYGAR 818
>gi|153834659|ref|ZP_01987326.1| chaperone ClpB [Vibrio harveyi HY01]
gi|148868911|gb|EDL67969.1| chaperone ClpB [Vibrio harveyi HY01]
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/661 (62%), Positives = 544/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVLNEELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQA 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIKNEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L +L + L++S+ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSEKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|433677810|ref|ZP_20509745.1| ATP-dependent Clp protease subunit [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430817074|emb|CCP40175.1| ATP-dependent Clp protease subunit [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 861
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/670 (61%), Positives = 546/670 (81%), Gaps = 10/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L+KYT DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALEKYTTDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRGRRVLSLDMGALIAGAKFRGEFEERLKGVLNDLSKTEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP LSRGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIADRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KL+ +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLQRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L+++W+ EK ++ + +IKE+IE+ R+++ A R+ D+ +S+++YG L LE+ L
Sbjct: 455 FSDLDEVWRSEKATLQGATRIKEQIEQARVELEAAQRRQDYAKMSEIQYGLLPNLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + FTL++ +V +EEIAE+VSR TGIPV+++++ ER+KLL +E+ L +
Sbjct: 515 AAGDAE------HHDFTLVQDRVTAEEIAEVVSRWTGIPVNRMLEGERDKLLRMEDELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++ E+
Sbjct: 569 RVVGQQEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+SDVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI---IKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E +K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+DDI+VF L++ I SIA IQL L +L + + +++S AL+ + N
Sbjct: 749 QAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLGGLDKRLAERGLKIELSDRALELLGN 808
Query: 664 IGFDLIYGAR 673
+GFD +YGAR
Sbjct: 809 VGFDPVYGAR 818
>gi|15640730|ref|NP_230360.1| clpB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121587768|ref|ZP_01677528.1| clpB protein [Vibrio cholerae 2740-80]
gi|227080891|ref|YP_002809442.1| clpB protein [Vibrio cholerae M66-2]
gi|229505671|ref|ZP_04395181.1| ClpB protein [Vibrio cholerae BX 330286]
gi|229508756|ref|ZP_04398249.1| ClpB protein [Vibrio cholerae B33]
gi|229519494|ref|ZP_04408937.1| ClpB protein [Vibrio cholerae RC9]
gi|229608689|ref|YP_002879337.1| ClpB protein [Vibrio cholerae MJ-1236]
gi|254851041|ref|ZP_05240391.1| chaperone protein clpB [Vibrio cholerae MO10]
gi|255743832|ref|ZP_05417788.1| ClpB protein [Vibrio cholera CIRS 101]
gi|262156051|ref|ZP_06029170.1| ClpB protein [Vibrio cholerae INDRE 91/1]
gi|360034620|ref|YP_004936383.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae O1 str.
2010EL-1786]
gi|379740566|ref|YP_005332535.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae IEC224]
gi|417812757|ref|ZP_12459416.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-49A2]
gi|417815624|ref|ZP_12462257.1| ATP-dependent chaperone ClpB [Vibrio cholerae HCUF01]
gi|418331759|ref|ZP_12942700.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-06A1]
gi|418336179|ref|ZP_12945080.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-23A1]
gi|418343016|ref|ZP_12949811.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-28A1]
gi|418348183|ref|ZP_12952918.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43A1]
gi|419825177|ref|ZP_14348683.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1033(6)]
gi|421315766|ref|ZP_15766338.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1032(5)]
gi|421319565|ref|ZP_15770124.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1038(11)]
gi|421330936|ref|ZP_15781418.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1046(19)]
gi|421334605|ref|ZP_15785073.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1048(21)]
gi|421338497|ref|ZP_15788933.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-20A2]
gi|421345598|ref|ZP_15795984.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-46A1]
gi|422890818|ref|ZP_16933229.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-40A1]
gi|422901693|ref|ZP_16937056.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48A1]
gi|422905918|ref|ZP_16940763.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-70A1]
gi|422912513|ref|ZP_16947039.1| ATP-dependent chaperone ClpB [Vibrio cholerae HFU-02]
gi|422924996|ref|ZP_16958026.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-38A1]
gi|423144316|ref|ZP_17131930.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-19A1]
gi|423148968|ref|ZP_17136327.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-21A1]
gi|423152813|ref|ZP_17140011.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-22A1]
gi|423155618|ref|ZP_17142731.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-32A1]
gi|423164139|ref|ZP_17150926.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48B2]
gi|423730272|ref|ZP_17703590.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A1]
gi|423748838|ref|ZP_17711602.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-50A2]
gi|423891990|ref|ZP_17725677.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-62A1]
gi|423926765|ref|ZP_17730293.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-77A1]
gi|424001320|ref|ZP_17744409.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A2]
gi|424005476|ref|ZP_17748460.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-37A1]
gi|424023486|ref|ZP_17763150.1| ATP-dependent chaperone protein ClpB, partial [Vibrio cholerae
HC-62B1]
gi|424026290|ref|ZP_17765906.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-69A1]
gi|424585615|ref|ZP_18025209.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1030(3)]
gi|424598175|ref|ZP_18037373.1| ATP-dependent chaperone ClpB [Vibrio Cholerae CP1044(17)]
gi|424600929|ref|ZP_18040086.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1047(20)]
gi|424605908|ref|ZP_18044873.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1050(23)]
gi|424609742|ref|ZP_18048600.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-39A1]
gi|424612543|ref|ZP_18051350.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-41A1]
gi|424616366|ref|ZP_18055057.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-42A1]
gi|424621302|ref|ZP_18059830.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-47A1]
gi|424644280|ref|ZP_18082034.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-56A2]
gi|424651923|ref|ZP_18089447.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-57A2]
gi|440709003|ref|ZP_20889663.1| ClpB protein [Vibrio cholerae 4260B]
gi|443502818|ref|ZP_21069807.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-64A1]
gi|443506731|ref|ZP_21073521.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-65A1]
gi|443510838|ref|ZP_21077502.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-67A1]
gi|443514400|ref|ZP_21080939.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-68A1]
gi|443518213|ref|ZP_21084630.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-71A1]
gi|443523080|ref|ZP_21089320.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-72A2]
gi|443530710|ref|ZP_21096726.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-7A1]
gi|443538060|ref|ZP_21103916.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A1]
gi|449053972|ref|ZP_21732640.1| ClpB protein [Vibrio cholerae O1 str. Inaba G4222]
gi|54035907|sp|Q9KU18.1|CLPB_VIBCH RecName: Full=Chaperone protein ClpB
gi|9655153|gb|AAF93876.1| clpB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547995|gb|EAX58075.1| clpB protein [Vibrio cholerae 2740-80]
gi|227008779|gb|ACP04991.1| clpB protein [Vibrio cholerae M66-2]
gi|229344183|gb|EEO09158.1| ClpB protein [Vibrio cholerae RC9]
gi|229354280|gb|EEO19210.1| ClpB protein [Vibrio cholerae B33]
gi|229357894|gb|EEO22811.1| ClpB protein [Vibrio cholerae BX 330286]
gi|229371344|gb|ACQ61767.1| ClpB protein [Vibrio cholerae MJ-1236]
gi|254846746|gb|EET25160.1| chaperone protein clpB [Vibrio cholerae MO10]
gi|255738463|gb|EET93852.1| ClpB protein [Vibrio cholera CIRS 101]
gi|262030087|gb|EEY48732.1| ClpB protein [Vibrio cholerae INDRE 91/1]
gi|340042924|gb|EGR03887.1| ATP-dependent chaperone ClpB [Vibrio cholerae HCUF01]
gi|340043218|gb|EGR04178.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-49A2]
gi|341625017|gb|EGS50490.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-70A1]
gi|341626188|gb|EGS51594.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48A1]
gi|341626667|gb|EGS52030.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-40A1]
gi|341640689|gb|EGS65270.1| ATP-dependent chaperone ClpB [Vibrio cholerae HFU-02]
gi|341648353|gb|EGS72417.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-38A1]
gi|356420482|gb|EHH74008.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-06A1]
gi|356421196|gb|EHH74701.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-21A1]
gi|356426019|gb|EHH79358.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-19A1]
gi|356433702|gb|EHH86889.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-23A1]
gi|356434213|gb|EHH87395.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-22A1]
gi|356437743|gb|EHH90829.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-28A1]
gi|356442787|gb|EHH95622.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-32A1]
gi|356447761|gb|EHI00549.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43A1]
gi|356456276|gb|EHI08885.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48B2]
gi|356645774|gb|AET25829.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae O1 str.
2010EL-1786]
gi|378794076|gb|AFC57547.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae IEC224]
gi|395922507|gb|EJH33323.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1032(5)]
gi|395925890|gb|EJH36687.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1038(11)]
gi|395934789|gb|EJH45527.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1046(19)]
gi|395937398|gb|EJH48117.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1048(21)]
gi|395944933|gb|EJH55605.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-20A2]
gi|395948543|gb|EJH59188.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-46A1]
gi|395962410|gb|EJH72709.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-56A2]
gi|395963603|gb|EJH73866.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-57A2]
gi|395966424|gb|EJH76549.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-42A1]
gi|395974598|gb|EJH84123.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-47A1]
gi|395977461|gb|EJH86871.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1030(3)]
gi|395979149|gb|EJH88513.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1047(20)]
gi|408009468|gb|EKG47374.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-39A1]
gi|408016239|gb|EKG53793.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-41A1]
gi|408044616|gb|EKG80522.1| ATP-dependent chaperone ClpB [Vibrio Cholerae CP1044(17)]
gi|408046325|gb|EKG82025.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1050(23)]
gi|408611448|gb|EKK84809.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1033(6)]
gi|408627125|gb|EKK99950.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A1]
gi|408640334|gb|EKL12129.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-50A2]
gi|408658151|gb|EKL29223.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-77A1]
gi|408659180|gb|EKL30235.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-62A1]
gi|408848198|gb|EKL88251.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-37A1]
gi|408849139|gb|EKL89172.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A2]
gi|408873240|gb|EKM12442.1| ATP-dependent chaperone protein ClpB, partial [Vibrio cholerae
HC-62B1]
gi|408881203|gb|EKM20113.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-69A1]
gi|439975744|gb|ELP51856.1| ClpB protein [Vibrio cholerae 4260B]
gi|443432938|gb|ELS75459.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-64A1]
gi|443436762|gb|ELS82879.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-65A1]
gi|443440325|gb|ELS90014.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-67A1]
gi|443444420|gb|ELS97694.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-68A1]
gi|443448255|gb|ELT04890.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-71A1]
gi|443451030|gb|ELT11294.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-72A2]
gi|443458911|gb|ELT26306.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-7A1]
gi|443466493|gb|ELT41151.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A1]
gi|448266545|gb|EMB03772.1| ClpB protein [Vibrio cholerae O1 str. Inaba G4222]
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|229512401|ref|ZP_04401875.1| ClpB protein [Vibrio cholerae TMA 21]
gi|229350551|gb|EEO15497.1| ClpB protein [Vibrio cholerae TMA 21]
Length = 857
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|431800678|ref|YP_007227581.1| ATPase [Pseudomonas putida HB3267]
gi|430791443|gb|AGA71638.1| ATPase [Pseudomonas putida HB3267]
Length = 854
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI++LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIDRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQNEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|262401592|ref|ZP_06078158.1| ClpB protein [Vibrio sp. RC586]
gi|262352009|gb|EEZ01139.1| ClpB protein [Vibrio sp. RC586]
Length = 857
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSGRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|154706915|ref|YP_001425322.1| ClpB [Coxiella burnetii Dugway 5J108-111]
gi|154356201|gb|ABS77663.1| ClpB [Coxiella burnetii Dugway 5J108-111]
Length = 859
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/707 (61%), Positives = 569/707 (80%), Gaps = 12/707 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTEKA GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALAKYTIDLTEKAETGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +LK+I+ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERLKAVLKDIAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+ I+ILRGL+++YEVHHGVEITDPAI+AA+ LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQRYITDRNLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKP +D+LERRLIQLKIE EA+K+E DE+SKKRL ++ EI +E +
Sbjct: 395 DEAASQIRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASKKRLSDLETEIKNVEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE++WK EK + +QQIKEE+E+ R+++ A R D +SKL+YG + +L++ LK
Sbjct: 455 YSDLEEVWKSEKASLHGTQQIKEELEQARIELEAAGRAGDLARMSKLQYGIIPELDKKLK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQK+ Q ++ LL+++V EE+AE+VS+ T IPVSK+++ EREKLL++E L K
Sbjct: 515 AASQKEEQFHDH----KLLRSRVTEEEVAEVVSKWTHIPVSKMLEGEREKLLHMETELHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+A +F+ E++
Sbjct: 571 RVIGQDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTELCKALAAFLFDTEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYS+ILLDEIEKA++DVFN
Sbjct: 631 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHNDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E + + +K AVM V +F
Sbjct: 691 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGENYDKMKDAVMEVVAQHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++ I +IA IQ++ +K +L + + L IS AL +S +G+D
Sbjct: 751 RPEFINRIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLTISDDALDYLSGLGYD 810
Query: 668 LIYGARDVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN---KGPQ 710
+YGAR + K+ L L+ + +K E F+ G LIN KG Q
Sbjct: 811 PVYGARPL---KRVLQQQLENPLSQKILEGKFV-PGSLINIEKKGEQ 853
>gi|262191803|ref|ZP_06049974.1| ClpB protein [Vibrio cholerae CT 5369-93]
gi|262032290|gb|EEY50857.1| ClpB protein [Vibrio cholerae CT 5369-93]
Length = 857
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|315635103|ref|ZP_07890381.1| chaperone protein ClpB [Aggregatibacter segnis ATCC 33393]
gi|315476065|gb|EFU66819.1| chaperone protein ClpB [Aggregatibacter segnis ATCC 33393]
Length = 856
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/706 (59%), Positives = 560/706 (79%), Gaps = 14/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +LKE++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLKELAQEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL +++KE+++ E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELSEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + +LL+ +V EEIAE++SR TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 AAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNQEESYDDMKTLVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF LN+ NI +IA IQL L N++ L + A L IS IG+D
Sbjct: 749 RPEFINRIDETVVFHPLNKDNIRAIAEIQLKRLINRMESRGYVLHFTDATLNFISEIGYD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
IYGAR + K+++ + ++P A I G L+ + P S+D
Sbjct: 809 PIYGARPL---KRAIQQEI-----ENPLAQQILSGSLLPEKPISVD 846
>gi|339485554|ref|YP_004700082.1| ATP-dependent chaperone ClpB [Pseudomonas putida S16]
gi|338836397|gb|AEJ11202.1| ATP-dependent chaperone ClpB [Pseudomonas putida S16]
Length = 831
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 132 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 191
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 192 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLLNELSKQEGQII 251
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 252 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 311
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 312 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 371
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI++LE +
Sbjct: 372 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIDRLERE 431
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 432 YADLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQYGVIPDLERSLQ 491
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 492 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 545
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 546 RVIGQNEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 605
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 606 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 665
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 666 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGSHF 724
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 725 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 784
Query: 668 LIYGAR 673
+YGAR
Sbjct: 785 PVYGAR 790
>gi|303253337|ref|ZP_07339486.1| hypothetical protein APP2_0648 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302648019|gb|EFL78226.1| hypothetical protein APP2_0648 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 857
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/706 (58%), Positives = 566/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLH 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AAL I GFD
Sbjct: 749 RPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTNAALDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVVD 846
>gi|425901645|ref|ZP_18878236.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397893034|gb|EJL09510.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 854
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/666 (63%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEKLQEEITRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGQSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVSTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID++++F L R I I IQL L+++L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLELSGEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|303250165|ref|ZP_07336367.1| hypothetical protein APP6_1581 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252723|ref|ZP_07534614.1| hypothetical protein appser6_12370 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651228|gb|EFL81382.1| hypothetical protein APP6_1581 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859755|gb|EFM91777.1| hypothetical protein appser6_12370 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 857
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/706 (58%), Positives = 566/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLH 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AAL I GFD
Sbjct: 749 RPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAALDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVVD 846
>gi|325921790|ref|ZP_08183609.1| ATP-dependent chaperone ClpB [Xanthomonas gardneri ATCC 19865]
gi|325547722|gb|EGD18757.1| ATP-dependent chaperone ClpB [Xanthomonas gardneri ATCC 19865]
Length = 802
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/673 (62%), Positives = 547/673 (81%), Gaps = 16/673 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 96 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 155
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 156 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 215
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 216 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 275
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 276 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 335
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL ++ +I+KLE +
Sbjct: 336 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLETDIDKLERE 395
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ +L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 396 FYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 451
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 452 ----KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 507
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 508 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 567
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA++DV
Sbjct: 568 EAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADV 627
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-----IKLAVM 600
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ GD +K AVM
Sbjct: 628 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SGDGSAEAYTQMKAAVM 686
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L++ I SIA IQL+ L+ +L + + L + AAL+
Sbjct: 687 GVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLHGLEKRLSERGLKLDLDDAALEL 746
Query: 661 ISNIGFDLIYGAR 673
+ N+GFD +YGAR
Sbjct: 747 LGNVGFDPVYGAR 759
>gi|255022127|ref|ZP_05294130.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340782895|ref|YP_004749502.1| ClpB protein [Acidithiobacillus caldus SM-1]
gi|254968391|gb|EET25950.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340557046|gb|AEK58800.1| ClpB protein [Acidithiobacillus caldus SM-1]
Length = 865
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/667 (61%), Positives = 555/667 (83%), Gaps = 3/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+D TE+A GKLDPVIGRDDEIRR IQVL RRSKNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTLDYTERAAQGKLDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL K++L LD+ L+AG K+RGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIVNGEVPESLRGKRLLGLDLGALIAGAKFRGEFEERLKALLNDLAKAEGKII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
++LV+EP +E+TI+ILRGL+++YE HHGV ITDPA+VAA++LS+RYISDR +PDKAIDL+
Sbjct: 335 RVLVDEPSVEDTIAILRGLKERYEAHHGVRITDPALVAAAQLSHRYISDRNLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +D+LERRLIQL IE A+ +E DE+S+KRL ++ +I +L+ K
Sbjct: 395 DEAASRIKMEIDSKPEELDELERRLIQLNIEKVALAKEKDEASRKRLENLESQIAELQRK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE+IWK EK I+ + QI++E++++R++++ A R +D + +++++YG++ LE L+
Sbjct: 455 YQELEEIWKSEKLAIEGTSQIQKELDRLRVELDNARRANDLERMAQIQYGQIPALEAKLR 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ A TLL+T+V EEIAE++SR TGIPVSK+++ E+EKLL +E L
Sbjct: 515 EAEKQEADGQRKAP--TLLRTEVTEEEIAEVISRWTGIPVSKMLEGEKEKLLKMEERLRA 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA++AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTEL K L+ +F++E+
Sbjct: 573 RVVGQDEAVTAVANAIRRSRAGLADPRRPIGSFLFLGPTGVGKTELTKALAEFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ +VFN
Sbjct: 633 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPEVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E + GD E ++ AVM V+ +
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEYGRLGDVEGMRGAVMEVVQGH 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID++++F+ L+R+ + +IA IQ+ L+ +L + ++D+ +S AA+ ++ GF
Sbjct: 753 FRPEFLNRIDELVIFQPLSRQQLRAIAEIQMGSLRARLRERDLDIVLSDAAVNLLAETGF 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|350530312|ref|ZP_08909253.1| hypothetical protein VrotD_04277 [Vibrio rotiferianus DAT722]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/661 (62%), Positives = 543/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVLNEELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQA 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIKNEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L +L + L++S AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|258620376|ref|ZP_05715414.1| clpB protein [Vibrio mimicus VM573]
gi|258587255|gb|EEW11966.1| clpB protein [Vibrio mimicus VM573]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 540/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDDALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|37678899|ref|NP_933508.1| clpB protein [Vibrio vulnificus YJ016]
gi|54035791|sp|Q7MNK1.1|CLPB_VIBVY RecName: Full=Chaperone protein ClpB
gi|37197640|dbj|BAC93479.1| clpB protein [Vibrio vulnificus YJ016]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 539/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + +E+N+ E ++A LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSLNEELNEKEREFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 IWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLLK KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIKEQVMEVVTKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L++ +I SIA IQLN L N++ + L++S AL+ I+ +GFD +YGA
Sbjct: 755 NRVDETVVFHPLSQDHIKSIAAIQLNRLANRMEEHGYQLEVSDKALELIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|229525361|ref|ZP_04414766.1| ClpB protein [Vibrio cholerae bv. albensis VL426]
gi|229338942|gb|EEO03959.1| ClpB protein [Vibrio cholerae bv. albensis VL426]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/661 (62%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I++IGFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHIGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|307248109|ref|ZP_07530137.1| hypothetical protein appser2_10900 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306855286|gb|EFM87461.1| hypothetical protein appser2_10900 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 864
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/706 (58%), Positives = 566/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 160 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 219
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 220 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 279
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 280 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 339
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 340 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 399
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 400 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 459
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L
Sbjct: 460 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLH 519
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 520 EAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 575
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 576 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 635
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 636 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 695
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 696 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHF 755
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AAL I GFD
Sbjct: 756 RPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTNAALDHIGKAGFD 815
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 816 PLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVVD 853
>gi|153801889|ref|ZP_01956475.1| clpB protein [Vibrio cholerae MZO-3]
gi|229519981|ref|ZP_04409411.1| ClpB protein [Vibrio cholerae TM 11079-80]
gi|421353515|ref|ZP_15803848.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-45]
gi|124122600|gb|EAY41343.1| clpB protein [Vibrio cholerae MZO-3]
gi|229343033|gb|EEO08021.1| ClpB protein [Vibrio cholerae TM 11079-80]
gi|395954862|gb|EJH65471.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-45]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|418354585|ref|ZP_12957307.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-61A1]
gi|421328011|ref|ZP_15778526.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1042(15)]
gi|423159453|ref|ZP_17146425.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-33A2]
gi|424655872|ref|ZP_18093174.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A2]
gi|443534469|ref|ZP_21100381.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-80A1]
gi|356450009|gb|EHI02745.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-33A2]
gi|356453839|gb|EHI06499.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-61A1]
gi|395930596|gb|EJH41343.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1042(15)]
gi|408056911|gb|EKG91782.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A2]
gi|443462473|gb|ELT33512.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-80A1]
Length = 823
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 127 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 187 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 247 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 307 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 367 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 427 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L KRV+GQ
Sbjct: 487 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQK 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 541 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 721 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|333892371|ref|YP_004466246.1| ClpB protein [Alteromonas sp. SN2]
gi|332992389|gb|AEF02444.1| ClpB protein [Alteromonas sp. SN2]
Length = 858
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/693 (60%), Positives = 556/693 (80%), Gaps = 15/693 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T DLTE+A GKLDPVIGRDDEIRRA+QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+F+DEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK++V+E
Sbjct: 281 HTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVVVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+I+IDSKPE MD+LERR+IQLK+E +A+ +E D++S KRL +I+ E + E KY + EK
Sbjct: 401 IRIQIDSKPEDMDRLERRIIQLKLEEQALAKETDDASHKRLEMIELEREQAETKYNDFEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK +E+ +L + A R SD +S+L+YG + +LE L+ S+
Sbjct: 461 VWLDEKEAMQGTQTIKSALEQAKLDLEIARRASDLNRMSELQYGRIPELEAKLERASE-- 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
N + L+K KV EIA+++SR TGIPV+K+++ ER+KLL +E++L KRVVGQ
Sbjct: 519 ----NETRETKLVKNKVTEVEIADVLSRWTGIPVAKMLEGERDKLLKMEDVLHKRVVGQG 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ E++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+E+HS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMERHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK-EMEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+++MTSNLGSD I+ + E+ E +K +VM+ V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQNQHEESQYEEMKASVMSVVGQHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DDI+VF L + I SIA IQL L+ +L++ L +S AA+ K+++ GFD +YGA
Sbjct: 755 NRVDDIVVFHPLGKDEIKSIAKIQLAALRARLVEKGYKLNLSGAAMDKLADAGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ ++H ++P A + GDL+
Sbjct: 815 RPL---KRAI-----QVHIENPLAQKLLSGDLV 839
>gi|424032097|ref|ZP_17771518.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-01]
gi|408876509|gb|EKM15626.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-01]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/661 (62%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVLNDELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQA 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIKNEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L +L + ++S AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQFEVSDKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|352080093|ref|ZP_08951162.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 2APBS1]
gi|351684802|gb|EHA67871.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 2APBS1]
Length = 863
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/672 (61%), Positives = 544/672 (80%), Gaps = 12/672 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KY IDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYCIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRII GEVP L +++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLSDLSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYIADRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D SK+RL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQRLADLETDIGKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L +IWK EK ++ + ++KE+IE+ R +++ A R+ D+ +S+++YG+L +LE+ L
Sbjct: 455 FSDLNEIWKSEKAALQGTTKVKEQIEQARQELDAAQRRQDYAKMSEIQYGKLPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ Q F L++T+V +EEIAE+VSR TGIPV+K+++ ER+KLL++E+ L +
Sbjct: 515 AAQAAETQ------GFRLVQTRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLHMEDALHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ ++
Sbjct: 569 RVVGQDEAVHAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFMFDTTDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKE----IIKLAVMN 601
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++ + GD E +K +V+
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDAAESNGDAEEQYTQMKASVLG 748
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+D+I+VFR L++ I +IA IQL L+ +L + + L + AL +
Sbjct: 749 VVQAHFRPEFINRLDEIVVFRPLDKSQIRAIAKIQLEYLEKRLAERQLKLDVGDDALALL 808
Query: 662 SNIGFDLIYGAR 673
N+GFD +YGAR
Sbjct: 809 GNVGFDPVYGAR 820
>gi|422921936|ref|ZP_16955141.1| ATP-dependent chaperone ClpB [Vibrio cholerae BJG-01]
gi|341647481|gb|EGS71560.1| ATP-dependent chaperone ClpB [Vibrio cholerae BJG-01]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|165976510|ref|YP_001652103.1| ATP-dependent Clp protease subunit B [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|307261568|ref|ZP_07543236.1| hypothetical protein appser12_11290 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|165876611|gb|ABY69659.1| ATP-dependant Clp protease chain B [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306868691|gb|EFN00500.1| hypothetical protein appser12_11290 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/706 (58%), Positives = 566/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLH 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AAL I GFD
Sbjct: 749 RPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAALDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVVD 846
>gi|429887941|ref|ZP_19369446.1| ClpB protein [Vibrio cholerae PS15]
gi|429225109|gb|EKY31395.1| ClpB protein [Vibrio cholerae PS15]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|153215108|ref|ZP_01949815.1| clpB protein [Vibrio cholerae 1587]
gi|153826762|ref|ZP_01979429.1| clpB protein [Vibrio cholerae MZO-2]
gi|229530515|ref|ZP_04419903.1| ClpB protein [Vibrio cholerae 12129(1)]
gi|254224985|ref|ZP_04918599.1| clpB protein [Vibrio cholerae V51]
gi|254291987|ref|ZP_04962767.1| clpB protein [Vibrio cholerae AM-19226]
gi|297580832|ref|ZP_06942758.1| chaperone clpB [Vibrio cholerae RC385]
gi|417819563|ref|ZP_12466179.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE39]
gi|417823828|ref|ZP_12470420.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE48]
gi|419835628|ref|ZP_14359073.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-46B1]
gi|421350540|ref|ZP_15800906.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-25]
gi|422306203|ref|ZP_16393387.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1035(8)]
gi|423733990|ref|ZP_17707206.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-41B1]
gi|423947665|ref|ZP_17733624.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-40]
gi|423976935|ref|ZP_17737172.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-46]
gi|424008275|ref|ZP_17751225.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-44C1]
gi|424589954|ref|ZP_18029401.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1037(10)]
gi|124114899|gb|EAY33719.1| clpB protein [Vibrio cholerae 1587]
gi|125622372|gb|EAZ50692.1| clpB protein [Vibrio cholerae V51]
gi|149739413|gb|EDM53653.1| clpB protein [Vibrio cholerae MZO-2]
gi|150422126|gb|EDN14093.1| clpB protein [Vibrio cholerae AM-19226]
gi|229332288|gb|EEN97776.1| ClpB protein [Vibrio cholerae 12129(1)]
gi|297535248|gb|EFH74083.1| chaperone clpB [Vibrio cholerae RC385]
gi|340041125|gb|EGR02093.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE39]
gi|340048457|gb|EGR09379.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE48]
gi|395954662|gb|EJH65272.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-25]
gi|408036118|gb|EKG72565.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1037(10)]
gi|408627166|gb|EKK99985.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1035(8)]
gi|408631760|gb|EKL04288.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-41B1]
gi|408661665|gb|EKL32649.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-40]
gi|408666033|gb|EKL36836.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-46]
gi|408859041|gb|EKL98711.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-46B1]
gi|408866145|gb|EKM05534.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-44C1]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|417843784|ref|ZP_12489850.1| Chaperone protein ClpB [Haemophilus haemolyticus M21127]
gi|341948532|gb|EGT75158.1| Chaperone protein ClpB [Haemophilus haemolyticus M21127]
Length = 856
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/666 (61%), Positives = 541/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELADKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPTLEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAE------TGEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKEESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IANIQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIANIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|424809681|ref|ZP_18235058.1| clpB protein [Vibrio mimicus SX-4]
gi|342323169|gb|EGU18955.1| clpB protein [Vibrio mimicus SX-4]
Length = 823
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 540/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 127 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 187 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 247 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 307 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 367 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 427 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMSELQYGRIPELEKQLDLAAQAE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 487 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 541 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+ +GFD +YGA
Sbjct: 721 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDDALDLIAQVGFDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|52425838|ref|YP_088975.1| ClpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307890|gb|AAU38390.1| ClpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 856
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/706 (59%), Positives = 557/706 (78%), Gaps = 14/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTERAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +LKE++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERLKAVLKELAQEEGKVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+KRL +++KE+++ E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLDRRIIQLKLEQQALKKEEDEASRKRLDMLEKELSEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG + LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGTQHIKAELESARTQMEQARRAGDLNKMSELQYGTIPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + +LL+ +V EEIA+++SR TGIPVS++++ E+EKLL +E L K
Sbjct: 515 AADSAE------GKEMSLLRNRVTDEEIAQVLSRATGIPVSRMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +
Sbjct: 569 RVIGQGEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDDENA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + E +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQENKDLGYEGMKEIVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA IQL L ++ + + S+ L IS +G+D
Sbjct: 749 RPEFINRIDETVVFHPLAKENIKAIAQIQLARLTKRMEQHGYAINFSETLLDFISEVGYD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
+YGAR + K+++ + ++P A I G L+ P ++D
Sbjct: 809 PVYGARPL---KRAIQQEI-----ENPLAQQILSGKLLPAKPVTVD 846
>gi|329122865|ref|ZP_08251437.1| chaperone protein ClpB [Haemophilus aegyptius ATCC 11116]
gi|327472129|gb|EGF17567.1| chaperone protein ClpB [Haemophilus aegyptius ATCC 11116]
Length = 856
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKEESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|399006617|ref|ZP_10709140.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM17]
gi|398121933|gb|EJM11544.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM17]
Length = 854
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/666 (63%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEKLQEEITRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGQSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVSTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID++++F L R I I IQL L+ +L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELKLELSGEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|258624749|ref|ZP_05719683.1| clpB protein [Vibrio mimicus VM603]
gi|258583036|gb|EEW07851.1| clpB protein [Vibrio mimicus VM603]
Length = 857
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 540/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDDALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|147675005|ref|YP_001216203.1| clpB protein [Vibrio cholerae O395]
gi|227117086|ref|YP_002818982.1| clpB protein [Vibrio cholerae O395]
gi|262170007|ref|ZP_06037697.1| ClpB protein [Vibrio cholerae RC27]
gi|146316888|gb|ABQ21427.1| clpB protein [Vibrio cholerae O395]
gi|227012536|gb|ACP08746.1| clpB protein [Vibrio cholerae O395]
gi|262021741|gb|EEY40452.1| ClpB protein [Vibrio cholerae RC27]
Length = 857
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|153829376|ref|ZP_01982043.1| clpB protein, partial [Vibrio cholerae 623-39]
gi|148875159|gb|EDL73294.1| clpB protein [Vibrio cholerae 623-39]
Length = 839
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|88707050|ref|ZP_01104746.1| Chaperone clpB [Congregibacter litoralis KT71]
gi|88698700|gb|EAQ95823.1| Chaperone clpB [Congregibacter litoralis KT71]
Length = 862
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/668 (63%), Positives = 547/668 (81%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+AR GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALEKYTIDLTERARDGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQR+INGEVP L K+IL LD+ LLAGTK+RGEFE+RLK +L E+S + +I
Sbjct: 213 IVEGLAQRVINGEVPEGLRDKRILSLDLGALLAGTKFRGEFEERLKALLNELSKEEGRVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQY+EKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRQYVEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 333 KVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAAAQLSQRYITDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKIE EA++++ DES+ K+L L+ ++I +E +
Sbjct: 393 DEAASRIRMEIDSKPEALDRLERRLIQLKIEREAVRKDEDESATKQLALLDEQITAIEKE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+A+LE+IWK EK ++ + +K +IE+++L + A R D +S+L+YG+L +LE+ L
Sbjct: 453 FADLEEIWKAEKASLQGAASVKSDIEQLKLDLETARRAGDLTRMSELQYGKLPELEKQLA 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ Q N + TLL+ KV EE+AE+VSR TGIP+SK+++ +R+KLL +E+ L
Sbjct: 513 QA-----QAAENVER-TLLRNKVTDEEVAEVVSRWTGIPISKMLEGDRDKLLRMEDALHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++E++
Sbjct: 567 RVVGQDEAVVAVANAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTELCKALADFLFDSEQA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDEIEKA+ DVFN
Sbjct: 627 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDEIEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E+ GD+ + +K AVM V
Sbjct: 687 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEL-AGDQNYDAMKAAVMGVVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINR+D+ +VF L ++ I IA IQL L+ +L + M L I+ A + ++ G
Sbjct: 746 HFRPEFINRVDETVVFHPLLQEQIRGIATIQLAGLRARLGEREMALDITDAFMDQLVEGG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|153820387|ref|ZP_01973054.1| chaperone ClpB [Vibrio cholerae NCTC 8457]
gi|126509069|gb|EAZ71663.1| chaperone ClpB [Vibrio cholerae NCTC 8457]
Length = 697
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/661 (61%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
++K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 1 MEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 60
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 61 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 120
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 121 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 180
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 181 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 240
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 241 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 300
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 301 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 360
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L KRV+GQ
Sbjct: 361 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQK 414
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 415 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 474
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 475 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 534
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 535 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 594
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 595 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 654
Query: 673 R 673
R
Sbjct: 655 R 655
>gi|114561854|ref|YP_749367.1| ATPase [Shewanella frigidimarina NCIMB 400]
gi|114333147|gb|ABI70529.1| ATPase AAA-2 domain protein [Shewanella frigidimarina NCIMB 400]
Length = 865
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/661 (61%), Positives = 539/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 169 LKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 228
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I+FIDEL
Sbjct: 229 QRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLNELSQEEGQVILFIDEL 288
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQK++V+E
Sbjct: 289 HTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVIVDE 348
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RYISDR +PDKAIDLIDEAA+
Sbjct: 349 PSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYISDRKLPDKAIDLIDEAASS 408
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE++D+LERR IQLK+E +A+ +E DE+S+KRL ++ E+ +E K A + +
Sbjct: 409 IRMQIDSKPEVLDRLERRAIQLKLEEQALSKESDEASRKRLEFLQHELRDVESKAAEMNE 468
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + +Q IK ++E+ R+ + A R D +S+L+YG + +LE+ L SQ +
Sbjct: 469 IWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLDLASQAE 528
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q TLL+ KV EIAE++S+ TGIPVSK+++ EREKLL++E L +RV+GQ+
Sbjct: 529 MQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLEGEREKLLHMETALHERVIGQN 582
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L+ +F++E +++RIDM
Sbjct: 583 EAVDAVSNAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSLAKFLFDSESALVRIDM 642
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 643 SEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 702
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E E +K VMN V FRPEF+
Sbjct: 703 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEGFGHTSYEEMKAGVMNVVTQSFRPEFL 762
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L+ +NI IA+IQ +L+ +L++ D+++S AAL I+ GFD +YGA
Sbjct: 763 NRIDESVVFHPLDAENIKHIASIQFELLRKRLIEKEFDIELSDAALSLIAEAGFDPVYGA 822
Query: 673 R 673
R
Sbjct: 823 R 823
>gi|419840223|ref|ZP_14363619.1| ATP-dependent chaperone protein ClpB [Haemophilus haemolyticus
HK386]
gi|386908044|gb|EIJ72743.1| ATP-dependent chaperone protein ClpB [Haemophilus haemolyticus
HK386]
Length = 856
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L +
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|325273285|ref|ZP_08139562.1| ATP-dependent chaperone ClpB [Pseudomonas sp. TJI-51]
gi|324101570|gb|EGB99139.1| ATP-dependent chaperone ClpB [Pseudomonas sp. TJI-51]
Length = 854
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELEAARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLKMEALLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQGEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|262172214|ref|ZP_06039892.1| ClpB protein [Vibrio mimicus MB-451]
gi|449144154|ref|ZP_21774971.1| chaperone ClpB [Vibrio mimicus CAIM 602]
gi|261893290|gb|EEY39276.1| ClpB protein [Vibrio mimicus MB-451]
gi|449080254|gb|EMB51171.1| chaperone ClpB [Vibrio mimicus CAIM 602]
Length = 857
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 540/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDDALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|160871680|ref|ZP_02061812.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|160872386|ref|ZP_02062518.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|159120479|gb|EDP45817.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|159121185|gb|EDP46523.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
Length = 868
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/665 (63%), Positives = 541/665 (81%), Gaps = 10/665 (1%)
Query: 12 GYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEG 71
G L+KYTIDLT +A GKLDPVIGRDD IRR IQVLQRR+KNNPVLIGEPGVGKTA+VEG
Sbjct: 160 GALEKYTIDLTTQASQGKLDPVIGRDDVIRRTIQVLQRRTKNNPVLIGEPGVGKTAVVEG 219
Query: 72 LAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFID 131
LAQRI+N EVP L +K++L LDI L+AG KYRGEFE+RLK +L E++ + II+FID
Sbjct: 220 LAQRIVNHEVPEGLRNKRLLALDIGSLIAGAKYRGEFEERLKAVLNELAKQEGQIILFID 279
Query: 132 ELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILV 191
ELHTM+G GK EG++DAGNMLKP L+RG+LHCIGATTLNEYR YIEKDAA ERRFQKILV
Sbjct: 280 ELHTMVGAGKAEGAMDAGNMLKPALARGQLHCIGATTLNEYRNYIEKDAALERRFQKILV 339
Query: 192 EEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAA 251
+EP++E+TI+ILRGL+++YE+HHGVEI D AIVAA+ LS+RYISDR +PDKAIDLIDEAA
Sbjct: 340 DEPNVEDTIAILRGLKQRYEIHHGVEIMDSAIVAAATLSHRYISDRNLPDKAIDLIDEAA 399
Query: 252 AKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANL 311
++I+IEIDSKPE +D+L+RRLIQLKIE EA+K+E DESSK RL + EI +L KYA+L
Sbjct: 400 SRIRIEIDSKPEKLDRLDRRLIQLKIEREALKKETDESSKIRLKNLDNEITELSKKYADL 459
Query: 312 EKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLER--ILKEK 369
+IWK EK ++ Q+IK E+EK + ++ KA R D +S+L+YG + LE+ + +K
Sbjct: 460 NEIWKAEKATLQGEQKIKSELEKAQFELEKARRSGDLNRMSELQYGHIPALEKKLVAAQK 519
Query: 370 SQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRV 429
+K Q P L++ KV +EIAEIVS+ TGIPV+K+++ EREKLL +E+ L KRV
Sbjct: 520 IEKKEQ-P------ALIRNKVSEKEIAEIVSQWTGIPVAKMLEGEREKLLQMEDALHKRV 572
Query: 430 VGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESII 489
VGQDEAIS V+NAIRRSR+GLSD RP GSF+F GPTGVGKTE+CK L+ +F+++E+++
Sbjct: 573 VGQDEAISVVANAIRRSRAGLSDPNRPIGSFIFSGPTGVGKTEVCKALAGFLFDSDEAMV 632
Query: 490 RIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNIL 549
R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDEIEKA++DVFNIL
Sbjct: 633 RLDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEIEKAHADVFNIL 692
Query: 550 LQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFR 608
LQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS I+E K D +K +M+ + +FR
Sbjct: 693 LQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSQIIQEFTSKQDYAALKSTLMDIIAQHFR 752
Query: 609 PEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDL 668
PEFINR+D+++VF LN I SI IQL L+ +L + ++ L++S+AA+ I+ +G+D
Sbjct: 753 PEFINRVDEVVVFHALNETQIHSITKIQLQRLRQRLGERDLHLEVSEAAINHIAKMGYDP 812
Query: 669 IYGAR 673
+YGAR
Sbjct: 813 VYGAR 817
>gi|27363946|ref|NP_759474.1| ATP-dependent chaperone ClpB [Vibrio vulnificus CMCP6]
gi|54035847|sp|Q8DEV2.1|CLPB_VIBVU RecName: Full=Chaperone protein ClpB
gi|27360063|gb|AAO09001.1| ATP-dependent chaperone ClpB [Vibrio vulnificus CMCP6]
Length = 857
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 538/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + +E+N+ E ++A LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSLNEELNEKEREFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 IWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLLK KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIKEQVMEVVTKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L + +I SIA IQLN L N++ + L++S AL+ I+ +GFD +YGA
Sbjct: 755 NRVDETVVFHPLGQDHIKSIAAIQLNRLANRMEEHGYPLEVSDKALELIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|421342009|ref|ZP_15792416.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43B1]
gi|395945512|gb|EJH56177.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43B1]
Length = 823
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 127 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 187 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 247 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 307 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 367 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 427 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 487 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 541 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 721 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|219870451|ref|YP_002474826.1| ATP-dependent Clp protease subunit B [Haemophilus parasuis SH0165]
gi|219690655|gb|ACL31878.1| ATP-dependent Clp protease chain B/ATPases with chaperone activity,
ATP-binding subunit [Haemophilus parasuis SH0165]
Length = 857
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 552/667 (82%), Gaps = 5/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +++ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEDLTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L+
Sbjct: 453 YAELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLQ 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L K
Sbjct: 513 EAVKREEEGGEN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQSEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E E + +K VMN V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENAENMSYDEMKTIVMNVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L+++NI +IA IQL L ++ + ++ ++ AA+ I GF
Sbjct: 749 FRPEFINRIDETVVFHPLDKENIRAIARIQLERLIKRMAERGYEVTVTDAAVDHIGEAGF 808
Query: 667 DLIYGAR 673
D ++GAR
Sbjct: 809 DPLFGAR 815
>gi|386719694|ref|YP_006186020.1| clpB protein [Stenotrophomonas maltophilia D457]
gi|384079256|emb|CCH13854.1| ClpB protein [Stenotrophomonas maltophilia D457]
Length = 861
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/706 (59%), Positives = 558/706 (79%), Gaps = 24/706 (3%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ N+ II
Sbjct: 215 IVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL ++ +I+ LE +
Sbjct: 395 DEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADLENDIDGLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL- 366
+++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG L +LE+ L
Sbjct: 455 FSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMSEIQYGLLPQLEKQLA 514
Query: 367 --KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
+E KD F L++ +V EEIAE+VSR TGIPV+K+++ ER+KLL +E +
Sbjct: 515 AAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEV 565
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++
Sbjct: 566 LHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDS 625
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ D
Sbjct: 626 ADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPD 685
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D +K AVM
Sbjct: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVM 745
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + + L +S AA
Sbjct: 746 GVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLKLAVSDAAFDL 805
Query: 661 ISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
+ N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 806 LGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQQILSGAFVN 843
>gi|54035866|sp|Q8PHQ4.2|CLPB_XANAC RecName: Full=Chaperone protein ClpB
Length = 861
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/672 (61%), Positives = 544/672 (80%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLETDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ +L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 455 FYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 510
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 511 ----KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 567 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 627 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 746
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 747 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 806
Query: 662 SNIGFDLIYGAR 673
++GFD +YGAR
Sbjct: 807 GSVGFDPVYGAR 818
>gi|422916499|ref|ZP_16950837.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-02A1]
gi|423817409|ref|ZP_17715440.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55C2]
gi|423996921|ref|ZP_17740184.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-02C1]
gi|424015624|ref|ZP_17755471.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55B2]
gi|424020734|ref|ZP_17760514.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59B1]
gi|424628600|ref|ZP_18066905.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-51A1]
gi|424632634|ref|ZP_18070750.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-52A1]
gi|443528620|ref|ZP_21094654.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-78A1]
gi|341640132|gb|EGS64727.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-02A1]
gi|408020657|gb|EKG57947.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-52A1]
gi|408058575|gb|EKG93367.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-51A1]
gi|408636632|gb|EKL08769.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55C2]
gi|408854299|gb|EKL94063.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-02C1]
gi|408861789|gb|EKM01356.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55B2]
gi|408866599|gb|EKM05979.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59B1]
gi|443453194|gb|ELT17027.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-78A1]
Length = 857
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|262163882|ref|ZP_06031621.1| ClpB protein [Vibrio mimicus VM223]
gi|262027410|gb|EEY46076.1| ClpB protein [Vibrio mimicus VM223]
Length = 823
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/661 (61%), Positives = 540/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 127 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 187 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 247 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 307 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 367 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 427 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMSELQYGRIPELEKQLDLAAQAE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 487 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 541 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+ +GFD +YGA
Sbjct: 721 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDDALDLIAQVGFDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|240949095|ref|ZP_04753443.1| ATP-dependant Clp protease chain B [Actinobacillus minor NM305]
gi|240296490|gb|EER47122.1| ATP-dependant Clp protease chain B [Actinobacillus minor NM305]
Length = 857
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/706 (58%), Positives = 564/706 (79%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+AR GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERARAGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTAKERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+ + +A R+S+ + + +L+YG++ LE+ L+
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIALEQARRESNLEKMGELQYGKIPALEKQLQ 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + +N LL+TKV EEIAE++S+ TGIPVSK+++ E++KLL +EN+L
Sbjct: 513 EAVKREEEGGDN----HLLRTKVTDEEIAEVLSKATGIPVSKMIEGEKDKLLRMENVLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+EM +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPNASYGELKEVVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L +++I SIA IQL L ++ + ++ I+ AA+ I GFD
Sbjct: 749 RPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRMAERGYEVTITDAAIDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVVD 846
>gi|421323615|ref|ZP_15774143.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1041(14)]
gi|424594310|ref|ZP_18033648.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1040(13)]
gi|395922830|gb|EJH33645.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1041(14)]
gi|408036905|gb|EKG73321.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1040(13)]
Length = 857
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/661 (61%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTKRAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|68249453|ref|YP_248565.1| ClpB [Haemophilus influenzae 86-028NP]
gi|386266414|ref|YP_005829906.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
R2846]
gi|68057652|gb|AAX87905.1| ClpB [Haemophilus influenzae 86-028NP]
gi|309973650|gb|ADO96851.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
R2846]
Length = 856
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|390989198|ref|ZP_10259497.1| ATP-dependent chaperone ClpB [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372555956|emb|CCF66472.1| ATP-dependent chaperone ClpB [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 859
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/672 (61%), Positives = 544/672 (80%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 213 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 333 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL ++ +I+KLE +
Sbjct: 393 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLETDIDKLERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ +L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 453 FYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 508
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 509 ----KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 564
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 565 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 624
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 625 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 684
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 685 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 744
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 745 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 804
Query: 662 SNIGFDLIYGAR 673
++GFD +YGAR
Sbjct: 805 GSVGFDPVYGAR 816
>gi|223041973|ref|ZP_03612157.1| chaperone ClpB [Actinobacillus minor 202]
gi|223017230|gb|EEF15658.1| chaperone ClpB [Actinobacillus minor 202]
Length = 857
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/706 (58%), Positives = 563/706 (79%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+AR GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERARAGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTAKERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+ + +A R+S+ + + +L+YG++ LE+ L+
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIALEQARRESNLEKMGELQYGKIPALEKQLQ 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + +N LL+TKV EEIAE++S+ TGIPVSK+++ E++KLL +EN+L
Sbjct: 513 EAVKREEEGGDN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKDKLLRMENVLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+EM +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPNASYGELKEVVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L +++I SIA IQL L ++ + ++ I+ AA+ I GFD
Sbjct: 749 RPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRMAERGYEVTITDAAIDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
+GAR + K+++ L ++P A I G L+ P +D
Sbjct: 809 PFFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNKPVVVD 846
>gi|109897662|ref|YP_660917.1| ATPase [Pseudoalteromonas atlantica T6c]
gi|109699943|gb|ABG39863.1| ATPase AAA-2 [Pseudoalteromonas atlantica T6c]
Length = 858
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/702 (59%), Positives = 563/702 (80%), Gaps = 13/702 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG+PGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGQPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KRL LI+ E + EIK++ LEK
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKRLELIEIEREQAEIKFSELEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q I+ E+++ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSELQYGRIPELESKLELATESE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + LLK +V EIA+++SR TGIPVSK+++ E++KL+++E L +RVVGQ
Sbjct: 521 SQ----PLEHQLLKNRVTESEIADVLSRWTGIPVSKMLEGEKDKLMSMEAALHERVVGQS 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLANFLFDTEDAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D E +K +V+N + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDYEKMKQSVLNVLSTHFRPEFL 756
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L I SIA+ QL L+N+L + + L+++ AALKKI+ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLAQITSIASKQLQFLRNRLEEKGIGLELTDAALKKIAEAGFDPVYGA 816
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
R + K+++ + + ++P A I G L+++G S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLVSEGVVSIDA 850
>gi|424790554|ref|ZP_18217088.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422797974|gb|EKU26148.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 861
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/670 (61%), Positives = 546/670 (81%), Gaps = 10/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRGRRVLSLDMGALIAGAKFRGEFEERLKGVLNDLSKTEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIADRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KL+ +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLQRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L+++W+ EK ++ + +IKE+IE+ R+++ A R+ D+ +S+++YG L LE+ L
Sbjct: 455 FSDLDEVWRSEKATLQGATRIKEQIEQARVELEAAQRRQDYAKMSEIQYGLLPNLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + F L++ +V +EEIAE+VSR TGIPV+++++ ER+KLL +E+ L +
Sbjct: 515 AAGDAE------HHDFKLVQDRVTAEEIAEVVSRWTGIPVNRMLEGERDKLLRMEDELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++ E+
Sbjct: 569 RVVGQQEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+SDVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI---IKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E +K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+DDI+VF L++ I SIA IQL L +L + + +++S AL+ + N
Sbjct: 749 QAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLGGLDKRLAERGLKIELSDRALELLGN 808
Query: 664 IGFDLIYGAR 673
+GFD +YGAR
Sbjct: 809 VGFDPVYGAR 818
>gi|424669901|ref|ZP_18106926.1| chaperone ClpB [Stenotrophomonas maltophilia Ab55555]
gi|401071972|gb|EJP80483.1| chaperone ClpB [Stenotrophomonas maltophilia Ab55555]
Length = 861
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/706 (59%), Positives = 558/706 (79%), Gaps = 24/706 (3%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ N+ II
Sbjct: 215 IVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL ++ +I+ LE +
Sbjct: 395 DEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADLENDIDGLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL- 366
+++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG L +LE+ L
Sbjct: 455 FSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMSEIQYGLLPQLEKQLA 514
Query: 367 --KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
+E KD F L++ +V EEIAE+VSR TGIPV+K+++ ER+KLL +E +
Sbjct: 515 AAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEV 565
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++
Sbjct: 566 LHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDS 625
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ D
Sbjct: 626 ADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPD 685
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D +K AVM
Sbjct: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVM 745
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + + L +S AA
Sbjct: 746 GVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLKLAVSDAAFDL 805
Query: 661 ISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
+ N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 806 LGNVGFDPVYGARPL---KRAIQSQL-----ENPLAQQILSGAFVN 843
>gi|419829326|ref|ZP_14352814.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-1A2]
gi|419832128|ref|ZP_14355593.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-61A2]
gi|423849446|ref|ZP_17719228.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59A1]
gi|423879099|ref|ZP_17722834.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-60A1]
gi|408621960|gb|EKK94952.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-1A2]
gi|408643807|gb|EKL15524.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-60A1]
gi|408644845|gb|EKL16519.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59A1]
gi|408652029|gb|EKL23268.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-61A2]
Length = 823
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 127 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 187 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 247 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 307 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 367 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 427 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 487 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 541 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 721 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|307250341|ref|ZP_07532290.1| hypothetical protein appser4_11220 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307254986|ref|ZP_07536804.1| hypothetical protein appser9_12200 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259422|ref|ZP_07541147.1| hypothetical protein appser11_12190 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306857616|gb|EFM89723.1| hypothetical protein appser4_11220 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861859|gb|EFM93835.1| hypothetical protein appser9_12200 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866358|gb|EFM98221.1| hypothetical protein appser11_12190 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 857
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/706 (58%), Positives = 566/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLH 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AAL I GFD
Sbjct: 749 RPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAALDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P + I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVVD 846
>gi|407692736|ref|YP_006817525.1| ATP-dependent Clp protease subunit B [Actinobacillus suis H91-0380]
gi|407388793|gb|AFU19286.1| ATP-dependent Clp protease subunit B [Actinobacillus suis H91-0380]
Length = 857
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/706 (58%), Positives = 565/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+S+++ +S+L+YG++ LE+ L
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELEYARIEMDQARRESNFEKMSELQYGKIPALEKQLA 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F + ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFEDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYASMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L +++I +IA IQL L +L + ++ ++ AL I GFD
Sbjct: 749 RPEFINRIDETVVFHPLGQEHIRAIARIQLQRLIARLAERGYEVTVTDNALDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVVD 846
>gi|165918374|ref|ZP_02218460.1| ATP-dependent chaperone ClpB [Coxiella burnetii Q321]
gi|165917880|gb|EDR36484.1| ATP-dependent chaperone ClpB [Coxiella burnetii Q321]
Length = 859
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/701 (61%), Positives = 567/701 (80%), Gaps = 12/701 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLTEKA GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LAKYTIDLTEKAETGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +LK+I+ + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERLKAVLKDIAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+ I+ILRGL+++YEVHHGVEITDPAI+AA+ LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQRYITDRNLPDKAIDLIDEAASQ 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKP +D+LERRLIQLKIE EA+K+E DE+SKKRL ++ EI +E +Y++LE+
Sbjct: 401 IRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASKKRLSDLETEIKNVEKEYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +QQIKEE+E+ R+++ A R D +S+L+YG + +L++ LK SQK+
Sbjct: 461 VWKSEKASLHGTQQIKEELEQARIELEAAGRAGDLARMSELQYGIIPELDKKLKAASQKE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q ++ LL+++V EE+AE+VS+ T IPVSK+++ EREKLL++E L KRV+GQD
Sbjct: 521 EQFHDH----KLLRSRVTEEEVAEVVSKWTHIPVSKMLEGEREKLLHMETELHKRVIGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+A +F+ E++++RIDM
Sbjct: 577 EAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTELCKALAAFLFDTEDAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYS+ILLDEIEKA++DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHNDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+IVMTSNLGSD I+E + + +K AVM V +FRPEFIN
Sbjct: 697 DDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGENYDKMKDAVMEVVAQHFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L ++ I +IA IQ++ +K +L + + L IS AL +S +G+D +YGAR
Sbjct: 757 RIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLTISDDALDYLSELGYDPVYGAR 816
Query: 674 DVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN---KGPQ 710
+ K+ L L+ + +K E F+ G LIN KG Q
Sbjct: 817 PL---KRVLQQQLENPLSQKILEGKFV-PGSLINIEKKGEQ 853
>gi|148545915|ref|YP_001266017.1| ATPase [Pseudomonas putida F1]
gi|148509973|gb|ABQ76833.1| ATPase AAA-2 domain protein [Pseudomonas putida F1]
Length = 854
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|21243921|ref|NP_643503.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citri str. 306]
gi|21109529|gb|AAM38039.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citri str. 306]
Length = 871
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/672 (61%), Positives = 544/672 (80%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 165 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 224
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 225 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 284
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 285 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 344
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 345 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 404
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL ++ +I+KLE +
Sbjct: 405 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLETDIDKLERE 464
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ +L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 465 FYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 520
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 521 ----KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 576
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 577 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 636
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 637 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 696
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 697 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 756
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 757 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 816
Query: 662 SNIGFDLIYGAR 673
++GFD +YGAR
Sbjct: 817 GSVGFDPVYGAR 828
>gi|320157323|ref|YP_004189702.1| ClpB protein [Vibrio vulnificus MO6-24/O]
gi|319932635|gb|ADV87499.1| ClpB protein [Vibrio vulnificus MO6-24/O]
Length = 857
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 537/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + +E+N+ E ++A LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSLNEELNEKEREFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 IWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLLK KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIKEQVMEVVTKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L + +I SIA IQL L N++ + L++S AL+ I+ +GFD +YGA
Sbjct: 755 NRVDETVVFHPLGQDHIKSIAAIQLKRLANRMEEHGYQLEVSDKALELIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|421502047|ref|ZP_15949003.1| ATPase [Pseudomonas mendocina DLHK]
gi|400347331|gb|EJO95685.1| ATPase [Pseudomonas mendocina DLHK]
Length = 854
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKDKRLLSLDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL+ ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLVKLEEDIAKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI++ IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQRIEQAKTELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLKMEGLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GDKE + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDKEAQRAAVMDAVSSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L+++ AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRGRLAERELSLELTPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|444921257|ref|ZP_21241094.1| Chaperone protein ClpB [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507616|gb|ELV07791.1| Chaperone protein ClpB [Wohlfahrtiimonas chitiniclastica SH04]
Length = 867
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/696 (61%), Positives = 558/696 (80%), Gaps = 18/696 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYT+DLT++A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 154 EENRQALSKYTVDLTKRAEEGKLDPVIGRDDEIRRCIQVLSRRTKNNPVLIGEPGVGKTA 213
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I+EGLAQRI+NGEVP L +K +L LD+ L+AG K+RGEFE+RLK +L E+ II
Sbjct: 214 IIEGLAQRIVNGEVPEGLKNKSVLSLDMGALIAGAKFRGEFEERLKAVLNELGKQDGRII 273
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGNMLKP LSRGELHCIGATTL+EYRQYIEKD A ERRFQ
Sbjct: 274 LFIDEIHTMVGAGKGDGAMDAGNMLKPALSRGELHCIGATTLDEYRQYIEKDPALERRFQ 333
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
++LV+EP +E+TI+ILRGL+++YE+HHGVEITDPAIVAA+ LS RYI+DR +PDKAIDLI
Sbjct: 334 RVLVDEPTVEDTIAILRGLKERYEIHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLI 393
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE MDKL+RRLIQLKIE EAIK+E D++SKKRL ++++EI L +
Sbjct: 394 DEAASLVRMEIDSKPEEMDKLDRRLIQLKIEREAIKKEKDDASKKRLEILEQEIEDLSKE 453
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE++WK EK++++ + IKE++EK R ++ A R D +S+L+YG + +LE LK
Sbjct: 454 YSDLEEVWKKEKSVMQGATSIKEDLEKARNEMEAARRSGDLAKMSELQYGRIPELEAQLK 513
Query: 368 E--KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
E ++ D++ N L++T V SEEIAEIVS+ TGIPV+++++ EREKLL++E+ L
Sbjct: 514 EAQANEGDVERKNQ-----LVRTNVTSEEIAEIVSKWTGIPVTRMLEGEREKLLHMESFL 568
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+V+GQ EAISAVS+A+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F++E
Sbjct: 569 ANQVIGQKEAISAVSDAVRRSRAGLSDPNRPIGSFLFLGPTGVGKTELTKALANFLFDSE 628
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DV
Sbjct: 629 AAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 688
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--------EKGDKEIIKL 597
FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+E EK E IK
Sbjct: 689 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSSIIQEQTHALSNMDEKDQYEAIKA 748
Query: 598 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 657
+VM+ V +FRPEFINRIDDI+VF LN++NI SIA +Q++ + +L ++L I+ A
Sbjct: 749 SVMDVVGQHFRPEFINRIDDIVVFHPLNKENIRSIAKLQVDRVIKRLADQEIELAITDGA 808
Query: 658 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKS 693
L ++ +G+D ++GAR + K+++ I L+ KS
Sbjct: 809 LDELGEVGYDPVFGARPL---KRAIQIHLENPLAKS 841
>gi|424658578|ref|ZP_18095835.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-16]
gi|408054712|gb|EKG89675.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-16]
Length = 823
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 127 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 187 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 247 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 307 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 367 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 427 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 487 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 541 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDIVSKHFRPEFL 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 721 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYPLEVDDEALDLIAHVGFDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|145629931|ref|ZP_01785713.1| hypothetical protein CGSHi22421_07768 [Haemophilus influenzae
R3021]
gi|229844737|ref|ZP_04464876.1| ClpB [Haemophilus influenzae 6P18H1]
gi|144984212|gb|EDJ91635.1| hypothetical protein CGSHi22421_07768 [Haemophilus influenzae
R3021]
gi|229812451|gb|EEP48141.1| ClpB [Haemophilus influenzae 6P18H1]
Length = 856
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPDLEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|422909223|ref|ZP_16943874.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-09]
gi|341635611|gb|EGS60321.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-09]
Length = 857
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDIVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYPLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|417841857|ref|ZP_12487955.1| Chaperone protein ClpB [Haemophilus haemolyticus M19501]
gi|341948231|gb|EGT74862.1| Chaperone protein ClpB [Haemophilus haemolyticus M19501]
Length = 856
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++D+FN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADIFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|77461055|ref|YP_350562.1| chaperone clpB [Pseudomonas fluorescens Pf0-1]
gi|77385058|gb|ABA76571.1| chaperone [Pseudomonas fluorescens Pf0-1]
Length = 854
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +++EI++ E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIDRHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSMQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+N+L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRNRLAERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|190575587|ref|YP_001973432.1| heat shock chaperone ClpB [Stenotrophomonas maltophilia K279a]
gi|190013509|emb|CAQ47144.1| putative heat shock chaperone ClpB [Stenotrophomonas maltophilia
K279a]
Length = 861
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/706 (59%), Positives = 558/706 (79%), Gaps = 24/706 (3%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ N+ II
Sbjct: 215 IVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL ++ +I+ LE +
Sbjct: 395 DEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADLENDIDGLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL- 366
+++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG L +LE+ L
Sbjct: 455 FSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMSEIQYGLLPQLEKQLA 514
Query: 367 --KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
+E KD F L++ +V EEIAE+VSR TGIPV+K+++ ER+KLL +E +
Sbjct: 515 AAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEV 565
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++
Sbjct: 566 LHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDS 625
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ D
Sbjct: 626 ADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPD 685
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D +K AVM
Sbjct: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVM 745
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + + L +S AA
Sbjct: 746 GVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLKLAVSDAAFDL 805
Query: 661 ISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
+ N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 806 LGNVGFDPVYGARPL---KRAIQSQL-----ENPLAQQILSGAFVN 843
>gi|16272799|ref|NP_439019.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
Rd KW20]
gi|1168973|sp|P44403.1|CLPB_HAEIN RecName: Full=Chaperone protein ClpB
gi|1573874|gb|AAC22518.1| ATP-dependent Clp protease, ATPase subunit (clpB) [Haemophilus
influenzae Rd KW20]
Length = 856
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPDLEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|456734399|gb|EMF59215.1| ClpB protein [Stenotrophomonas maltophilia EPM1]
Length = 859
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/706 (59%), Positives = 558/706 (79%), Gaps = 24/706 (3%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ N+ II
Sbjct: 213 IVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKNEGQII 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 333 KVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL ++ +I+ LE +
Sbjct: 393 DEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADLENDIDGLERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL- 366
+++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG L +LE+ L
Sbjct: 453 FSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMSEIQYGLLPQLEKQLA 512
Query: 367 --KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
+E KD F L++ +V EEIAE+VSR TGIPV+K+++ ER+KLL +E +
Sbjct: 513 AAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEV 563
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++
Sbjct: 564 LHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDS 623
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ D
Sbjct: 624 ADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPD 683
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D +K AVM
Sbjct: 684 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVM 743
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + + L +S AA
Sbjct: 744 GVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLKLAVSDAAFDL 803
Query: 661 ISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
+ N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 804 LGNVGFDPVYGARPL---KRAIQSQL-----ENPLAQQILSGAFVN 841
>gi|322514940|ref|ZP_08067954.1| chaperone protein ClpB [Actinobacillus ureae ATCC 25976]
gi|322119090|gb|EFX91247.1| chaperone protein ClpB [Actinobacillus ureae ATCC 25976]
Length = 864
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/706 (58%), Positives = 566/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 160 EETRQALQKYTIDLTERANAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 219
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 220 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 279
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 280 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 339
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 340 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 399
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 400 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 459
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+S+++ +S+L+YG++ LE+ L
Sbjct: 460 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRESNFEKMSELQYGKIPALEKQLA 519
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E++L
Sbjct: 520 EAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDVLHS 575
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 576 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 635
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 636 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 695
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E +++K VM V +F
Sbjct: 696 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENAYKGYDVVKTMVMEVVGQHF 755
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ ++F L +++I +IA IQL L +L + + ++ + AAL I GFD
Sbjct: 756 RPEFINRIDETVMFHSLGQEHIRAIARIQLQRLIARLAERDYEVTATDAALDHIGKAGFD 815
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 816 PLFGARPL---KRAIQQEL-----ENPLAQKILSGKLLPNSPVVVD 853
>gi|145632228|ref|ZP_01787963.1| DNA polymerase I [Haemophilus influenzae 3655]
gi|145634718|ref|ZP_01790426.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
PittAA]
gi|260579950|ref|ZP_05847780.1| ATP-dependent chaperone ClpB [Haemophilus influenzae RdAW]
gi|144987135|gb|EDJ93665.1| DNA polymerase I [Haemophilus influenzae 3655]
gi|145267884|gb|EDK07880.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
PittAA]
gi|260093234|gb|EEW77167.1| ATP-dependent chaperone ClpB [Haemophilus influenzae RdAW]
Length = 856
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPDLEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|285017507|ref|YP_003375218.1| ATP-dependent clp protease subunit protein [Xanthomonas albilineans
GPE PC73]
gi|283472725|emb|CBA15230.1| putative atp-dependent clp protease subunit protein [Xanthomonas
albilineans GPE PC73]
Length = 861
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/670 (61%), Positives = 548/670 (81%), Gaps = 10/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLT +A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALGKYTIDLTARAESGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIVNGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLSDLEADIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ +L+++WK EK ++ + +IKE+IE+ R+++ A R+ D+ +S+++YG L LE+ L
Sbjct: 455 FYDLDEVWKSEKAALQGATKIKEQIEQARVELEAAQRRQDYAKMSEIQYGLLPNLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + ++F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L +
Sbjct: 515 AANEAE------QHEFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++ ++
Sbjct: 569 RVVGQHEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+SDVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTESVRRRPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+DDI+VF L++ I +IA IQL+ L+ +L + + +++ AL+ + N
Sbjct: 749 QAHFRPEFINRLDDIVVFHPLDKAQIKAIARIQLHGLEKRLAERGLKIELGDRALELLGN 808
Query: 664 IGFDLIYGAR 673
+GFD +YGAR
Sbjct: 809 VGFDPVYGAR 818
>gi|395447027|ref|YP_006387280.1| ATPase [Pseudomonas putida ND6]
gi|388561024|gb|AFK70165.1| ATPase [Pseudomonas putida ND6]
Length = 831
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 132 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 191
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 192 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 251
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 252 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 311
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 312 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 371
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 372 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 431
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 432 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQYGVIPDLERSLQ 491
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 492 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 545
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 546 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 605
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 606 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 665
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 666 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 724
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 725 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 784
Query: 668 LIYGAR 673
+YGAR
Sbjct: 785 PVYGAR 790
>gi|167031687|ref|YP_001666918.1| ATP-dependent chaperone ClpB [Pseudomonas putida GB-1]
gi|166858175|gb|ABY96582.1| ATP-dependent chaperone ClpB [Pseudomonas putida GB-1]
Length = 854
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEALLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQGEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPDALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|384420306|ref|YP_005629666.1| chaperone ClpB [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353463219|gb|AEQ97498.1| chaperone ClpB [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 906
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/672 (62%), Positives = 545/672 (81%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 200 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 259
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S + II
Sbjct: 260 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKTEGQII 319
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 320 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 379
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 380 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 439
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL ++ +I+KLE +
Sbjct: 440 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLESDIDKLERE 499
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ +L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 500 FYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 555
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 556 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 611
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 612 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 671
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEFIEKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY+LILLDE+EKA++DV
Sbjct: 672 EAMIRIDMSEFIEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYALILLDEVEKAHADV 731
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI---IKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E +K AVM
Sbjct: 732 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQQIQELSGDGSAEAYTQMKAAVMG 791
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 792 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLRLDLDDAALELL 851
Query: 662 SNIGFDLIYGAR 673
N+GFD +YGAR
Sbjct: 852 GNVGFDPVYGAR 863
>gi|444428933|ref|ZP_21224219.1| hypothetical protein B878_23058 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444237842|gb|ELU49493.1| hypothetical protein B878_23058 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 857
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVLNDELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQA 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVLIMTSNLGSARIQENFATLDYQGIKNEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L +L + L++ + AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVPEKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|402306300|ref|ZP_10825350.1| ATP-dependent chaperone protein ClpB [Haemophilus sputorum HK 2154]
gi|400375371|gb|EJP28273.1| ATP-dependent chaperone protein ClpB [Haemophilus sputorum HK 2154]
Length = 858
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/706 (58%), Positives = 566/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE LKKYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 154 EETRQALKKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 213
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 214 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 273
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 274 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 333
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 334 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 393
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 394 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELAAKERE 453
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+ +++A R+++++ +S+L+YG++ LE+ L+
Sbjct: 454 YSELEEVWKAEKSALLGTQHIKTELENARIAMDQARRENNFEKMSELQYGKIPALEKQLQ 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 514 EAVKREEEGSEN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++ ++
Sbjct: 570 RVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFLFDDPDA 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 630 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + +K VM+ V +F
Sbjct: 690 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEAPEASYAEMKALVMSVVGQHF 749
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRIDD +VF L +++I +IA IQL L ++ + ++ ++ A+ I GFD
Sbjct: 750 RPEFINRIDDTVVFHPLGQEHIRAIARIQLERLIKRMAERGYEVTVTDDAIDHIGKAGFD 809
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 810 PLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVVD 847
>gi|417844398|ref|ZP_12490442.1| Chaperone protein ClpB [Haemophilus haemolyticus M21639]
gi|341956851|gb|EGT83267.1| Chaperone protein ClpB [Haemophilus haemolyticus M21639]
Length = 856
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELTEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK++++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQDLDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESYSEMKALVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|153207187|ref|ZP_01945966.1| ATP-dependent chaperone ClpB [Coxiella burnetii 'MSU Goat Q177']
gi|212219427|ref|YP_002306214.1| ClpB [Coxiella burnetii CbuK_Q154]
gi|120576848|gb|EAX33472.1| ATP-dependent chaperone ClpB [Coxiella burnetii 'MSU Goat Q177']
gi|212013689|gb|ACJ21069.1| ClpB [Coxiella burnetii CbuK_Q154]
Length = 859
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/701 (61%), Positives = 567/701 (80%), Gaps = 12/701 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLTEKA GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LAKYTIDLTEKAETGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L++I+ + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERLKAVLRDIAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+ I+ILRGL+++YEVHHGVEITDPAI+AA+ LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQRYITDRNLPDKAIDLIDEAASQ 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKP +D+LERRLIQLKIE EA+K+E DE+SKKRL ++ EI +E +Y++LE+
Sbjct: 401 IRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASKKRLSDLETEIKNVEKEYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +QQIKEE+E+ R+++ A R D +S+L+YG + +L++ LK SQK+
Sbjct: 461 VWKSEKASLHGTQQIKEELEQARIELEAAGRAGDLARMSELQYGIIPELDKKLKAASQKE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q ++ LL+++V EE+AE+VS+ T IPVSK+++ EREKLL++E L KRV+GQD
Sbjct: 521 EQFHDH----KLLRSRVTEEEVAEVVSKWTHIPVSKMLEGEREKLLHMETELHKRVIGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+A +F+ E++++RIDM
Sbjct: 577 EAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTELCKALAAFLFDTEDAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYS+ILLDEIEKA++DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHNDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+IVMTSNLGSD I+E + + +K AVM V +FRPEFIN
Sbjct: 697 DDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGENYDKMKDAVMEVVAQHFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L ++ I +IA IQ++ +K +L + + L IS AL +S +G+D +YGAR
Sbjct: 757 RIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLTISDDALDYLSELGYDPVYGAR 816
Query: 674 DVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN---KGPQ 710
+ K+ L L+ + +K E F+ G LIN KG Q
Sbjct: 817 PL---KRVLQQQLENPLSQKILEGKFV-PGSLINIEKKGEQ 853
>gi|145628239|ref|ZP_01784040.1| ClpB [Haemophilus influenzae 22.1-21]
gi|145638337|ref|ZP_01793947.1| ClpB [Haemophilus influenzae PittII]
gi|144980014|gb|EDJ89673.1| ClpB [Haemophilus influenzae 22.1-21]
gi|145272666|gb|EDK12573.1| ClpB [Haemophilus influenzae PittII]
gi|309751479|gb|ADO81463.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
R2866]
Length = 856
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 541/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|410626519|ref|ZP_11337280.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
mesophila KMM 241]
gi|410154058|dbj|GAC24049.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
mesophila KMM 241]
Length = 858
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/702 (59%), Positives = 563/702 (80%), Gaps = 13/702 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG+PGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGQPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KRL LI+ E + EIK++ LEK
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKRLELIEIEREQAEIKFSELEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q I+ E+++ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSELQYGRIPELESKLELATESE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + LLK +V EIA+++SR TGIPVSK+++ E++KL+++E L +RVVGQ
Sbjct: 521 SQ----PLEHQLLKNRVTESEIADVLSRWTGIPVSKMLEGEKDKLMSMETALHERVVGQS 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLANFLFDTEDAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+N++I+MTSNLGSD I+E + D E +K +V+N + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNSVIIMTSNLGSDIIQEQHSENDYEKMKQSVLNVLSTHFRPEFL 756
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L I SIA+ QL L+N+L + + L+++ AALKKI+ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLAQITSIASKQLQFLRNRLEEKGIGLELTDAALKKIAEAGFDPVYGA 816
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
R + K+++ + + ++P A I G L+++G S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLVSEGVVSIDA 850
>gi|146308654|ref|YP_001189119.1| ATPase [Pseudomonas mendocina ymp]
gi|145576855|gb|ABP86387.1| ATPase AAA-2 domain protein [Pseudomonas mendocina ymp]
Length = 854
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIVNGEVPDGLKDKRLLSLDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL+ ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLVKLEEDIAKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI++ IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQRIEQAKTELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLKMEGLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GDKE + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDKEAQRAAVMDAVSSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L+++ AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRGRLTERELSLELTPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|344208582|ref|YP_004793723.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia JV3]
gi|343779944|gb|AEM52497.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia JV3]
Length = 861
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/706 (59%), Positives = 559/706 (79%), Gaps = 24/706 (3%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ ++ II
Sbjct: 215 IVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKSEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL ++K+I+ LE +
Sbjct: 395 DEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADLEKDIDALERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL- 366
+++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG L +LE+ L
Sbjct: 455 FSDLNEIWKSEKAALQGATKIKEQVEQAKLELESAQRRQDFAKMSEIQYGLLPQLEKQLA 514
Query: 367 --KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
+E KD F L++ +V EEIAE+VSR TGIPV+K+++ ER+KLL +E +
Sbjct: 515 AAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEV 565
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++
Sbjct: 566 LHNRVVGQEEAIRVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDS 625
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ D
Sbjct: 626 ADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPD 685
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D +K AVM
Sbjct: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVM 745
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + + L +S AA
Sbjct: 746 GVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLKLMVSDAAFDL 805
Query: 661 ISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
+ N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 806 LGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFVN 843
>gi|342903657|ref|ZP_08725465.1| Chaperone protein ClpB [Haemophilus haemolyticus M21621]
gi|341954908|gb|EGT81377.1| Chaperone protein ClpB [Haemophilus haemolyticus M21621]
Length = 856
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 541/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELADKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|378697060|ref|YP_005179018.1| protein disaggregation chaperone [Haemophilus influenzae 10810]
gi|301169578|emb|CBW29179.1| protein disaggregation chaperone [Haemophilus influenzae 10810]
Length = 856
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 541/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPDLEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|421524703|ref|ZP_15971324.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida LS46]
gi|402751166|gb|EJX11679.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida LS46]
Length = 854
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida KT2440]
gi|54035836|sp|Q88Q71.1|CLPB_PSEPK RecName: Full=Chaperone protein ClpB
gi|24982014|gb|AAN66250.1|AE016253_5 ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida KT2440]
Length = 854
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 545/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|149377764|ref|ZP_01895497.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
algicola DG893]
gi|149357936|gb|EDM46425.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
algicola DG893]
Length = 858
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/700 (59%), Positives = 555/700 (79%), Gaps = 17/700 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KY IDLTE+A GKLDPVIGRDDEIRR IQVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALSKYAIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKSVLNELAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP LSRGELHC+GATTL+EYR+ IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGSMDAGNMLKPALSRGELHCVGATTLDEYRENIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP E+TI+ILRGL+++YEVHHGVE+TD AI+AA+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVSEPTEEDTIAILRGLKERYEVHHGVEVTDGAIIAAARLSHRYIADRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL + + I+ +E +
Sbjct: 395 DEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKKRLSELSEVISGIERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK + SQ+IK ++E+ R+ + A R D +S+L+YG++ +LER L
Sbjct: 455 YADLEEVWNTEKAALHGSQKIKSQLEQARIDLENARRAGDLGRMSELQYGQIPELERQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++ + LL+ +V EEIAE+VS+ TGIPVSK+++ ER+KL+ +E L
Sbjct: 515 MASQAEMM------EMKLLRNRVTDEEIAEVVSKWTGIPVSKMLEGERDKLMRMEEALHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 569 RVIGQDEAVEAVSNAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTELCKALASFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I++ + G++ E +K VM V
Sbjct: 689 ILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQ-KAGEENYEAMKSDVMAVVGT 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINR+D+++VF L I IA IQ++ L +L + +M L + AA++ ++ +G
Sbjct: 748 HFRPEFINRVDEVVVFHPLAESQIQGIARIQVDALGKRLKEQDMSLVLDDAAMELLAEVG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
+D +YGAR + K+++ ++ ++P A + GD +
Sbjct: 808 YDPVYGARPL---KRAIQRMI-----ENPLAQRLLQGDFL 839
>gi|451936301|ref|YP_007460155.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777224|gb|AGF48199.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 861
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/667 (62%), Positives = 543/667 (81%), Gaps = 2/667 (0%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DE + L KYT D+T AR KLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKT
Sbjct: 153 DESNRNALSKYTTDITSLARQCKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKT 212
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLAQRIIN EVP+SL K++L LD+A L+AG K+RGEFE+RLK +LK+IS + I
Sbjct: 213 AIVEGLAQRIINREVPDSLRDKRVLSLDLASLIAGAKFRGEFEERLKTVLKDISVDSNSI 272
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
+ FIDELHT++G GK EGSIDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRF
Sbjct: 273 L-FIDELHTIMGAGKAEGSIDAGNMLKPSLARGELHCIGATTLDEYRKYIEKDAALERRF 331
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QK++V+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS RYI+DRF+PDKAIDL
Sbjct: 332 QKVIVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSNRYITDRFLPDKAIDL 391
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEA A+I++EIDSKPE MDKLERR+IQLKIE EA+K+E DE SKKRL +I+ E+ K++
Sbjct: 392 IDEAGARIRMEIDSKPEAMDKLERRMIQLKIEREAVKKESDEVSKKRLYVIEDELKKIQE 451
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+Y + EKIWK EK +++ ++ IKEEI+ ++ K+ + R + +++L+Y +L +LE L
Sbjct: 452 EYNSYEKIWKSEKNIVEGTKNIKEEIDGLKAKMAELQRNGQYDLLAELQYSKLPELEEKL 511
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
K I ++ KF LL+T+VG+EEIAE+VS TGIPVSK++Q EREKLL++ + L
Sbjct: 512 KSAENYSINQSSD-KKFKLLRTQVGAEEIAEVVSVATGIPVSKMMQGEREKLLHMNDFLN 570
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
R++GQ EA+ AVS+AI R+R+GLSD RP GSF+FLGPTGVGKTEL K L+ +F++ +
Sbjct: 571 SRIIGQSEAVRAVSDAILRARAGLSDQSRPSGSFLFLGPTGVGKTELAKALADFMFDSRD 630
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVF
Sbjct: 631 HMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHLDVF 690
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
N+LLQ+LDDGRLTD+ GRT++FRNT+I+MTSNLGS+ I+ M + I+ +M E+K+
Sbjct: 691 NVLLQVLDDGRLTDSHGRTVDFRNTVIIMTSNLGSNHIQSMIDSTYDEIRKVLMEELKLT 750
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
RPEF+NRID+I+ F L + + SI IQ++ LK++L + NM ++IS A+ ++ GF
Sbjct: 751 LRPEFLNRIDEIVFFHSLKSEQMASIVKIQIDQLKDRLKQKNMHIEISNDAVSMLAKNGF 810
Query: 667 DLIYGAR 673
D+++GAR
Sbjct: 811 DIVFGAR 817
>gi|408822107|ref|ZP_11206997.1| ATP-dependent chaperone ClpB [Pseudomonas geniculata N1]
Length = 861
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/706 (59%), Positives = 558/706 (79%), Gaps = 24/706 (3%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ N+ II
Sbjct: 215 IVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL ++ +I+ LE +
Sbjct: 395 DEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADLENDIDGLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL- 366
+++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG L +LE+ L
Sbjct: 455 FSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMSEIQYGLLPQLEKQLA 514
Query: 367 --KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
+E KD F L++ +V EEIAE+VSR TGIPV+K+++ ER+KLL +E +
Sbjct: 515 AAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEV 565
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++
Sbjct: 566 LHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDS 625
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ D
Sbjct: 626 ADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPD 685
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D +K AVM
Sbjct: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSTDDSPEAYTQMKAAVM 745
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + + L +S AA
Sbjct: 746 GVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLKLMVSDAAFDL 805
Query: 661 ISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
+ N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 806 LGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFVN 843
>gi|145636576|ref|ZP_01792243.1| ClpB [Haemophilus influenzae PittHH]
gi|145270102|gb|EDK10038.1| ClpB [Haemophilus influenzae PittHH]
Length = 856
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 541/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELVEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|386010294|ref|YP_005928571.1| chaperone ClpB [Pseudomonas putida BIRD-1]
gi|313497000|gb|ADR58366.1| ClpB [Pseudomonas putida BIRD-1]
Length = 831
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 545/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 132 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 191
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 192 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 251
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 252 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 311
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 312 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 371
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 372 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 431
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 432 YSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 491
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 492 MVDQ------HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 545
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 546 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 605
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 606 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 665
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 666 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 724
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 725 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 784
Query: 668 LIYGAR 673
+YGAR
Sbjct: 785 PVYGAR 790
>gi|381395263|ref|ZP_09920967.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
punicea DSM 14233 = ACAM 611]
gi|379329072|dbj|GAB56100.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
punicea DSM 14233 = ACAM 611]
Length = 857
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/662 (62%), Positives = 536/662 (80%), Gaps = 9/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKYTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGSLLAGAKYRGEFEERLKSVLNELAREEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LVE+
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEQ 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHAVDITDPAIVAAASLSNRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE MDKLERR+IQLK+E +A+ +E D +S KRL +I+ E + EIKYA LEK
Sbjct: 401 IRMQIDSKPEEMDKLERRIIQLKLEEQALAKETDTASLKRLEIIELEREQAEIKYAELEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK ++E+ +L + A R SD +S+L+YG++ LE+ L++ +Q +
Sbjct: 461 VWNKEKEAMQGTQGIKTDLEQAKLDLEIARRASDLSRMSELQYGKIPALEQKLEKAAQNE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
I + TLLK KV EIA+++SR TGIPV K++ E++KL+N+E + ++V+GQ
Sbjct: 521 I------TENTLLKNKVTEVEIADVLSRWTGIPVRKMLGGEKDKLINMEAAIARQVIGQT 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D +P GS +FLGPTGVGKTELCK L+ +F+ +E++IRIDM
Sbjct: 575 EAVKAVSNAIRRSRAGLADPDKPVGSLLFLGPTGVGKTELCKALATFMFDTQEAMIRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKIYFRPEF 611
DDGRLTD GRT+NF+NTII+MTSNLGSD I + + G++ +++ +VM V +FRPEF
Sbjct: 695 DDGRLTDGHGRTVNFKNTIIIMTSNLGSD-IIQAQSGEENYVQMKASVMQVVGTHFRPEF 753
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INR+DDI+VF L + I +IA IQLN L+ +L +M L+IS AL K++ GFD YG
Sbjct: 754 INRVDDIVVFHLLGMQEIKAIAKIQLNGLRQRLSEMGYQLEISARALDKLAESGFDPTYG 813
Query: 672 AR 673
AR
Sbjct: 814 AR 815
>gi|167856244|ref|ZP_02478978.1| chaperone ClpB [Haemophilus parasuis 29755]
gi|167852631|gb|EDS23911.1| chaperone ClpB [Haemophilus parasuis 29755]
Length = 857
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 552/667 (82%), Gaps = 5/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +++ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEDLTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L+
Sbjct: 453 YAELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLQ 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ +GIPVSK+++ E+EKLL +E +L K
Sbjct: 513 EAVKREEEGGEN----HLLRTKVTDEEIAEVLSKASGIPVSKMMEGEKEKLLRMEEVLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQSEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E E + +K VMN V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENAENMSYDEMKTIVMNVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L+++NI +IA IQL L ++ + ++ ++ AA+ I GF
Sbjct: 749 FRPEFINRIDETVVFHPLDKENIRAIARIQLERLIKRMAERGYEVTVTDAAVDHIGEAGF 808
Query: 667 DLIYGAR 673
D ++GAR
Sbjct: 809 DPLFGAR 815
>gi|386389403|ref|ZP_10074219.1| ATP-dependent chaperone protein ClpB [Haemophilus
paraphrohaemolyticus HK411]
gi|385695782|gb|EIG26333.1| ATP-dependent chaperone protein ClpB [Haemophilus
paraphrohaemolyticus HK411]
Length = 857
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/666 (60%), Positives = 550/666 (82%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAAVLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELAAKERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+IWK EK+ + +Q IK E+E R+ +++A R+++++ +S+L+YG++ LE+ L+
Sbjct: 453 YSELEEIWKAEKSALLGTQHIKTELENARIAMDQARRENNFEKMSELQYGKIPALEKQLQ 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGGEN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ +VFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPEVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+EM + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPEATYGELKEVVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L +++I SIA IQL L ++ + ++ I+ AA+ I GFD
Sbjct: 749 RPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRMAERGYEVTITDAAINHIGKAGFD 808
Query: 668 LIYGAR 673
++GAR
Sbjct: 809 PLFGAR 814
>gi|262273641|ref|ZP_06051454.1| ClpB protein [Grimontia hollisae CIP 101886]
gi|262222056|gb|EEY73368.1| ClpB protein [Grimontia hollisae CIP 101886]
Length = 857
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 546/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+TIDLTEKA GKLDPVIGRD+EIRR +QVLQRR+KNNPV+IGEPGVGKTA
Sbjct: 155 EEARQALEKFTIDLTEKAEQGKLDPVIGRDEEIRRTVQVLQRRTKNNPVIIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRNKRVLSLDMGSLVAGAKYRGEFEERLKSVLNELAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPTVEDTVAILRGLKERYELHHAVEITDPAIVAAASLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERRLIQLKIE +A+ +E DE+SKKRL ++ EI++ E +
Sbjct: 395 DEAASSIRMQIDSKPEQLDRLERRLIQLKIEQQALAKENDEASKKRLETLQSEIDEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK +E+ R + A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWNAEKAALSGTQHIKSALEQARTDLEIARRAGDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLLK +V EIAE++SR TGIPV+K+++ E+EKLL++E+ L
Sbjct: 515 LASQAEMQ------EMTLLKNRVTDAEIAEVLSRQTGIPVAKMLEGEKEKLLHMEDELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+++V+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F++ ++
Sbjct: 569 RVIGQEEAVTSVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLAEFLFDSSDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRN +++MTSNLGSD+I+E + D IK VM+ V +
Sbjct: 689 LLLQVLDDGRLTDGQGRTVDFRNAVVIMTSNLGSDRIQEHFGELDYSGIKAMVMDVVSKH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L +++I SIA+IQL L ++ + ++ L+++ AL I++ GF
Sbjct: 749 FRPEFINRVDESVVFHPLGQEHIKSIASIQLAHLAKRMAERDLILEVTDEALTLIADAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|389781121|ref|ZP_10194528.1| ATP-dependent chaperone ClpB [Rhodanobacter spathiphylli B39]
gi|388435401|gb|EIL92308.1| ATP-dependent chaperone ClpB [Rhodanobacter spathiphylli B39]
Length = 863
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/672 (61%), Positives = 542/672 (80%), Gaps = 12/672 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KY IDLTE+A KLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYCIDLTERAERNKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRII GEVP L +++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLSDLSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIADRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D SK+RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQRLADLETDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L +IWK EK ++ + ++KE+IE+ ++ A R+ D+ +S+++YG+L +LE+ L
Sbjct: 455 FSDLNEIWKSEKASLQGTTRVKEQIEQAHQELESAQRRQDYAKMSEIQYGKLPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ Q F L++TKV +EEIAE+V+R TGIPVSK+++ ER+KLL +E+ L K
Sbjct: 515 AAQAAETQ------DFKLVQTKVTAEEIAEVVARWTGIPVSKMLEGERDKLLKMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AV++AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ ++
Sbjct: 569 RVVGQDEAVHAVADAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFMFDTTDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKE----IIKLAVMN 601
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++ + GD E +K +VM
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDASENGGDAEEQYTQMKASVMG 748
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+D+I+VFR L++ I +IA IQL L+ +L + + L ++ AL +
Sbjct: 749 VVQAHFRPEFINRLDEIVVFRPLDKAQIRAIAKIQLQYLERRLAERQLKLDVADDALALL 808
Query: 662 SNIGFDLIYGAR 673
N+GFD +YGAR
Sbjct: 809 GNVGFDPVYGAR 820
>gi|120599936|ref|YP_964510.1| ATPase [Shewanella sp. W3-18-1]
gi|146292128|ref|YP_001182552.1| ATPase [Shewanella putrefaciens CN-32]
gi|120560029|gb|ABM25956.1| ATPase AAA-2 domain protein [Shewanella sp. W3-18-1]
gi|145563818|gb|ABP74753.1| ATPase AAA-2 domain protein [Shewanella putrefaciens CN-32]
Length = 857
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/706 (59%), Positives = 556/706 (78%), Gaps = 21/706 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLNELSQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL +++E+ +E K
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLDHLQEELRDVEAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG + +LE+ L
Sbjct: 455 ASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 LASQAEMQ------DMTLLRNKVTEFEIAEVLSKATGIPVSKMLEGEREKLLQMEVALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLARFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI----IKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G ++ +K AVMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFGQVTYAEMKAAVMNVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEF+NRID+ +VF L+ NI IA+IQ+ L+ +L + + L+I+ AL I+
Sbjct: 746 THSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKDYTLEITDEALSLIAE 805
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 709
IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 806 IGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGKP 843
>gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208559|ref|YP_001053784.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|126097351|gb|ABN74179.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
Length = 857
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/706 (58%), Positives = 565/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLH 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE RR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAARRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AAL I GFD
Sbjct: 749 RPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAALDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P + I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVVD 846
>gi|297171552|gb|ADI22550.1| hypothetical protein [uncultured Oceanospirillales bacterium
HF0500_09M11]
Length = 861
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/668 (63%), Positives = 543/668 (81%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ + LKKYT DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDKMEALKKYTQDLTARAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKDKRVLALDMAALIAGAKYRGEFEERLKAVLNELSKQEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFVDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQHIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V++P +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVQVDQPSVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDS PE MD+L+RRLIQLK+E EA+++E DE+SKKRL ++ EI LE +
Sbjct: 395 DEAASRIRMEIDSMPEEMDRLDRRLIQLKMEREALRKEDDEASKKRLDKLQDEIAALEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK ++ +QQ K E+E+ R+ + +A R D +S+L+YG + LE+
Sbjct: 455 YADLEEIWNAEKAALQGAQQYKAELEQARVDMEQARRAGDLSRMSELQYGVIPDLEK--- 511
Query: 368 EKSQKDIQLPNNANKFT-LLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
K Q + +A T LL+ KV EE+AE+VS+ TGIPVSK+++ ER+KLL +E L
Sbjct: 512 -KVQTAQEAEESAQVETKLLRNKVTEEEVAEVVSKWTGIPVSKMLEGERDKLLRMEEALH 570
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
RVVGQDEA++AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE
Sbjct: 571 ARVVGQDEAVTAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAGFLFDTEE 630
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVF
Sbjct: 631 AMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVF 690
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKI 605
NILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I+ M GD + +K AVM V
Sbjct: 691 NILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRMAGDGDYDAMKGAVMEVVGQ 750
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINR+D+ +VF L R + IA IQL+ L+ +L++ +M L++S AL+K+ G
Sbjct: 751 HFRPEFINRVDETVVFHPLARGQLKGIAAIQLDYLRQRLVERDMGLRLSDKALEKLVEAG 810
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 811 FDPVYGAR 818
>gi|260581686|ref|ZP_05849483.1| ATP-dependent chaperone ClpB [Haemophilus influenzae NT127]
gi|260095279|gb|EEW79170.1| ATP-dependent chaperone ClpB [Haemophilus influenzae NT127]
Length = 856
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 540/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPDLEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|167625158|ref|YP_001675452.1| ATPase [Shewanella halifaxensis HAW-EB4]
gi|167355180|gb|ABZ77793.1| ATPase AAA-2 domain protein [Shewanella halifaxensis HAW-EB4]
Length = 857
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/668 (62%), Positives = 538/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINNEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELSQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+LERR IQLK+E +A+ +E DE+S +RL +++ E+ +E K
Sbjct: 395 DEAASSIRIQIDSKPESLDRLERRAIQLKLEEQALSKEADEASLRRLDVLRAELKDVEAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG + +LE+ L
Sbjct: 455 AAELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ ER+KLL +E+ L +
Sbjct: 515 LASQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLEGERDKLLKMEDALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+++VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ E +
Sbjct: 569 RVIGQNEAVNSVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELCKALAKFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I +M G + + +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-QMGFGKQTYDEMKFDVMQVVTQ 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEF+NRID+ +VF L+ KNI IA IQ+ LK +L + + L+ISK AL I+ +G
Sbjct: 748 NFRPEFLNRIDEAVVFHPLHEKNIAHIAAIQIEGLKQRLAEKDYGLEISKDALSFIARVG 807
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 808 FDPIYGAR 815
>gi|77359882|ref|YP_339457.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas
haloplanktis TAC125]
gi|76874793|emb|CAI86014.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas
haloplanktis TAC125]
Length = 858
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/668 (63%), Positives = 545/668 (81%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S KR +++ I +LE +
Sbjct: 395 DEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASLKRRTEMQELITELEGE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG + +LER L
Sbjct: 455 YNELDEIWTAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLLK +VG +EIAEI+SR TGIPVS+++Q EREKLL +E L +
Sbjct: 515 LASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREKLLQMEEKLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E +
Sbjct: 569 KVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGYMFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + G+ + + L VMN +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQE-QAGNNDYVTLKEKVMNVLIN 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+ +VF L ++I IA+IQL+ L+ +L +M L+IS AAL++I+ G
Sbjct: 748 EFRPEFINRIDETVVFHPLANEHIKEIADIQLSKLRERLTQMGYLLEISDAALERIAASG 807
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 808 FDPVYGAR 815
>gi|70732609|ref|YP_262372.1| ATP-dependent chaperone protein ClpB [Pseudomonas protegens Pf-5]
gi|68346908|gb|AAY94514.1| ATP-dependent chaperone protein ClpB [Pseudomonas protegens Pf-5]
Length = 854
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/666 (63%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGHSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQNEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVSTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITQIQLGRLRSRLAERELSLELSDEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|345428733|ref|YP_004821849.1| protein disaggregation chaperone [Haemophilus parainfluenzae T3T1]
gi|301154792|emb|CBW14255.1| protein disaggregation chaperone [Haemophilus parainfluenzae T3T1]
Length = 856
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 540/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELADKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDAAKTEMEQARRAGDLSKMSELQYGRIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ +LL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 AAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKNESYGEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L+++NI +IA+IQL L ++ +L ++A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLDKENIRAIASIQLERLAKRMETRGYELVFTEALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|307263757|ref|ZP_07545363.1| hypothetical protein appser13_11680 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|306870878|gb|EFN02616.1| hypothetical protein appser13_11680 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 857
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/706 (58%), Positives = 567/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLA 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L +++I +IA IQL L +L + ++ ++ +AL I GFD
Sbjct: 749 RPEFINRIDETVVFHPLGQEHIRAIARIQLQRLIARLAERGYEVTVTDSALDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P + I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVVD 846
>gi|307257140|ref|ZP_07538912.1| hypothetical protein appser10_11400 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306864302|gb|EFM96213.1| hypothetical protein appser10_11400 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 857
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/706 (58%), Positives = 567/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLA 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L +++I +IA IQL L +L + ++ ++ +AL I GFD
Sbjct: 749 RPEFINRIDETVVFHPLGQEHIRAIARIQLQRLIARLAERGYEVTVTDSALDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P + I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVVD 846
>gi|410622643|ref|ZP_11333474.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
pallidula DSM 14239 = ACAM 615]
gi|410157836|dbj|GAC28848.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
pallidula DSM 14239 = ACAM 615]
Length = 858
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/661 (63%), Positives = 541/661 (81%), Gaps = 5/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTMDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L E+S + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGSLLAGAKFRGEFEERLKAVLNELSKEEGKVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G G EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+ V++
Sbjct: 281 HTMVGAGAGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVQVDQ 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSNRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE MDKLERR+IQLK+E +A+ +E D SS KRL +I+ E +LE K+A L+K
Sbjct: 401 IRMQIDSKPEEMDKLERRIIQLKLEEQALSKETDTSSLKRLEVIEIEREQLEQKFAELDK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK+ ++ +Q IK E+E+ +L + A R SD +S+L+YG + +LE LK + +
Sbjct: 461 IWRAEKSAMQGTQFIKAELEQAKLDLEIARRASDLSRMSELQYGRIPELE--LKLEQANE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ NA + LLK KV +EIA+++SR TGIPVSK+++ E++KL+++E+++ KRVVGQ
Sbjct: 519 TETETNATR--LLKNKVTEKEIADVLSRWTGIPVSKMLEGEKDKLIHMEDIIGKRVVGQK 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAI+RSR+GLSD +P GSF+FLGPTGVGKTELCK+L+ +F+ E+++IRIDM
Sbjct: 577 EAVVAVSNAIKRSRAGLSDPDKPTGSFLFLGPTGVGKTELCKSLANFLFDTEDAMIRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-IKLAVMNEVKIYFRPEFI 612
DDGRLTD GRT+NF+NT+I+MTSNLGS+ I+ I +K VM EV +FRPEFI
Sbjct: 697 DDGRLTDGHGRTVNFKNTLIIMTSNLGSEIIQNHTDDSTYIEMKQQVMAEVSTHFRPEFI 756
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DDI+VF L R+ I SIA IQL L+ +L +M + L+IS AAL I+ GFD +YGA
Sbjct: 757 NRVDDIVVFHSLGREEIKSIAKIQLVGLRQRLQEMGLKLEISAAALDIIAEAGFDPVYGA 816
Query: 673 R 673
R
Sbjct: 817 R 817
>gi|375264537|ref|YP_005021980.1| ClpB protein [Vibrio sp. EJY3]
gi|369839861|gb|AEX21005.1| ClpB protein [Vibrio sp. EJY3]
Length = 857
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/661 (61%), Positives = 541/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLALDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + +E+ + E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLTTLNEELTEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L +RV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHQRVIGQV 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAILDYQGIKNEVMEVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L +L + + DL++ AL+ I+ +GFD +YGA
Sbjct: 755 NRVDETVVFHPLGKEHIKSIASIQLERLHKRLAEKDYDLEVGDEALELIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|54035760|sp|Q6LMY0.2|CLPB_PHOPR RecName: Full=Chaperone protein ClpB
Length = 857
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/667 (61%), Positives = 545/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IG+PGVGKTA
Sbjct: 155 EENRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRHKRVLSLDMGSLIAGAKYRGEFEERLKSVLNELSQEEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAARLSHRYVSDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+ +E D +S+KRL I +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALSKESDAASQKRLNDICEELDVKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG++ +LE+ L
Sbjct: 455 YAELEEVWNAEKAALSGTQHIKSELEQARMNMEVARRAGDLNRMSELQYGKIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LLK KV EIAE++S+ TGIPV+K+++ ER+KLL +E+ L +
Sbjct: 515 LAAQAEMQ------EMSLLKNKVTDAEIAEVLSKQTGIPVAKMLEGERDKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDN 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E + E IK V+ V Y
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQENFGNLNYEGIKNMVLEVVSQY 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L ++NI IA+IQ+ L N+L + + +L + ++AL ++ GF
Sbjct: 749 FRPEFINRVDETVVFHPLGQENIKHIASIQIERLVNRLKEKDYELTVQESALDFVAKAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|386288476|ref|ZP_10065617.1| ATPase [gamma proteobacterium BDW918]
gi|385278492|gb|EIF42463.1| ATPase [gamma proteobacterium BDW918]
Length = 862
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/668 (63%), Positives = 548/668 (82%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTIDLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ LLAG K+RG+FE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDLGALLAGAKFRGDFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLNEYRQSIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAATKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE+MDKLERRLIQLKI+ EA+K++ D ++KK+L ++ +I+K+E +
Sbjct: 395 DEAASRIRMEIDSKPEVMDKLERRLIQLKIQREAVKKDDDLAAKKQLEILNADISKVEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L +IWK EK ++ S QIK ++E+ +L++ A R D +S+L+YG++ +LE+ L
Sbjct: 455 FSDLNEIWKGEKAALQGSAQIKVDLEQAKLELETARRAGDLTRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
D LL+ KV EE+AE+VSR TGIP+SK+++ ER+KLL +E+ L +
Sbjct: 515 TADAVD------HGAMQLLRNKVSEEEVAEVVSRWTGIPISKMLEGERDKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK LS ++++E++
Sbjct: 569 RVIGQSEAVDAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALSMFLYDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+EM E K+ AV+N V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDVIQEMTVAGSEYPKIRDAVLNVVSG 748
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L+R + +IA IQL IL ++L + + L++S+ AL ++++IG
Sbjct: 749 HFRPEFINRIDELVVFEPLDRTQVQAIAGIQLGILNSRLAERELRLEVSEEALDRLADIG 808
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 809 FDPVYGAR 816
>gi|330504856|ref|YP_004381725.1| ATPase [Pseudomonas mendocina NK-01]
gi|328919142|gb|AEB59973.1| ATPase [Pseudomonas mendocina NK-01]
Length = 854
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 550/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+ + II
Sbjct: 215 IAEGLAQRIVNGEVPDGLKDKRLLSLDMGSLIAGAKFRGEFEERLKSVLNELGKQEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL+ ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLVKLEEDIAKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKTELESARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLKMEGLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GDKE + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDKEAQRAAVMDAVGSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + ++ L+++ AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRGRLAERDLTLELTPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|319897647|ref|YP_004135844.1| protein disaggregation chaperone [Haemophilus influenzae F3031]
gi|317433153|emb|CBY81527.1| protein disaggregation chaperone [Haemophilus influenzae F3031]
Length = 856
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 541/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSK E +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKSEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKEESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|29653454|ref|NP_819146.1| ATP-dependent chaperone ClpB [Coxiella burnetii RSA 493]
gi|161830087|ref|YP_001596062.1| ATP-dependent chaperone ClpB [Coxiella burnetii RSA 331]
gi|212213377|ref|YP_002304313.1| ClpB [Coxiella burnetii CbuG_Q212]
gi|54035826|sp|Q83F55.1|CLPB_COXBU RecName: Full=Chaperone protein ClpB
gi|29540716|gb|AAO89660.1| ClpB [Coxiella burnetii RSA 493]
gi|161761954|gb|ABX77596.1| ATP-dependent chaperone ClpB [Coxiella burnetii RSA 331]
gi|212011787|gb|ACJ19168.1| ClpB [Coxiella burnetii CbuG_Q212]
Length = 859
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/701 (61%), Positives = 566/701 (80%), Gaps = 12/701 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLTEKA GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LAKYTIDLTEKAETGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +LK+I+ + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERLKAVLKDIAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+ I+ILRGL+++YEVHHGVEITDPAI+AA+ LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQRYITDRNLPDKAIDLIDEAASQ 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKP +D+LERRLIQLKIE EA+K+E DE+SKKRL ++ EI +E +Y++LE+
Sbjct: 401 IRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASKKRLSDLETEIKNVEKEYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +QQIKEE+E+ R+++ A R D +S+L+YG + +L++ LK SQK+
Sbjct: 461 VWKSEKASLHGTQQIKEELEQARIELEAAGRAGDLARMSELQYGIIPELDKKLKAASQKE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q ++ LL+++V EE+AE+VS+ T IPVSK+++ EREKLL++E L KRV+GQD
Sbjct: 521 EQFHDH----KLLRSRVTEEEVAEVVSKWTHIPVSKMLEGEREKLLHMETELHKRVIGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ E++++RIDM
Sbjct: 577 EAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTELCKALAVFLFDTEDAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYS+ILLDEIEKA++DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHNDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+IVMTSNLGSD I+E + + +K AVM V +FRPEFIN
Sbjct: 697 DDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGENYDKMKDAVMEVVAQHFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L ++ I +IA IQ++ +K +L + + L IS AL +S +G+D +YGAR
Sbjct: 757 RIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLTISDDALDYLSELGYDPVYGAR 816
Query: 674 DVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN---KGPQ 710
+ K+ L L+ + +K E F+ G LIN KG Q
Sbjct: 817 PL---KRVLQQQLENPLSQKILEGKFV-PGSLINIEKKGEQ 853
>gi|148828042|ref|YP_001292795.1| DNA polymerase I [Haemophilus influenzae PittGG]
gi|148719284|gb|ABR00412.1| DNA polymerase I [Haemophilus influenzae PittGG]
Length = 856
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 541/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRR R+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRRRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|388600531|ref|ZP_10158927.1| hypothetical protein VcamD_11584 [Vibrio campbellii DS40M4]
Length = 857
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 543/661 (82%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL ++ +E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNENDEASEKRLDVLNEELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQA 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVLIMTSNLGSARIQENFATLDYQGIKNEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L ++ + L++S+ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLERLAKRIEEKGYQLEVSEKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|383318057|ref|YP_005378899.1| ATP-dependent chaperone ClpB [Frateuria aurantia DSM 6220]
gi|379045161|gb|AFC87217.1| ATP-dependent chaperone ClpB [Frateuria aurantia DSM 6220]
Length = 860
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/670 (60%), Positives = 538/670 (80%), Gaps = 11/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KY +DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYCVDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+ GEVP L +++L LD+ L+AG K+RGEFE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIVKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLNDLAKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIPDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +++E DE S++RL ++ +I+ E
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLRKEKDEESRRRLADLESDIDTEERV 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + ++KE+IE RL + A R+ D+ +S+++YG L +LE+ L
Sbjct: 455 FSDLNEVWKSEKAALQGTTKVKEQIEAARLALETAQRQQDYARMSEIQYGTLPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ Q F L++ +V +EEIAE+V+R TGIPV+K+++ EREKLL++E +L +
Sbjct: 515 AAQAAETQ------DFKLVQDRVTAEEIAEVVARWTGIPVAKMLEGEREKLLHMEQVLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRR+R+GLSD RPYGSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVVGQDEAVRAVSDAIRRARAGLSDPNRPYGSFLFLGPTGVGKTELCKALADFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI----IKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+E + GD E +K +V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSSLIQE-QAGDSEADYVQMKASVLGVV 747
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+D+++VFR L I +IA IQL L+ +L + + L+++ AL+ +
Sbjct: 748 QAHFRPEFINRLDELVVFRPLQSAQIRAIARIQLAGLEQRLAERQLKLEVNDEALQLLGQ 807
Query: 664 IGFDLIYGAR 673
GFD +YGAR
Sbjct: 808 AGFDPVYGAR 817
>gi|256822309|ref|YP_003146272.1| ATP-dependent chaperone ClpB [Kangiella koreensis DSM 16069]
gi|256795848|gb|ACV26504.1| ATP-dependent chaperone ClpB [Kangiella koreensis DSM 16069]
Length = 862
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/672 (61%), Positives = 547/672 (81%), Gaps = 12/672 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E++ L+KYTIDL +A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIG PGVGKTA
Sbjct: 155 EDNRQALEKYTIDLNARAESGKLDPVIGRDDEIRRCIQVLQRRSKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLNDLAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPSTEDTIAILRGLKERYEVHHGVEITDPAIVAATTLSQRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE+MDKLERRLIQLKI+ EA+K+E DESSKKRLL ++++I +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVMDKLERRLIQLKIQREALKKEEDESSKKRLLDLEQQIAELEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+A L++IW EK + +Q IK +++K R+++ A R D +S+L+YG + +LE L
Sbjct: 455 FAELDEIWSSEKASVHGAQNIKADLDKARVELEAAQRAGDLTRMSELQYGTIPELEAKLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ S++D + LL+ KV EIAE+VS+ TGIPVSK+++ EREKLL +E++L
Sbjct: 515 KVSEQD------TVEMQLLRNKVTDVEIAEVVSKWTGIPVSKMLEGEREKLLRMEDVLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
V+GQDEA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 NVIGQDEAVTAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKTLAKFLFDSEDN 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH+++RLIGAPPGY+GYE+GGYLTE VRRKPYS+IL DE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHAVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILFDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDK--EIIKLAVMN 601
+LLQ+L+DGRLTD++GRT++F+NT+IVMTSN+GSD I+ E GDK E +K +M+
Sbjct: 689 VLLQVLEDGRLTDSQGRTVDFKNTVIVMTSNMGSDLIQAHSANTEGGDKDYEDMKSMLMD 748
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
+ +FRPEFINRID+I+VF L ++ I SIA IQ+ L +L + ++K++ L+ +
Sbjct: 749 VIGKHFRPEFINRIDEIVVFHPLAKEQIKSIAAIQMERLLQRLREQGFEVKVTDGLLELL 808
Query: 662 SNIGFDLIYGAR 673
S GFD ++GAR
Sbjct: 809 SESGFDPVFGAR 820
>gi|397685796|ref|YP_006523115.1| ClpB protein [Pseudomonas stutzeri DSM 10701]
gi|395807352|gb|AFN76757.1| ClpB protein [Pseudomonas stutzeri DSM 10701]
Length = 854
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T +A G+LDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTRRAEEGRLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLSLDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++ KRL +++E+ KLE +
Sbjct: 395 DEAASRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEDDEATMKRLAKLEEEVVKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG + ER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMAELQYGIIPDFERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLKMEDLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ +V+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVSVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSTQIQEL-VGDPDAQRAAVMDAVSSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L ++ I IA IQL L+ +L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLAKEQIAGIAQIQLERLRQRLAERELSLQLSDEAMDKLVAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|54310128|ref|YP_131148.1| clpB, ATPase with chaperone activity [Photobacterium profundum SS9]
gi|46914567|emb|CAG21346.1| putative clpB, ATPases with chaperone activity [Photobacterium
profundum SS9]
Length = 861
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/667 (61%), Positives = 545/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IG+PGVGKTA
Sbjct: 159 EENRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 219 IVEGLAQRIVNGEVPEGLRHKRVLSLDMGSLIAGAKYRGEFEERLKSVLNELSQEEGSVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 339 KVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAARLSHRYVSDRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+ +E D +S+KRL I +E++ E +
Sbjct: 399 DEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALSKESDAASQKRLNDICEELDVKERE 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG++ +LE+ L
Sbjct: 459 YAELEEVWNAEKAALSGTQHIKSELEQARMNMEVARRAGDLNRMSELQYGKIPELEKQLD 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LLK KV EIAE++S+ TGIPV+K+++ ER+KLL +E+ L +
Sbjct: 519 LAAQAEMQ------EMSLLKNKVTDAEIAEVLSKQTGIPVAKMLEGERDKLLRMEDELHQ 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 573 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDN 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E + E IK V+ V Y
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQENFGNLNYEGIKNMVLEVVSQY 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L ++NI IA+IQ+ L N+L + + +L + ++AL ++ GF
Sbjct: 753 FRPEFINRVDETVVFHPLGQENIKHIASIQIERLVNRLKEKDYELTVQESALDFVAKAGF 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|251793445|ref|YP_003008174.1| ATP-dependent chaperone ClpB [Aggregatibacter aphrophilus NJ8700]
gi|422337408|ref|ZP_16418379.1| chaperone ClpB [Aggregatibacter aphrophilus F0387]
gi|247534841|gb|ACS98087.1| ATP-dependent chaperone ClpB [Aggregatibacter aphrophilus NJ8700]
gi|353345435|gb|EHB89730.1| chaperone ClpB [Aggregatibacter aphrophilus F0387]
Length = 856
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/706 (58%), Positives = 558/706 (79%), Gaps = 14/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +LKE++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLKELAQEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + +LL+ +V EEIAE++SR TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 AAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNQEESYDEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF LN+ NI +IA IQL L N++ L + L IS IG+D
Sbjct: 749 RPEFINRIDETVVFHPLNKDNIRAIAEIQLKRLINRMESRGYVLHFTDDTLNFISEIGYD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
IYGAR + K+++ + ++P A I G L+ + P ++D
Sbjct: 809 PIYGARPL---KRAIQQEI-----ENPLAQQILSGSLLPEKPITVD 846
>gi|194366917|ref|YP_002029527.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia R551-3]
gi|194349721|gb|ACF52844.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia R551-3]
Length = 861
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/706 (59%), Positives = 558/706 (79%), Gaps = 24/706 (3%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ ++ II
Sbjct: 215 IVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKSEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL ++ +I+ LE +
Sbjct: 395 DEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADLENDIDGLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL- 366
+++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG L +LE+ L
Sbjct: 455 FSDLNEIWKSEKAALQGTTKIKEQVEQAKLELESAQRRQDFAKMSEIQYGLLPQLEKQLA 514
Query: 367 --KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
+E KD F L++ +V EEIAE+VSR TGIPV+K+++ ER+KLL +E +
Sbjct: 515 AAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEV 565
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++
Sbjct: 566 LHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDS 625
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ D
Sbjct: 626 ADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPD 685
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D +K AVM
Sbjct: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSSDDSPEAYTQMKAAVM 745
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + + L +S AA
Sbjct: 746 GVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLKLVVSDAAFDL 805
Query: 661 ISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
+ N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 806 LGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFVN 843
>gi|424924967|ref|ZP_18348328.1| ClpB [Pseudomonas fluorescens R124]
gi|404306127|gb|EJZ60089.1| ClpB [Pseudomonas fluorescens R124]
Length = 854
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAMKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GL+D RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSSQIQEL-VGDREAQRAAVMDALTAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|387813183|ref|YP_005428664.1| ATP-dependent protease [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338194|emb|CCG94241.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 859
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/668 (61%), Positives = 536/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALSKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L KK+L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYR+ IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRENIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL + I +E +
Sbjct: 395 DEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKKRLEELSAVIGNVERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK + SQ+IK ++E+ R+ + A R D +S+L+YG++ +LER L
Sbjct: 455 YADLEEVWNTEKAALHGSQKIKSQLEQARIDLENARRAGDLGKMSELQYGKIPELERQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++ + LL+ +V EEIAEIVS+ TGIPVSK+++ ER+KL+ +E L
Sbjct: 515 MASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLEGERDKLMRMEEALHD 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALANFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS I+E + G++ E +K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSHIIQE-KAGEENYEDMKSAVMEVVGT 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINR+D+++VF L I IA IQ+ L +L +M L++ ++ ++ +G
Sbjct: 748 HFRPEFINRVDEVVVFHPLAESQIQGIARIQIENLARRLKDQDMKLELGDDVMQLLAEVG 807
Query: 666 FDLIYGAR 673
+D +YGAR
Sbjct: 808 YDPVYGAR 815
>gi|188578062|ref|YP_001914991.1| ATP-dependent chaperone ClpB [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188522514|gb|ACD60459.1| ATP-dependent chaperone ClpB [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 898
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/673 (61%), Positives = 544/673 (80%), Gaps = 16/673 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 192 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 251
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S + II
Sbjct: 252 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKTEGQII 311
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 312 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 371
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 372 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 431
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL ++ +I+KLE +
Sbjct: 432 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLESDIDKLERE 491
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLER--- 364
+ +L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE+
Sbjct: 492 FYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQML 551
Query: 365 ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
I E D F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+
Sbjct: 552 IANEVEHHD---------FKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDE 602
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 603 LHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDS 662
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
E++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRR+PY+LILLDE+EKA++D
Sbjct: 663 TEAMIRIDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEAVRRRPYALILLDEVEKAHAD 722
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI---IKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E +K AVM
Sbjct: 723 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVM 782
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+
Sbjct: 783 GVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLRLDLDDAALEL 842
Query: 661 ISNIGFDLIYGAR 673
+ N+GFD +YGAR
Sbjct: 843 LGNVGFDPVYGAR 855
>gi|58580960|ref|YP_199976.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|58425554|gb|AAW74591.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
KACC 10331]
Length = 898
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/673 (61%), Positives = 544/673 (80%), Gaps = 16/673 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 192 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 251
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S + II
Sbjct: 252 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKTEGQII 311
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 312 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 371
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 372 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 431
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL ++ +I+KLE +
Sbjct: 432 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLESDIDKLERE 491
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLER--- 364
+ +L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE+
Sbjct: 492 FYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQML 551
Query: 365 ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
I E D F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+
Sbjct: 552 IANEVEHHD---------FKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDE 602
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 603 LHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDS 662
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
E++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRR+PY+LILLDE+EKA++D
Sbjct: 663 TEAMIRIDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEAVRRRPYALILLDEVEKAHAD 722
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI---IKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E +K AVM
Sbjct: 723 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVM 782
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+
Sbjct: 783 GVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLRLDLDDAALEL 842
Query: 661 ISNIGFDLIYGAR 673
+ N+GFD +YGAR
Sbjct: 843 LGNVGFDPVYGAR 855
>gi|389681723|ref|ZP_10173067.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis O6]
gi|388554258|gb|EIM17507.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis O6]
Length = 854
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/666 (63%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEKLQEEITRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGQSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQNEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDAVSSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID++++F L R I I IQL L+ +L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELKLELSGEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|392556409|ref|ZP_10303546.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas undina
NCIMB 2128]
Length = 858
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/667 (62%), Positives = 540/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLKIE A+ +E DE+S+KR + + I +LE++
Sbjct: 395 DEAGSSIRLQIDSKPEALDKLERRIIQLKIEDNALAKEKDEASQKRRAEMVELITELEVQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + +LLK +VG +EIAEI+SR TGIPV++++Q EREKLL +E L
Sbjct: 515 LASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVARMLQGEREKLLQMEEQLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E +
Sbjct: 569 KVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGYMFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D + +K VM +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQSGSNDYDELKAKVMGVLHNE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L +I IA+IQL+ L+ +L +M L+++ AAL++I+ GF
Sbjct: 749 FRPEFINRIDETVVFHSLAHSHIKEIADIQLSKLRERLTEMGYLLELTDAALERIAASGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|254524598|ref|ZP_05136653.1| ATP-dependent chaperone ClpB [Stenotrophomonas sp. SKA14]
gi|219722189|gb|EED40714.1| ATP-dependent chaperone ClpB [Stenotrophomonas sp. SKA14]
Length = 859
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/706 (59%), Positives = 557/706 (78%), Gaps = 24/706 (3%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ ++ II
Sbjct: 213 IVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKSEGQII 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 273 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 333 KVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL ++ +I+ LE +
Sbjct: 393 DEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADLENDIDALERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL- 366
+++L +IWK EK ++ + +IKE++E+ +L + A R+ D+ +S+++YG L +LE+ L
Sbjct: 453 FSDLNEIWKSEKAALQGATKIKEQVEQAKLDLESAQRRQDFARMSEIQYGLLPQLEKQLA 512
Query: 367 --KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
+E KD F L++ +V EEIAE+VSR TGIPV+K+++ ER+KLL +E +
Sbjct: 513 AAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEV 563
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++
Sbjct: 564 LHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDS 623
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ D
Sbjct: 624 ADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPD 683
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D +K AVM
Sbjct: 684 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVM 743
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + + L +S AA
Sbjct: 744 GVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLKLVVSDAAFDL 803
Query: 661 ISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
+ N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 804 LGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFVN 841
>gi|319775209|ref|YP_004137697.1| protein disaggregation chaperone [Haemophilus influenzae F3047]
gi|317449800|emb|CBY86008.1| protein disaggregation chaperone [Haemophilus influenzae F3047]
Length = 856
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 540/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDDLLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|148826496|ref|YP_001291249.1| ATP-dependent chaperone ClpB [Haemophilus influenzae PittEE]
gi|229845911|ref|ZP_04466023.1| ClpB [Haemophilus influenzae 7P49H1]
gi|148716656|gb|ABQ98866.1| ClpB [Haemophilus influenzae PittEE]
gi|229810915|gb|EEP46632.1| ClpB [Haemophilus influenzae 7P49H1]
Length = 856
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 541/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELVEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP SF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPISSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|325577681|ref|ZP_08147956.1| chaperone protein ClpB [Haemophilus parainfluenzae ATCC 33392]
gi|325160426|gb|EGC72552.1| chaperone protein ClpB [Haemophilus parainfluenzae ATCC 33392]
Length = 856
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/666 (60%), Positives = 540/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE++ E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELSDKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGSQHIKQELDAAKTEMEQARRAGDLSKMSELQYGRIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ +LL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 AAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKNESYGEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L ++A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTEALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|357416692|ref|YP_004929712.1| ATP-dependent Clp protease subunit [Pseudoxanthomonas spadix
BD-a59]
gi|355334270|gb|AER55671.1| ATP-dependent Clp protease subunit [Pseudoxanthomonas spadix
BD-a59]
Length = 861
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/670 (61%), Positives = 541/670 (80%), Gaps = 10/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP +L +K++L LD+ L+AG K+RGEFE+RLK +L +++ ++ II
Sbjct: 215 IVEGLAQRIVNGEVPENLKNKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKSEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYIADRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D++ERRLIQLK + E +K+E D S KRL ++ +I+ LE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRMERRLIQLKTQREMLKKEKDAESAKRLADLEADIDTLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE R+++ A R+ D+ +S+++YG L +LE+ L
Sbjct: 455 FSDLNEVWKSEKAALQGATRIKEQIEAARVELEGAQRRQDYARMSEIQYGVLPQLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +F L++ +V +EEIAE+VSR TGIPVSK+++ EREKLL +E+ L +
Sbjct: 515 EAQAA------EQQEFKLVQDRVTAEEIAEVVSRWTGIPVSKMLEGEREKLLKMEDQLRE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EAI VS+++RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++ E+
Sbjct: 569 RVVGQEEAIKVVSDSVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHGDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+EM + IK AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSHDESAESYTKIKAAVMGVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + L++S AAL + +
Sbjct: 749 QAHFRPEFINRLDDIVVFHPLDKVQIRQIARIQLRGLEARLRDRGIGLEVSDAALSILGD 808
Query: 664 IGFDLIYGAR 673
IGFD +YGAR
Sbjct: 809 IGFDPVYGAR 818
>gi|359451408|ref|ZP_09240809.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20480]
gi|358042627|dbj|GAA77058.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20480]
Length = 858
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/667 (62%), Positives = 540/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKFRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +++ I L+ +
Sbjct: 395 DEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRSEMQELITDLDGQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLLK +VG +EIAEI+SR TGIPVS+++Q EREKLL +E+ L
Sbjct: 515 LASQAEMQ------DMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREKLLQMEDRLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++
Sbjct: 569 KVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGFMFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D I+K VM+ +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYAILKSKVMDVLISE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS AAL I+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLANQHIKEIADIQLMKLRERLTEMGYLLEISDAALDTIAASGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|444376517|ref|ZP_21175759.1| ClpB protein [Enterovibrio sp. AK16]
gi|443679337|gb|ELT85995.1| ClpB protein [Enterovibrio sp. AK16]
Length = 857
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 543/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+TIDLTEKA GKLDPVIGRD+EIRR +QVLQRR+KNNPV+IGEPGVGKTA
Sbjct: 155 EEARQALEKFTIDLTEKAEQGKLDPVIGRDEEIRRTVQVLQRRTKNNPVIIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRNKRVLSLDMGSLVAGAKYRGEFEERLKSVLNELAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPTVEDTVAILRGLKERYELHHAVEITDPAIVAAASLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERRLIQLKIE +A+ +E DE+SKKRL ++ EI++ E
Sbjct: 395 DEAASSIRMQIDSKPEQLDRLERRLIQLKIEQQALAKENDEASKKRLESLQSEIDEKERD 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK +E+ R ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWNAEKAALSGTQHIKSALEQARTDLDIARRAGDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLLK +V EIAE++SR TGIPV+K+++ E+EKLL +E+ L
Sbjct: 515 LASQAEMQ------EMTLLKNRVTDAEIAEVLSRQTGIPVAKMLEGEKEKLLQMEDELHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+++V+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F++ ++
Sbjct: 569 RVIGQSEAVTSVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLAEFLFDSSDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRN +++MTSNLGSD+I+E + D IK VM+ V +
Sbjct: 689 LLLQVLDDGRLTDGQGRTVDFRNAVVIMTSNLGSDRIQEHFGELDYNGIKAMVMDVVGKH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L +++I SIA IQL L ++ + ++ L+++ AL I++ GF
Sbjct: 749 FRPEFINRVDESVVFHPLGQEHIKSIAGIQLAHLAKRMAERDLKLEVTDEALTLIADAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|398964715|ref|ZP_10680492.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM30]
gi|398148101|gb|EJM36789.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM30]
Length = 854
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAMKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GL+D RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSSQIQEL-VGDREAQRAAVMDALTSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|443468563|ref|ZP_21058770.1| ClpB protein [Pseudomonas pseudoalcaligenes KF707]
gi|442897782|gb|ELS24599.1| ClpB protein [Pseudomonas pseudoalcaligenes KF707]
Length = 854
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L K+T+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKFTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IAEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKGVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEEDEATKKRLAKLEEDILKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ R + A RK D Q +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQARQDMEAARRKGDLQRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E+ L K
Sbjct: 515 MVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVAKMMEGEREKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 LVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSTQIQEL-VGDREAQRAAVMDAVGNHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R I IA IQL L+ +L++ + L++S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGRDQIGGIAEIQLQRLRKRLVERELSLELSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|386312799|ref|YP_006008964.1| ATP-dependent chaperone ClpB [Shewanella putrefaciens 200]
gi|319425424|gb|ADV53498.1| ATP-dependent chaperone ClpB [Shewanella putrefaciens 200]
Length = 857
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/706 (59%), Positives = 556/706 (78%), Gaps = 21/706 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLNELSQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL +++E+ +E K
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLDHLQEELRDVEAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG + +LE+ L
Sbjct: 455 ASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 LASQAEMQ------DMTLLRNKVTEFEIAEVLSKATGIPVSKMLEGEREKLLQMEVALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLARFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI----IKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGSD I+E G ++ +K AVMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSDIIQE---GFGQVTYAEMKAAVMNVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEF+NRID+ +VF L+ NI IA+IQ+ L+ +L + + L+I+ AL I+
Sbjct: 746 THSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKDYTLEITDDALSLIAE 805
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 709
IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 806 IGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGKP 843
>gi|416077717|ref|ZP_11586018.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|348003902|gb|EGY44453.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
Length = 856
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/666 (60%), Positives = 540/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG++ LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EKLL++E L K
Sbjct: 515 QAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLHMEEFLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + + +K VM V YF
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDHAQEGYDTVKSMVMEVVGRYF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ ++F LN++NI IA+IQL L ++ L + A L IS+IG+D
Sbjct: 749 RPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDATLDFISDIGYD 808
Query: 668 LIYGAR 673
I+GAR
Sbjct: 809 PIFGAR 814
>gi|84622886|ref|YP_450258.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84366826|dbj|BAE67984.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 861
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/673 (61%), Positives = 544/673 (80%), Gaps = 16/673 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S + II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKTEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLESDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLER--- 364
+ +L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE+
Sbjct: 455 FYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQML 514
Query: 365 ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
I E D F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+
Sbjct: 515 IANEVEHHD---------FKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDE 565
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 566 LHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDS 625
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
E++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRR+PY+LILLDE+EKA++D
Sbjct: 626 TEAMIRIDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEAVRRRPYALILLDEVEKAHAD 685
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI---IKLAVM 600
VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E +K AVM
Sbjct: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVM 745
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+
Sbjct: 746 GVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLRLDLDDAALEL 805
Query: 661 ISNIGFDLIYGAR 673
+ N+GFD +YGAR
Sbjct: 806 LGNVGFDPVYGAR 818
>gi|422641872|ref|ZP_16705293.1| AAA ATPase, central region, partial [Pseudomonas syringae Cit 7]
gi|330954257|gb|EGH54517.1| AAA ATPase, central region [Pseudomonas syringae Cit 7]
Length = 793
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/646 (64%), Positives = 530/646 (82%), Gaps = 7/646 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQGEIQRLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 653
RPEF+NRID++++F L R I I +IQL L+ +L + + L I
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELLLNI 793
>gi|126173263|ref|YP_001049412.1| ATPase [Shewanella baltica OS155]
gi|152999622|ref|YP_001365303.1| ATPase [Shewanella baltica OS185]
gi|160874241|ref|YP_001553557.1| ATPase AAA-2 domain-containing protein [Shewanella baltica OS195]
gi|217974426|ref|YP_002359177.1| ATP-dependent chaperone ClpB [Shewanella baltica OS223]
gi|373948486|ref|ZP_09608447.1| ATP-dependent chaperone ClpB [Shewanella baltica OS183]
gi|378707486|ref|YP_005272380.1| ATP-dependent chaperone ClpB [Shewanella baltica OS678]
gi|386325670|ref|YP_006021787.1| ATP-dependent chaperone ClpB [Shewanella baltica BA175]
gi|386340025|ref|YP_006036391.1| ATP-dependent chaperone ClpB [Shewanella baltica OS117]
gi|418024125|ref|ZP_12663108.1| ATP-dependent chaperone ClpB [Shewanella baltica OS625]
gi|125996468|gb|ABN60543.1| ATPase AAA-2 domain protein [Shewanella baltica OS155]
gi|151364240|gb|ABS07240.1| ATPase AAA-2 domain protein [Shewanella baltica OS185]
gi|160859763|gb|ABX48297.1| ATP-dependent chaperone ClpB [Shewanella baltica OS195]
gi|217499561|gb|ACK47754.1| ATP-dependent chaperone ClpB [Shewanella baltica OS223]
gi|315266475|gb|ADT93328.1| ATP-dependent chaperone ClpB [Shewanella baltica OS678]
gi|333819815|gb|AEG12481.1| ATP-dependent chaperone ClpB [Shewanella baltica BA175]
gi|334862426|gb|AEH12897.1| ATP-dependent chaperone ClpB [Shewanella baltica OS117]
gi|353536085|gb|EHC05644.1| ATP-dependent chaperone ClpB [Shewanella baltica OS625]
gi|373885086|gb|EHQ13978.1| ATP-dependent chaperone ClpB [Shewanella baltica OS183]
Length = 857
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/706 (59%), Positives = 556/706 (78%), Gaps = 21/706 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLNELAQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL +++E+ +E K
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLDHLQEELRDVEAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG + +LE+ L
Sbjct: 455 ASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 LASQAEMQ------DMTLLRNKVTEFEIAEVLSKATGIPVSKMLEGEREKLLQMEVALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLARFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI----IKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G ++ +K AVMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFGQVTYAEMKAAVMNVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEF+NRID+ +VF L+ NI IA+IQ+ L+ +L + + L+I+ AL I+
Sbjct: 746 THSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKDYTLEITDDALSLIAE 805
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 709
IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 806 IGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGKP 843
>gi|294634722|ref|ZP_06713253.1| ATP-dependent chaperone protein ClpB [Edwardsiella tarda ATCC
23685]
gi|451966850|ref|ZP_21920100.1| chaperone protein ClpB [Edwardsiella tarda NBRC 105688]
gi|291091852|gb|EFE24413.1| ATP-dependent chaperone protein ClpB [Edwardsiella tarda ATCC
23685]
gi|451314387|dbj|GAC65462.1| chaperone protein ClpB [Edwardsiella tarda NBRC 105688]
Length = 857
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/670 (61%), Positives = 541/670 (80%), Gaps = 13/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNDLAKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++ E+ + E
Sbjct: 395 DEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKKRLEILNSELEEKERD 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG+L LE+ L+
Sbjct: 455 YASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMSEIQYGKLPDLEKQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E+ L K
Sbjct: 515 SATQAE------GKSMKLLRNKVTDVEIAEVLARWTGIPVSRMLEGEREKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVVGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EMEKGDKEIIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ E+ G+ +K VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGELSYGE---MKELVMSVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+FRPEFINRID+ +VF L ++NI +IA IQL L +L + + +S+AAL ++S
Sbjct: 746 THHFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKGYSVTMSEAALDQLSQ 805
Query: 664 IGFDLIYGAR 673
GFD +YGAR
Sbjct: 806 AGFDPVYGAR 815
>gi|237801872|ref|ZP_04590333.1| clpB protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024730|gb|EGI04786.1| clpB protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 854
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/666 (63%), Positives = 543/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++ EI +LE++
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQGEIERLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVSTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|120553812|ref|YP_958163.1| ATPase [Marinobacter aquaeolei VT8]
gi|120323661|gb|ABM17976.1| ATPase AAA-2 domain protein [Marinobacter aquaeolei VT8]
Length = 859
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/668 (61%), Positives = 536/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALSKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L KK+L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYR+ IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRENIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL + I +E +
Sbjct: 395 DEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKKRLEELSAVIGNVERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK + SQ+IK ++E+ R+ + A R D +S+L+YG++ +LER L
Sbjct: 455 YADLEEVWNTEKAALHGSQKIKSQLEQARIDLENARRAGDLGKMSELQYGKIPELERQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++ + LL+ +V EEIAEIVS+ TGIPVSK+++ ER+KL+ +E L
Sbjct: 515 MASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLEGERDKLMRMEEALHD 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALANFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS I+E + G++ E +K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSHIIQE-KAGEENYEDMKSAVMEVVGS 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINR+D+++VF L I IA IQ+ L +L +M L++ ++ ++ +G
Sbjct: 748 HFRPEFINRVDEVVVFHPLAESQIQGIARIQIENLARRLKDQDMKLELGDDVMQLLAEVG 807
Query: 666 FDLIYGAR 673
+D +YGAR
Sbjct: 808 YDPVYGAR 815
>gi|429212832|ref|ZP_19203997.1| ClpB protein [Pseudomonas sp. M1]
gi|428157314|gb|EKX03862.1| ClpB protein [Pseudomonas sp. M1]
Length = 854
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELSKQEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEEDIAKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKTELELARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E+ L K
Sbjct: 515 MVDQ------HGKAENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-VGDQEAQRAAVMDAVNAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQ+ L+ +L + + L++S A+ K+ +GFD
Sbjct: 748 RPEFINRIDEVVVFEPLAREQIAGIAEIQMGRLRKRLAERELSLELSTEAMDKLIAVGFD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|365967014|ref|YP_004948576.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365745927|gb|AEW76832.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 856
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/666 (60%), Positives = 540/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG++ LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EKLL++E L K
Sbjct: 515 QAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLHMEEFLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + + +K VM V YF
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDHAQEGYDTVKSMVMEVVGHYF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ ++F LN++NI IA+IQL L ++ L + A L IS+IG+D
Sbjct: 749 RPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDATLDFISDIGYD 808
Query: 668 LIYGAR 673
I+GAR
Sbjct: 809 PIFGAR 814
>gi|419846184|ref|ZP_14369441.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK2019]
gi|386414479|gb|EIJ29035.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK2019]
Length = 856
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 538/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLDMLEKELADKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDAAKTEMEQARRAGDLSKMSELQYGRIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 AAE------TGEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESYGEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + NI +IA+IQL L ++ +L ++A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELVFTEALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|359299621|ref|ZP_09185460.1| ATP-dependent Clp protease subunit B [Haemophilus [parainfluenzae]
CCUG 13788]
Length = 858
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/706 (58%), Positives = 566/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE LKKYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 154 EETRQALKKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 213
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 214 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 273
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 274 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 333
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 334 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 393
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 394 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELAAKERE 453
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+ +++A R+++++ +S+L+YG++ LE+ L+
Sbjct: 454 YSELEEVWKAEKSALLGTQHIKTELENARIAMDQARRENNFEKMSELQYGKIPALEKQLQ 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 514 EAVKREEEGSEN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++ ++
Sbjct: 570 RVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFLFDDPDA 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 630 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + +K VM+ V +F
Sbjct: 690 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEAPEASYAEMKALVMSVVGQHF 749
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L +++I +IA IQL L ++ + ++ ++ A+ I GFD
Sbjct: 750 RPEFINRIDETVVFHPLGQEHIRAIALIQLERLIKRMAERGYEVTVTDNAIDHIGKAGFD 809
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 810 PLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVVD 847
>gi|261867258|ref|YP_003255180.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415767634|ref|ZP_11483306.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|261412590|gb|ACX81961.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348658570|gb|EGY76138.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-2]
Length = 856
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/666 (60%), Positives = 540/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG++ LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EKLL++E L K
Sbjct: 515 QAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLHMEEFLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MMRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + + +K VM V YF
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDHAQEGYDTVKSMVMEVVGRYF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ ++F LN++NI IA+IQL L ++ L + A L IS+IG+D
Sbjct: 749 RPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDATLDFISDIGYD 808
Query: 668 LIYGAR 673
I+GAR
Sbjct: 809 PIFGAR 814
>gi|389793058|ref|ZP_10196234.1| ATP-dependent chaperone ClpB [Rhodanobacter fulvus Jip2]
gi|388435195|gb|EIL92112.1| ATP-dependent chaperone ClpB [Rhodanobacter fulvus Jip2]
Length = 865
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/672 (61%), Positives = 540/672 (80%), Gaps = 12/672 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KY IDLTE+A KLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYCIDLTERAERNKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRII GEVP L +++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIIKGEVPEGLRDRRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYIADRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D SK+RL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQRLADLETDIEKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L +IWK EK ++ + ++KE+IE+ ++ A R D+ +S+++YG+L LE+ L
Sbjct: 455 FSDLNEIWKSEKAALQGTTKVKEQIEQASQELEAARRAQDYARMSEIQYGKLPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ Q F L++TKV ++EIAE+V+R TGIPVSK+++ ER+KLL +E+ L +
Sbjct: 515 VAQAAETQ------DFKLVQTKVTADEIAEVVARWTGIPVSKMLEGERDKLLKMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AV++AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ ++
Sbjct: 569 RVVGQDEAVHAVADAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFMFDTTDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKE----IIKLAVMN 601
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++ + GD E +K +VM
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDASESSGDAEEQYTQMKASVMG 748
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+D+I+VFR L++ I +IA IQL L+ +L + + + +S AL +
Sbjct: 749 VVQAHFRPEFINRLDEIVVFRPLDKTQIRAIARIQLQYLEKRLAERQLKMDVSDEALTLL 808
Query: 662 SNIGFDLIYGAR 673
N+GFD +YGAR
Sbjct: 809 GNVGFDPVYGAR 820
>gi|419801894|ref|ZP_14327097.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK262]
gi|385192261|gb|EIF39667.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK262]
Length = 856
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/666 (60%), Positives = 538/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTASAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE++ E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLDMLEKELSDKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGSQHIKQELDAAKTEMEQARRAGDLSKMSELQYGRIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ +LL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E L K
Sbjct: 515 AAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESYGEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + NI +IA+IQL L ++ +L ++A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELVFTEALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|399543782|ref|YP_006557090.1| chaperone protein ClpB [Marinobacter sp. BSs20148]
gi|399159114|gb|AFP29677.1| Chaperone protein ClpB [Marinobacter sp. BSs20148]
Length = 858
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/668 (61%), Positives = 543/668 (81%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYTIDLTE A GKLDPVIGRDDEIRR IQVLQRR KNNPVLIG+PGVGKTA
Sbjct: 155 EENRQALDKYTIDLTEMAESGKLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGDPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +LKE++ + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLKELTKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR++IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKHIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+T++ILRGL+++YEVHHGVEITD AI+AA++LS RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPSEEDTVAILRGLKERYEVHHGVEITDSAIIAAAKLSSRYIADRKLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL + I+ +E +
Sbjct: 395 DEAGSQIRMEMDSKPEPLDRLERRLIQLKIEREALKKETDPASKKRLEELSSVIDGVERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK + SQ+IK E+E+ R ++ A R D +S+L+YG + +LER L
Sbjct: 455 YADLEEVWNAEKAALHGSQKIKSELEQARTELESARRAGDLGRMSELQYGHIPELERQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++ + TLL+ +V EEIAEIVS+ TGIPVSK+++ ER+KL+ +E L K
Sbjct: 515 MASQAEMM------EMTLLRNRVTEEEIAEIVSKWTGIPVSKMLEGERDKLMRMEEALHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+ +++
Sbjct: 569 RVIGQNEAVEAVANAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTELCKALASFLFDTDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ G++ + +K VM+EV
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSGIIQR-HAGEENYDAMKALVMDEVGT 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINR+D+++VF L I IA +Q+ +L +L + ++ L++ ++A+ ++N+G
Sbjct: 748 HFRPEFINRVDEVVVFHPLEANQIRGIAKVQIELLDKRLRQQDIALELDESAMTLLANVG 807
Query: 666 FDLIYGAR 673
+D +YGAR
Sbjct: 808 YDPVYGAR 815
>gi|260912679|ref|ZP_05919165.1| ATP-dependent chaperone ClpB [Pasteurella dagmatis ATCC 43325]
gi|260633057|gb|EEX51222.1| ATP-dependent chaperone ClpB [Pasteurella dagmatis ATCC 43325]
Length = 855
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 538/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 154 EENRQALDKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 213
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 214 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVI 273
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 274 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 333
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 334 KVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 393
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 394 DEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLEMLEKELGEKERE 453
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG + LE+ L
Sbjct: 454 YAELEDVWKAEKAALSGTQHIKAELDNAKTQMEQARRASDFAKMSELQYGVIPTLEKQLA 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E+ L K
Sbjct: 514 QAESAE------GKEMTLLRHRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEDELHK 567
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EAI AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +
Sbjct: 568 RVIGQHEAIEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENA 627
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 628 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 687
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E ++ D + +K VM+ V +F
Sbjct: 688 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENKEADYDSMKALVMSVVGQHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA IQL L ++ L + A L I +G+D
Sbjct: 748 RPEFINRIDETVVFHPLGKENIRAIATIQLQRLIKRMESHGYQLHFTDACLDFIGEVGYD 807
Query: 668 LIYGAR 673
IYGAR
Sbjct: 808 PIYGAR 813
>gi|392536450|ref|ZP_10283587.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas arctica A
37-1-2]
Length = 858
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/667 (62%), Positives = 541/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +++ I L+ +
Sbjct: 395 DEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRAEMQELITDLDGQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLLK +VG +EIAEI+SR TGIPV++++Q EREKLL +E+ L
Sbjct: 515 LASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQGEREKLLQMEDKLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++
Sbjct: 569 KVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGFMFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K VM +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLKAKVMEVLINE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS AAL++I+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEISDAALERIAESGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|89075037|ref|ZP_01161478.1| putative clpB, ATPase with chaperone activity [Photobacterium sp.
SKA34]
gi|89049124|gb|EAR54689.1| putative clpB, ATPase with chaperone activity [Photobacterium sp.
SKA34]
Length = 858
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/667 (62%), Positives = 542/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTA
Sbjct: 155 EENRQALEKYTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L E+S +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERLKAVLNELSQEDGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E D +S KRL + +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKEDDAASNKRLSDLLEELDLKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK E+E+ R + A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + TLLK KV EIA+++S+ TGIPVSK+++ ER+KLL +E+ L
Sbjct: 515 LAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVSKMLEGERDKLLRMEDELHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L+ +F++EE+
Sbjct: 569 RVIGQDEAVVAVANAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSLANFMFDSEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E D E IK VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGNLDYEGIKALVMDVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L ++NI +IA+IQL LK +L + + L + +AL I+ GF
Sbjct: 749 FRPEFINRVDETVVFHPLGKENIKNIASIQLERLKKRLAENDFRLDVEDSALDMIAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|315126101|ref|YP_004068104.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas sp. SM9913]
gi|315014615|gb|ADT67953.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas sp. SM9913]
Length = 858
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/667 (62%), Positives = 540/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLKIE A+ +E DE+S+KR + + I +LE +
Sbjct: 395 DEAGSSIRLQIDSKPEALDKLERRIIQLKIEDNALAKEKDEASQKRRTEMVELITELEGQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + +LLK +VG +EIAEI+SR TGIPV++++Q EREKLL +E L
Sbjct: 515 LASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVARMLQGEREKLLQMEEQLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E +
Sbjct: 569 KVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGYMFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D + +K VM +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGSNDYDELKAKVMGVLHNE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L+ +I IA+IQL+ L+ +L +M L+++ AAL++I+ GF
Sbjct: 749 FRPEFINRIDETVVFHSLSHSHIKEIADIQLSKLRQRLTEMGYLLELTDAALERIAASGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|348028567|ref|YP_004871253.1| ClpB protein [Glaciecola nitratireducens FR1064]
gi|347945910|gb|AEP29260.1| ClpB protein [Glaciecola nitratireducens FR1064]
Length = 856
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/661 (63%), Positives = 540/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTMDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L E+S + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGSLLAGAKYRGEFEERLKAVLNELSKEEGKVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V++
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVQVDQ 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ LS RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVNITDPAIVAAARLSNRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKP+ MDKLERR+IQLK+E +A+ +E D +S KRL +I+ E +LE K+ +L+K
Sbjct: 401 IRMQIDSKPDEMDKLERRIIQLKLEEQALSKETDTASLKRLEVIEIEREQLEQKFGDLDK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ +Q IK E+E+ +L + A R SD +S+L+YG + +LE L++ S+ D
Sbjct: 461 IWRAEKNAMQGTQFIKGELEQAKLDLEIARRASDLSRMSELQYGRIPELELKLEQASESD 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
I + L+K KV EIA+++SR TGIPVSK++ E++KL+++E+ + KRV+GQ
Sbjct: 521 IM------ETQLIKNKVTENEIADVLSRWTGIPVSKMLDSEKDKLVSMEDTIGKRVIGQR 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCK+L+ +F+ E++++RIDM
Sbjct: 575 EAVVAVSNAIRRSRAGLADPDKPTGSFLFLGPTGVGKTELCKSLANFLFDTEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK-EMEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+ + E +K VM EV +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNTLIIMTSNLGSDIIQGHTDDSTYEEMKKQVMVEVSAHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DDI+VF L R+ I SIA IQL L+ +L +M + L+IS AAL I++ GFD +YGA
Sbjct: 755 NRVDDIVVFHSLGREEIKSIAKIQLLGLRQRLQEMGLKLEISGAALDIIADAGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|336312569|ref|ZP_08567517.1| ClpB protein [Shewanella sp. HN-41]
gi|335863813|gb|EGM68935.1| ClpB protein [Shewanella sp. HN-41]
Length = 857
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/706 (59%), Positives = 558/706 (79%), Gaps = 21/706 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLNELAQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE++D+LERR IQLK+E +A+ +E DE+S++RL ++ E++++E K
Sbjct: 395 DEAASSIRMQMDSKPELLDRLERRAIQLKLEEQALAKENDEASRRRLDHLRVELHEVEAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG + +LE+ L
Sbjct: 455 ASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 LASQAEMQ------DMTLLRNKVTELEIAEVLSKATGIPVSKMLEGEREKLLQMEVALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLARFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKEIIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E + G+ +K +VMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQEGFGHVSYGE---MKASVMNVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEF+NRID+ +VF L+ NI IA+IQ+ L+ +L + + L+I+ AL I+
Sbjct: 746 THSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKDYTLEITDDALSLIAE 805
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 709
IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 806 IGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGKP 843
>gi|307246005|ref|ZP_07528087.1| hypothetical protein appser1_12060 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306852940|gb|EFM85163.1| hypothetical protein appser1_12060 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 857
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/706 (58%), Positives = 564/706 (79%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+I DPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQIIDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLH 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+ KV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGSEN----QLLRAKVTEEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AAL I GFD
Sbjct: 749 RPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAALDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P + I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVVD 846
>gi|323497828|ref|ZP_08102842.1| hypothetical protein VISI1226_18161 [Vibrio sinaloensis DSM 21326]
gi|323317175|gb|EGA70172.1| hypothetical protein VISI1226_18161 [Vibrio sinaloensis DSM 21326]
Length = 857
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 539/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDE+
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+++ E ++A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLNILNEELSEKEREFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVSDNEIAEVLSKQTGIPVSKMLEAEKEKLLQMEQFLHKRVIGQT 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D E +K VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFGALDYEGMKQQVMEVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L ++ + L++S+ AL I+ +GFD ++GA
Sbjct: 755 NRVDESVVFHPLAQEHIKSIASIQLKRLSERMEEKGYSLEVSEKALDLIAQVGFDPVFGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|429334365|ref|ZP_19215031.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida CSV86]
gi|428760942|gb|EKX83190.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida CSV86]
Length = 854
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAALKRLEKLTEEIARLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E+LL +
Sbjct: 515 MVDQ------HGKADNQLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLKMESLLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+++ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQDL-VGDREAQRAAVMDAVGAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R I I IQL L+++L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGRDQIAGITQIQLGRLRSRLAERELSLELSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|238921070|ref|YP_002934585.1| ATP-dependent chaperone protein ClpB, putative [Edwardsiella
ictaluri 93-146]
gi|238870639|gb|ACR70350.1| ATP-dependent chaperone protein ClpB, putative [Edwardsiella
ictaluri 93-146]
Length = 857
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/668 (61%), Positives = 539/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALNKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERLKAVLNDLAKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++ E+ + E
Sbjct: 395 DEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKKRLEILNIELEEKERD 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG+L LE+ L+
Sbjct: 455 YASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMSEIQYGKLPDLEKQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L K
Sbjct: 515 AATQAE------GKSMKLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEGELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVVGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ GD+ +K VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQD-RFGDQSYGEMKALVMSVVTH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+ +VF L ++NI +IA IQL L +L + + +S+AAL ++S G
Sbjct: 748 HFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKGYSVTMSEAALDQLSQAG 807
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 808 FDPVYGAR 815
>gi|148978564|ref|ZP_01815016.1| ClpB protein [Vibrionales bacterium SWAT-3]
gi|145962353|gb|EDK27634.1| ClpB protein [Vibrionales bacterium SWAT-3]
Length = 857
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 539/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDE+
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL ++ E++ E +A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTLQAELSDKERDFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQG 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F+++++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFNTLDYQGIKNEVMEVVGKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL LK ++ +L++S+ ALK IS +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIQSIASIQLEHLKKRMEDNGYELEVSEKALKLISQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|332535268|ref|ZP_08411070.1| protein ClpB [Pseudoalteromonas haloplanktis ANT/505]
gi|332035299|gb|EGI71803.1| protein ClpB [Pseudoalteromonas haloplanktis ANT/505]
Length = 858
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/667 (62%), Positives = 541/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +++ I L+ +
Sbjct: 395 DEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRTEMQELITDLDGQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLLK +VG +EIAEI+SR TGIPV++++Q EREKLL +E+ L
Sbjct: 515 LASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQGEREKLLQMEDKLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++
Sbjct: 569 KVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGFMFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K VM +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLKAKVMEVLINE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS AAL++I+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEISDAALERIAASGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|119470043|ref|ZP_01612848.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Alteromonadales bacterium
TW-7]
gi|392537038|ref|ZP_10284175.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas marina
mano4]
gi|119446753|gb|EAW28026.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Alteromonadales bacterium
TW-7]
Length = 858
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/667 (62%), Positives = 539/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKFRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +++ I L+ +
Sbjct: 395 DEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRSEMQELITDLDGQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLLK +VG +EIAEI+SR TGIPVS+++Q EREKLL +E+ L
Sbjct: 515 LASQAEMQ------DMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREKLLQMEDRLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++
Sbjct: 569 KVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGFMFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K VM+ +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYATLKSKVMDVLISE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS AAL I+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLANQHIKEIADIQLMKLRERLTEMGYLLEISDAALDTIAASGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|257454777|ref|ZP_05620028.1| ATP-dependent chaperone protein ClpB [Enhydrobacter aerosaccus
SK60]
gi|257447710|gb|EEV22702.1| ATP-dependent chaperone protein ClpB [Enhydrobacter aerosaccus
SK60]
Length = 865
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/667 (59%), Positives = 543/667 (81%), Gaps = 1/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLT +A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDALNKYTIDLTARAESGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQ+I+NG+VP L +K++L LD+ L+AG K+RGEFE+RLK +L +++ ++ +I
Sbjct: 212 IVEGLAQKIVNGDVPEGLRNKRVLSLDLGALIAGAKFRGEFEERLKAVLNDLAKSEGQVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S RYI+DR +PDKAIDL+
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSNRYITDRMLPDKAIDLV 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E+DSKPE + KL+ RLIQLK++ E +K E DE +K +L L+ +I++LE +
Sbjct: 392 DEAASRLKMELDSKPEALGKLDSRLIQLKMQRETLKHEDDEGAKSQLKLLDTQISELEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L +IW+ EK L+K SQQ+K+E++K R+ KA R+ D++T+SKL+Y + +LE+ +K
Sbjct: 452 YADLNEIWQAEKALVKGSQQLKDELDKARIAYEKAQREGDYETMSKLQYETIPQLEKRIK 511
Query: 368 EKS-QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+ + + A LL+ KV EIAE+V+ TGIPV+K++Q EREK+L++E L
Sbjct: 512 DSDLAEQKEQAGEAPSVKLLRNKVTENEIAEVVAAATGIPVAKMMQGEREKMLHMEEKLH 571
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+RVVGQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L++ +F++E
Sbjct: 572 ERVVGQDEAVQAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALASFLFDDEN 631
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRR+PYS++L DE+EKA+ DVF
Sbjct: 632 AMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRRPYSVVLFDEVEKAHPDVF 691
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
NILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM E IK AVMN V +
Sbjct: 692 NILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMAGDSYEEIKAAVMNSVNQH 751
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+I+VF L ++ + IA+IQL+ L+ +L + +M++ +S A+ ++ +G+
Sbjct: 752 FRPEFVNRIDEIVVFHPLGQEQMAGIADIQLSRLRKRLQERDMNIVLSDEAMSQLVAVGY 811
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 812 DPVYGAR 818
>gi|387121076|ref|YP_006286959.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|416032186|ref|ZP_11572737.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|416045010|ref|ZP_11575193.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|429732491|ref|ZP_19267101.1| ATP-dependent chaperone protein ClpB [Aggregatibacter
actinomycetemcomitans Y4]
gi|347995838|gb|EGY36981.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|348000240|gb|EGY41029.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|385875568|gb|AFI87127.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|429155999|gb|EKX98641.1| ATP-dependent chaperone protein ClpB [Aggregatibacter
actinomycetemcomitans Y4]
Length = 856
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/666 (60%), Positives = 538/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTACAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG++ LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E L K
Sbjct: 515 QAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEFLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM V YF
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHAQEGYDTVKSMVMEVVGRYF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ ++F LN++NI IA+IQL L ++ L + A L IS+IG+D
Sbjct: 749 RPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDATLDFISDIGYD 808
Query: 668 LIYGAR 673
I+GAR
Sbjct: 809 PIFGAR 814
>gi|359440613|ref|ZP_09230527.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20429]
gi|358037648|dbj|GAA66776.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20429]
Length = 858
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/667 (62%), Positives = 541/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +++ I L+ +
Sbjct: 395 DEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRAEMQELITDLDGQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLLK +VG +EIAEI+SR TGIPV++++Q EREKLL +E+ L
Sbjct: 515 LASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQGEREKLLQMEDKLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++
Sbjct: 569 KVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGFMFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K VM +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLKAKVMEVLINE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS AAL++I+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEISDAALERIAESGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|398850111|ref|ZP_10606819.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM80]
gi|398986108|ref|ZP_10691379.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM24]
gi|399011818|ref|ZP_10714148.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM16]
gi|398117402|gb|EJM07154.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM16]
gi|398152896|gb|EJM41406.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM24]
gi|398249473|gb|EJN34859.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM80]
Length = 854
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAMKRLEKLQEEIVRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL K
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDREAQRAAVMDALTSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+ +L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRTRLAERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|387774041|ref|ZP_10129321.1| ATP-dependent chaperone protein ClpB [Haemophilus parahaemolyticus
HK385]
gi|386903128|gb|EIJ67948.1| ATP-dependent chaperone protein ClpB [Haemophilus parahaemolyticus
HK385]
Length = 857
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/706 (58%), Positives = 565/706 (80%), Gaps = 12/706 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAAVLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTAKERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+ + +A R+++ + +S+L+YG++ LE+ L+
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIAMEQARRENNLEKMSELQYGKIPALEKQLQ 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E++KLL +E++L
Sbjct: 513 EAVKREEEGGEN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKDKLLRMESVLHA 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GA PGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGASPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+EM + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPEATYGELKEVVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L +++I SIA IQL L ++ + ++ I+ AA+ I GFD
Sbjct: 749 RPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRIAERGYEVTITDAAIDHIGKAGFD 808
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 809 PLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVVD 846
>gi|359432252|ref|ZP_09222642.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20652]
gi|357921104|dbj|GAA58891.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20652]
Length = 858
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/667 (62%), Positives = 541/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +++ I L+ +
Sbjct: 395 DEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRAEMQELITDLDGQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLLK +VG +EIAEI+SR TGIPV++++Q EREKLL +E+ L
Sbjct: 515 LASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQGEREKLLQMEDKLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++
Sbjct: 569 KVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGFMFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K VM +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLKAKVMEVLINE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS AAL++I+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEISDAALERIAESGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|409202084|ref|ZP_11230287.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas
flavipulchra JG1]
Length = 857
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/661 (62%), Positives = 536/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L SK++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDE+
Sbjct: 221 QRIINGEVPEGLKSKRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGQVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA +
Sbjct: 341 PTVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSHRYISDRQLPDKAIDLIDEAGSS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+LERR+IQLK+E A+ +E DE+S+KR ++ IN+LE +Y L++
Sbjct: 401 IRLQIDSKPEQLDRLERRIIQLKLEDNALAKEKDEASQKRRTEMQTLINELEAEYRELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L SQ +
Sbjct: 461 VWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYGRIPELERKLDLASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + +LLK +VG +EIAEI+SR TGIPV+K++Q EREKLL +E+ L K+V+GQD
Sbjct: 521 MQ------EMSLLKNQVGEDEIAEILSRWTGIPVAKMLQGEREKLLQMEDELHKKVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++++RIDM
Sbjct: 575 EAVNAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALANFMFDTEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E D +K VM + FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDVIQEQAGNNDYATLKERVMAVLASQFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L ++I IA+IQL+ L +L + L++S AAL KI+ GFD +YGA
Sbjct: 755 NRIDETVVFHPLINEHIKEIASIQLDRLSKRLTEKGFALELSDAALDKIAASGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|221135104|ref|ZP_03561407.1| ATPase AAA-2 [Glaciecola sp. HTCC2999]
Length = 859
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 535/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKYTSDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E+S + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+L+++
Sbjct: 281 HTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLIDQ 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE MDKL+RR+IQLK+E +A+ +E DE+S KRL +I+ E E +Y LE
Sbjct: 401 IRMQIDSKPEEMDKLDRRIIQLKLEEQALAKESDEASLKRLDIIQVERETAESRYKALET 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK ++ +Q IK ++E+ + ++ A R D +S+L+YG + LE+ L+ + D
Sbjct: 461 IWLTEKDAMQGAQGIKAQLEQAKQDMDIARRAGDLNRMSELQYGRIPALEQQLENANTAD 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
P L+K KV EIA+++SR TGIPV+K+++ ER+KL+ +E +L RV+GQD
Sbjct: 521 EVTPQ------LVKNKVTDVEIADVLSRWTGIPVAKMLEGERDKLVRMETVLHDRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCK+L+ +F++++S++RIDM
Sbjct: 575 EAVKCVSNAIRRSRAGLADPAKPIGSFLFLGPTGVGKTELCKSLADFLFDSQDSMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D + +K +VMN V ++FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDVIQEQAHQQDYDAMKASVMNTVAMHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DDI+VF L NI SIA IQL L+ +L +L IS AAL KI+++GFD ++GA
Sbjct: 755 NRVDDIVVFHPLALDNIKSIAKIQLQGLRQRLQDKGFELSISGAALNKIADVGFDPVFGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|359439012|ref|ZP_09228992.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20311]
gi|359444692|ref|ZP_09234463.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20439]
gi|358026246|dbj|GAA65241.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20311]
gi|358041528|dbj|GAA70712.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20439]
Length = 858
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/667 (62%), Positives = 540/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLKIE A+ +E DE+S+KR + + I +LE++
Sbjct: 395 DEAGSSIRLQIDSKPEALDKLERRIIQLKIEDNALAKEKDEASQKRRAEMVELITELEVQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + +LLK +VG +EIAEI+SR TGIPV++++Q EREKLL +E L
Sbjct: 515 LASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVARMLQGEREKLLQMEEQLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E +
Sbjct: 569 KVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGYMFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+N++I+MTSNLGSD I+E D + +K VM +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNSVIIMTSNLGSDIIQEQAGNNDYDELKNKVMGVLHNE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L +I IA+IQL+ L+ +L +M L+++ AAL++I+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLAHSHIKEIADIQLSKLRERLTEMGYLLELTDAALERIAASGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|398980981|ref|ZP_10689213.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM25]
gi|398134012|gb|EJM23188.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM25]
Length = 854
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI + E +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIKRLEKLQEEIVRHERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSMQIQEL-VGDREAQRAAVMDAISTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+++L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLELSPEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|425066581|ref|ZP_18469701.1| ClpB protein [Pasteurella multocida subsp. gallicida P1059]
gi|404381369|gb|EJZ77846.1| ClpB protein [Pasteurella multocida subsp. gallicida P1059]
Length = 855
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 534/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 154 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 213
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 214 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 273
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 274 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 333
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 334 KVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI 393
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+++ E +
Sbjct: 394 DEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDEASRKRLAMLEKELSEKERE 453
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG + LE+ L
Sbjct: 454 YAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYGVIPALEKQLA 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E L K
Sbjct: 514 QAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEELHK 567
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +
Sbjct: 568 RVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENA 627
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 628 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 687
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K VM+ V +F
Sbjct: 688 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYPSMKELVMSVVGQHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI IA IQL L ++ L + A L I +G+D
Sbjct: 748 RPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDFIGEVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|416068136|ref|ZP_11582660.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348001380|gb|EGY42128.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 856
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/666 (60%), Positives = 538/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLT A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTMDLTACAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG++ LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E L K
Sbjct: 515 QAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEFLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM V YF
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHAQEGYDTVKSMVMEVVGRYF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ ++F LN++NI IA+IQL L ++ L + A L IS+IG+D
Sbjct: 749 RPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDATLDFISDIGYD 808
Query: 668 LIYGAR 673
I+GAR
Sbjct: 809 PIFGAR 814
>gi|404402810|ref|ZP_10994394.1| chaperone [Pseudomonas fuscovaginae UPB0736]
Length = 854
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL ++++I++LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEDDEAAIKRLDKLQEDISRLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E+LL +
Sbjct: 515 MVDQ------HGHSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLKMESLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQSEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSVQIQEL-AGDREAQRAAVMDALGSHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINR+D++++F L R I I IQL L+ +L + + L +S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLALSDEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|414072182|ref|ZP_11408133.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. Bsw20308]
gi|410805399|gb|EKS11414.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. Bsw20308]
Length = 858
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/667 (62%), Positives = 541/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +++ I L+ +
Sbjct: 395 DEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRAEMQELITDLDGQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLLK +VG +EIAEI+SR TGIPVS+++Q EREKLL +E+ L
Sbjct: 515 LASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREKLLQMEDKLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++
Sbjct: 569 KVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGFMFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K VM+ +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLKAKVMDVLINE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+I+ AL++I+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEITDTALERIAASGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|149190363|ref|ZP_01868636.1| ClpB protein [Vibrio shilonii AK1]
gi|148835852|gb|EDL52816.1| ClpB protein [Vibrio shilonii AK1]
Length = 857
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/667 (61%), Positives = 540/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTA
Sbjct: 155 EEKRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II
Sbjct: 215 IVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLNELAKEEGNII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +DKLER++IQLKIE +A+K E D +S+KRLL + +E+ E
Sbjct: 395 DEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALKNESDNASEKRLLALNEELESKERD 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK E+E+ RL ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWNAEKAALSGTQHIKSELEQARLDMDVARRAGDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ KV EIAE++S+ TGIPVSK+++ E++KLL +E++L K
Sbjct: 515 LATQAEMQ------EMSLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKDKLLKMEDVLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ VS+AIRRSR+GL+D RP GSF+FLGPTGVGKTELCKTL++ +F++E++
Sbjct: 569 RVIGQAEAVEVVSDAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKTLASFMFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D E IK VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFQVLDYEGIKREVMDVVTSH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
F+PEF+NR+D+ +VF L ++I SIA IQL L ++ L ++ AAL I+ +G+
Sbjct: 749 FKPEFLNRVDESVVFHPLGAEHIKSIAGIQLQRLGKRMEDNGYHLVVADAALDYIAKVGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|399521946|ref|ZP_10762611.1| ATPase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109981|emb|CCH39171.1| ATPase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 854
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/668 (62%), Positives = 548/668 (82%), Gaps = 11/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+ + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELGKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLEKLEDDIAKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG + LER L
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKTELEAARRKGDLNRMAELQYGIIPDLERSL- 513
Query: 368 EKSQKDIQLPNNANKF--TLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
Q+ + K LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E+LL
Sbjct: 514 -------QMVDAHGKAENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLKMEDLL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ E
Sbjct: 567 HQRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTE 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DV
Sbjct: 627 EALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 605
FN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GDKE + AVM+ V
Sbjct: 687 FNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDKEAQRAAVMDAVGS 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R+ I IA IQL L+++L + + L+++ AL K+ +G
Sbjct: 746 HFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRSRLAERELSLELTPEALDKLIAVG 805
Query: 666 FDLIYGAR 673
+D +YGAR
Sbjct: 806 YDPVYGAR 813
>gi|90580379|ref|ZP_01236186.1| putative clpB, ATPase with chaperone activity [Photobacterium
angustum S14]
gi|90438681|gb|EAS63865.1| putative clpB, ATPase with chaperone activity [Vibrio angustum S14]
Length = 858
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/667 (62%), Positives = 540/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L E+S +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERLKAVLNELSQEDGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E D +S K L + +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKEDDAASNKHLSDLLEELDLKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK E+E+ R + A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + TLLK KV EIA+++S+ TGIPVSK+++ ER+KLL +E+ L
Sbjct: 515 LAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVSKMLEGERDKLLRMEDELHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L+ +F++EE+
Sbjct: 569 RVIGQDEAVVAVANAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSLANFMFDSEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E D E IK VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGNLDYEGIKALVMEVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L ++NI +IA+IQL LK +L + + L + +AL I+ GF
Sbjct: 749 FRPEFINRVDETVVFHPLGKENIKNIASIQLERLKKRLAEKDFRLDVGDSALDMIAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|113971326|ref|YP_735119.1| ATPase [Shewanella sp. MR-4]
gi|114048563|ref|YP_739113.1| ATPase [Shewanella sp. MR-7]
gi|117921607|ref|YP_870799.1| ATPase [Shewanella sp. ANA-3]
gi|113886010|gb|ABI40062.1| ATPase AAA-2 domain protein [Shewanella sp. MR-4]
gi|113890005|gb|ABI44056.1| ATPase AAA-2 domain protein [Shewanella sp. MR-7]
gi|117613939|gb|ABK49393.1| ATPase AAA-2 domain protein [Shewanella sp. ANA-3]
Length = 857
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/706 (58%), Positives = 557/706 (78%), Gaps = 21/706 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL ++ E++++E K
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLEHLRVELHEVEAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG + +LE+ L
Sbjct: 455 ASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 LASQAEMQ------DMTLLRNKVTDLEIAEVLSKATGIPVSKMLEGEREKLLQMEVALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLAKFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI----IKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G + +K AVMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFGHLSYSEMKSAVMNVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEF+NRID+ +VF L+ +NI IA+IQ+ L+ +L + + L+I+ AL I+
Sbjct: 746 THSFRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKDYTLEITDEALSLIAE 805
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 709
IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 806 IGFDPVYGARPL---KRAL-----QQEMENPLAQKLLRGDLLPGKP 843
>gi|157376629|ref|YP_001475229.1| ATPase [Shewanella sediminis HAW-EB3]
gi|157319003|gb|ABV38101.1| ATPase AAA-2 domain protein [Shewanella sediminis HAW-EB3]
Length = 857
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/710 (59%), Positives = 552/710 (77%), Gaps = 21/710 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLNELYQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S RY+SDR +PDKAIDLI
Sbjct: 335 KVLVEEPNVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSNRYVSDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +DKLERR IQLK+E +A+ +E DE+S +RL I+KE+ ++ K
Sbjct: 395 DEAASSIRIQIDSKPEPLDKLERRSIQLKLEEQALSKETDEASLRRLYSIRKELRSVDAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L +IW EK + +Q IK ++E+ RL ++ A R SD +S+L+YG + +LE+ L
Sbjct: 455 ASELNEIWHTEKASLAGTQHIKADLEQARLDLDVARRASDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL++E L
Sbjct: 515 LASQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLEGEKEKLLHMEEALHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ E +
Sbjct: 569 RVIGQNEAVDAVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELCKALAKFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EMEKGDKEIIKLAVMNEV 603
+LLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ E+ G+ +K VMN V
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDVIQDRFTELSYGE---MKSEVMNVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEF+NRID+ +VF L+ K+I IA IQ+ L+ +L + +L +S AL I+
Sbjct: 746 VHSFRPEFLNRIDETVVFHPLDEKHIKHIAGIQIESLRQRLAEKEFELILSDEALALIAR 805
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
GFD IYGAR + K++L + ++P A I G L+ P +D
Sbjct: 806 AGFDPIYGARPL---KRAL-----QQEVENPLAQKILSGSLVPGKPIKID 847
>gi|410647346|ref|ZP_11357781.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
agarilytica NO2]
gi|410133201|dbj|GAC06180.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
agarilytica NO2]
Length = 858
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 559/702 (79%), Gaps = 13/702 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KRL LI+ E + E K++ LE
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKRLELIEIEREQAEFKFSELEA 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q I+ E+++ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSELQYGRIPELESKLEIATESE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + LLK++V EIA+++SR TGIPVSK+++ E++KL+N+E+ L +RVVGQ
Sbjct: 521 SQ----PLEHQLLKSRVTESEIADVLSRWTGIPVSKMLEGEKDKLMNMESALHERVVGQS 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLANFLFDTEDAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D E +K +V++ + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDYEKMKQSVLDVLSTHFRPEFL 756
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L I SIA+ QL +L+ +L + L+++ AAL+K++ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLAQITSIASKQLQLLRKRLEDKGIGLELTDAALEKLAEAGFDPVYGA 816
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
R + K+++ + + ++P A I G L+ S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLMTDSVVSIDA 850
>gi|149907606|ref|ZP_01896353.1| clpB protein [Moritella sp. PE36]
gi|149809276|gb|EDM69205.1| clpB protein [Moritella sp. PE36]
Length = 857
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/702 (59%), Positives = 552/702 (78%), Gaps = 21/702 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQREALAKYTLDLTERAEVGKLDPVIGRDDEIRRVIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK ++KE++ + I
Sbjct: 215 IAEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKSVIKELAQTEGQTI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCMGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP++E+TI+ILRGL+ +YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPNVEDTIAILRGLKSRYELHHNVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +DKLERR+IQLKIE +A+++E D +S KRL I +E+ + + K
Sbjct: 395 DEAASSIRLQMDSKPEALDKLERRIIQLKIERQALEKEDDSASIKRLSTIAEELAEKQDK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L++IW+ EK + ++ IK ++K R++++ A R SD +S+L+YG + LE+ L
Sbjct: 455 FNELDEIWRTEKAALSGTKHIKSALDKARVELDMARRASDLNKMSELQYGTIPMLEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q TLLK KVG EIA+I+SR TGIPV ++++ E+EKLL +E+ L +
Sbjct: 515 LAAQAEMQ------DMTLLKHKVGEAEIADILSRWTGIPVHRMLEGEKEKLLAMEDNLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EAIS VSNAIRRSR+GL+D RP GSF+F+GPTGVGKTE+CK L+ IF+++++
Sbjct: 569 RVIGQAEAISVVSNAIRRSRAGLADPNRPMGSFLFMGPTGVGKTEVCKALADFIFDSDQA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ D+FN
Sbjct: 629 MIRLDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDIFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK-EMEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT+NFRNT+I+MTSNLGSD I+ E K D +KL ++ +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVNFRNTVIIMTSNLGSDIIQEEYGKHDYNTVKLRLLELLGQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRIDD +VF L R +I IA IQL L+ +L ++ L I+ AL K+++ GF
Sbjct: 749 FRPEFINRIDDTVVFHPLGRSHIEKIAVIQLKSLEARLKQLGYSLSITAGALAKLADAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPE---ANFIFLGDLI 705
D ++GAR LK++ +K E AN I GD++
Sbjct: 809 DPLFGARP-----------LKRVLQKQVENRLANAILAGDVV 839
>gi|407070078|ref|ZP_11100916.1| chaperone ClpB protein [Vibrio cyclitrophicus ZF14]
Length = 857
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/661 (61%), Positives = 538/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDE+
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGSLIAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK++V+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL ++ E++ E +A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTLQSELSDKERDFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQA 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F+++++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFNTLDYQGIKNEVMEVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L + +I SIA+IQL LK ++ + +L++S ALK IS +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQDHIQSIASIQLEHLKKRMEENGYELEVSDKALKLISQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|330446996|ref|ZP_08310647.1| ATP-dependent chaperone ClpB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491187|dbj|GAA05144.1| ATP-dependent chaperone ClpB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 858
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/667 (62%), Positives = 542/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L E+S +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERLKAVLNELSQEDGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E D++S KRL + +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKEDDDASHKRLSDLLEELDLKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK E+E+ R + A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + TLLK KV EIA+++S+ TGIPVSK+++ ER+KLL +E+ L
Sbjct: 515 LAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVSKMLEGERDKLLRMEDELHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L+ +F++EE+
Sbjct: 569 RVIGQDEAVEAVANAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSLANFMFDSEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E D + IK VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGNLDYDGIKALVMEVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L ++NI +IA+IQ+ LK +L + + L I +AL I+ GF
Sbjct: 749 FRPEFINRVDETVVFHPLGKENIKNIASIQIERLKKRLAEKDYRLDIDDSALDLIAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|410641943|ref|ZP_11352461.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
chathamensis S18K6]
gi|410138260|dbj|GAC10648.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
chathamensis S18K6]
Length = 858
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 559/702 (79%), Gaps = 13/702 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KRL LI+ E + E K++ LE
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKRLELIEIEREQAEFKFSELEA 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q I+ E+++ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSELQYGRIPELESKLEIATESE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + LLK++V EIA+++SR TGIPVSK+++ E++KL+N+E+ L +RVVGQ
Sbjct: 521 SQ----PIEHQLLKSRVTESEIADVLSRWTGIPVSKMLEGEKDKLMNMESALHERVVGQS 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLANFLFDTEDAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D E +K +V++ + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDYEKMKQSVLDVLSTHFRPEFL 756
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L I SIA+ QL +L+ +L + L+++ AAL+K++ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLAQITSIASKQLQLLRRRLEDKGIGLELTDAALEKLAEAGFDPVYGA 816
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
R + K+++ + + ++P A I G L+ S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLMTDSVVSIDA 850
>gi|383311735|ref|YP_005364545.1| chaperone protein ClpB [Pasteurella multocida subsp. multocida str.
HN06]
gi|386835582|ref|YP_006240901.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. 3480]
gi|380873007|gb|AFF25374.1| chaperone protein ClpB [Pasteurella multocida subsp. multocida str.
HN06]
gi|385202287|gb|AFI47142.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. 3480]
Length = 855
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 533/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 154 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 213
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 214 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 273
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 274 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 333
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 334 KVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI 393
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 394 DEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAMLEKELGEKERE 453
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG + LE+ L
Sbjct: 454 YAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYGVIPALEKQLA 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E L K
Sbjct: 514 QAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEELHK 567
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +
Sbjct: 568 RVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENA 627
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 628 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 687
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K VM+ V +F
Sbjct: 688 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYPSMKELVMSVVGQHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI IA IQL L ++ L + A L I +G+D
Sbjct: 748 RPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDFIGEVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|332307414|ref|YP_004435265.1| ATP-dependent chaperone ClpB [Glaciecola sp. 4H-3-7+YE-5]
gi|332174743|gb|AEE23997.1| ATP-dependent chaperone ClpB [Glaciecola sp. 4H-3-7+YE-5]
Length = 858
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 559/702 (79%), Gaps = 13/702 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KRL LI+ E + E K++ LE
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKRLELIEIEREQAEFKFSELEA 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q I+ E+++ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSELQYGRIPELESKLEIATESE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + LLK++V EIA+++SR TGIPVSK+++ E++KL+N+E+ L +RVVGQ
Sbjct: 521 SQ----PIEHQLLKSRVTESEIADVLSRWTGIPVSKMLEGEKDKLMNMESALHERVVGQS 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLANFLFDTEDAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D E +K +V++ + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDYEKMKQSVLDVLSTHFRPEFL 756
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L I SIA+ QL +L+ +L + L+++ AAL+K++ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLAQITSIASKQLQLLRKRLEDKGIGLELTDAALEKLAEAGFDPVYGA 816
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
R + K+++ + + ++P A I G L+ S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLMTDSVVSIDA 850
>gi|15603569|ref|NP_246643.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. Pm70]
gi|425064424|ref|ZP_18467549.1| ClpB protein [Pasteurella multocida subsp. gallicida X73]
gi|54035898|sp|Q9CKC0.1|CLPB_PASMU RecName: Full=Chaperone protein ClpB
gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. multocida str. Pm70]
gi|404381174|gb|EJZ77657.1| ClpB protein [Pasteurella multocida subsp. gallicida X73]
Length = 855
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 533/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 154 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 213
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 214 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 273
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 274 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 333
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 334 KVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI 393
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 394 DEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAMLEKELGEKERE 453
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG + LE+ L
Sbjct: 454 YAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYGVIPALEKQLA 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E L K
Sbjct: 514 QAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEELHK 567
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +
Sbjct: 568 RVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENA 627
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 628 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 687
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K VM+ V +F
Sbjct: 688 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYPSMKELVMSVVGQHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI IA IQL L ++ L + A L I +G+D
Sbjct: 748 RPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDFIGEVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|359453754|ref|ZP_09243059.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20495]
gi|358049188|dbj|GAA79308.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20495]
Length = 858
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/667 (62%), Positives = 540/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +++ I L+ +
Sbjct: 395 DEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRAEMQELITDLDGQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLLK +VG +EIAEI+SR TGIPVS+++Q EREKLL +E L
Sbjct: 515 LASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREKLLQMEEKLHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++
Sbjct: 569 KVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGFMFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K VM+ +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLKAKVMDVLINE 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+I+ AL++I+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEITDTALERIAASGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|378775645|ref|YP_005177888.1| chaperone protein ClpB [Pasteurella multocida 36950]
gi|356598193|gb|AET16919.1| chaperone protein ClpB [Pasteurella multocida 36950]
Length = 855
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 533/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 154 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 213
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 214 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 273
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 274 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 333
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 334 KVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI 393
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 394 DEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAMLEKELGEKERE 453
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG + LE+ L
Sbjct: 454 YAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYGVIPALEKQLA 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E L K
Sbjct: 514 QAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEELHK 567
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +
Sbjct: 568 RVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENA 627
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 628 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 687
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K VM+ V +F
Sbjct: 688 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYSSMKELVMSVVGQHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI IA IQL L ++ L + A L I +G+D
Sbjct: 748 RPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDFIGEVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|24375079|ref|NP_719122.1| stress-induced multi-chaperone system component ClpB [Shewanella
oneidensis MR-1]
gi|54035853|sp|Q8EBE6.1|CLPB_SHEON RecName: Full=Chaperone protein ClpB
gi|24349835|gb|AAN56566.1| stress-induced multi-chaperone system component ClpB [Shewanella
oneidensis MR-1]
Length = 857
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/706 (58%), Positives = 557/706 (78%), Gaps = 21/706 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL +++E+ +E K
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLDHLQEELRDVEAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L +IW+ EK + +Q IK ++E+ RL + A R D +S+L+YG + +LE+ L
Sbjct: 455 ASELSEIWRTEKAALAGTQHIKADLEQARLDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 LASQAEMQ------DMTLLRNKVTDLEIAEVLSKATGIPVSKMLEGEREKLLQMEVALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F++E +
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLARFLFDSESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI----IKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G + +K AVMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFGHLSYSEMKSAVMNVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEF+NRID+ +VF L+ +NI IA+IQ+ L+ +L + + L+I+ AL I+
Sbjct: 746 THSFRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKDYTLEITDEALSLIAE 805
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 709
IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 806 IGFDPVYGARPL---KRAL-----QQEMENPLAQKLLRGDLLPGKP 843
>gi|417854553|ref|ZP_12499843.1| ClpB [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|338217755|gb|EGP03595.1| ClpB [Pasteurella multocida subsp. multocida str. Anand1_goat]
Length = 855
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 533/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 154 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 213
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 214 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 273
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 274 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 333
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 334 KVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI 393
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 394 DEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAMLEKELGEKERE 453
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG + LE+ L
Sbjct: 454 YAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYGVIPALEKQLA 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E L K
Sbjct: 514 QAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEELHK 567
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +
Sbjct: 568 RVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENA 627
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 628 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 687
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K VM+ V +F
Sbjct: 688 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYPNMKELVMSVVGQHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI IA IQL L ++ L + A L I +G+D
Sbjct: 748 RPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDFIGEVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|261250366|ref|ZP_05942942.1| ClpB protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954665|ref|ZP_12597697.1| hypothetical protein VIOR3934_12715 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260939482|gb|EEX95468.1| ClpB protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342814941|gb|EGU49872.1| hypothetical protein VIOR3934_12715 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 857
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/701 (58%), Positives = 552/701 (78%), Gaps = 17/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + ++I+FIDE+
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK++V+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ E+N E +A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLTILNDELNDKERAFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQT 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGMKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L ++ + L +S+ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLLRLSKRMEEKGYSLDVSEKALDLIAQVGFDPVYGA 814
Query: 673 RDV-HGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 712
R + ++S+ ++P A I G +I P L
Sbjct: 815 RPLKRAIQQSV---------ENPLAKAILAGKVIPDKPVKL 846
>gi|119775735|ref|YP_928475.1| clpB protein [Shewanella amazonensis SB2B]
gi|119768235|gb|ABM00806.1| clpB protein [Shewanella amazonensis SB2B]
Length = 857
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/701 (58%), Positives = 553/701 (78%), Gaps = 15/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELAQEEGQVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRYVSDRKLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+LERR IQLK+E +A+ +E DE+S+KRL ++ E+ ++E K L +
Sbjct: 401 IRMQIDSKPESLDRLERRAIQLKLEEQALAKENDEASRKRLEHLRHELKEVEAKANELNE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK + +Q IK ++E+ R+ + A R SD +S+L+YG + +LE+ L +Q +
Sbjct: 461 IWRTEKAALAGTQHIKADLEQARMDLEVARRASDLTRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q LL+ KV EIAE++S+ TGIPV+K+++ EREKLL +E+ L +RV+GQ+
Sbjct: 521 MQ------DMKLLRNKVTDVEIAEVLSKATGIPVAKMLEGEREKLLQMEHALHERVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E +++RIDM
Sbjct: 575 EAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLAKFLFDTESALVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VMN V FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQERFGTLDYAQMKQEVMNVVVHSFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L+ ++I +IA+IQ+ L+ +L + +L++S AL I+ GFD +YGA
Sbjct: 755 NRIDETVVFHPLDAEHIKNIASIQIESLRKRLAEREFELELSDEALAFIARAGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
R + K++L + ++P A + G+ I P +D
Sbjct: 815 RPL---KRAL-----QQEVENPLAQKLLRGEFIPGKPIRVD 847
>gi|410614264|ref|ZP_11325313.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
gi|410166186|dbj|GAC39202.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
Length = 856
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/661 (62%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L K+T DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LDKFTTDLTARAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLNELSKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE MDKLERR+IQLK+E +A+ +E DE+S KRL LI+ E + E K++ E
Sbjct: 401 IRLQMDSKPEDMDKLERRIIQLKLEEQALSKEKDEASHKRLELIELEREQAEHKFSAFET 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK ++ +Q I+ E+E+ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWIAEKQAMQGTQTIRSELEQAKLDLEIARRASDLSRMSELQYGRIPELEAKLEVATESE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + TLLK KV EIA+++SR TGIPVSK+++ E+ KLL +E L KRVVGQ
Sbjct: 521 TQ------ETTLLKNKVTESEIADVLSRWTGIPVSKMLEGEKVKLLAMEEALHKRVVGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+ E +++RIDM
Sbjct: 575 EAVTAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDTENAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++R++GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARMVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E+ + + + +K VMN V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEVSGESNYQQMKGLVMNAVGEHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DDI+VF L ++ I +IA IQL L+ +L + L++S AL KI++ GFD +YGA
Sbjct: 755 NRVDDIVVFHPLGKEQIKAIAKIQLCSLRERLAEKGYKLELSLEALDKIADAGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|94498969|ref|ZP_01305507.1| ATPase with chaperone activity, ATP-binding subunit [Bermanella
marisrubri]
gi|94428601|gb|EAT13573.1| ATPase with chaperone activity, ATP-binding subunit [Oceanobacter
sp. RED65]
Length = 870
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/671 (61%), Positives = 547/671 (81%), Gaps = 17/671 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L K+T+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTAI+EGLA
Sbjct: 159 LDKFTVDLTARAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTAIIEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI++GEVP L +K+IL LD+ LLAG K+RG+FE+RLK +LKE+S + +I++FIDE+
Sbjct: 219 QRIVDGEVPEGLRNKRILSLDMGSLLAGAKFRGDFEERLKNVLKEVSKQEGNIVLFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP LSRGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 279 HTMVGAGKTDGALDAGNMLKPALSRGELHCVGATTLDEYREYIEKDAALERRFQKVLVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLIDEAA+
Sbjct: 339 PSEEDTVAILRGLKERYEVHHGVQITDGAIIAAAKLSTRYITDRQLPDKAIDLIDEAASI 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKP+ MD+LERRLIQLKIE EA+ +E DE SKKRL I EINKL +Y LE
Sbjct: 399 IRMEIDSKPQEMDRLERRLIQLKIEREALNKESDEGSKKRLNEINGEINKLGREYVELED 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK--EKSQ 371
+WK EK ++ S+Q KE +E+ ++++ +A R D Q +S+L+YG++ +LE+ ++ EK++
Sbjct: 459 VWKQEKLSLEGSKQAKEALEEAKVEMEQARRAGDLQRMSELQYGKIPELEKQIEAAEKAE 518
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
K +N+F LL+ +V EEIAE+VS+ TG+PV+K+++ EREKLL +E L K VVG
Sbjct: 519 K------GSNEFKLLRNRVTDEEIAEVVSKWTGVPVAKMLEGEREKLLRMEQELHKHVVG 572
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
QD+AI+AVSNA+RRSR+GLSD ++P GSF+FLGPTGVGKTELCK L+ +F+++++++RI
Sbjct: 573 QDDAITAVSNAVRRSRAGLSDPRKPNGSFLFLGPTGVGKTELCKALATFMFDSQDAMVRI 632
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ
Sbjct: 633 DMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEHVRRKPYSVILLDEVEKAHPDVFNILLQ 692
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-------EKGDKEI--IKLAVMNE 602
+LDDG+LTD +GRT++F+NT++VMTSNLGSD I+ M E+ D E +K AVM
Sbjct: 693 VLDDGQLTDGQGRTVDFKNTVLVMTSNLGSDVIQTMSHHNQGEEQTDTEYEEMKSAVMEI 752
Query: 603 VKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKIS 662
V +FRPEFINRID+++VF L + I IA IQL L+ +L + + L++S A+ ++
Sbjct: 753 VGGHFRPEFINRIDEVVVFHPLQKSQIQGIAQIQLQELEKRLKERELSLQLSDEAINRLV 812
Query: 663 NIGFDLIYGAR 673
+G+D +YGAR
Sbjct: 813 EVGYDPVYGAR 823
>gi|418464566|ref|ZP_13035505.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756521|gb|EHK90678.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 856
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/666 (60%), Positives = 538/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNSEVPEGLKNKRVLSLDMGTLIAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY QYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYHQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YAELEEVWKAEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E L K
Sbjct: 515 QAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEFLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F++E++
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM V YF
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHAQEGDDAVKSMVMEVVGRYF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ ++F LN++NI IA+IQL L ++ L + A L IS+IG+D
Sbjct: 749 RPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMEIHGYVLNFTDATLDFISDIGYD 808
Query: 668 LIYGAR 673
I+GAR
Sbjct: 809 PIFGAR 814
>gi|269140172|ref|YP_003296873.1| protein disaggregation chaperone [Edwardsiella tarda EIB202]
gi|267985833|gb|ACY85662.1| protein disaggregation chaperone [Edwardsiella tarda EIB202]
Length = 857
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/668 (61%), Positives = 539/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERLKAVLNDLAKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++ E+ + E
Sbjct: 395 DEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKKRLEILNTELEEKERD 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG+L LE+ L+
Sbjct: 455 YASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMSEIQYGKLPDLEKQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E+ L +
Sbjct: 515 AATQAE------GKSMKLLRNKVTDVEIAEVLARWTGIPVSRMLEGEREKLLRMEDELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ GD +K VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQD-RFGDLSYGEMKELVMSVVTH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+ +VF L ++NI +IA IQL L +L + + +S AAL+++S G
Sbjct: 748 HFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKGYSISMSDAALEQLSQAG 807
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 808 FDPVYGAR 815
>gi|127513876|ref|YP_001095073.1| ATPase [Shewanella loihica PV-4]
gi|126639171|gb|ABO24814.1| ATPase AAA-2 domain protein [Shewanella loihica PV-4]
Length = 857
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/708 (58%), Positives = 552/708 (77%), Gaps = 15/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIINGEVPEGIKNKRVLSLDLGALVAGAKYRGEFEERLKAVLNELAQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR IQLK+E +A+ +E DE+S +RL ++ E+ ++E K
Sbjct: 395 DEAASSIRMQIDSKPEPLDRLERRTIQLKLEEQALSKESDEASLRRLSTLRSELAEVEAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A L ++W EK + +Q IK ++E+ R+ + A R D +S+L+YG + +LE+ L
Sbjct: 455 AAELNEVWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL++E L
Sbjct: 515 LAAQAEMQ------DMTLLRNKVSDVEIAEVLSKATGIPVSKMLEGEKEKLLHMEEALHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLAKFLFDTEAA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K VMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDVIQERFGIASYAEMKSEVMNVVTHS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+ +VF L ++I IA IQ++ LK +L + + +L++S AL I+ GF
Sbjct: 749 FRPEFLNRIDESVVFHPLESEHIAHIAQIQIDNLKARLAEKDFELEVSDDALALIAQAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
D +YGAR + K++L + ++P A + G+L+ P +D
Sbjct: 809 DPVYGARPL---KRAL-----QQEVENPLAQKLLSGELLPGAPIKVDA 848
>gi|410620447|ref|ZP_11331318.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
polaris LMG 21857]
gi|410159932|dbj|GAC35456.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
polaris LMG 21857]
Length = 858
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 560/702 (79%), Gaps = 13/702 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE MD+LERR+IQLK+E +A+ +E D++S KRL LI+ E + E K++ LE
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDDASHKRLELIEIEREQAEFKFSELET 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q I+ E+E+ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKAEKQAMQGTQNIRAELEQAKLDLEIARRASDLSRMSELQYGRIPELESKLEIATESE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + + LLK++V EIA+++SR TGIPVSK+++ E++KL+++E+ L +RVVGQ
Sbjct: 521 SQ----SVEHQLLKSRVTENEIADVLSRWTGIPVSKMLEGEKDKLMSMESALHERVVGQS 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLAHFLFDTEDAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D E +K +V++ + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDYEKMKQSVLDVLSTHFRPEFL 756
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L + I SIA+ QL L+ +L + + L+++ AAL+K++ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLEQITSIASKQLQFLRKRLEEKGIGLELTDAALQKLAEAGFDPVYGA 816
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
R + K+++ + + ++P A I G LI S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLIADSVVSIDA 850
>gi|343517922|ref|ZP_08754918.1| ATP-dependent chaperone protein ClpB [Haemophilus pittmaniae HK 85]
gi|343394773|gb|EGV07320.1| ATP-dependent chaperone protein ClpB [Haemophilus pittmaniae HK 85]
Length = 856
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/666 (60%), Positives = 537/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE++ E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELSDKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+ ++ + ++ +A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWKSEKAALSGSQHIKQALDAAKTEMEQARRAGDLSKMSELQYGRIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ +LL+ +V EEIAE++S+ TGIPV K+++ E+EKLL +E L K
Sbjct: 515 AAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVFKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESYGEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L + NI +IA+IQL L ++ +L ++A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELVFTEALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>gi|422016627|ref|ZP_16363208.1| protein disaggregation chaperone [Providencia burhodogranariea DSM
19968]
gi|414092612|gb|EKT54287.1| protein disaggregation chaperone [Providencia burhodogranariea DSM
19968]
Length = 857
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/703 (59%), Positives = 555/703 (78%), Gaps = 17/703 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+ V E
Sbjct: 281 HTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVYVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA A
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLIDEAGAS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL +++ E+ + E +Y++LE+
Sbjct: 401 LRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLEGELAEKEREYSSLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E R +I KA R D +S+L+YG + +LE+ L+ ++ +
Sbjct: 461 EWKAEKASLTGTQHIKAELENARYEIEKARRSGDLAKMSELQYGRIPELEKQLEAATKAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAEI++R TGIPVS++++ EREKLL +E L +RV+GQD
Sbjct: 521 ------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREKLLRMEQQLHRRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEIIKLAVMNEVKIYFRPEF 611
DDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G E +K VM V FRPEF
Sbjct: 695 DDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGVIGYSE-MKDMVMEVVAHSFRPEF 753
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L +++I++IANIQL L +L + ++ + AAL+KI GFD I+G
Sbjct: 754 INRIDEVVVFHPLGKEHIMNIANIQLARLYKRLEEHGYEVSATPAALEKIGEAGFDPIFG 813
Query: 672 ARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
AR + K+++ + ++P A I G LI P +LD
Sbjct: 814 ARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPVTLDV 848
>gi|387868692|ref|YP_005700161.1| chaperone ClpB [Edwardsiella tarda FL6-60]
gi|304560005|gb|ADM42669.1| ClpB [Edwardsiella tarda FL6-60]
Length = 809
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/670 (60%), Positives = 540/670 (80%), Gaps = 13/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 107 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 166
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ + +I
Sbjct: 167 IVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERLKAVLNDLAKQEGSVI 226
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 227 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 286
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 287 KVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 346
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++ E+ + E
Sbjct: 347 DEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKKRLEILNTELEEKERD 406
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG+L LE+ L+
Sbjct: 407 YASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMSEIQYGKLPDLEKQLQ 466
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E+ L +
Sbjct: 467 AATQAE------GKSMKLLRNKVTDVEIAEVLARWTGIPVSRMLEGEREKLLRMEDELHR 520
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 521 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 580
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 581 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 640
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EMEKGDKEIIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ G+ +K VM+ V
Sbjct: 641 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGDLSYGE---MKELVMSVV 697
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+FRPEFINRID+ +VF L ++NI +IA IQL L +L + + +S AAL+++S
Sbjct: 698 THHFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKGYSISMSDAALEQLSQ 757
Query: 664 IGFDLIYGAR 673
GFD +YGAR
Sbjct: 758 AGFDPVYGAR 767
>gi|392545971|ref|ZP_10293108.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas rubra ATCC
29570]
Length = 857
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/661 (62%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E+ + +I+FIDE+
Sbjct: 221 QRIINGEVPEGLKDKRVLSLDLGALVAGAKYRGEFEERLKSVLNELGKEEGRVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYISDR +PDKAIDLIDEA +
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVDITDPAIVAAAQLSHRYISDRQLPDKAIDLIDEAGSS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR ++ I +LE +Y L++
Sbjct: 401 IRLQIDSKPEQLDKLERRIIQLKLEDNALAKEKDEASQKRRSEMQTLIQQLETEYRELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L SQ +
Sbjct: 461 VWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYGRIPELERKLDLASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + +LLK +VG +EIAEI+SR TGIPV+K++Q ER+KLL +E+ L K+V+GQD
Sbjct: 521 MQ------EMSLLKNQVGEDEIAEILSRWTGIPVAKMLQGERDKLLQMEDELHKKVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++++RIDM
Sbjct: 575 EAVSAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGFMFDTEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E D +K VM+ + FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDVIQEQAGSNDYATLKKRVMDVLVTQFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L ++I IA+IQL L+ +L +++ AAL KI+ GFD +YGA
Sbjct: 755 NRIDETVVFHPLINEHIKQIADIQLAKLRQRLHDKGFGFELTDAALDKIAASGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|372267908|ref|ZP_09503956.1| ATP-dependent chaperone ClpB [Alteromonas sp. S89]
Length = 868
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/677 (62%), Positives = 550/677 (81%), Gaps = 16/677 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L K+T+D+T +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEARQALDKFTLDMTARAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKDKRLLSLDLGALLAGAKFRGEFEERLKAVLNELSKQEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAATKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREY-DESSKKRLLLIKKEINKLEI 306
DEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K++ DE++KKRL ++++I+++E
Sbjct: 395 DEAASRIRMEIDSKPEEMDKLERRLIQLKIEREAVKKDKDDEAAKKRLEKLEEDIDQIEK 454
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+YA+LE+IWK EK + S IK ++E+ +L ++ A R D +S+++YG + +LE L
Sbjct: 455 EYADLEEIWKAEKAKLAGSADIKNKLEQAKLDMDAARRAGDLTRMSEIQYGVIPQLEEQL 514
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
K S ++ ++ LL+ +V EE+AE+VSR TGIPVSK+++ EREKLL +E++L
Sbjct: 515 KHASDS-----SDTSENQLLRNRVTDEEVAEVVSRWTGIPVSKMLEGEREKLLRMEDVLH 569
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ E+
Sbjct: 570 NRVIGQDEAVEAVSNAVRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALAQFLFDTED 629
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVF
Sbjct: 630 AMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVF 689
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG------DKEI----IK 596
NILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I++ G D EI +K
Sbjct: 690 NILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKYASGRDDDEIDSEIQYRQMK 749
Query: 597 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 656
AVM+ V +FRPEFINRID+++VF L R+ + +IA IQL L+ +LL ++ L+IS
Sbjct: 750 AAVMDVVGEHFRPEFINRIDEVVVFHPLGREEVRAIAEIQLQNLRKRLLDRDLKLEISDE 809
Query: 657 ALKKISNIGFDLIYGAR 673
L K++++GFD +YGAR
Sbjct: 810 LLGKLADVGFDPVYGAR 826
>gi|254375107|ref|ZP_04990587.1| hypothetical protein FTDG_01296 [Francisella novicida GA99-3548]
gi|151572825|gb|EDN38479.1| hypothetical protein FTDG_01296 [Francisella novicida GA99-3548]
Length = 859
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/666 (60%), Positives = 546/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNNEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++++EI L+ +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++DVFN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKSAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|212558156|gb|ACJ30610.1| AAA ATPase, central region:Clp, N terminal [Shewanella
piezotolerans WP3]
Length = 857
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/667 (61%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINNEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELSQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPNVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSNRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +DKLERR IQLK+E +A+ +E DE+S +RL +++ E+ ++E K
Sbjct: 395 DEAASSIRIQIDSKPESLDKLERRAIQLKLEEQAVSKEEDEASLRRLDVLRSELKEVEGK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
L +IW EK + +Q IK ++E+ R+ + A R D +S+L+YG + +LE+ L
Sbjct: 455 AGELNEIWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREKLL +E+ L +
Sbjct: 515 LAAQAEMQ------DMTLLRNKVTDIEIAEVLSKATGIPVSKMLEGEREKLLQMEDALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ +VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 RVIGQNEAVDSVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLAKFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + + +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDAIQAGFGSQNYDEMKSNVMQVVTQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D+ +VF LN++NI IA+IQ++ LK +L + +L IS AL I+ G+
Sbjct: 749 FRPEFLNRVDESVVFHPLNKENIAHIASIQIDGLKQRLADKDYELSISDDALAIIAEAGY 808
Query: 667 DLIYGAR 673
D IYGAR
Sbjct: 809 DPIYGAR 815
>gi|409397138|ref|ZP_11248076.1| ClpB protein [Pseudomonas sp. Chol1]
gi|409118298|gb|EKM94698.1| ClpB protein [Pseudomonas sp. Chol1]
Length = 854
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/666 (61%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEDDIAKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S Q++++IE+ + + A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQLQQKIEQAKADLEAARRKGDLARMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E++L +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEDMLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSMQIQEL-VGDPDAQRAAVMDAVGHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA+IQL L+ +L + + L++++ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLAREQIAGIADIQLARLRKRLAERELSLELTQEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|218708596|ref|YP_002416217.1| chaperone ClpB protein [Vibrio splendidus LGP32]
gi|218321615|emb|CAV17567.1| Chaperone clpB protein [Vibrio splendidus LGP32]
Length = 857
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/661 (61%), Positives = 539/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IG+PGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + ++I+FIDE+
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLNELSKEEGNVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK++V+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL ++ E+++ E +A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTLQSELSEKERDFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQG 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFNTLDYQGIKNEVMEVVGKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA IQL LK ++ +L++S+ ALK IS +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIESIAAIQLEHLKMRMEDNGYELEVSEKALKLISQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|91794212|ref|YP_563863.1| ATPase AAA-2 [Shewanella denitrificans OS217]
gi|91716214|gb|ABE56140.1| ATPase AAA-2 [Shewanella denitrificans OS217]
Length = 862
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/667 (61%), Positives = 538/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRRSKNNPVLIG+PGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRSKNNPVLIGDPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RYISDR +PDKAIDLI
Sbjct: 335 KVLVNEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE++D+LERR IQLK+E +A+ +E D++S+KRL ++ E+ + K
Sbjct: 395 DEAASSIRMQIDSKPEVLDRLERRAIQLKLEEQALSKETDDASRKRLEHLQLELKDVSAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L +IW EK + +Q IK ++E+ R+ ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 ASELNEIWHTEKAALAGTQHIKADLEQARMDLDVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREKLL +E+ L +
Sbjct: 515 LASQAEMQ------DMTLLRNKVTDIEIAEVLSKATGIPVSKMLEGEREKLLQMESALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 RVIGQSEAVEAVSNAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSLAKFLFDTEAA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTESVRRKPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + +K AVMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEGFGTLSYQEMKAAVMNVVTHS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D+ +VF L++++I IA IQ+ L+ +L + + +L ++ AAL I+ GF
Sbjct: 749 FRPEFLNRVDESVVFHPLDKEDIKHIAGIQIGSLRKRLQEKDYELLVTDAALSLIAAAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|208780138|ref|ZP_03247481.1| ATPase family associated with various cellular activities (AAA)
protein [Francisella novicida FTG]
gi|208744142|gb|EDZ90443.1| ATPase family associated with various cellular activities (AAA)
protein [Francisella novicida FTG]
Length = 859
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/666 (60%), Positives = 546/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++++EI L+ +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++DVFN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKSAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTDAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|392541242|ref|ZP_10288379.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas piscicida
JCM 20779]
Length = 857
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L SK++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDE+
Sbjct: 221 QRIINGEVPEGLKSKRVLSLDVGALVAGVKYRGEFEERLKSVLNELAKEEGQVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
TM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 RTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA +
Sbjct: 341 PTVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSHRYISDRQLPDKAIDLIDEAGSS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+LERR+IQLK+E A+ +E DE+S+KR ++ IN+LE +Y L++
Sbjct: 401 IRLQIDSKPEQLDRLERRIIQLKLEDNALAKEKDEASQKRRTEMQTLINELEAEYRELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L SQ +
Sbjct: 461 VWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYGRIPELERKLDLASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + +LLK +VG +EIAEI+SR TGIPV+K++Q EREKLL +E+ L K+V+GQD
Sbjct: 521 MQ------EMSLLKNQVGEDEIAEILSRWTGIPVAKMLQGEREKLLQMEDELHKKVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E +++RIDM
Sbjct: 575 EAVNAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALANFMFDTEGAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E D +K VM + FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDVIQEQAGNNDYATLKERVMGVLASQFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L ++I IA+IQL+ L +L + L++S AAL KI+ GFD +YGA
Sbjct: 755 NRIDETVVFHPLINEHIKEIASIQLDRLSKRLTEKGFALELSDAALDKIAASGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|387825396|ref|YP_005824867.1| ClpB protein [Francisella cf. novicida 3523]
gi|332184862|gb|AEE27116.1| ClpB protein [Francisella cf. novicida 3523]
Length = 859
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/666 (60%), Positives = 544/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNNEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KKRL +++ EI LE +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKKRLEILETEIKGLESE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y E++WK EK ++ + ++KE++EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YQGFEELWKAEKLKMQGASKLKEQLEKTKFELEKYQRAGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE +RRKPYS+ILLDE+EKA++DVFN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHIRRKPYSVILLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D +I+K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYDIVKDAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +N+ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLRDLNIGLEVTAKAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|333901990|ref|YP_004475863.1| ATP-dependent chaperone ClpB [Pseudomonas fulva 12-X]
gi|333117255|gb|AEF23769.1| ATP-dependent chaperone ClpB [Pseudomonas fulva 12-X]
Length = 854
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/666 (61%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IAEGLAQRIVNGEVPDGLKDKRLLSLDMGALIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPSLARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKR + ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVEAQALKKEEDEAAKKRFVKLQDDIAKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE IWK EK ++ S QI++ IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEDIWKSEKAEVQGSAQIQQRIEQAKTELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E LL +
Sbjct: 515 MVDQ------HGTTENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMEGLLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ E++
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGNHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID+++VF L R+ I IA IQL+ L +L + + L++S A+ K+ +G+D
Sbjct: 748 RPEFVNRIDEVVVFEPLAREQIAGIARIQLSRLLQRLAERELSLELSDEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|254371967|ref|ZP_04987460.1| ClpB protein [Francisella tularensis subsp. novicida GA99-3549]
gi|151569698|gb|EDN35352.1| ClpB protein [Francisella novicida GA99-3549]
Length = 859
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/666 (60%), Positives = 546/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++++EI L+ +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++DVFN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKSAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTDAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|260771761|ref|ZP_05880679.1| ClpB protein [Vibrio metschnikovii CIP 69.14]
gi|260613053|gb|EEX38254.1| ClpB protein [Vibrio metschnikovii CIP 69.14]
Length = 838
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 551/702 (78%), Gaps = 15/702 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A KLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 142 LEKFTIDLTERAEQSKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 201
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 202 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 261
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 262 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 321
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 322 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 381
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+I++DSKPE++DKLER++IQLKIE +A+ E+D++S+KRL +I E+ + E +Y+ LE+
Sbjct: 382 IRIQMDSKPEVLDKLERKIIQLKIEQQALSNEHDDASEKRLGIINDELKEKEREYSELEE 441
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + +Q IK +E+ RL + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 442 IWNTEKAALSGTQHIKSALEQARLDLEVARRAGDLNRMSELQYGRIPELEKQLDLATQAE 501
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EEIAE++S+ TGIPV+K+++ E+EKLL +E L +RV+GQ
Sbjct: 502 MQ------EMTLLRNKVTDEEIAEVLSKQTGIPVAKMLEAEKEKLLQMETFLHQRVIGQS 555
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V++AIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 556 EAVEVVADAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 615
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 616 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL 675
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K VM V +FRPEF+
Sbjct: 676 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAHLDYQTMKEQVMEVVSKHFRPEFL 735
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L ++ I SIA IQL L+ +L + L +S AL +++IGFD +YGA
Sbjct: 736 NRIDESVVFHPLAQEQIKSIAFIQLERLRQRLADKDYGLIVSDDALDLVAHIGFDPVYGA 795
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
R + K+++ + ++P A I G I P LD
Sbjct: 796 RPL---KRAIQQTI-----ENPLAKSILSGQFIPGTPIYLDV 829
>gi|88800775|ref|ZP_01116332.1| ATPase with chaperone activity, ATP-binding subunit [Reinekea
blandensis MED297]
gi|88776481|gb|EAR07699.1| ATPase with chaperone activity, ATP-binding subunit [Reinekea sp.
MED297]
Length = 858
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/667 (61%), Positives = 527/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYT+DLT +A GKLDPVIGRDDEIRR +QVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALDKYTVDLTARAEAGKLDPVIGRDDEIRRTVQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP +L +K++L LD+ LLAG KYRGEFE+RLK +L E++ + II
Sbjct: 215 IVEGLAQRIINGEVPENLKNKRVLSLDLGALLAGAKYRGEFEERLKAVLNELAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQYIEKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDGALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP+ E++I+ILRGL+++YEVHHGV ITD AI+AA LS RYI+DR +PDKAIDLI
Sbjct: 335 KVQVSEPNEEDSIAILRGLKERYEVHHGVTITDAAIIAAVRLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DE+A++I++EIDSKPE MD+LERRLIQLKIE EA+K+E D +K RL ++ I E +
Sbjct: 395 DESASRIRMEIDSKPESMDRLERRLIQLKIEAEALKKESDPQAKSRLEKLQVSIKDAERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK ++ SQ +KE++E+ R+ + A R D +S+L+YG + +LE+ L
Sbjct: 455 YASLEEIWNTEKAAVQGSQHVKEQLEQARVDLEAARRAGDLARMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++ LL KV E IA ++SR TGIPV K+++ ER+KLL +E +L
Sbjct: 515 MASQAEMM------DMQLLHNKVTDESIANVISRWTGIPVDKMLEGERDKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
R+VGQ EA+ AVSNAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ E+
Sbjct: 569 RLVGQHEAVVAVSNAIRRSRSGLSDPNRPNGSFLFLGPTGVGKTELCKSLAQFLFDTTEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHTDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+ + + + +K AVM+ V Y
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDQIQNLAGEAHYDEMKAAVMDVVGGY 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+++VF L + I IA IQL L +L + + L+I ++ + K+ GF
Sbjct: 749 FRPEFINRLDEVVVFHPLGSEQIRGIARIQLQYLHERLSEQELGLEIRESVMDKLCEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|134301181|ref|YP_001121149.1| AAA ATPase [Francisella tularensis subsp. tularensis WY96-3418]
gi|421750900|ref|ZP_16187962.1| AAA ATPase [Francisella tularensis subsp. tularensis AS_713]
gi|421752757|ref|ZP_16189771.1| AAA ATPase [Francisella tularensis subsp. tularensis 831]
gi|421756486|ref|ZP_16193394.1| AAA ATPase [Francisella tularensis subsp. tularensis 80700103]
gi|421758352|ref|ZP_16195202.1| AAA ATPase [Francisella tularensis subsp. tularensis 70102010]
gi|424673593|ref|ZP_18110529.1| AAA ATPase [Francisella tularensis subsp. tularensis 70001275]
gi|134048958|gb|ABO46029.1| AAA superfamily ATPase clpB [Francisella tularensis subsp.
tularensis WY96-3418]
gi|409089432|gb|EKM89475.1| AAA ATPase [Francisella tularensis subsp. tularensis 831]
gi|409089461|gb|EKM89503.1| AAA ATPase [Francisella tularensis subsp. tularensis AS_713]
gi|409092604|gb|EKM92574.1| AAA ATPase [Francisella tularensis subsp. tularensis 70102010]
gi|409093527|gb|EKM93468.1| AAA ATPase [Francisella tularensis subsp. tularensis 80700103]
gi|417435757|gb|EKT90630.1| AAA ATPase [Francisella tularensis subsp. tularensis 70001275]
Length = 859
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/666 (60%), Positives = 546/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++++EI L+ +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDEIEKA++D+FN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEIEKAHADIFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKSAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|254876196|ref|ZP_05248906.1| chaperone clpB [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842217|gb|EET20631.1| chaperone clpB [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 859
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/666 (60%), Positives = 543/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL +++ EI LE +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEAEIKGLESE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y E++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YQGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++DVFN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D + +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYDTVKDAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRIDD IVF LN++ I IA IQ+ L+ +L +N+ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRIDDAIVFEPLNKEMITEIAKIQIKRLEKRLRDLNIGLEVTAKAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|421494136|ref|ZP_15941488.1| CLPB [Morganella morganii subsp. morganii KT]
gi|455738463|ref|YP_007504729.1| ClpB protein [Morganella morganii subsp. morganii KT]
gi|400191693|gb|EJO24837.1| CLPB [Morganella morganii subsp. morganii KT]
gi|455420026|gb|AGG30356.1| ClpB protein [Morganella morganii subsp. morganii KT]
Length = 857
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/661 (60%), Positives = 540/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+ LLAG KYRG+FE+RLK +L E+S + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKNKRVLSLDLGALLAGAKYRGDFEERLKAVLNELSKEEGSVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEA A
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDRMLPDKAIDLIDEAGAS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+++++DSKPE +D+L+RR+IQLK+E +A+K+E D++SKKRL ++++E+ + E +YA+LE+
Sbjct: 401 LRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASKKRLDMLEQELTEKEREYASLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ + + +A R D +S+L+YG++ +LE+ L + +
Sbjct: 461 EWKAEKATLSGTQHIKAELEQAKTALEQARRTGDLTKMSELQYGKIPELEKQLAAANAAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL+ KV EIAEI++R TGIPVS++++ EREKLL +E ++ RV+GQD
Sbjct: 521 DK------EMKLLRNKVTDVEIAEILARWTGIPVSRMLEGEREKLLRMEQVMHSRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALADFLFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD+I+E + + + +K AVM V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDRIQEHFGELNYDAMKGAVMEVVSHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++ I +IA IQL L +L + + I+ +AL K++ GFD ++GA
Sbjct: 755 NRIDEVVVFHPLAKEQIHAIAKIQLKRLYKRLEEHGYQVTITDSALDKLAEAGFDPVFGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|56708764|ref|YP_170660.1| ClpB protein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110671236|ref|YP_667793.1| ClpB protein [Francisella tularensis subsp. tularensis FSC198]
gi|254371373|ref|ZP_04987374.1| ClpB protein [Francisella tularensis subsp. tularensis FSC033]
gi|254875628|ref|ZP_05248338.1| clpB protein [Francisella tularensis subsp. tularensis MA00-2987]
gi|379717990|ref|YP_005306326.1| ClpB protein [Francisella tularensis subsp. tularensis TIGB03]
gi|379726593|ref|YP_005318779.1| ClpB protein [Francisella tularensis subsp. tularensis TI0902]
gi|385795553|ref|YP_005831959.1| ClpB protein [Francisella tularensis subsp. tularensis NE061598]
gi|421756433|ref|ZP_16193345.1| ClpB protein [Francisella tularensis subsp. tularensis 80700075]
gi|56605256|emb|CAG46402.1| ClpB protein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110321569|emb|CAL09785.1| ClpB protein [Francisella tularensis subsp. tularensis FSC198]
gi|151569612|gb|EDN35266.1| ClpB protein [Francisella tularensis subsp. tularensis FSC033]
gi|254841627|gb|EET20063.1| clpB protein [Francisella tularensis subsp. tularensis MA00-2987]
gi|282160088|gb|ADA79479.1| ClpB protein [Francisella tularensis subsp. tularensis NE061598]
gi|377828042|gb|AFB81290.1| ClpB protein [Francisella tularensis subsp. tularensis TI0902]
gi|377829667|gb|AFB79746.1| ClpB protein [Francisella tularensis subsp. tularensis TIGB03]
gi|409084423|gb|EKM84599.1| ClpB protein [Francisella tularensis subsp. tularensis 80700075]
Length = 859
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/666 (59%), Positives = 546/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++++EI L+ +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++D+FN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADIFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKSAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTGAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|333907083|ref|YP_004480669.1| ATP-dependent chaperone ClpB [Marinomonas posidonica IVIA-Po-181]
gi|333477089|gb|AEF53750.1| ATP-dependent chaperone ClpB [Marinomonas posidonica IVIA-Po-181]
Length = 859
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/667 (61%), Positives = 541/667 (81%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT +A G+LDPVIGRDDEIRR IQVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTARAAEGRLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKKKRVLSLDMGALIAGAKYRGEFEERLKALLNELSKQEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+GTGK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGTGKSEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP + ++I+ILRGL+++YEVHHGV+ITD AI+A+++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSVLDSIAILRGLKERYEVHHGVDITDSAIIASAKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D++SK RL + EI++L+ +
Sbjct: 395 DEAASRIRMEMDSKPEDMDRLERRLIQLKIEKEALKKEKDKASKLRLDELGSEIDRLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L++IW EK + +Q++KEE+E VR ++ +A R + +S+L+YG + LE ++
Sbjct: 455 FSDLDEIWNAEKAAVHGAQKLKEELESVRHEMEEARRNGNLAKMSELQYGVIPMLEAEIE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ Q++ + LLK V EEIA +VSR TGIPV K+++ ER+KLL +E L +
Sbjct: 515 KAGQEE-----ENTETRLLKRHVSEEEIATVVSRWTGIPVDKMLEGERDKLLRMEEALHE 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
V+GQ+EA+SAVSNA+RRSRSGL+D +P GSF+FLGPTGVGKTELCK+L+ +F+ E++
Sbjct: 570 SVMGQNEAVSAVSNAVRRSRSGLADPNKPNGSFLFLGPTGVGKTELCKSLAKFLFDTEQA 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 630 MVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E + D+ + IK VM+ V +
Sbjct: 690 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEYQSDDQYDEIKAKVMSVVGTH 749
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L R I IA IQL L N+L +M M L +S AA ++++ +G+
Sbjct: 750 FRPEFINRIDETVVFHPLMRSQIKGIAAIQLAHLNNRLEEMGMSLIMSDAAQERLAEVGY 809
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 810 DPVYGAR 816
>gi|374334801|ref|YP_005091488.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
gi|372984488|gb|AEY00738.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
Length = 857
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/667 (61%), Positives = 542/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKALLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDQPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE S+KRL LI+ E+ + E +
Sbjct: 395 DEAASSIRLQIDSKPEPLDRLDRRIIQLKLEEQALLKEDDEGSRKRLQLIRDELAEKEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E+VR ++ A R SD +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWKSEKAALAGTQHIKAELEQVRQELEVARRASDLARMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + LLK +V EEIA+++SR TGIPV+K+++ E+EKLL +E+ L +
Sbjct: 515 LAAQAEMQ------EQHLLKNRVTDEEIADVLSRWTGIPVAKMLEGEKEKLLRMEDSLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+F+GPTGVGKTELCK L+ +F++ ++
Sbjct: 569 QVIGQNEAVDAVANAIRRSRAGLSDPNRPVGSFLFMGPTGVGKTELCKALADFLFDSRDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSN+GSD I+E D + +K +M +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNIGSDLIQEHSASKDYDQMKAMLMEVLGHQ 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+I+VF L + I +IA IQL L +L M+ + IS A L+K++ GF
Sbjct: 749 FRPEFINRIDEIVVFHPLAQDQIKAIARIQLQGLVERLESMDYQVSISDALLEKLATAGF 808
Query: 667 DLIYGAR 673
D ++GAR
Sbjct: 809 DPLFGAR 815
>gi|329895231|ref|ZP_08270895.1| ClpB protein [gamma proteobacterium IMCC3088]
gi|328922469|gb|EGG29811.1| ClpB protein [gamma proteobacterium IMCC3088]
Length = 856
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/667 (61%), Positives = 541/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ LLAG K+RG+FE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKDKRLLSLDLGALLAGAKFRGDFEERLKSVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFVDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP ++TI+ILRGL+++YEVHH V+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVNEPSEQDTIAILRGLKERYEVHHSVQITDSAIIAAAKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MDKLERRLIQLKIE EA+KR+ D +KK+L + K+I+++ +
Sbjct: 395 DEAASRIRMEIDSKPESMDKLERRLIQLKIEREAVKRDTDAGAKKQLEQLNKDIDQVGRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ + QIK +IE+ +L++ A R D +S+L+YG+L +LE++L
Sbjct: 455 YSDLEEIWKAEKAALQGAAQIKSDIEQAKLELESARRAGDLSRMSELQYGKLPELEKLLT 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ Q + + LL+ V EE+AE+VSR TGIPV+K+++ +R+KLL +E+ L
Sbjct: 515 QAEQSE------QTERQLLRNNVTDEEVAEVVSRWTGIPVAKMLEGDRDKLLRMEDALHD 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+A+RR+R+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++E++
Sbjct: 569 RVVGQDEAVRAVSDAVRRARAGLSDPNRPNGSFLFLGPTGVGKTELCKSLANFLFDSEQA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRR+PYSL+LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRRPYSLLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
ILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I+EM + +K AVM V +
Sbjct: 689 ILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDVIQEMAGEENYAAMKQAVMAIVGNH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L + I IA IQL+ L+ +L ++ L++S A L ++ GF
Sbjct: 749 FRPEFINRVDESVVFHPLAQAQIRGIAEIQLSGLRARLQAQDIQLEVSVALLDHLATAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|260775122|ref|ZP_05884020.1| ClpB protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260608823|gb|EEX34985.1| ClpB protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 857
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 536/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + ++I+FIDE+
Sbjct: 221 QRIINNEVPEGLRNKRVLSLDMGTLVAGAKYRGEFEERLKSVLNELSKEEGNVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + +E+ E +A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLSNLNEELEDKERAFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L RV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEKLLRMEEVLHARVIGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFGSLDYQGMKEQVMEVVNKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L ++ + L++S AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLQRLSKRMEERGYALEVSDKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|331006072|ref|ZP_08329408.1| ClpB protein [gamma proteobacterium IMCC1989]
gi|330420109|gb|EGG94439.1| ClpB protein [gamma proteobacterium IMCC1989]
Length = 887
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/696 (59%), Positives = 545/696 (78%), Gaps = 36/696 (5%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALEKYTVDLTSQAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I+EGLAQRI+NGEVP+ L K++L LD+ LLAG K+RGEFE+RLK ++ E+S + II
Sbjct: 215 IIEGLAQRIVNGEVPDGLKDKRVLSLDLGSLLAGAKFRGEFEERLKAVINELSKQEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKD A ERRFQ
Sbjct: 275 IFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDTALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSETDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKIE EA+K++ D++S+ RL + K I LE +
Sbjct: 395 DEAASRIRMEIDSKPEALDRLERRLIQLKIEREAVKKDDDDASRLRLASMDKSIVVLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IW EK + + +IK +E+ R+ ++ A R SD + +S+L+YG + +LE+ L
Sbjct: 455 YIDLEEIWNTEKVALHGTVEIKATLEQARVDMDAARRASDLERISQLQYGVIPELEKQLN 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ D+ + TLL+ KV EEIA++VS+ TGIPVSK+++ EREKLL++E L +
Sbjct: 515 AASQADVI------EMTLLRNKVTEEEIADVVSKWTGIPVSKMLEGEREKLLSMETELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ++AI AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQEQAIVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKTLAEFLFDSPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKH+++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDEIEKA+ DVFN
Sbjct: 629 MVRLDMSEFMEKHAVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK---------------GDK 592
ILLQ+LDDGRLTD++GRT++FRNT+IVMTSNLGSD I+E+ + G+
Sbjct: 689 ILLQVLDDGRLTDSQGRTVDFRNTVIVMTSNLGSDAIQEIGQNRSFDNVSFDLPDLAGES 748
Query: 593 ---------------EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQL 637
+ +K AVM V +FRPEFINRID+ +VF L + I IA+IQL
Sbjct: 749 TGSDGATDSANQHKYDAMKAAVMEVVVKHFRPEFINRIDEAVVFHPLAKDQIRGIADIQL 808
Query: 638 NILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
LKN+L +D+ ++ L K+S+ GFD +YGAR
Sbjct: 809 AGLKNRLADREIDITLTDQVLDKLSDAGFDPVYGAR 844
>gi|254281898|ref|ZP_04956866.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR51-B]
gi|219678101|gb|EED34450.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR51-B]
Length = 860
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/668 (62%), Positives = 541/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I+EGLAQR+INGEVP L K+IL LD+ LLAG K+RG+FE+RLK +L E+S + +I
Sbjct: 215 IIEGLAQRVINGEVPEGLKDKRILSLDLGALLAGAKFRGDFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQY+EKDAA ERRFQ
Sbjct: 275 LFVDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V+ITD AI+AA+ LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHSVDITDSAIIAAARLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K++ +++KK+L L+ ++I ++ +
Sbjct: 395 DEAASRIRMEIDSKPESMDRLERRLIQLKIEREAVKKDVTDAAKKQLELLDEQIELVQRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE++WK EK ++ + Q+K +IE ++ + A R D +S+++YG + +LE+ L+
Sbjct: 455 YSDLEEVWKSEKAQVQGAAQVKADIESAKVDLEAARRAGDLTRMSEIQYGVMPELEKRLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
D P TLLK++V EE+AE+VSR TGIPVSK+++ +REKLL +E L +
Sbjct: 515 LADSSDAPEP------TLLKSRVTEEEVAEVVSRWTGIPVSKMLEGDREKLLRMELSLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++E++
Sbjct: 569 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSLAEYLFDSEQA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDEVEKAHLDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+EM GD+ E IK AVM V
Sbjct: 689 ILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEM-AGDENYEAIKAAVMGVVGT 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINR+D+ +VF L + I IA IQL+ L+ +L ++ L +S L +++ G
Sbjct: 748 HFRPEFINRVDETVVFHPLKAEEIRGIAVIQLDSLRQRLADRDLGLDLSPEVLDHLASAG 807
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 808 FDPVYGAR 815
>gi|410084770|ref|ZP_11281491.1| ClpB protein [Morganella morganii SC01]
gi|409768415|gb|EKN52475.1| ClpB protein [Morganella morganii SC01]
Length = 812
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 542/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 110 EDQRQALKKYTIDLTERAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 169
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRG+FE+RLK +L E+S + +I
Sbjct: 170 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGALLAGAKYRGDFEERLKAVLNELSKEEGSVI 229
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 230 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 289
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 290 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDRMLPDKAIDLI 349
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+L+RR+IQLK+E +A+K+E D++SKKRL ++++E+ + E +
Sbjct: 350 DEAGASLRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASKKRLDMLEQELTEKERE 409
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+ WK EK + +Q IK E+E+ + + +A R D +S+L+YG++ +LE+ L
Sbjct: 410 YASLEEEWKAEKATLSGTQHIKAELEQAKTALEQARRTGDLTKMSELQYGKIPELEKQLA 469
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + LL+ KV EIAEI++R TGIPVS++++ EREKLL +E ++
Sbjct: 470 AANAAEDK------EMKLLRNKVTDVEIAEILARWTGIPVSRMLEGEREKLLRMEQVMHS 523
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 524 RVIGQDEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALADFLFDSDDA 583
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 584 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 643
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD+I+E + + + +K AVM V +
Sbjct: 644 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDRIQEHFGELNYDAMKGAVMEVVSHH 703
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++ I +IA IQL L +L + + I+ +AL K++ GF
Sbjct: 704 FRPEFINRIDEVVVFHPLAKEQIHAIAKIQLKRLYKRLEEHGYQVTITDSALDKLAEAGF 763
Query: 667 DLIYGAR 673
D ++GAR
Sbjct: 764 DPVFGAR 770
>gi|89255534|ref|YP_512895.1| ClpB protein [Francisella tularensis subsp. holarctica LVS]
gi|115314050|ref|YP_762773.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
gi|156501472|ref|YP_001427537.1| AAA ATPase [Francisella tularensis subsp. holarctica FTNF002-00]
gi|254366960|ref|ZP_04982997.1| clpB protein [Francisella tularensis subsp. holarctica 257]
gi|290954297|ref|ZP_06558918.1| AAA family ATPase [Francisella tularensis subsp. holarctica URFT1]
gi|422938054|ref|YP_007011201.1| chaperone clpB [Francisella tularensis subsp. holarctica FSC200]
gi|423049840|ref|YP_007008274.1| AAA ATPase [Francisella tularensis subsp. holarctica F92]
gi|89143365|emb|CAJ78535.1| ClpB protein [Francisella tularensis subsp. holarctica LVS]
gi|115128949|gb|ABI82136.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
gi|134252787|gb|EBA51881.1| clpB protein [Francisella tularensis subsp. holarctica 257]
gi|156252075|gb|ABU60581.1| ATPase, AAA family [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|407293205|gb|AFT92111.1| chaperone clpB [Francisella tularensis subsp. holarctica FSC200]
gi|421950562|gb|AFX69811.1| AAA ATPase [Francisella tularensis subsp. holarctica F92]
Length = 859
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/666 (59%), Positives = 546/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++++EI L+ +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++D+FN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADIFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKSAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|254368513|ref|ZP_04984530.1| ClpB protein [Francisella tularensis subsp. holarctica FSC022]
gi|157121407|gb|EDO65608.1| ClpB protein [Francisella tularensis subsp. holarctica FSC022]
Length = 859
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/666 (59%), Positives = 546/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++++EI L+ +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++D+FN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADIFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKSAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|419953969|ref|ZP_14470111.1| ClpB protein [Pseudomonas stutzeri TS44]
gi|387969344|gb|EIK53627.1| ClpB protein [Pseudomonas stutzeri TS44]
Length = 854
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/666 (61%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTRRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++ +I KLE +
Sbjct: 395 DEAGSRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEDDIAKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S Q++++IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQLQQKIEQAKAELEAARRKGDLARMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E++L +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEDMLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSMQIQEL-VGDPDAQRAAVMDAVGHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++++ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLAREQIAGIAEIQLARLRKRLAERELSLELTQEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|343498451|ref|ZP_08736487.1| hypothetical protein VITU9109_14823 [Vibrio tubiashii ATCC 19109]
gi|418477074|ref|ZP_13046210.1| hypothetical protein VT1337_01810 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342824423|gb|EGU58968.1| hypothetical protein VITU9109_14823 [Vibrio tubiashii ATCC 19109]
gi|384575269|gb|EIF05720.1| hypothetical protein VT1337_01810 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 857
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/701 (58%), Positives = 552/701 (78%), Gaps = 17/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + ++I+FIDE+
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK++V+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+D++S+KRL ++ E+ + E +A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDDASEKRLTILNDELAEKERAFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E++L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQT 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFGSLDYQGMKEQVMDVVGKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L + +I SIA+IQL L ++ + L +S AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQDHIKSIASIQLERLSKRMEEKGYSLDVSDKALDLIAQVGFDPVYGA 814
Query: 673 RDV-HGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 712
R + ++S+ ++P A I G +I P L
Sbjct: 815 RPLKRAIQQSV---------ENPLAKAILAGKVIPDKPVKL 846
>gi|198283746|ref|YP_002220067.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665588|ref|YP_002426377.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248267|gb|ACH83860.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517801|gb|ACK78387.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 866
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/667 (60%), Positives = 547/667 (82%), Gaps = 2/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTID TE+A GKLDPVIGRDDEIRR IQVL RRSKNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDYTERASQGKLDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLA R+INGEVP SL K++L LD+ L+AG K+RGEFE+RLK +L ++ ++ II
Sbjct: 215 IVEGLALRLINGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERLKSLLNDLEKSEGKII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
++LV+EP +E+ I+ILRGL+++YE HHGV ITDPA+VAA +LS+RYI+DR +PDKAIDL+
Sbjct: 335 RVLVDEPSVEDAIAILRGLKERYEAHHGVRITDPALVAAVQLSHRYITDRNLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKP+ +D+LERR+IQL IE A+++E DE+S+KRL +++ +I + + K
Sbjct: 395 DEAASRIKMEIDSKPQELDELERRIIQLNIERVALEKEKDEASRKRLDILQAQIKESDRK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK I+ + QI++E+++ R++++ A R +D + +++L+Y + LE L
Sbjct: 455 YQELEEVWKGEKLAIEGTSQIQKELDRKRVELDTARRANDLERMAELQYSSIPALEAQL- 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ Q + K TLL+T+VG EEIAE+V+R TGIPVSK+++ E+EKLL +E L
Sbjct: 514 HAAEIHAQSAGSGAKPTLLRTEVGEEEIAEVVARWTGIPVSKMLEGEKEKLLKMEERLQA 573
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA++AVSNAIRRSR+GLSD KRP GSF+FLGPTGVGKTEL K L+ +F++E+
Sbjct: 574 RVVGQSEAVAAVSNAIRRSRAGLSDPKRPNGSFLFLGPTGVGKTELTKALAEFLFDSEDH 633
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ +VFN
Sbjct: 634 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPEVFN 693
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E KG+ + +++AV++ V+ +
Sbjct: 694 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEFSRKGEYDSMRVAVLDVVQDH 753
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID++++FR L + I IQ+ L+++L + +MDL +S AL ++ +G+
Sbjct: 754 FRPEFLNRIDELVIFRPLTAVQLREITGIQMGFLRSRLRERDMDLVLSDGALDHLAEVGY 813
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 814 DPVYGAR 820
>gi|254482819|ref|ZP_05096056.1| ATP-dependent chaperone ClpB [marine gamma proteobacterium
HTCC2148]
gi|214036900|gb|EEB77570.1| ATP-dependent chaperone ClpB [marine gamma proteobacterium
HTCC2148]
Length = 854
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/667 (62%), Positives = 551/667 (82%), Gaps = 9/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EESRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I+EGLAQR+INGEVP L K+IL LD+ LLAG K+RGEFE+RLK +L E+S + +I
Sbjct: 213 IIEGLAQRVINGEVPEGLKDKRILSLDLGSLLAGAKFRGEFEERLKSVLNELSKEEGRVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 273 LFIDEMHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP+ E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDL+
Sbjct: 333 KVLVEEPNEEDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLV 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K+ DE++K+++ + ++I +E +
Sbjct: 393 DEAASRIRMEIDSKPEAMDKLERRLIQLKIEREAVKK--DETAKEQVKHLDEQIEVVERE 450
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE++WK EK ++ S Q+K ++E+V+L++ A R D +S+L+YG+L +LE+ L+
Sbjct: 451 FSDLEEVWKAEKASLQGSAQVKSDLEQVKLEMESARRAGDLTKMSELQYGKLPELEKQLE 510
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E Q+ + TLL+ KV EE+AE+VSR TGIP+SK+++ +REKLL +E+ L
Sbjct: 511 EA-----QVAETV-EHTLLRNKVTEEEVAEVVSRWTGIPISKMLEGDREKLLRMEDELHS 564
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++E++
Sbjct: 565 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDSEQA 624
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE+EKA+ DVFN
Sbjct: 625 MVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDEVEKAHPDVFN 684
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
ILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGS I+EM D E +K AVM+ V +
Sbjct: 685 ILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSHLIQEMASEDNYEKMKSAVMDVVGTH 744
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L + I IA+IQL L+++L + ++L+IS+A ++ ++ GF
Sbjct: 745 FRPEFINRVDESVVFHPLLQSQIRGIADIQLRGLESRLAERELNLEISEAFMEHLTVAGF 804
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 805 DPVYGAR 811
>gi|187930962|ref|YP_001890946.1| chaperone ClpB [Francisella tularensis subsp. mediasiatica FSC147]
gi|187711871|gb|ACD30168.1| chaperone ClpB [Francisella tularensis subsp. mediasiatica FSC147]
Length = 859
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/666 (59%), Positives = 546/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++++EI L+ +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++D+FN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADIFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKSAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|294142195|ref|YP_003558173.1| clpB protein [Shewanella violacea DSS12]
gi|293328664|dbj|BAJ03395.1| clpB protein [Shewanella violacea DSS12]
Length = 857
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/707 (59%), Positives = 551/707 (77%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTELAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLNELYQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S RY+SDR +PDKAIDLI
Sbjct: 335 KVLVEEPNVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSNRYVSDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE++DKLERR IQLKIE +A+ +E DE+S +RL ++KE+ ++ K
Sbjct: 395 DEAASSIRIQIDSKPEVLDKLERRSIQLKIEEQALAKETDEASIRRLYSLRKELKDVDAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A L +IW EK + +Q IK ++E+ RL ++ A R SD +S+L+YG + LE+ L
Sbjct: 455 AAELNEIWHTEKAALAGTQHIKADLEQARLNLDVARRASDLTRMSELQYGRIPALEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q TLL+ KV EIAE++SR TGIPV+K+++ E+EKLLN+E L +
Sbjct: 515 LAAQAEMQ------DMTLLRHKVTDVEIAEVLSRATGIPVAKMLEGEKEKLLNMEEALHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
V+GQ+EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 TVIGQNEAVDAVSNAIRRSRAGLADPERPIGSFLFLGPTGVGKTELCKSLAKFLFDTEAA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+ +K VMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQTRCGSLSYSEMKAEVMNVVVHS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+ +VF L+ K+I IANIQ+ L+ +L + + +L IS+ AL I+ GF
Sbjct: 749 FRPEFLNRIDETVVFHPLDEKHIEYIANIQIQALQQRLTEKDFELIISEDALALIAKAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K++L + +P A I G L+ P L+
Sbjct: 809 DPVYGARPL---KRAL-----QQEVANPLAQRILSGSLVPGKPIKLE 847
>gi|417949670|ref|ZP_12592802.1| chaperone ClpB protein [Vibrio splendidus ATCC 33789]
gi|342807810|gb|EGU42988.1| chaperone ClpB protein [Vibrio splendidus ATCC 33789]
Length = 857
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/661 (61%), Positives = 537/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDE+
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQHIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL ++ E++ E +A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTLQAELSDKERDFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQG 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F+++++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS KI+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSKIQENFNTLDYQGIKNEVMEVVGKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L ++ +L++S+ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLQHLSKRMEDNGYELEVSEKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|386022308|ref|YP_005940333.1| ClpB protein [Pseudomonas stutzeri DSM 4166]
gi|327482281|gb|AEA85591.1| ClpB protein [Pseudomonas stutzeri DSM 4166]
Length = 854
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S QI+++IE+ + + A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWKSEKAEVQGSAQIQQKIEQAKADLEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDPDAQRAAVMDAVAHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLGREQIAGIAEIQLGRLRKRLAERELSLELSQEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|365539747|ref|ZP_09364922.1| ClpV protein [Vibrio ordalii ATCC 33509]
Length = 858
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 539/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G G+ EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGRGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ E ++A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLQVLNEELKVKEREFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E+ L +RV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDVEIAEVLSKQTGIPVSKMLEEEKEKLLQMEDALHQRVIGQV 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D E IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSQIQEKFASLDYEGIKKEVMEIVGKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L ++ I SIA+IQL L ++ + L++S+ AL+ IS +GFD +YGA
Sbjct: 755 NRVDESVVFHPLAQEQIKSIASIQLARLGKRMEEKGYQLEVSEKALELISQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|269101906|ref|ZP_06154603.1| ClpB protein [Photobacterium damselae subsp. damselae CIP 102761]
gi|268161804|gb|EEZ40300.1| ClpB protein [Photobacterium damselae subsp. damselae CIP 102761]
Length = 857
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/667 (61%), Positives = 540/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYT+DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALEKYTVDLTARAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLA RI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L E+S +I
Sbjct: 215 IVEGLALRIVNGEVPEGLRNKRVLSLDMGSLIAGAKFRGEFEERLKAVLNELSQEDGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQY+EKD A ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E DE+S+KRL + +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKESDEASQKRLSDLLEELDLKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK E+E+ R + A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + TLLK KV EIA+++S+ TGIPV+K+++ ER+KLL +E L +
Sbjct: 515 LAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVAKMLEGERDKLLRMEEELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F++E++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLANFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E D E +K VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGSLDYEGLKALVMDVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L + NI IANIQL L+ +L + + L + ++AL I+ GF
Sbjct: 749 FRPEFINRVDETVVFHPLGQDNIKHIANIQLARLQKRLAEKDYRLDVDESALDLIAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|381402590|ref|ZP_09927274.1| protein disaggregation chaperone [Pantoea sp. Sc1]
gi|380735789|gb|EIB96852.1| protein disaggregation chaperone [Pantoea sp. Sc1]
Length = 857
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/668 (60%), Positives = 540/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEMLESELNQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG++ LE+ L
Sbjct: 455 YAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYGKIPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + G E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGDLGYPE-MKEIVMGVVGQ 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L K+I SIA IQL L ++L + L+IS+ AL+ ++ G
Sbjct: 748 HFRPEFINRIDEVVVFHPLAEKHIASIAQIQLQRLYHRLEERGYQLQISEEALRLLAENG 807
Query: 666 FDLIYGAR 673
+D +YGAR
Sbjct: 808 YDPVYGAR 815
>gi|85711023|ref|ZP_01042083.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina baltica OS145]
gi|85694936|gb|EAQ32874.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina baltica OS145]
Length = 856
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/667 (61%), Positives = 538/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIG+PGVGKTA
Sbjct: 155 EEKRQALDKYTIDLTERAAQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGDPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP L +K++L LD+ LLAG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIINAEVPEGLKNKRVLSLDLGALLAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYEIHHSVEITDPAIVAAASLSHRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+++E D++SKKRL + E+++LE K
Sbjct: 395 DEAASSIRMQIDSKPEDLDRLERRIIQLKLERQALQKEKDDASKKRLEHLHDELDELEKK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++W EK ++ +Q IK ++++VR +++ A R D +S+L+YG + +LER
Sbjct: 455 YGELEEVWNSEKAAVQGTQHIKSQLDQVRTEMDIARRAGDLNRMSELQYGRIPELER--- 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q D+ L +LLK +V EEIA+++SR TGIPVSK+++ EREKL+ +E+LL K
Sbjct: 512 ---QLDLALQAEMQDMSLLKNRVTDEEIADVLSRWTGIPVSKMLEGEREKLVQMESLLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AV+NAIRRSR+GL D RP GSF+FLGPTGVGKTEL K L+ +F+ +++
Sbjct: 569 RVVGQNEAVDAVANAIRRSRAGLGDPNRPIGSFLFLGPTGVGKTELSKALANFMFDTDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+ + + +K VM+ + +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDLIQAHASDNSYDEMKAMVMDVLAGH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D+ +VF L R+ I SIA QL L +L +M +++S AL I++ GF
Sbjct: 749 FRPEFLNRVDETVVFHPLGREEIRSIAEAQLQRLYARLEDRDMSIELSVEALDFIASAGF 808
Query: 667 DLIYGAR 673
D ++GAR
Sbjct: 809 DPVFGAR 815
>gi|118498299|ref|YP_899349.1| chaperone clpB [Francisella novicida U112]
gi|194323883|ref|ZP_03057658.1| ATPase, AAA family protein [Francisella novicida FTE]
gi|118424205|gb|ABK90595.1| chaperone clpB [Francisella novicida U112]
gi|194321780|gb|EDX19263.1| ATPase, AAA family protein [Francisella tularensis subsp. novicida
FTE]
Length = 859
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/666 (59%), Positives = 546/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++++EI L+ +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++DVFN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D + +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYDTVKDAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|385793710|ref|YP_005826686.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332679035|gb|AEE88164.1| ClpB protein [Francisella cf. novicida Fx1]
Length = 859
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/666 (59%), Positives = 544/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE++ + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KKRL ++++EI LE +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKKRLEILEEEIKGLESE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y E++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YKGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++DVFN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D + +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYDTVKDAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|86148867|ref|ZP_01067123.1| ClpB protein, partial [Vibrio sp. MED222]
gi|85833345|gb|EAQ51547.1| ClpB protein [Vibrio sp. MED222]
Length = 757
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 538/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IG+PGVGKTAIVEGLA
Sbjct: 61 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTAIVEGLA 120
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + ++I+FIDE+
Sbjct: 121 QRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLNELSKEEGNVILFIDEI 180
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK++V+E
Sbjct: 181 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVIVDE 240
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 241 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 300
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL ++ E+++ E +A LE+
Sbjct: 301 IRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTLQSELSEKERDFAELEE 360
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 361 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 420
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 421 MQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQA 474
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 475 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 534
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 535 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 594
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 595 DDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFNTLDYQGIKNEVMEVVGKHFRPEFL 654
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA IQL LK ++ +L++S AL+ IS +GFD +YGA
Sbjct: 655 NRVDESVVFHPLGQEHIESIAAIQLEHLKKRMEDNGYELEVSDKALRLISKVGFDPVYGA 714
Query: 673 R 673
R
Sbjct: 715 R 715
>gi|336124918|ref|YP_004566966.1| ClpV protein [Vibrio anguillarum 775]
gi|335342641|gb|AEH33924.1| ClpV protein [Vibrio anguillarum 775]
Length = 863
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 538/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 166 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 225
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 226 QRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 285
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G G+ EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 286 HTMVGAGRGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 345
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 346 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 405
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ E ++A LE+
Sbjct: 406 IRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLQVLNEELKVKEREFAELEE 465
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 466 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 525
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ V EIAE++S+ TGIPVSK+++ E+EKLL +E+ L +RV+GQ
Sbjct: 526 MQ------EMTLLRNNVTDVEIAEVLSKQTGIPVSKMLEAEKEKLLQMEDALHQRVIGQV 579
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 580 EAVEVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 639
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 640 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVL 699
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D E IK VM V +FRPEF+
Sbjct: 700 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSQIQEKFASLDYEGIKKEVMEIVGKHFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L ++ I SIA+IQL L ++ + L++S+ AL+ IS +GFD +YGA
Sbjct: 760 NRVDESVVFHPLAQEQIKSIASIQLARLGKRMEEKGYQLEVSEKALELISQVGFDPVYGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>gi|418293836|ref|ZP_12905738.1| ClpB protein [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379065221|gb|EHY77964.1| ClpB protein [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 854
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
KI V+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KIQVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KLE +
Sbjct: 395 DEAGSRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQIQEL-VGDPDAQRAAVMDAVAHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L++ + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLAREQIAGIAEIQLGRLRKRLVERELSLELSQEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|167627089|ref|YP_001677589.1| chaperone ClpB [Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|167597090|gb|ABZ87088.1| chaperone ClpB [Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 859
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/666 (60%), Positives = 542/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK LKE+S + ++I
Sbjct: 215 IVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSALKELSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL +++ EI LE +
Sbjct: 395 DEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEAEIKGLESE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y E++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K
Sbjct: 455 YQGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMAELQYGKIPELEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L K
Sbjct: 515 QIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++DVFN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D + +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYDTVKDAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRIDD IVF LN++ I IA IQ+ L+ +L +N+ L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRIDDAIVFEPLNKEMITEIAKIQIKRLEKRLRDLNIGLEVTAKAMDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|333367821|ref|ZP_08460054.1| chaperone protein ClpB [Psychrobacter sp. 1501(2011)]
gi|332978323|gb|EGK15049.1| chaperone protein ClpB [Psychrobacter sp. 1501(2011)]
Length = 862
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/667 (59%), Positives = 542/667 (81%), Gaps = 1/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTI+LTE+A +GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDALNKYTINLTERAEMGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQ+I+NG+VP L K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 212 IVEGLAQKIVNGDVPEGLRRKEVLSLDLGALIAGAKYRGEFEERLKNVLNDLAKQEGNVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+DR +PDKAIDL+
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDRKLPDKAIDLV 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D ++ ++ ++I +LE +
Sbjct: 392 DEAASRLRMEMDSKPEALGKLDSRLIQLKMQREVLKNEEDAGAQAERKVLDEQIEELEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE-RIL 366
YA+L +IW+ EK L+K SQQ+K+E++K R+ +KA+R+ D++T+SKL+Y + +LE RI
Sbjct: 452 YADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMSKLQYETIPQLEKRIT 511
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+ + + ++ LL+ KV EIAE+V+ TGIPV++++Q EREK+L +E L
Sbjct: 512 ESDLAEQKEQAGEGDRIKLLRNKVTDNEIAEVVAAATGIPVNRMLQGEREKMLAMEERLH 571
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+RVVGQDEA+ +V+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K+L+ +F++E+
Sbjct: 572 ERVVGQDEAVQSVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKSLANFLFDSED 631
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA+ DVF
Sbjct: 632 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVF 691
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
NILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM D E IK AVM V +
Sbjct: 692 NILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMAGDDYEEIKSAVMESVGQH 751
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+I+VF L + IA+IQLN L+++L + MD+K+S A+ + +G+
Sbjct: 752 FRPEFVNRIDEIVVFHPLGMSQMAGIADIQLNRLRDRLKEREMDIKLSPDAMHMLVAVGY 811
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 812 DPVYGAR 818
>gi|392552078|ref|ZP_10299215.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas spongiae
UST010723-006]
Length = 858
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 535/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T+DLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKFTVDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDE+
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGQVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA +
Sbjct: 341 PSVEDTIAILRGLKERYELHHTVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAGSH 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+LER++IQLK+E A+ +E D++SK R I+ +I +L+ +Y L++
Sbjct: 401 IRMQIDSKPEELDRLERKIIQLKLEDNALAKETDDASKSRQADIQAQIKQLDSQYNELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK E+E+ RL + A R D Q +S+L+YG + +LER L SQ +
Sbjct: 461 VWNAEKASLQGTQVIKTELEQARLDLEVARRAGDLQRMSELQYGRIPELERKLDLASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q +LL KVG EIAEI+SR TGIPV+K++Q ER+KLL++E L ++VVGQD
Sbjct: 521 MQ------DMSLLVNKVGENEIAEILSRWTGIPVAKMLQGERDKLLSMEAKLHEKVVGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ EE+++RIDM
Sbjct: 575 EAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALANFMFDTEEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRTI+F+NT+I+MTSNLGSD I+E D + +K +M+ + +FRPEFI
Sbjct: 695 DDGRLTDGQGRTIDFKNTVIIMTSNLGSDVIQEQASNNDYQGLKNTLMSVIGQHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L + +I +IA IQL L+ +L L+++ AAL KI+ GFD ++GA
Sbjct: 755 NRIDETVVFHPLAQAHIENIAKIQLQRLEQRLQDNGYQLELTDAALAKIAEAGFDPVFGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|339495683|ref|YP_004715976.1| ClpB protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338803055|gb|AEJ06887.1| ClpB protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 854
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/666 (62%), Positives = 545/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S QI+++IE+ + + A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWKSEKAEVQGSAQIQQKIEQAKADLEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDPDAQRAAVMDAVAHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLGREQIAGIAEIQLGRLRKRLAERELSLELSQEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|78484759|ref|YP_390684.1| ATPase AAA [Thiomicrospira crunogena XCL-2]
gi|78363045|gb|ABB41010.1| ATPase family associated with various cellular activities
[Thiomicrospira crunogena XCL-2]
Length = 854
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/667 (62%), Positives = 548/667 (82%), Gaps = 4/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYT+DLTE+AR GKLDPVIGRDDEIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 150 EENRQALDKYTLDLTERARSGKLDPVIGRDDEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 209
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+A LLAG KYRGEFE+RLK +LK++ + +I
Sbjct: 210 IVEGLAQRIVNGEVPEGLKNKRLLSLDLAGLLAGAKYRGEFEERLKALLKDLEKQEGSVI 269
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+ IEKDAA ERRFQ
Sbjct: 270 LFIDEIHTMVGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEYRENIEKDAALERRFQ 329
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K++V+EP E+TI+ILRGL+++YEVHHGV ITDPAI+AA+ LS RYI+DR +PDKAIDLI
Sbjct: 330 KVIVDEPSEEDTIAILRGLKERYEVHHGVAITDPAIIAAAHLSQRYITDRQLPDKAIDLI 389
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+SKKRL ++++ I+++E +
Sbjct: 390 DEAASRIRMEIDSKPEEMDRLDRRLIQLKIEREALKKEKDEASKKRLGVLQESIDEMEKE 449
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK +K ++ ++Q KEE++K R+++ A R+ + +S+L+YG + LE +K
Sbjct: 450 YADLEEIWKKDKAALQGAKQYKEELDKARIEMEAAHREGNLGKMSELQYGVIPDLEAKIK 509
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + LL+ KV EEIAE+V+R TGIP+S++++ ER+KLL +E +
Sbjct: 510 AAEEAEGEED---GQMHLLRNKVTEEEIAEVVARWTGIPISRMLEGERDKLLRMEEAIGA 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQ EA+SAVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+ +++
Sbjct: 567 KVIGQSEAVSAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELTKALADFLFDTQDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 627 IVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+E + E +K VM+ V +
Sbjct: 687 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQEKTGQATYEEMKRDVMDVVGSH 746
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRIDDI+VF L++ I SIA+IQLN L+ +L + L++S A L KI+ GF
Sbjct: 747 FRPEFINRIDDIVVFHPLDKAQIRSIADIQLNHLRQRLADNELSLELSDAVLDKIAEAGF 806
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 807 DPVYGAR 813
>gi|334706239|ref|ZP_08522105.1| ATP-dependent chaperone protein ClpB [Aeromonas caviae Ae398]
Length = 857
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 540/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A LGKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAELGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNDLAKEEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFVDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL L+ +E+ + E +
Sbjct: 395 DEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLDLLNQELTEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK + +Q IK +E+ R + A R D +S+L+YG + +LE+ L
Sbjct: 455 YNELEEVWKAEKAALAGTQHIKAALEQARQDLEVARRAGDLGRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ +V EIA++++R TGIPV+++++ EREKLL +E+ L
Sbjct: 515 LATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGEREKLLRMEDQLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D + +K +M +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYDEMKAMLMEVLTRS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I SIA IQL L N+L ++++S+ L K+ + GF
Sbjct: 749 FRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMNRLESQGFEVEVSEELLTKLVHAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|297182614|gb|ADI18773.1| hypothetical protein [uncultured gamma proteobacterium
HF4000_36I10]
Length = 870
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/662 (63%), Positives = 551/662 (83%), Gaps = 4/662 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+AR GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTERAREGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L E+S + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKNKRLLSLDLGSLLAGAKFRGEFEERLKAVLNELSKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQY+EKDAA ERRFQK+LV E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLNEYRQYLEKDAALERRFQKVLVGE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS RYI+DR +PDKAIDLIDE+A++
Sbjct: 341 PSEEDTIAILRGLKERYEVHHGVDITDSAIIAATRLSQRYITDRQLPDKAIDLIDESASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+LERRLIQLKI+ EA+K++ DES++K+L + +I+K+ +YA+LE+
Sbjct: 401 IRMEIDSKPEEMDRLERRLIQLKIQREAVKKDEDESARKQLEKLNADIDKVGKEYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK ++ + QIK E+EK +L++ A R SD +S+L+YG + +LE+ L ++
Sbjct: 461 IWLAEKASLQGANQIKSELEKAKLELESARRASDLTRMSELQYGVIPELEKRLASAGEEA 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
N+A K LL+ KV EE+AE+VSR TGIPV+K+++ EREKLL +E+ L +RVVGQD
Sbjct: 521 NNPENDARK--LLRNKVTEEEVAEVVSRWTGIPVNKMLEGEREKLLRMEDELHRRVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVS+A+RRSR+GLSD RP GSF+F+GPTGVGKTELCK L+ ++++EE+++RIDM
Sbjct: 579 EAVVAVSHAVRRSRAGLSDPNRPNGSFLFMGPTGVGKTELCKALATFLYDSEEAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEIIKLAVMNEVKIYFRPEF 611
DDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ + G + IK AV+ V +FRPEF
Sbjct: 699 DDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELARNEGGYDAIKDAVLEVVSTHFRPEF 758
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INR+D+++VFR L + + +IA+IQL L +L + + L +S AA+ K++ +GFD ++G
Sbjct: 759 INRLDEMVVFRPLEQDQVRAIADIQLAYLDKRLAERELKLSLSDAAMDKLTAVGFDPVFG 818
Query: 672 AR 673
AR
Sbjct: 819 AR 820
>gi|146283954|ref|YP_001174107.1| ClpB protein [Pseudomonas stutzeri A1501]
gi|145572159|gb|ABP81265.1| ClpB protein [Pseudomonas stutzeri A1501]
Length = 854
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/666 (61%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IWK EK ++ S QI+++IE+ + + A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWKSEKAEVQGSAQIQQKIEQAKADLEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+++ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQDL-VGDPDAQRAAVMDAVAHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLGREQIAGIAEIQLGRLRKRLAERELSLELSQEAMDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|148652685|ref|YP_001279778.1| ATPase [Psychrobacter sp. PRwf-1]
gi|148571769|gb|ABQ93828.1| ATPase AAA-2 domain protein [Psychrobacter sp. PRwf-1]
Length = 862
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/667 (59%), Positives = 541/667 (81%), Gaps = 1/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTI+LTE+A LGKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDALNKYTINLTERAELGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQ+I+NG+VP L K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 212 IVEGLAQKIVNGDVPEGLRRKEVLSLDLGALIAGAKYRGEFEERLKSVLNDLAKQEGNVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+DR +PDKAIDL+
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDRKLPDKAIDLV 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D ++ ++ ++I +LE +
Sbjct: 392 DEAASRLRMEMDSKPEALGKLDSRLIQLKMQREVLKNEEDAGAQAERKVLDEQIEELEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE-RIL 366
YA+L +IW+ EK L+K SQQ+K+E++K R+ +KA+R+ D++T+SKL+Y + +LE RI
Sbjct: 452 YADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMSKLQYETIPQLEKRIT 511
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+ + + N LL+ KV EIAE+V+ TGIPV++++Q EREK+L +E L
Sbjct: 512 ESDLAEQKEQTGEGNGIKLLRNKVTDNEIAEVVAAATGIPVNRMLQGEREKMLTMEERLH 571
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+RVVGQDEA+ +V+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K+L+ +F++E+
Sbjct: 572 ERVVGQDEAVQSVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKSLANFLFDSED 631
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA+ DVF
Sbjct: 632 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVF 691
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
NILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM D E IK +VM V +
Sbjct: 692 NILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMAGDDYEEIKASVMESVGQH 751
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+I+VF L + IA+IQL+ L+++L + MD+K+S A+ + +G+
Sbjct: 752 FRPEFVNRIDEIVVFHPLGMSQMAGIADIQLDRLRSRLKEREMDIKLSADAMHMLVAVGY 811
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 812 DPVYGAR 818
>gi|152997611|ref|YP_001342446.1| ATPase [Marinomonas sp. MWYL1]
gi|150838535|gb|ABR72511.1| ATPase AAA-2 domain protein [Marinomonas sp. MWYL1]
Length = 860
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/667 (61%), Positives = 541/667 (81%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALDKYTVDLTARAAEGKLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+A L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMAALIAGAKYRGEFEERLKALLNELAKQEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKSEGSMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP + ++I+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVLDSIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D++SK RL + EI+ L+ +
Sbjct: 395 DEAGSRIRMEMDSKPEDMDRLERRLIQLKIEKEALKKEKDKASKLRLEELDVEIDNLQKQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE+IW EK ++ +Q++KE++E VR ++ +A R + +S+L+YG + LE ++
Sbjct: 455 FSDLEEIWNAEKAAVQGAQKLKEDLETVRHEMEEARRSGNLAKMSELQYGVIPMLEAEIE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ S+ + + LLK +V EEIA +VSR TGIP+ K+++ ER+KLL +E+ L +
Sbjct: 515 KASKAE-----ETTETRLLKRRVTEEEIATVVSRWTGIPIDKMLEGERDKLLRMEDALHE 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
V+GQDEA+ AVSNA+RRSRSGL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E++
Sbjct: 570 SVMGQDEAVLAVSNAVRRSRSGLADPNRPNGSFLFLGPTGVGKTELCKSLARFLFDTEQA 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 630 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E D+ E IK VM V ++
Sbjct: 690 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEYRSADQYEEIKAKVMEVVGMH 749
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L + I IA +QL+ L ++L +M M L ++ AA ++ +G+
Sbjct: 750 FRPEFINRIDETVVFHPLMKSQIKGIATVQLSHLNDRLAEMGMSLVLTDAASDQLVEVGY 809
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 810 DPVYGAR 816
>gi|421618247|ref|ZP_16059225.1| ClpB protein [Pseudomonas stutzeri KOS6]
gi|409779801|gb|EKN59452.1| ClpB protein [Pseudomonas stutzeri KOS6]
Length = 854
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/666 (61%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++ +I +LE +
Sbjct: 395 DEAGSRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEDDIARLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQIQEL-VGDPDAQRAAVMDAVAHHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEAMDKLVAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>gi|344199838|ref|YP_004784164.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
gi|343775282|gb|AEM47838.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
Length = 866
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 547/667 (82%), Gaps = 2/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+D TE+A GKLDPVIGRDDEIRR IQVL RRSKNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTVDYTERASQGKLDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLA R+INGEVP SL K++L LD+ L+AG K+RGEFE+RLK +L ++ ++ II
Sbjct: 215 IVEGLALRLINGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERLKSLLNDLEKSEGKII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+H ++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR++IEKDAA ERRFQ
Sbjct: 275 LFIDEIHMLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRKHIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
++LV+EP +E+TI+ILRGL+++YE HHGV ITDPA+VAA++LS+RYI+DR +PDKAIDL+
Sbjct: 335 RVLVDEPSVEDTIAILRGLKERYEAHHGVRITDPALVAAAQLSHRYITDRNLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKP+ +D+LERR+IQL IE A+++E DE+S+KRL +++ +I++L K
Sbjct: 395 DEAASRIKMEIDSKPQELDELERRIIQLNIERVALEKEKDEASRKRLGILQTQISELGRK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK I+ + QI++E+++ R++++ A R +D + +++L+Y + LE L+
Sbjct: 455 YQELEEVWKGEKLAIEGTSQIQKELDRKRVELDTARRANDLERMAELQYSSIPALEAQLR 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + + K TLL+T+VG EEIAE+V+R TGIPVSK+++ E+EKLL +E L
Sbjct: 515 -NAEIHAESAGSGAKPTLLRTEVGEEEIAEVVARWTGIPVSKMLEGEKEKLLKMEERLQA 573
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA++AVSNAIRRSR+GLSD +RP GSF+FLGPTGVGKTEL K L+ +F++E+
Sbjct: 574 RVVGQSEAVAAVSNAIRRSRAGLSDPRRPNGSFLFLGPTGVGKTELSKALAEFLFDSEDH 633
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 634 LVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 693
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E KGD + +++AVM+ V+ +
Sbjct: 694 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEFGRKGDYDGMRVAVMDVVQDH 753
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID++++F L + I IQ+ L+ +L + +M L +S AL +++ +G+
Sbjct: 754 FRPEFLNRIDELVIFHPLTAVQLREITEIQMGFLRARLRERDMGLVLSDGALDRLAEVGY 813
Query: 667 DLIYGAR 673
D YGAR
Sbjct: 814 DPAYGAR 820
>gi|387887315|ref|YP_006317614.1| chaperone ClpB [Francisella noatunensis subsp. orientalis str. Toba
04]
gi|386872131|gb|AFJ44138.1| chaperone ClpB [Francisella noatunensis subsp. orientalis str. Toba
04]
Length = 859
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/662 (60%), Positives = 540/662 (81%), Gaps = 4/662 (0%)
Query: 12 GYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEG 71
G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEG
Sbjct: 159 GALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218
Query: 72 LAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFID 131
LAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE+S + +II+FID
Sbjct: 219 LAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELSKQEGNIILFID 278
Query: 132 ELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILV 191
ELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQK+LV
Sbjct: 279 ELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQKVLV 338
Query: 192 EEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAA 251
+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR +PDKAIDL+DEAA
Sbjct: 339 DEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLVDEAA 398
Query: 252 AKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANL 311
++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KKRL +++ EI LE +Y
Sbjct: 399 SQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKKRLEILETEIKGLESEYQGF 458
Query: 312 EKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQ 371
E++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG++ +LE +K+
Sbjct: 459 EELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMAELQYGKIPELEAQIKQIEN 518
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
+ + N L++T V EIA++VS+ TGIPVSK+++ E++KLLN+E+ L KRV+G
Sbjct: 519 TEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLLNMESFLHKRVIG 574
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
QD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F++E++++R+
Sbjct: 575 QDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDAMLRV 634
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSEF+EKHS+++LIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++DVFNILLQ
Sbjct: 635 DMSEFMEKHSVAKLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFNILLQ 694
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 611
+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D +K AVM V +FRPEF
Sbjct: 695 VLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYNTVKDAVMEMVLSHFRPEF 754
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NR+DD IVF LN++ I IA IQ+ L+ +L +N+ L+++ A+ K+++ GFD ++G
Sbjct: 755 VNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLKDLNIGLEVTAKAMDKLADAGFDPVFG 814
Query: 672 AR 673
AR
Sbjct: 815 AR 816
>gi|253689510|ref|YP_003018700.1| ATP-dependent chaperone ClpB [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756088|gb|ACT14164.1| ATP-dependent chaperone ClpB [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 857
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/708 (58%), Positives = 559/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+ E+++ E +
Sbjct: 395 DEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSAELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ E+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q++ LL+ +V EIA++++R TGIPVS++++ E+EKLL +E+ L +
Sbjct: 515 AATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPVSRMLESEKEKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++ V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEMRDMVLEVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L R +I SIA IQL L +L + + I+ AAL + +G
Sbjct: 748 NFRPEFINRIDEVVVFHPLGRAHITSIAKIQLQRLYKRLEERGYSVTITDAALDMLGEVG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ L+ ++P A I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPITLD 847
>gi|421080487|ref|ZP_15541408.1| Protein disaggregation chaperone [Pectobacterium wasabiae CFBP
3304]
gi|401704776|gb|EJS94978.1| Protein disaggregation chaperone [Pectobacterium wasabiae CFBP
3304]
Length = 858
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/708 (58%), Positives = 560/708 (79%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+ E+++ E +
Sbjct: 395 DEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSAELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ ++ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSQQDEEWKAEKASLTGTQNIKASLEQAKIVLEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q++ LL+ +V EIA++++R TGIPVS++++ E+EKLL +E+ L +
Sbjct: 515 AATQQE------GKTVHLLRNRVTDAEIADVLARWTGIPVSRMLESEKEKLLRMEDELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++ V++ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEMRDMVLDVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L R +I SIA IQL L +L + + I+ +AL + +G
Sbjct: 748 SFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYSVTIADSALDMLGEVG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ L+ ++P A I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPITLD 847
>gi|429093582|ref|ZP_19156164.1| ClpB protein [Cronobacter dublinensis 1210]
gi|426741478|emb|CCJ82277.1| ClpB protein [Cronobacter dublinensis 1210]
Length = 861
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 533/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 219 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+ +E DE+SKKRL ++ E+N E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLERRIIQLKLEQQALMKESDEASKKRLDMLNDELNDKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 459 YSTLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 519 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQDLHQ 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 573 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +++I SIA IQL L +L ++IS AL+ + G+
Sbjct: 753 FRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAVRISDEALQLLGENGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|411011697|ref|ZP_11388026.1| ATP-dependent chaperone protein ClpB [Aeromonas aquariorum AAK1]
Length = 857
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 543/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNDLAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI +EI + + +
Sbjct: 395 DEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLELINQEIGEKDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK + +Q IK +E+ R ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YNELEEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ +V EIA++++R TGIPV+++++ EREKLL +E+ L
Sbjct: 515 LATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGEREKLLRMEDQLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D + +K +M +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYDEMKAMLMEVLARS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I SIA IQL L ++L ++++S+A L K+ + GF
Sbjct: 749 FRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMSRLEAQGYEVEVSEALLNKLVHAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|163750160|ref|ZP_02157403.1| clpB protein [Shewanella benthica KT99]
gi|161330217|gb|EDQ01199.1| clpB protein [Shewanella benthica KT99]
Length = 857
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/707 (59%), Positives = 552/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLNELSQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDGALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP++E+TI+ILRGL+ +YE+HH VEITDPAIVAA+ +S RYISDR +PDKAIDLI
Sbjct: 335 KVLVEEPNVEDTIAILRGLKDRYELHHHVEITDPAIVAAASMSNRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE++DKLERR IQLKIE +A+ +E DE+S +RL ++KE+ ++ K
Sbjct: 395 DEAASSIRIQIDSKPEVLDKLERRSIQLKIEEQALAKETDEASIRRLDSLRKELQDVDAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A L +IW EK + +Q IK ++E+ RL ++ A R SD +S+L+YG + LE+ L
Sbjct: 455 AAELNEIWHTEKAALAGTQHIKADLEQARLNLDVARRASDLTRMSELQYGRIPALEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q TLL+ KV EIAE++SR TGIPV+K+++ E+EKLL +E L +
Sbjct: 515 LAAQAEMQ------DMTLLRHKVTDVEIAEVLSRVTGIPVAKMLEGEKEKLLQMEKALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
V+GQ+EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 SVIGQNEAVDAVSNAIRRSRAGLADPERPIGSFLFLGPTGVGKTELCKSLAKFLFDTEAA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I++ +K VMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQDRCGSLSYSEMKAEVMNVVVHS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+ +VF L+ K+I IA+IQ+ +L+ +L + + +L ISK AL I+ GF
Sbjct: 749 FRPEFLNRIDETVVFHPLDEKHIEYIAHIQIKLLQQRLAEKDYELIISKDALAFIAKAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D YGAR + K++L + ++P A I G ++ P L+
Sbjct: 809 DPAYGARPL---KRAL-----QQEVENPLAQRILSGSIVPGKPIKLE 847
>gi|308048519|ref|YP_003912085.1| ATP-dependent chaperone ClpB [Ferrimonas balearica DSM 9799]
gi|307630709|gb|ADN75011.1| ATP-dependent chaperone ClpB [Ferrimonas balearica DSM 9799]
Length = 857
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/706 (59%), Positives = 547/706 (77%), Gaps = 21/706 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALDKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ LLAG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+S+R +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAATLSHRYLSERKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +DKLERR+IQLK+E +A+ +E DE+S KRL L+K++++ LE +
Sbjct: 395 DEAASSIRLEIDSKPEPLDKLERRIIQLKLEEQALSKETDEASHKRLELLKEQLSDLEQQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L++IW EK + +Q IK +E+ R + A R SD +S+L+YG + +LE+ L
Sbjct: 455 FRELDEIWNTEKAALAGTQHIKAALEQARQDLEVARRASDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + TLLK +V EIAE++++ TGIPV+K+++ ER+KLL +E L +
Sbjct: 515 LAAQAEMQ------EMTLLKNRVTDAEIAEVLAKATGIPVAKMLEGERDKLLRMEEALHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F++ ++
Sbjct: 569 RVVGQDEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELSKALAHFMFDSADA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I++ E E+ +L V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDQIQQHFGELAYPELKEL-VYGVLLQ 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEF+NR+D+ +VF L ++ I IA IQL L+ +L + +L+IS L ++ G
Sbjct: 748 SFRPEFLNRVDETVVFHPLAQEQIAEIARIQLKGLEKRLAEKEYELRISDEVLASLATAG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKK--SPEANFIFLGDLINKGP 709
FD ++GAR L + I +K +P A I G L+ P
Sbjct: 808 FDPVFGARP----------LKRAIQQKLENPLAQQILAGKLLPGQP 843
>gi|261820453|ref|YP_003258559.1| protein disaggregation chaperone [Pectobacterium wasabiae WPP163]
gi|261604466|gb|ACX86952.1| ATP-dependent chaperone ClpB [Pectobacterium wasabiae WPP163]
Length = 858
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/708 (58%), Positives = 559/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+ E+++ E +
Sbjct: 395 DEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSAELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ ++ WK EK + +Q +K +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSQQDEEWKAEKASLTGTQNVKASLEQAKIALEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q++ LL+ +V EIA++++R TGIPVS++++ E+EKLL +E+ L +
Sbjct: 515 AATQQE------GKTVHLLRNRVTDAEIADVLARWTGIPVSRMLESEKEKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++ V++ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEMRDMVLDVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L R +I SIA IQL L +L + + I+ AAL + +G
Sbjct: 748 SFRPEFINRIDEVVVFHPLGRGHITSIAQIQLQRLYKRLEERGYSVTITNAALDMLGEVG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ L+ ++P A I G LI P LD
Sbjct: 808 FDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPIILD 847
>gi|384085053|ref|ZP_09996228.1| clpB protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 865
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/667 (60%), Positives = 547/667 (82%), Gaps = 3/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT D TE+AR GKLDPVIGRDDEIRR IQVL RRSKNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTTDYTERARQGKLDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLA R++NGEVP SL K++L LD+ L+AG K+RGEFE+RLK +L ++ ++ II
Sbjct: 215 IVEGLALRMVNGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERLKALLTDLEKSEGKII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
++LV+EP +E++I+ILRGL+++YE HHGV ITDPA+VAA++LS+RYI DR +PDKAIDL+
Sbjct: 335 RVLVDEPSVEDSIAILRGLKERYEAHHGVRITDPALVAAAQLSHRYIPDRNLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKP+ +D+LERR+IQL IE A+++E DE+S KRL +++ +I L+ K
Sbjct: 395 DEAASRIKMEIDSKPQELDELERRIIQLNIERVALEKEKDEASLKRLDILQSQIKDLDKK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EK I+ + QI++E+++ R+ ++ A R +D + +++L+Y + LE +K
Sbjct: 455 YQDLEEVWKGEKLTIEGTSQIQKELDRKRVDLDTARRANDLERMAELQYSVIPALEAQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ K TLL+T+VG EEIAE+V+R TGIPVSK+++ E+EKLL +E L
Sbjct: 515 AAETQGEG--AKQTKLTLLRTEVGEEEIAEVVARWTGIPVSKMLEGEKEKLLKMEERLQA 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA++AV+NAIRRSR+GLSD +RP GSF+FLGPTGVGKTEL K L+ +F++E+
Sbjct: 573 RVVGQSEAVAAVANAIRRSRAGLSDPRRPNGSFLFLGPTGVGKTELTKALAEFLFDSEDL 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA++DVFN
Sbjct: 633 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHADVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E + G+ + +++AVM+ V+ +
Sbjct: 693 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEFSRSGNYDAMRVAVMDVVQDH 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID++++F L + I ++Q+ L+ +L + +MDL +S+ AL +++ +G+
Sbjct: 753 FRPEFLNRIDEMVIFHPLTAVQLREITSLQMGALRARLKERDMDLLLSEGALDRLAEVGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|385870630|gb|AFI89150.1| ATP-dependent chaperone ClpB [Pectobacterium sp. SCC3193]
Length = 858
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/708 (58%), Positives = 559/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+ E+++ E +
Sbjct: 395 DEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSAELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ ++ WK EK + +Q +K +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSQQDEEWKAEKASLTGTQNVKASLEQAKIALEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q++ LL+ +V EIA++++R TGIPVS++++ E+EKLL +E+ L +
Sbjct: 515 AATQQE------GKTVHLLRNRVTDAEIADVLARWTGIPVSRMLESEKEKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++ V++ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEMRDMVLDVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L R +I SIA IQL L +L + + I+ AAL + +G
Sbjct: 748 SFRPEFINRIDEVVVFHPLGRGHITSIAQIQLQRLYKRLEERGYSVTITNAALDMLGEVG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ L+ ++P A I G LI P LD
Sbjct: 808 FDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPIILD 847
>gi|33151758|ref|NP_873111.1| ATP-dependent Clp protease subunit B [Haemophilus ducreyi 35000HP]
gi|54035812|sp|Q7VNH1.1|CLPB_HAEDU RecName: Full=Chaperone protein ClpB
gi|33147979|gb|AAP95500.1| ATP-dependant Clp protease chain B [Haemophilus ducreyi 35000HP]
Length = 856
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/704 (58%), Positives = 557/704 (79%), Gaps = 20/704 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+A+ GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LQKYTIDLTERAKTGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDE+
Sbjct: 219 QRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVILFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 279 HTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 339 PSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ +Y+ LE+
Sbjct: 399 LRMEIDSKPEPLDKLERRIIQLKLERQALQKEKDEASRQRLAKLDEEMTAKAQEYSALEE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK+ + +Q +K E+E R+ +++A R +++ +S+L+YG + LE+ L Q
Sbjct: 459 VWKAEKSALLGTQHLKTELENARIAMDQAKRADNFEKMSELQYGTIPALEKQL----QDA 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
I+ N LL+TKV EEIAE++S+ TGIP++K+++ E+EKLL +E +L RV+GQ+
Sbjct: 515 IKREEENNDHHLLRTKVTEEEIAEVLSKATGIPITKMMEGEKEKLLRMEQVLHSRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NAI RSR+GL+D +P GSF+FLGPTGVGKTEL KTL+ +F++E +I+RIDM
Sbjct: 575 EAVEAVANAILRSRAGLADPNKPIGSFLFLGPTGVGKTELSKTLANFLFDDENAIVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYE+GGYLTE VRR+PYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLA----VMNEVKIYFRP 609
DDGRLTD +GRT++FRNT+++MTSNLG+ I+E + EI LA VM+ V +FRP
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGAHLIQE----NAEITYLAMKEMVMSVVSQHFRP 750
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EFINRID+ +VF L++++I +IANIQL L +L + + IS AL IS GFD +
Sbjct: 751 EFINRIDETVVFHPLDQQHIRAIANIQLQRLIRRLAERGYQVTISDTALDHISQAGFDSL 810
Query: 670 YGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
+GAR + K+++ L ++P A I G L+ P +D
Sbjct: 811 FGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNNPVIID 846
>gi|227329202|ref|ZP_03833226.1| protein disaggregation chaperone [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 858
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/708 (58%), Positives = 558/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+ E+++ E +
Sbjct: 395 DEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSAELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ E+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q++ LL+ +V EIA++++R TGIPVS++++ E+EKLL +E+ L +
Sbjct: 515 AATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPVSRMLESEKEKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++ V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEMRDMVLEVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L R +I SIA IQL L +L + + I+ AAL + +G
Sbjct: 748 NFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYSVTITDAALDMLGEVG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ L+ ++P A I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPITLD 847
>gi|192359582|ref|YP_001983648.1| chaperone ClpB [Cellvibrio japonicus Ueda107]
gi|190685747|gb|ACE83425.1| ClpB [Cellvibrio japonicus Ueda107]
Length = 892
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/685 (60%), Positives = 549/685 (80%), Gaps = 32/685 (4%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 169 LEKYTVDLTARAEAGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 228
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK ++ E++ + II+F+DEL
Sbjct: 229 QRIVNGEVPEGLKDKRLLALDLGALLAGAKFRGEFEERLKSVINELAKQEGRIILFVDEL 288
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 289 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQKVLVDE 348
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 349 PGEEDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLIDEAASR 408
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+LERRLIQLKIE EA+K++ DE+SKKRL I ++I+K+E +Y +LE+
Sbjct: 409 IRMEIDSKPEEMDRLERRLIQLKIEREAVKKDEDEASKKRLAKIDQDIDKIEREYGDLEE 468
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ S +IK ++E+ RL++ + RK D +S+L+YG + +LE+ L SQ +
Sbjct: 469 IWRAEKAALQGSHEIKSQLEQARLELEEKRRKGDLARMSELQYGIIPQLEKQLDMASQAE 528
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L KRV+GQ
Sbjct: 529 MM------EMKLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEEALHKRVIGQH 582
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNA+RR+R+GLSDA RP GSF+FLGPTGVGKTELCK L+ +F+ ++++RIDM
Sbjct: 583 EAVVAVSNAVRRARAGLSDANRPNGSFLFLGPTGVGKTELCKALAEFLFDTSDAMVRIDM 642
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 643 SEFMEKHSVARLIGAPPGYVGYEEGGYLTESVRRKPYSVVLLDEVEKAHPDVFNILLQVL 702
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI------------------- 594
+DGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ + DK
Sbjct: 703 EDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELAE-DKSFDTVNFDFGVTDSMNSSLNN 761
Query: 595 ------IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 648
+K AVM V +FRPEFINRID+++VF L R+ I IA+IQL L+ +L + +
Sbjct: 762 ENRYNAMKDAVMEVVAGHFRPEFINRIDEVVVFHPLGREQIRGIADIQLAQLRKRLAERD 821
Query: 649 MDLKISKAALKKISNIGFDLIYGAR 673
+ L++ A +++++++GFD +YGAR
Sbjct: 822 LGLELDAAVMERLASVGFDPVYGAR 846
>gi|403059616|ref|YP_006647833.1| endopeptidase Clp ATP-binding subunit ClpB [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|402806942|gb|AFR04580.1| endopeptidase Clp ATP-binding chain B (ClpB) [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 858
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/708 (58%), Positives = 558/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+ E+++ E +
Sbjct: 395 DEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSAELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ E+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q++ LL+ +V EIA++++R TGIPVS++++ E+EKLL +E+ L +
Sbjct: 515 AATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPVSRMLESEKEKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++ V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEMRDMVLEVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L R +I SIA IQL L +L + + I+ AAL + +G
Sbjct: 748 SFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYSVTITDAALDVLGEVG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ L+ ++P A + G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQLI-----ENPLAQQMLGGKLIPGKPITLD 847
>gi|88857985|ref|ZP_01132627.1| ATP-dependent protease, Hsp 100 [Pseudoalteromonas tunicata D2]
gi|88819602|gb|EAR29415.1| ATP-dependent protease, Hsp 100 [Pseudoalteromonas tunicata D2]
Length = 860
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/661 (62%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT+DLTE+A LGKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKYTVDLTERAELGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDE+
Sbjct: 221 QRIINGEVPEGLKDKRVLSLDLGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP LSRGELHC+GATTL+EYRQYIEKDAA ERRFQK+LVEE
Sbjct: 281 HTIVGAGKSDGAMDAGNMLKPALSRGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA +
Sbjct: 341 PTVEDTIAILRGLKERYELHHSVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAGSS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
++++IDSKPE++DKLER++IQLK+E A+ +E DE+S +R IK++I L+ +Y L++
Sbjct: 401 LRMQIDSKPEVLDKLERKIIQLKLEDNALAKEKDEASLQRQQDIKQQILVLDKQYNELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L SQ +
Sbjct: 461 VWIAEKASLQGTQVIKTELEQARLDLEIARRASDLQRMSELQYGRIPELERKLDLASQVE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q LL+ KVG EIAEI+SR TGIPV+K++Q ER KLL +E L +V+GQD
Sbjct: 521 MQ------DMRLLRNKVGENEIAEILSRWTGIPVTKMLQGERSKLLKMEENLHTQVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+ E++++RIDM
Sbjct: 575 EAVTAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELTKALATFLFDTEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D E +K +M+ + FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDVIQEHAVNSDYERLKAMLMDVLTTQFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRIDD +VF L+ ++I IA+IQL LK +L+ ++++ AL +++ GFD ++GA
Sbjct: 755 NRIDDTVVFHPLSTEHIKHIADIQLAKLKQRLVDNGYTMRLTDEALSQLALAGFDPVFGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|392307907|ref|ZP_10270441.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas citrea
NCIMB 1889]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/667 (61%), Positives = 533/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKYTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGKRVLSLDLGALVAGAKYRGEFEERLKSVLNELSKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVSEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR ++ IN+LE +
Sbjct: 395 DEAGSSIRLQIDSKPEQLDKLERRIIQLKLEDNALAKEKDEASQKRRAEMQALINELEGE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L
Sbjct: 455 YRELDEVWNAEKASLQGTQVIKAELEQSRLDLEVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + LLK +VG +EIAEI+SR TGIPV+K++Q EREKLL +E+ L
Sbjct: 515 LASQAEMQ------EMNLLKNQVGEDEIAEILSRWTGIPVAKMLQGEREKLLAMEDELHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++
Sbjct: 569 KVIGQDEAVHAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAHFMFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD ++E D +K VM +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIVQEQASNNDYAGLKERVMGVLATQ 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I IA+IQL+ L +L + ++ AL+KI+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLVTEHIKEIASIQLDKLTTRLHEKGFQFGLTSDALEKIAQSGF 808
Query: 667 DLIYGAR 673
D ++GAR
Sbjct: 809 DPVFGAR 815
>gi|84393598|ref|ZP_00992351.1| ClpB protein [Vibrio splendidus 12B01]
gi|84375807|gb|EAP92701.1| ClpB protein [Vibrio splendidus 12B01]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 536/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDE+
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGSLIAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+E+RQYIEKD A ERRFQK++V+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEHRQYIEKDPALERRFQKVIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL ++ E+++ E +A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTLQSELSEKERDFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQA 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F+++++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFNTLDYQGIKNEVMEVVGKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L + +I SIA IQL LK ++ +L++ ALK IS +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQAHIESIAAIQLEHLKKRMEDNGYELEVLDKALKLISQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|354596494|ref|ZP_09014511.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
gi|353674429|gb|EHD20462.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/709 (58%), Positives = 560/709 (78%), Gaps = 17/709 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLA RI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLALRIVNGEVPEGLKNKRVLSLDMGSLVAGAKYRGEFEERLKGVLTDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+KRL L+ E+ + E +
Sbjct: 395 DEAASSIRIQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASQKRLELLSSELEEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGQMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIAE+++R TGIPVS++++ EREKLL +E L +
Sbjct: 515 AATQLE------GKTMHLLRNRVTDTEIAEVLARWTGIPVSRMLESEREKLLRMEEALHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F+++++
Sbjct: 569 RVIGQDEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E+ + V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYAEMRGM-VLEVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L R++I SIA IQL L +L + + I+ AAL+++ IG
Sbjct: 748 SFRPEFINRIDEVVVFHPLGRQHIASIAKIQLQRLYKRLEERGYTVTITDAALERLGEIG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
FD +YGAR + K+++ L+ ++P A I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQLI-----ENPLAQQILSGKLIPGKPVTLDA 848
>gi|262279691|ref|ZP_06057476.1| ATP-dependent chaperone ClpB [Acinetobacter calcoaceticus RUH2202]
gi|262260042|gb|EEY78775.1| ATP-dependent chaperone ClpB [Acinetobacter calcoaceticus RUH2202]
Length = 859
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/668 (60%), Positives = 541/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKSKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I ++E +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKAEVTHLEKQIAEVEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLLN+E L
Sbjct: 512 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQGEREKLLNMEGFLHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTIVMNAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDTAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|227115221|ref|ZP_03828877.1| protein disaggregation chaperone [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 858
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/708 (58%), Positives = 558/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+ E+++ E +
Sbjct: 395 DEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSAELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ E+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q++ LL+ +V EIA++++R TGIPVS++++ E+EKLL +E+ L +
Sbjct: 515 AATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPVSRMLESEKEKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++ V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEMRDMVLEVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L R +I SIA IQL L +L + + I+ AAL + +G
Sbjct: 748 SFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYSVTITDAALDMLGEVG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ L+ ++P A + G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQLI-----ENPLAQQMLGGKLIPGKPITLD 847
>gi|422022041|ref|ZP_16368550.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
gi|414097791|gb|EKT59444.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/707 (58%), Positives = 555/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL +++ E+ + E +
Sbjct: 395 DEAGASLRMQMDSKPEALDRLERRIIQLKLEQQALKKESDDASKKRLEMLEDELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+ WK EK + +Q IK E+E R ++ KA R D +S+L+YG + +LE+ L+
Sbjct: 455 YASLEEEWKAEKASLTGTQHIKTELEHARYEMEKARRGGDLAKMSELQYGRIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + LL+ KV EIAEI++R TGIPVS++++ EREKLL +E+ L K
Sbjct: 515 SATKAE------GKNMKLLRNKVTDSEIAEILARWTGIPVSRMLESEREKLLRMEHQLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVVAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKH+++RL+GAPPGY+GYEEGGYLTE VRR+PYS+IL DEIEKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHAVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILFDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E + +K VM +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQESFGRISYPEMKDMVMEVLTRS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L++ NI +IANIQL+ L +L + ++ + AAL+KI G+
Sbjct: 749 FRPEFINRIDEVVVFHPLDKANIANIANIQLSRLYKRLEEHGYEVSATPAALEKIGEAGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D I+GAR + K+++ + ++P A I G LI P LD
Sbjct: 809 DPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPVVLD 847
>gi|423198677|ref|ZP_17185260.1| chaperone ClpB [Aeromonas hydrophila SSU]
gi|404629867|gb|EKB26592.1| chaperone ClpB [Aeromonas hydrophila SSU]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 542/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNDLAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI +EI + + +
Sbjct: 395 DEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLELINQEIGEKDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK + +Q IK +E+ R ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YNELEEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ +V EIA++++R TGIPV+++++ EREKLL +E+ L
Sbjct: 515 LATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGEREKLLRMEDQLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K +M +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYNEMKAMLMEVLARS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I SIA IQL L ++L ++++S+A L K+ + GF
Sbjct: 749 FRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMSRLEAQGYEVEVSEALLNKLVHAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|374619251|ref|ZP_09691785.1| ATP-dependent chaperone ClpB [gamma proteobacterium HIMB55]
gi|374302478|gb|EHQ56662.1| ATP-dependent chaperone ClpB [gamma proteobacterium HIMB55]
Length = 873
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/666 (60%), Positives = 537/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L+KYT+DLT +A G+LDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EQQRQALEKYTVDLTARAEAGELDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I+EGLAQR++NGEVP L K+IL LD+ LLAG K+RG+FE+RLK +L E+ +I
Sbjct: 215 IIEGLAQRVVNGEVPEGLKGKRILALDLGSLLAGAKFRGDFEERLKAVLNELGKEDGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
++LV+EP+ E+TI+ILRGL+++YEVHH V ITD AI+AA+ LS RYI+DR +PDKAIDLI
Sbjct: 335 RVLVDEPNEEDTIAILRGLKERYEVHHSVAITDSAIIAAARLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K++ E++ K++ L+ ++I++++ +
Sbjct: 395 DEAASRIRMEIDSKPESMDKLERRLIQLKIEREAVKKDTTEAAVKQVELLDEQIDQVQRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+A+LE++W EK +++ S QIK +IE+ + + A R D +S+++YG + +LE+ L+
Sbjct: 455 FADLEEVWTAEKAVVQGSAQIKSDIEQAKQDLEAAHRTGDLARMSEIQYGVIPELEKRLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
D P TLL+++V +E+AE+VSR TGIPVSK+++ +R +LL +E L +
Sbjct: 515 AAEGADQPEP------TLLRSRVTEDEVAEVVSRWTGIPVSKMLEGDRSRLLRMEASLKE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA++ V+NAIRRSR+GLSD KRP GSF+FLGPTGVGKTELCK+L+ +F++++S
Sbjct: 569 RVVGQDEAVTVVANAIRRSRAGLSDPKRPNGSFLFLGPTGVGKTELCKSLAEFLFDSDQS 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I++M D + +K VM V F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQDMADDDYDDMKREVMGAVAENF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L +I +IA IQL L +L + L+IS A +++S +GFD
Sbjct: 749 RPEFINRIDESVVFHPLGADHIRAIAKIQLQGLAERLEDRELTLEISDAVFEQLSRVGFD 808
Query: 668 LIYGAR 673
++GAR
Sbjct: 809 PVFGAR 814
>gi|157962981|ref|YP_001503015.1| ATPase [Shewanella pealeana ATCC 700345]
gi|157847981|gb|ABV88480.1| ATPase AAA-2 domain protein [Shewanella pealeana ATCC 700345]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/668 (60%), Positives = 532/668 (79%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP + +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINNEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELSQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+LERR IQLK+E +A+ +E DE+S +RL ++ E+ +E K
Sbjct: 395 DEAASSIRIQIDSKPESLDRLERRAIQLKLEEQALSKEADEASLRRLDTLRAELKDVEAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A L +IW EK + +Q IK ++E+ R+ + A R D +S+L+YG + +LE+ L
Sbjct: 455 GAELNEIWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q TLL+ KV EIAE++S+ TGIPVSK+++ ER+KLL +E+ L +
Sbjct: 515 LAAQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLEGERDKLLKMEDALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ +VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E +
Sbjct: 569 RVIGQNEAVDSVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLAKFLFDTESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRVDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I ++ G + +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-QLGFGTQSYDEMKSDVMQVVMQ 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEF+NR+D+ +VF L+ KNI IA IQ+ LK +L + L++S AL I+ G
Sbjct: 748 NFRPEFLNRVDEAVVFHPLDEKNIAHIAKIQIEGLKKRLADKDYGLEMSDDALALIARAG 807
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 808 FDPVYGAR 815
>gi|442611509|ref|ZP_21026215.1| ClpB protein [Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441747437|emb|CCQ12277.1| ClpB protein [Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 857
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/667 (61%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALEKFTVDLTERAIQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLNELAKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEYRHYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVSEPSVEDTIAILRGLKERYELHHSVQITDPAIVAAAHLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR ++ I++LE +
Sbjct: 395 DEAGSSIRLQIDSKPEPLDKLERRIIQLKLEDNALAKEKDEASRKRRDEMQALISELEAE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L
Sbjct: 455 YKELDEVWNAEKASLQGTQAIKAELEQARLDMEVARRASDLQRMSELQYGRIPELERKLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + +LL+ +V +EIAEI+SR TGIPVSK++Q EREKLL +E+ L K
Sbjct: 515 LASQAEMQ------EMSLLRNQVSEDEIAEILSRWTGIPVSKMLQGEREKLLQMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L++ +F+ E++
Sbjct: 569 KVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALASFMFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D + +K VM +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAQNNDYKTLKEKVMTVLTTQ 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I IA IQL L+ +L + ++S AL KI+ GF
Sbjct: 749 FRPEFINRIDETVVFHPLITEHIKHIAKIQLTRLEKRLTEKGFKFELSDGALDKIAASGF 808
Query: 667 DLIYGAR 673
D ++GAR
Sbjct: 809 DPVFGAR 815
>gi|423204378|ref|ZP_17190934.1| chaperone ClpB [Aeromonas veronii AMC34]
gi|404627243|gb|EKB24048.1| chaperone ClpB [Aeromonas veronii AMC34]
Length = 857
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 543/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNDLAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI +EI + + +
Sbjct: 395 DEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRKRLELINQEIGEKDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 LATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDKLLRMEEQLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D + +K +M+ +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYDEMKAMLMDVLTRS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I SIA IQL L +L ++++S+A L+K+ + GF
Sbjct: 749 FRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMGRLEAQGYEVEVSEALLEKLVHAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|50122267|ref|YP_051434.1| protein disaggregation chaperone [Pectobacterium atrosepticum
SCRI1043]
gi|49612793|emb|CAG76243.1| ClpB protein (heat shock protein f84.1) [Pectobacterium
atrosepticum SCRI1043]
Length = 858
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/700 (58%), Positives = 557/700 (79%), Gaps = 17/700 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+ E+++ E +
Sbjct: 395 DEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSTELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ ++ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSRQDEEWKAEKASLTGTQNIKASLEQAKISLEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q++ LL+ +V EIA++++R TGIPVS++++ E+EKLL +E+ L +
Sbjct: 515 AATQQE------GKTVHLLRNRVTDVEIADVLARWTGIPVSRMLEGEKEKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++ V++ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEMRDMVLDVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L R +I SIA IQL L +L + + I+ AAL + +G
Sbjct: 748 SFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYSVTITDAALDMLGEVG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
FD +YGAR + K+++ L+ ++P A I G+LI
Sbjct: 808 FDPVYGARPL---KRAIQQLI-----ENPLAQQILGGELI 839
>gi|365971689|ref|YP_004953250.1| chaperone protein ClpB [Enterobacter cloacae EcWSU1]
gi|365750602|gb|AEW74829.1| Chaperone protein ClpB [Enterobacter cloacae EcWSU1]
Length = 861
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/699 (58%), Positives = 553/699 (79%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 219 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++ +E++ E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDMLNEELDDKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+
Sbjct: 459 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK--- 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q +I + LL+ KV EEIAE+++R TGIPV+++++ ER+KLL +E L +
Sbjct: 516 ---QLEIATQSEGKTMRLLRNKVTDEEIAEVLARWTGIPVARMMESERDKLLRMEQDLHQ 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 573 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K VM V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVMGVVSHS 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 753 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDDALKLLSANGY 812
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 813 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 843
>gi|83648559|ref|YP_436994.1| chaperone activity ATPase ATP-binding subunit [Hahella chejuensis
KCTC 2396]
gi|83636602|gb|ABC32569.1| ATPase with chaperone activity, ATP-binding subunit [Hahella
chejuensis KCTC 2396]
Length = 859
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/668 (61%), Positives = 545/668 (81%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L ++TIDLT +A GKLDPVIGRDDEIRR IQVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDRFTIDLTSRATEGKLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLALDMGALIAGAKFRGEFEERLKGVLNELAKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR++IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYREFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP++E+TI+ILRGL+++YEVHHGVEITD AI+AA++LS+RYI+DR +PDKAIDL+
Sbjct: 335 KVLVDEPNVEDTIAILRGLKERYEVHHGVEITDSAIIAAAKLSHRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLK++ EA+K+E D +SKK + + +I+++E +
Sbjct: 395 DEAASQIRMEIDSKPEPLDRLERRLIQLKMQREALKKEKDAASKKSVDELNTQIDEMEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+A+LE++W EK ++ +QQIK ++E+ R+ + A R+ D +S+L+YG + +LE+ L
Sbjct: 455 FADLEEVWSSEKAALQGTQQIKSQLEQARVDLENARRQGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++ + LL+ KV EEIAEIVS+ TGIPV+K+++ EREKLL +E L +
Sbjct: 515 MASQAEML------EMRLLRNKVSEEEIAEIVSKWTGIPVAKMLEGEREKLLRMEEALHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSLAGFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKI 605
ILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+ M D+ IK AV+ V
Sbjct: 689 ILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQAMGGQDENYNEIKDAVLEVVGR 748
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L + I IA IQL IL +L + ++ +++S A+ ++ +G
Sbjct: 749 HFRPEFINRIDEVVVFHPLTAEQIRGIALIQLEILNRRLQEQDLKVELSAEAMATLAEVG 808
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 809 FDPIYGAR 816
>gi|113460345|ref|YP_718406.1| ATP-dependent Clp protease subunit B [Haemophilus somnus 129PT]
gi|112822388|gb|ABI24477.1| ATP-dependent Clp protease, subunit B [Haemophilus somnus 129PT]
Length = 856
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +LKE++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERLKAVLKELAQEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E DE+S+KRL L+++E+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDEASRKRLDLLEEELGEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE +WK EK + +Q IK E++ ++++ +A R SD+ +S+L+YG + +LE+ L
Sbjct: 455 YAELEDVWKAEKAALSGAQHIKAELDNAKIQMEQARRISDFAKMSELQYGRIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++SR TGIPV+K+++ E++KLL +E L K
Sbjct: 515 QAESAE------GKEMTLLRNRVTDEEIAEVLSRATGIPVAKMMEGEKDKLLRMEQELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +
Sbjct: 569 RVVGQSEAVVAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDDENA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKELDYNAMKEIVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA IQL L ++ L+ + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLAKENIRAIATIQLQRLVKRMETHGYQLEFTDATLDFIGEVGYD 808
Query: 668 LIYGAR 673
+IYGAR
Sbjct: 809 VIYGAR 814
>gi|170718829|ref|YP_001783422.1| ATPase [Haemophilus somnus 2336]
gi|168826958|gb|ACA32329.1| ATPase AAA-2 domain protein [Haemophilus somnus 2336]
Length = 856
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +LKE++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERLKAVLKELAQEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E DE+S+KRL L+++E+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDEASRKRLDLLEEELGEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE +WK EK + +Q IK E++ ++++ +A R SD+ +S+L+YG + +LE+ L
Sbjct: 455 YAELEDVWKAEKAALSGAQHIKAELDNAKIQMEQARRISDFAKMSELQYGRIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++SR TGIPV+K+++ E++KLL +E L K
Sbjct: 515 QAESAE------GKEMTLLRNRVTDEEIAEVLSRATGIPVAKMMEGEKDKLLRMEQELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +
Sbjct: 569 RVVGQSEAVVAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDDENA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKELDYNAMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA IQL L ++ L+ + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLAKENIRAIATIQLQRLVKRMETHGYQLEFTDATLDFIGEVGYD 808
Query: 668 LIYGAR 673
+IYGAR
Sbjct: 809 VIYGAR 814
>gi|209694256|ref|YP_002262184.1| chaperone ClpB (heat-shock protein) [Aliivibrio salmonicida
LFI1238]
gi|208008207|emb|CAQ78351.1| chaperone ClpB (heat-shock protein) [Aliivibrio salmonicida
LFI1238]
Length = 861
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/670 (61%), Positives = 541/670 (80%), Gaps = 13/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IG+PGVGKTA
Sbjct: 155 EEKRQALEKFTIDLTEQAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LDI L+AG K+RGEFE+RLK +L E++ + +II
Sbjct: 215 IVEGLAQRIINGEVPEGLKHKRVLSLDIGSLIAGAKFRGEFEERLKAVLNELAKEEGNII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RG+LHC+GATTL+EYR+YIEKD A ERRFQ
Sbjct: 275 LFIDEVHTMVGAGKGEGSMDAGNMLKPALARGDLHCVGATTLDEYRKYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K++V+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVIVDEPTVEDTIAILRGLKERYEIHHHVEITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +DKLER++IQLKIE +A+ +E D++S KRL + E+ + E
Sbjct: 395 DEAASSIRMEIDSKPESLDKLERKIIQLKIEQQALVKESDDASLKRLDSLNLELREKERD 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+IWK EK + +Q IK E++ R ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YSELEEIWKAEKAALSGTQHIKTELDIARSNMDIARRAGDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LLK KV EIAE++SR TGIPV+K+++ ER+KLL +E +L
Sbjct: 515 LAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVNKMLEGERDKLLKMEAMLHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++E++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFMFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EMEKGDKEIIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+KI+ E++ G IK VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEKIQQHFGELDYGG---IKELVMDVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+FRPEF+NR+D+ +VF L ++NI SIA IQL L+ +L + + LK+S AL IS
Sbjct: 746 GQHFRPEFLNRVDEAVVFHPLGQENIKSIAKIQLQRLEKRLNEKDYQLKVSNEALTLISE 805
Query: 664 IGFDLIYGAR 673
GFD +YGAR
Sbjct: 806 AGFDPVYGAR 815
>gi|389839942|ref|YP_006342026.1| protein disaggregation chaperone ClpB [Cronobacter sakazakii ES15]
gi|387850418|gb|AFJ98515.1| protein disaggregation chaperone ClpB [Cronobacter sakazakii ES15]
Length = 857
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 533/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNDELSDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE++L
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKLLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +K+I SIA IQL L +L + IS AL+ + G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAVHISDDALQLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|330831466|ref|YP_004394418.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Aeromonas
veronii B565]
gi|423211882|ref|ZP_17198415.1| chaperone ClpB [Aeromonas veronii AER397]
gi|328806602|gb|AEB51801.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Aeromonas
veronii B565]
gi|404612683|gb|EKB09741.1| chaperone ClpB [Aeromonas veronii AER397]
Length = 857
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/667 (60%), Positives = 544/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLTDLAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI +EI + + +
Sbjct: 395 DEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRKRLELINQEIGEKDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+KLL +E+ L
Sbjct: 515 LATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDKLLRMEDQLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + D + +K +M+ +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMKAMLMDVLTRS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I SIA IQL L +L ++++S+A L+K+ + GF
Sbjct: 749 FRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMGRLEAQGYEVEVSEALLEKLVHAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|423203218|ref|ZP_17189796.1| chaperone ClpB [Aeromonas veronii AER39]
gi|404613447|gb|EKB10469.1| chaperone ClpB [Aeromonas veronii AER39]
Length = 857
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/667 (60%), Positives = 543/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLTDLAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI +EI + + +
Sbjct: 395 DEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRKRLELINQEIGEKDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+KLL +E+ L
Sbjct: 515 LATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDKLLRMEDQLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + D + +K +M+ +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMKAMLMDVLTRS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L +I SIA IQL L +L ++++S+A L+K+ + GF
Sbjct: 749 FRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEVEVSEALLEKLVHAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|197284295|ref|YP_002150167.1| protein disaggregation chaperone [Proteus mirabilis HI4320]
gi|227357800|ref|ZP_03842148.1| chaperone ClpB [Proteus mirabilis ATCC 29906]
gi|425067193|ref|ZP_18470309.1| chaperone ClpB [Proteus mirabilis WGLW6]
gi|425073294|ref|ZP_18476400.1| chaperone ClpB [Proteus mirabilis WGLW4]
gi|194681782|emb|CAR41000.1| chaperone ClpB (heat-shock protein F84.1) [Proteus mirabilis
HI4320]
gi|227161910|gb|EEI46928.1| chaperone ClpB [Proteus mirabilis ATCC 29906]
gi|404595272|gb|EKA95817.1| chaperone ClpB [Proteus mirabilis WGLW4]
gi|404601488|gb|EKB01897.1| chaperone ClpB [Proteus mirabilis WGLW6]
Length = 858
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/661 (61%), Positives = 540/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L ++S + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKNKRVLSLDMGSLLAGAKYRGEFEERLKAVLNDLSKQEGSVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA A
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLIDEAGAS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+++++DSKPE +D+L+RR+IQLK+E +A+++E D++SKKRL ++ +E+ + E +Y++LE+
Sbjct: 401 LRMQMDSKPEALDRLDRRIIQLKLEQQALQKESDDASKKRLAMLNEELAEKEKEYSSLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ R+ + +A R D +S+++YG++ LE+ L E ++ +
Sbjct: 461 EWKAEKAELTGTQHIKAELEQARIALEQARRSGDLAKMSEIQYGQIPTLEKQLAEANKTE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LL+ KV EIAEI++R TGIPVS++++ EREKLL +E L +RV+GQD
Sbjct: 521 DK------HMKLLRNKVTDAEIAEILARWTGIPVSRMLEGEREKLLRMEQELHRRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVNAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALADFLFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM+ V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGTLDYPAMKTIVMDVVGHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++NI +IA IQL L +L + + I+ AAL+K+ +GFD IYGA
Sbjct: 755 NRIDEVVVFHPLGKENIAAIAQIQLRRLYQRLEERGYHVTITGAALEKLGEVGFDPIYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|406675303|ref|ZP_11082492.1| chaperone ClpB [Aeromonas veronii AMC35]
gi|404627635|gb|EKB24435.1| chaperone ClpB [Aeromonas veronii AMC35]
Length = 857
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/667 (60%), Positives = 543/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLTDLAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI +EI + + +
Sbjct: 395 DEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRKRLELINQEIGEKDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+KLL +E+ L
Sbjct: 515 LATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDKLLRMEDQLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + D + +K +M+ +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMKTMLMDVLTRS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L +I SIA IQL L +L ++++S+A L+K+ + GF
Sbjct: 749 FRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEVEVSEALLEKLVHAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|432802779|ref|ZP_20036748.1| chaperone ClpB [Escherichia coli KTE84]
gi|431347921|gb|ELG34798.1| chaperone ClpB [Escherichia coli KTE84]
Length = 857
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 535/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK++S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKQLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|417286004|ref|ZP_12073295.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07793]
gi|386251245|gb|EII97412.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07793]
Length = 857
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/667 (61%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L
Sbjct: 515 AATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+
Sbjct: 569 RVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|377579335|ref|ZP_09808305.1| chaperone protein ClpB [Escherichia hermannii NBRC 105704]
gi|377539445|dbj|GAB53470.1| chaperone protein ClpB [Escherichia hermannii NBRC 105704]
Length = 857
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/699 (58%), Positives = 550/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTLDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALLKESDEASKKRLDMLNEELSDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L +
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGDLDYSHMKDMVLTVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +K+I SIA IQL L +L + +++S AL+ + G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYKRLEERGYQVQMSDEALRLLGENGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|345300451|ref|YP_004829809.1| ATP-dependent chaperone ClpB [Enterobacter asburiae LF7a]
gi|345094388|gb|AEN66024.1| ATP-dependent chaperone ClpB [Enterobacter asburiae LF7a]
Length = 857
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/693 (59%), Positives = 550/693 (79%), Gaps = 15/693 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDMLNEELDDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMSELQYGKIPELEKQLEAATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREKLLRMEQDLHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++++++IRIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMIRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKELVLGVVSHSFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ + ++P A I G+LI
Sbjct: 815 RPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|299770934|ref|YP_003732960.1| ATP-dependent chaperone ClpB [Acinetobacter oleivorans DR1]
gi|298701022|gb|ADI91587.1| ATP-dependent chaperone ClpB [Acinetobacter oleivorans DR1]
Length = 859
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/668 (60%), Positives = 541/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKSKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I ++E +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKAEVNHLEKQIAEVEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLLN+E L
Sbjct: 512 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLNMEEFLHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTIVMNAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDTAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|283786204|ref|YP_003366069.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
gi|282949658|emb|CBG89277.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
Length = 857
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/693 (59%), Positives = 549/693 (79%), Gaps = 15/693 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E+N E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELNDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKEMVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAKIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ + ++P A I G+LI
Sbjct: 815 RPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|87122250|ref|ZP_01078133.1| endopeptidase Clp ATP-binding chain B (ClpB) [Marinomonas sp.
MED121]
gi|86162570|gb|EAQ63852.1| endopeptidase Clp ATP-binding chain B (ClpB) [Marinomonas sp.
MED121]
Length = 859
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/667 (61%), Positives = 535/667 (80%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L K+T+DLT +A G+LDPVIGRDDEIRR IQVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKFTVDLTARAAEGQLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRI+NGEVP L +K++L LD+A L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIVNGEVPEGLKNKRVLSLDMAALIAGAKYRGEFEERLKSLLTELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP LSRGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKSEGSMDAGNMLKPALSRGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP + +TI+ILRGL+++YE+HHGV+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVADTIAILRGLKERYEIHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D +SK+RL ++ +I E +
Sbjct: 395 DEAGSRIRMEMDSKPEDMDRLERRLIQLKIEKEALKKEKDRASKQRLSKLEADIAIAEKQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE+IW EK ++ +Q++KEE+E VR ++ +A R + +S+L+YG + LE ++
Sbjct: 455 FSDLEEIWNAEKAQLQGAQKLKEELESVRQEMEEARRDGNLAKMSELQYGVIPMLEAEIE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ S + ++ LL+ +V EE+A +VSR TGIPV K++Q EREKLL +EN L
Sbjct: 515 KAS-----MAEELDQTQLLRNRVSEEEVATVVSRWTGIPVDKMLQGEREKLLTMENELHA 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
V+GQ+EA++AV+NA+RRSRSGL+D RP GSF+FLGPTGVGKTELCK+L+ +F+ E S
Sbjct: 570 SVIGQEEAVTAVANAVRRSRSGLADPNRPNGSFLFLGPTGVGKTELCKSLATFLFDTEAS 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIG+PPGY+GYEEGGYLTE VRR+PYS++LLDEIEKA+ DVFN
Sbjct: 630 MVRVDMSEFMEKHSVARLIGSPPGYVGYEEGGYLTEAVRRRPYSVLLLDEIEKAHPDVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+ ++ E IK V+ V +
Sbjct: 690 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQNYRSNEQYEEIKHDVLAVVGNH 749
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L + I IA IQ+ L +L +M M L +S+ AL +++ +G+
Sbjct: 750 FRPEFINRIDETVVFHPLMQSQIHGIARIQMTHLNGRLQEMGMTLALSEQALDRLAEVGY 809
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 810 DPVYGAR 816
>gi|56460289|ref|YP_155570.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina loihiensis L2TR]
gi|56179299|gb|AAV82021.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina loihiensis L2TR]
Length = 857
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 528/661 (79%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIG+PGVGKTAIVEGLA
Sbjct: 161 LDKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGDPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +L E+S + II+FIDE+
Sbjct: 221 QRIVNGEVPEGLKHKRVLSLDLGALLAGAKFRGEFEERLKAVLTELSKEEGRIILFIDEM 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PNVEDTIAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRKLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+LERR+IQLK+E +A+++E D++SKKRL ++ E+++ E KY LE+
Sbjct: 401 IRMQIDSKPEDLDRLERRIIQLKLERQALQKEKDDASKKRLEILHDELDEQERKYEELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK ++ +Q IK ++E+ R ++ A R D +S+L+YG + +LER Q D
Sbjct: 461 VWNTEKAAVQGTQHIKAQLEQARTDMDIARRAGDLNRMSELQYGRIPELER------QLD 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ L +LLK +V EEIA+++SR TGIPV+++++ EREKLL++E + RVVGQ+
Sbjct: 515 LALQAEMQDMSLLKNRVTEEEIADVLSRWTGIPVNRMLEGEREKLLHMEEQIHSRVVGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL D RP GSF+FLGPTGVGKTEL K L+ +F+ + +++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLGDPNRPIGSFLFLGPTGVGKTELSKALANFMFDTDHAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E K E +K VM + +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDLIQEHAKEHTYEQMKAEVMEVLAHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L I SIA QL +L +L + L++ AL ++ GFD ++GA
Sbjct: 755 NRVDETVVFHPLGESEIRSIAQFQLQLLYKRLEDKDYQLELDDKALSHLARTGFDPVFGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|332289023|ref|YP_004419875.1| protein disaggregation chaperone [Gallibacterium anatis UMN179]
gi|330431919|gb|AEC16978.1| protein disaggregation chaperone [Gallibacterium anatis UMN179]
Length = 857
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/668 (61%), Positives = 541/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALQKYTIDLTARAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L EI+ + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLRHKRVLSLDMGALIAGAKYRGEFEERLKAVLNEIAKEEGRII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +DKLERR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPQPLDKLERRIIQLKLEQQALQKEEDDASRKRLEMLEKELAEKEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK + +Q IK E++ + K+ +A R D +S+LKY + LE+ L+
Sbjct: 455 YSELEEVWKSEKAALSGAQHIKAELDNAKTKMEQAYRAGDIAKMSELKYSTIPALEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E L K
Sbjct: 515 QAENAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHRDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + GD +K VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQS-QAGDLSYGEMKELVMSVVGQ 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+ +VF L ++NI +IA+IQL L N++ + L S+ AL + +G
Sbjct: 748 HFRPEFINRIDETVVFHPLAKENIRAIASIQLQRLINRMKERGYLLHFSEQALDYLGQVG 807
Query: 666 FDLIYGAR 673
+D +YGAR
Sbjct: 808 YDPVYGAR 815
>gi|288550291|ref|ZP_06390995.1| ATP-dependent chaperone protein ClpB [Enterobacter cancerogenus
ATCC 35316]
gi|288315678|gb|EFC54616.1| ATP-dependent chaperone protein ClpB [Enterobacter cancerogenus
ATCC 35316]
Length = 861
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/693 (59%), Positives = 550/693 (79%), Gaps = 15/693 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 225 QRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++ +E+++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDMLNEELDEKERQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK------QLE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
I + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L RV+GQ+
Sbjct: 519 IATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLESEREKLLRMEQDLHHRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 579 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K VM V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKELVMGVVSHSFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDDALKLLSENGYDPVYGA 818
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ + ++P A I G+LI
Sbjct: 819 RPL---KRAIQQQI-----ENPLAQQILSGELI 843
>gi|401764807|ref|YP_006579814.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400176341|gb|AFP71190.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 857
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/699 (58%), Positives = 552/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK--- 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q +I + LL+ KV EIAE+++R TGIPV+++++ ER+KLL +E L +
Sbjct: 512 ---QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVMGVVSHS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDDALKLLSENGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|429087804|ref|ZP_19150536.1| ClpB protein [Cronobacter universalis NCTC 9529]
gi|426507607|emb|CCK15648.1| ClpB protein [Cronobacter universalis NCTC 9529]
Length = 857
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 533/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++ E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDMLNDELSDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLESERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +++I SIA IQL L +L + IS AL+ + G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAVHISDDALQLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|417879013|ref|ZP_12523600.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH3]
gi|342230396|gb|EGT95235.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH3]
Length = 859
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/668 (60%), Positives = 542/668 (81%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I ++E +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQITEVEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHMEEFLHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTIVMNAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + +A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|427426223|ref|ZP_18916287.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-136]
gi|425697009|gb|EKU66701.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-136]
Length = 859
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/668 (60%), Positives = 541/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I ++E +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKAEVTHLEKQIAEVEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLLN+E L
Sbjct: 512 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLNMEEFLHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTIVMNAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDTAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|375134056|ref|YP_004994706.1| ATP-dependent protease [Acinetobacter calcoaceticus PHEA-2]
gi|325121501|gb|ADY81024.1| ATP-dependent protease [Acinetobacter calcoaceticus PHEA-2]
Length = 859
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/668 (60%), Positives = 541/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I ++E +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKAEVTHLEKQIAEVEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLLN+E L
Sbjct: 512 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLNMEEFLHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTIVMNAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDTAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|156932865|ref|YP_001436781.1| protein disaggregation chaperone [Cronobacter sakazakii ATCC
BAA-894]
gi|156531119|gb|ABU75945.1| hypothetical protein ESA_00662 [Cronobacter sakazakii ATCC BAA-894]
Length = 861
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 532/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 219 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ E++ E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNDELSDKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 459 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 519 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQDLHQ 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 573 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +K+I SIA IQL L +L + IS AL+ + G+
Sbjct: 753 FRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAVHISDDALQLLGENGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|384082013|ref|ZP_09993188.1| ATP-dependent protease [gamma proteobacterium HIMB30]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/681 (58%), Positives = 542/681 (79%), Gaps = 8/681 (1%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
DEE+ G L KY +DLT +A GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKT
Sbjct: 153 DEENRGALDKYCLDLTARASDGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKT 212
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEGLA RI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +LKE++ + I
Sbjct: 213 AIVEGLAARIVNGEVPEGLKGKRVLSLDMGSLIAGAKFRGEFEERLKAVLKELAQQEGQI 272
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY EKDAA ERRF
Sbjct: 273 ILFIDEIHTMVGAGKSEGAMDAGNMLKPALARGELHCVGATTLDEYRQYFEKDAALERRF 332
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QK+LV EP +TI+ILRGL+ KYEVHHGVEI+D AI+AA++LS RYI+DR +PDKAIDL
Sbjct: 333 QKVLVGEPTETDTIAILRGLKPKYEVHHGVEISDSAIIAAAKLSSRYITDRQLPDKAIDL 392
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
+DEAA++I++E+DSKPE +D+L+RRLIQLKIE EA+K+E DE+SK RL+ +++ I ++
Sbjct: 393 MDEAASRIRLEMDSKPEELDRLDRRLIQLKIEREALKKEKDEASKARLIELEETIAEVAK 452
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+ + LE++W EK Q IKEE+++ + + +A R D +S+++YG + L
Sbjct: 453 EASGLEEVWASEKAQTHGVQAIKEELDRAEIDLEQARRAGDLARMSEIQYGVIPSL---- 508
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
EK D Q N +++ L++++V EEIAE+VSR TGIPV+K+++ E++KLL +E+ L
Sbjct: 509 -EKRMADAQEANESDEGKLVRSRVTEEEIAEVVSRWTGIPVAKMLEGEKDKLLQMEDALH 567
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
RVVGQD A++AV+NA+RRSRSGLSD KRP GSF+FLGPTGVGKTELCK+L+ +F++E+
Sbjct: 568 ARVVGQDTAVTAVANAVRRSRSGLSDPKRPNGSFLFLGPTGVGKTELCKSLAEFLFDSED 627
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+++RIDMSEF+EKHS++RL+GAPPGY+GYE+GGYLTE VRR+PY+++LLDE+EKA+ DVF
Sbjct: 628 AMVRIDMSEFMEKHSVARLVGAPPGYVGYEQGGYLTEAVRRRPYAVVLLDEVEKAHPDVF 687
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
NILLQ+LDDGRLTD +GRT++F N+++VMTSNLGSD I+ M E I+ AVM V +
Sbjct: 688 NILLQVLDDGRLTDGQGRTVDFSNSVVVMTSNLGSDLIQSMVGESHETIRDAVMGVVSTH 747
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
F+PEFINRIDD +VF L R++I I ++QL+ L+ +L ++ +++ +K+ G+
Sbjct: 748 FQPEFINRIDDAVVFHALGREHIRGILDVQLSYLRARLDELEYGFELTDEVAEKLCEAGY 807
Query: 667 DLIYGARDVHGCKKSLSILLK 687
D +YGAR + K+++ + L+
Sbjct: 808 DPVYGARPL---KRAIQVYLE 825
>gi|242240264|ref|YP_002988445.1| protein disaggregation chaperone [Dickeya dadantii Ech703]
gi|242132321|gb|ACS86623.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech703]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/708 (58%), Positives = 557/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKHKRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVAQPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL ++ E+ + E +
Sbjct: 395 DEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDDASLKRLEILNAELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK +E+ +L + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSKLEEEWKAEKASLTGTQNIKAALEQAKLALEQARRQGDLGRMSELQYGKIPELEKELA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIAE+++R TGIPVS++++ ER+KLL +E + +
Sbjct: 515 AANQVE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLESERDKLLRMEQEMHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+A +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAAFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL--AVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ GD ++ V+N V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQD-RFGDMNYGQMRDMVLNVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R +I SIA IQL L +L + + IS AAL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLARNHIASIAQIQLQRLYKRLEERGYSVSISDAALELLGKSG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ ++ ++P A I G+L+ P LD
Sbjct: 808 FDPVYGARPL---KRAIQQMI-----ENPLAQRILSGELLPGKPIVLD 847
>gi|421450965|ref|ZP_15900333.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|396064558|gb|EJI72943.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLAMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|424741779|ref|ZP_18170120.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-141]
gi|422944552|gb|EKU39543.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-141]
Length = 859
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/668 (60%), Positives = 541/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKSKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I ++E +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKAEVTHLEKQIAEVEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLLN+E L
Sbjct: 512 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQGEREKLLNMEGFLHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VM+ V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRAIVMSAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLNVDDTAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|331658742|ref|ZP_08359684.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA206]
gi|419912524|ref|ZP_14430975.1| protein disaggregation chaperone [Escherichia coli KD1]
gi|432899701|ref|ZP_20110253.1| chaperone ClpB [Escherichia coli KTE192]
gi|433029525|ref|ZP_20217380.1| chaperone ClpB [Escherichia coli KTE109]
gi|331053324|gb|EGI25353.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA206]
gi|388391521|gb|EIL52984.1| protein disaggregation chaperone [Escherichia coli KD1]
gi|431425234|gb|ELH07305.1| chaperone ClpB [Escherichia coli KTE192]
gi|431542333|gb|ELI17504.1| chaperone ClpB [Escherichia coli KTE109]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/661 (61%), Positives = 535/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E++IRIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMIRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V++ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLDVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|395231533|ref|ZP_10409821.1| disaggregation chaperone [Citrobacter sp. A1]
gi|424734303|ref|ZP_18162842.1| protein disaggregation chaperone [Citrobacter sp. L17]
gi|394714742|gb|EJF20646.1| disaggregation chaperone [Citrobacter sp. A1]
gi|422891883|gb|EKU31894.1| protein disaggregation chaperone [Citrobacter sp. L17]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/693 (59%), Positives = 549/693 (79%), Gaps = 15/693 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKECQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDMVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ + ++P A I G+LI
Sbjct: 815 RPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|422369617|ref|ZP_16450017.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 16-3]
gi|315298640|gb|EFU57895.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 16-3]
Length = 861
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/661 (61%), Positives = 535/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 225 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 525 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E++IRIDM
Sbjct: 579 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V++ V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLDVVSHNFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 818
Query: 673 R 673
R
Sbjct: 819 R 819
>gi|147365|gb|AAA24422.1| ATP-dependent protease binding subunit [Escherichia coli]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|366161829|ref|ZP_09461691.1| protein disaggregation chaperone [Escherichia sp. TW09308]
gi|432373208|ref|ZP_19616246.1| chaperone ClpB [Escherichia coli KTE11]
gi|430895214|gb|ELC17485.1| chaperone ClpB [Escherichia coli KTE11]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYARMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|378985221|ref|YP_005248377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|312913650|dbj|BAJ37624.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LDI L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDIGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|420374600|ref|ZP_14874564.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
gi|391316060|gb|EIQ73544.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
Length = 820
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/699 (59%), Positives = 551/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 118 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 177
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 178 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 237
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 238 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 297
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 298 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 357
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 358 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 417
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 418 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 477
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 478 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQDLHS 531
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 532 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 591
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 592 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 651
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 652 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDMVLGVVSQN 711
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 712 FRPEFINRIDEVVVFHPLGEKHIASIATIQLQRLYKRLEERGYEIHISDEALKLLSVNGY 771
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 772 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 802
>gi|378446075|ref|YP_005233707.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|261247854|emb|CBG25683.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLESEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|169796605|ref|YP_001714398.1| ATP-dependent protease [Acinetobacter baumannii AYE]
gi|184157485|ref|YP_001845824.1| ATPase [Acinetobacter baumannii ACICU]
gi|213156282|ref|YP_002318702.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB0057]
gi|215484066|ref|YP_002326291.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB307-0294]
gi|239503505|ref|ZP_04662815.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB900]
gi|260557553|ref|ZP_05829768.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301346300|ref|ZP_07227041.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB056]
gi|301510716|ref|ZP_07235953.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB058]
gi|301597427|ref|ZP_07242435.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB059]
gi|332853545|ref|ZP_08434809.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6013150]
gi|332868410|ref|ZP_08438141.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6013113]
gi|332872452|ref|ZP_08440423.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6014059]
gi|384131580|ref|YP_005514192.1| clpB [Acinetobacter baumannii 1656-2]
gi|384142570|ref|YP_005525280.1| ATP-dependent protease [Acinetobacter baumannii MDR-ZJ06]
gi|385236903|ref|YP_005798242.1| chaperone ATPase [Acinetobacter baumannii TCDC-AB0715]
gi|387124549|ref|YP_006290431.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii MDR-TJ]
gi|403675029|ref|ZP_10937230.1| clpB [Acinetobacter sp. NCTC 10304]
gi|407932224|ref|YP_006847867.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii TYTH-1]
gi|416148412|ref|ZP_11602323.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
baumannii AB210]
gi|417543969|ref|ZP_12195055.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC032]
gi|417551549|ref|ZP_12202627.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-18]
gi|417552182|ref|ZP_12203252.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-81]
gi|417562555|ref|ZP_12213434.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC137]
gi|417565785|ref|ZP_12216659.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC143]
gi|417568293|ref|ZP_12219156.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC189]
gi|417572053|ref|ZP_12222907.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Canada BC-5]
gi|417579119|ref|ZP_12229952.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-17]
gi|417869415|ref|ZP_12514402.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH1]
gi|417872866|ref|ZP_12517752.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH2]
gi|417883709|ref|ZP_12527933.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH4]
gi|421199178|ref|ZP_15656342.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC109]
gi|421205359|ref|ZP_15662450.1| ATP-dependent protease [Acinetobacter baumannii AC12]
gi|421455087|ref|ZP_15904434.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-123]
gi|421536750|ref|ZP_15982981.1| ATP-dependent protease [Acinetobacter baumannii AC30]
gi|421621489|ref|ZP_16062408.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC074]
gi|421625407|ref|ZP_16066259.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC098]
gi|421628517|ref|ZP_16069287.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC180]
gi|421632625|ref|ZP_16073273.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-13]
gi|421644563|ref|ZP_16085041.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-235]
gi|421646324|ref|ZP_16086776.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-251]
gi|421652335|ref|ZP_16092694.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC0162]
gi|421654307|ref|ZP_16094637.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-72]
gi|421657285|ref|ZP_16097558.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-83]
gi|421661648|ref|ZP_16101821.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC110]
gi|421665248|ref|ZP_16105370.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC087]
gi|421672478|ref|ZP_16112434.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC099]
gi|421674167|ref|ZP_16114102.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC065]
gi|421679164|ref|ZP_16119043.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC111]
gi|421686917|ref|ZP_16126654.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-143]
gi|421690662|ref|ZP_16130330.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-116]
gi|421696636|ref|ZP_16136218.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-692]
gi|421700351|ref|ZP_16139868.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-58]
gi|421703022|ref|ZP_16142490.1| clpB [Acinetobacter baumannii ZWS1122]
gi|421706742|ref|ZP_16146146.1| clpB [Acinetobacter baumannii ZWS1219]
gi|421790248|ref|ZP_16226474.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-82]
gi|421790785|ref|ZP_16226979.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-2]
gi|421798163|ref|ZP_16234191.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-21]
gi|421800821|ref|ZP_16236790.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Canada BC1]
gi|421804761|ref|ZP_16240664.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-A-694]
gi|421806445|ref|ZP_16242309.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC035]
gi|424052980|ref|ZP_17790512.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab11111]
gi|424060511|ref|ZP_17798002.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab33333]
gi|424064469|ref|ZP_17801954.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab44444]
gi|425747416|ref|ZP_18865424.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-348]
gi|425754539|ref|ZP_18872400.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-113]
gi|445408747|ref|ZP_21432647.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-57]
gi|445452387|ref|ZP_21444918.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-A-92]
gi|445459136|ref|ZP_21447476.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC047]
gi|445467392|ref|ZP_21450716.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC338]
gi|445476784|ref|ZP_21453971.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-78]
gi|445486448|ref|ZP_21457452.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
AA-014]
gi|169149532|emb|CAM87421.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter baumannii AYE]
gi|183209079|gb|ACC56477.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
baumannii ACICU]
gi|193076896|gb|ABO11616.2| ATP-dependent protease Hsp 100 [Acinetobacter baumannii ATCC 17978]
gi|213055442|gb|ACJ40344.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB0057]
gi|213987437|gb|ACJ57736.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB307-0294]
gi|260409179|gb|EEX02482.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|322507800|gb|ADX03254.1| clpB [Acinetobacter baumannii 1656-2]
gi|323517400|gb|ADX91781.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
baumannii TCDC-AB0715]
gi|332728578|gb|EGJ59950.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6013150]
gi|332733409|gb|EGJ64592.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6013113]
gi|332739338|gb|EGJ70194.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6014059]
gi|333364933|gb|EGK46947.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
baumannii AB210]
gi|342230540|gb|EGT95373.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH1]
gi|342232941|gb|EGT97704.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH2]
gi|342235364|gb|EGT99968.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH4]
gi|347593063|gb|AEP05784.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter baumannii
MDR-ZJ06]
gi|385879041|gb|AFI96136.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii MDR-TJ]
gi|395525137|gb|EJG13226.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC137]
gi|395554588|gb|EJG20590.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC189]
gi|395557541|gb|EJG23542.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC143]
gi|395565145|gb|EJG26793.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC109]
gi|395568257|gb|EJG28931.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-17]
gi|398325140|gb|EJN41327.1| ATP-dependent protease [Acinetobacter baumannii AC12]
gi|400207621|gb|EJO38591.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Canada BC-5]
gi|400212877|gb|EJO43836.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-123]
gi|400381857|gb|EJP40535.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC032]
gi|400386004|gb|EJP49079.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-18]
gi|400392441|gb|EJP59487.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-81]
gi|404561397|gb|EKA66632.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-692]
gi|404564040|gb|EKA69232.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-116]
gi|404566527|gb|EKA71670.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-143]
gi|404570733|gb|EKA75806.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-58]
gi|404668463|gb|EKB36372.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab33333]
gi|404671058|gb|EKB38927.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab11111]
gi|404673205|gb|EKB41004.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab44444]
gi|407193008|gb|EKE64180.1| clpB [Acinetobacter baumannii ZWS1122]
gi|407193360|gb|EKE64526.1| clpB [Acinetobacter baumannii ZWS1219]
gi|407900805|gb|AFU37636.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii TYTH-1]
gi|408504704|gb|EKK06439.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-235]
gi|408505461|gb|EKK07182.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC0162]
gi|408511074|gb|EKK12728.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-72]
gi|408517711|gb|EKK19249.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-251]
gi|408697909|gb|EKL43411.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC074]
gi|408698708|gb|EKL44196.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC098]
gi|408706349|gb|EKL51671.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC180]
gi|408708733|gb|EKL54003.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-13]
gi|408713861|gb|EKL59017.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-83]
gi|408715654|gb|EKL60779.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC110]
gi|409985317|gb|EKO41539.1| ATP-dependent protease [Acinetobacter baumannii AC30]
gi|410379109|gb|EKP31716.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC099]
gi|410384928|gb|EKP37426.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC065]
gi|410390712|gb|EKP43094.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC087]
gi|410391656|gb|EKP44023.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC111]
gi|410395066|gb|EKP47381.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-21]
gi|410395333|gb|EKP47639.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-82]
gi|410404813|gb|EKP56871.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-2]
gi|410406692|gb|EKP58695.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Canada BC1]
gi|410410778|gb|EKP62670.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-A-694]
gi|410417789|gb|EKP69557.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC035]
gi|425493990|gb|EKU60212.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-348]
gi|425496768|gb|EKU62885.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-113]
gi|444754396|gb|ELW79013.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-A-92]
gi|444769521|gb|ELW93699.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
AA-014]
gi|444774489|gb|ELW98571.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC047]
gi|444776558|gb|ELX00599.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC338]
gi|444777310|gb|ELX01341.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-78]
gi|444780683|gb|ELX04619.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-57]
gi|452951611|gb|EME57057.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii MSP4-16]
Length = 859
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/668 (60%), Positives = 542/668 (81%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I ++E +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHMEEFLHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTIVMNAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + +A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|432432832|ref|ZP_19675258.1| chaperone ClpB [Escherichia coli KTE187]
gi|432845561|ref|ZP_20078344.1| chaperone ClpB [Escherichia coli KTE141]
gi|433208716|ref|ZP_20392389.1| chaperone ClpB [Escherichia coli KTE97]
gi|430951678|gb|ELC70893.1| chaperone ClpB [Escherichia coli KTE187]
gi|431394006|gb|ELG77549.1| chaperone ClpB [Escherichia coli KTE141]
gi|431729349|gb|ELJ92981.1| chaperone ClpB [Escherichia coli KTE97]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRMGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|424800712|ref|ZP_18226254.1| ClpB protein [Cronobacter sakazakii 696]
gi|429120813|ref|ZP_19181474.1| ClpB protein [Cronobacter sakazakii 680]
gi|423236433|emb|CCK08124.1| ClpB protein [Cronobacter sakazakii 696]
gi|426324731|emb|CCK12211.1| ClpB protein [Cronobacter sakazakii 680]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 532/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNDELSDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +K+I SIA IQL L +L + IS AL+ + G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAVHISDDALQLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|395234382|ref|ZP_10412606.1| protein disaggregation chaperone [Enterobacter sp. Ag1]
gi|394730828|gb|EJF30655.1| protein disaggregation chaperone [Enterobacter sp. Ag1]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/699 (58%), Positives = 550/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASQKRLSMLNEELEDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ ER+KLL +E L +
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGERDKLLRMEKELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + + IS ALK IS G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGERHIASIAQIQLQRLYKRLEERGYGVSISDDALKLISENGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|260549974|ref|ZP_05824189.1| ATPase with chaperone activity [Acinetobacter sp. RUH2624]
gi|424056249|ref|ZP_17793770.1| ATP-dependent chaperone ClpB [Acinetobacter nosocomialis Ab22222]
gi|425741319|ref|ZP_18859469.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-487]
gi|445434253|ref|ZP_21439946.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC021]
gi|260406966|gb|EEX00444.1| ATPase with chaperone activity [Acinetobacter sp. RUH2624]
gi|407441289|gb|EKF47795.1| ATP-dependent chaperone ClpB [Acinetobacter nosocomialis Ab22222]
gi|425492625|gb|EKU58879.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-487]
gi|444756658|gb|ELW81198.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC021]
Length = 859
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/668 (60%), Positives = 542/668 (81%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I +++ +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEVWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHMEEFLHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTVVMNAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + +A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|331684248|ref|ZP_08384840.1| ATP-dependent chaperone protein ClpB [Escherichia coli H299]
gi|387617905|ref|YP_006120927.1| protein disaggregation chaperone [Escherichia coli O83:H1 str. NRG
857C]
gi|450191583|ref|ZP_21891282.1| protein disaggregation chaperone [Escherichia coli SEPT362]
gi|312947166|gb|ADR27993.1| protein disaggregation chaperone [Escherichia coli O83:H1 str. NRG
857C]
gi|331077863|gb|EGI49069.1| ATP-dependent chaperone protein ClpB [Escherichia coli H299]
gi|449319227|gb|EMD09281.1| protein disaggregation chaperone [Escherichia coli SEPT362]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E++IRIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMIRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|153871333|ref|ZP_02000531.1| ClpB protein [Beggiatoa sp. PS]
gi|152072199|gb|EDN69467.1| ClpB protein [Beggiatoa sp. PS]
Length = 826
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/693 (59%), Positives = 547/693 (78%), Gaps = 9/693 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGE G GKTAIVEGLA
Sbjct: 130 LEKYTIDLTERALKGKLDPVIGRDDEIRRVVQVLQRRTKNNPVLIGEAGTGKTAIVEGLA 189
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP SL +K +L LD+ L+AG K+RGEFE+RLK +L +++ + II+FIDEL
Sbjct: 190 QRIINGEVPESLKNKHLLSLDMGALIAGAKFRGEFEERLKAVLSDLAKQEGQIILFIDEL 249
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+Y+EKDAA ERRFQK+LV E
Sbjct: 250 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYVEKDAALERRFQKVLVNE 309
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P++E+TI+ILRGL+++YEVHHGV+ITDPAIVAA+ LS+RYI+DR +PDKAIDL+DEA ++
Sbjct: 310 PNVEDTIAILRGLKERYEVHHGVDITDPAIVAAATLSHRYITDRQLPDKAIDLVDEAGSR 369
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE +DKL+RRLIQLKIE EA+K+E D +SK RL + EI +LE + A+L +
Sbjct: 370 IRMEIDSKPERIDKLDRRLIQLKIEREAMKKEKDRASKLRLEKLHDEIEQLEKELADLME 429
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++D ++KEE+E+ L + A R +D + +++L+Y ++ L++ L SQ +
Sbjct: 430 IWRTEKASVQDVSKVKEELEQAHLALETAGRANDLEQMAQLQYEKIPSLKKQLVIASQVE 489
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ V EEIA++VS+ TGIPVSK+++ ER+KLL +E + +RVVGQD
Sbjct: 490 -----QKGNMQLLRNAVTEEEIADVVSKWTGIPVSKMLEGERDKLLRMEEAVHQRVVGQD 544
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GL+D +P GSF+FLGPTGVGKTELCK L+ +F+ +E+++R+DM
Sbjct: 545 EAVHTVANAIRRSRAGLADPNKPNGSFLFLGPTGVGKTELCKALANFLFDTDEAMVRLDM 604
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGYIGY+EGGYLTE VRRKPYS+ILLDE+EKA+ DVF +LLQ+L
Sbjct: 605 SEFMEKHSVARLIGAPPGYIGYDEGGYLTEAVRRKPYSVILLDEVEKAHPDVFGVLLQVL 664
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM + E +K AVM V +FRPEFI
Sbjct: 665 DDGRLTDGQGRTVDFRNTVIVMTSNLGSQFIQEMAGEENYETMKTAVMEIVGQHFRPEFI 724
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+DDI+VF L R +I +IA++Q++ L+ +L +M+L + AL+ + GFD +YGA
Sbjct: 725 NRVDDIVVFHPLGRTHIRAIADLQIDYLRKRLQAQHMNLVVDDIALEHLGEAGFDPVYGA 784
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ LL+ + A GD I
Sbjct: 785 RPL---KRAIQQLLENSLAQEILAGQFMPGDTI 814
>gi|293608681|ref|ZP_06690984.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829254|gb|EFF87616.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 838
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/668 (60%), Positives = 541/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 131 EDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 190
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 191 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 250
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 251 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 310
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 311 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 370
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I ++E +
Sbjct: 371 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKAEVTHLEKQIAEVEKE 430
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 431 YNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 490
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLLN+E L
Sbjct: 491 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLNMEEFLHD 545
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 546 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 605
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 606 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 665
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 666 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTIVMNAVSQ 724
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + A + + G
Sbjct: 725 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDTAFDLLIDAG 784
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 785 FDPVYGAR 792
>gi|296104261|ref|YP_003614407.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|392980273|ref|YP_006478861.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
dissolvens SDM]
gi|295058720|gb|ADF63458.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|392326206|gb|AFM61159.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 537/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK--- 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q +I + LL+ KV EIAE+++R TGIPV+++++ ER+KLL +E L +
Sbjct: 512 ---QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSHN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDDALKLLSENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|293411983|ref|ZP_06654706.1| ATP-dependent chaperone ClpB [Escherichia coli B354]
gi|291468754|gb|EFF11245.1| ATP-dependent chaperone ClpB [Escherichia coli B354]
Length = 861
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 225 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 525 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E++IRIDM
Sbjct: 579 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 818
Query: 673 R 673
R
Sbjct: 819 R 819
>gi|311278478|ref|YP_003940709.1| ATP-dependent chaperone ClpB [Enterobacter cloacae SCF1]
gi|308747673|gb|ADO47425.1| ATP-dependent chaperone ClpB [Enterobacter cloacae SCF1]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/661 (60%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKGRRVLSLDMGSLVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+KRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASRKRLDMLNEELDDKERQYSALEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSHSFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|432466777|ref|ZP_19708864.1| chaperone ClpB [Escherichia coli KTE205]
gi|432582290|ref|ZP_19818703.1| chaperone ClpB [Escherichia coli KTE57]
gi|433073818|ref|ZP_20260468.1| chaperone ClpB [Escherichia coli KTE129]
gi|433121149|ref|ZP_20306817.1| chaperone ClpB [Escherichia coli KTE157]
gi|433184293|ref|ZP_20368537.1| chaperone ClpB [Escherichia coli KTE85]
gi|430993060|gb|ELD09419.1| chaperone ClpB [Escherichia coli KTE205]
gi|431121701|gb|ELE24580.1| chaperone ClpB [Escherichia coli KTE57]
gi|431586710|gb|ELI58097.1| chaperone ClpB [Escherichia coli KTE129]
gi|431641475|gb|ELJ09213.1| chaperone ClpB [Escherichia coli KTE157]
gi|431705027|gb|ELJ69647.1| chaperone ClpB [Escherichia coli KTE85]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 535/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V++ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLDVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|419244574|ref|ZP_13787210.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
gi|378089111|gb|EHW50958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|170765528|ref|ZP_02900339.1| ATP-dependent chaperone protein ClpB [Escherichia albertii TW07627]
gi|170124674|gb|EDS93605.1| ATP-dependent chaperone protein ClpB [Escherichia albertii TW07627]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E++IRIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMIRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|330012953|ref|ZP_08307535.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. MS 92-3]
gi|419764286|ref|ZP_14290526.1| ATP-dependent chaperone protein ClpB [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|328533637|gb|EGF60348.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. MS 92-3]
gi|397742869|gb|EJK90087.1| ATP-dependent chaperone protein ClpB [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 861
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 219 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELADKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 459 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L
Sbjct: 519 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQELHH 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 573 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQN 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S ALK +S G+
Sbjct: 753 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDEALKLLSANGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|213424878|ref|ZP_03357628.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|417424063|ref|ZP_12160358.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353617828|gb|EHC68696.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
Length = 798
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 96 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 155
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 156 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 215
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 216 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 275
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 276 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 335
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 336 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 395
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 396 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 455
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L
Sbjct: 456 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHS 509
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 510 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 569
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 570 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 629
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 630 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 689
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 690 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 749
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 750 DPVYGAR 756
>gi|152971442|ref|YP_001336551.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|386036065|ref|YP_005955978.1| protein disaggregation chaperone [Klebsiella pneumoniae KCTC 2242]
gi|419972349|ref|ZP_14487777.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980701|ref|ZP_14495983.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419983727|ref|ZP_14498877.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991779|ref|ZP_14506742.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997789|ref|ZP_14512583.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420000915|ref|ZP_14515572.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010860|ref|ZP_14525327.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013477|ref|ZP_14527787.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022400|ref|ZP_14536569.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420028218|ref|ZP_14542200.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420030071|ref|ZP_14543899.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420035798|ref|ZP_14549461.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420045302|ref|ZP_14558771.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420047908|ref|ZP_14561223.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420052980|ref|ZP_14566159.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061850|ref|ZP_14574832.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420068245|ref|ZP_14581027.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420071034|ref|ZP_14583683.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420075822|ref|ZP_14588297.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420081380|ref|ZP_14593689.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421912823|ref|ZP_16342531.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421916255|ref|ZP_16345837.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424831907|ref|ZP_18256635.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424932241|ref|ZP_18350613.1| Protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425075406|ref|ZP_18478509.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425082745|ref|ZP_18485842.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425086042|ref|ZP_18489135.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425092829|ref|ZP_18495913.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428151942|ref|ZP_18999645.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428936035|ref|ZP_19009472.1| protein disaggregation chaperone [Klebsiella pneumoniae JHCK1]
gi|428942574|ref|ZP_19015558.1| protein disaggregation chaperone [Klebsiella pneumoniae VA360]
gi|449059107|ref|ZP_21736868.1| protein disaggregation chaperone [Klebsiella pneumoniae hvKP1]
gi|150956291|gb|ABR78321.1| ATP-dependent protease, Hsp 100 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|339763193|gb|AEJ99413.1| protein disaggregation chaperone [Klebsiella pneumoniae KCTC 2242]
gi|397344921|gb|EJJ38049.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397350758|gb|EJJ43844.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397355359|gb|EJJ48369.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397362187|gb|EJJ54841.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397363043|gb|EJJ55687.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397372440|gb|EJJ64924.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397377610|gb|EJJ69837.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397379560|gb|EJJ71751.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397384640|gb|EJJ76753.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397392066|gb|EJJ83880.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397402530|gb|EJJ94133.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397407815|gb|EJJ99200.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397409878|gb|EJK01175.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397415852|gb|EJK07031.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397424397|gb|EJK15295.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397426653|gb|EJK17461.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397429599|gb|EJK20309.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397441120|gb|EJK31508.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397448321|gb|EJK38500.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397453389|gb|EJK43450.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|405594595|gb|EKB68005.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405600997|gb|EKB74162.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405605974|gb|EKB78974.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405611171|gb|EKB83939.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|407806428|gb|EKF77679.1| Protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410113258|emb|CCM85156.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410121488|emb|CCM88462.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414709345|emb|CCN31049.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426298379|gb|EKV60788.1| protein disaggregation chaperone [Klebsiella pneumoniae VA360]
gi|426299164|gb|EKV61518.1| protein disaggregation chaperone [Klebsiella pneumoniae JHCK1]
gi|427538084|emb|CCM95783.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448875203|gb|EMB10228.1| protein disaggregation chaperone [Klebsiella pneumoniae hvKP1]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQELHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|300825131|ref|ZP_07105224.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 119-7]
gi|300522403|gb|EFK43472.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 119-7]
Length = 861
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 225 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKEHQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 525 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 579 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 818
Query: 673 R 673
R
Sbjct: 819 R 819
>gi|222157291|ref|YP_002557430.1| chaperone clpB [Escherichia coli LF82]
gi|222034296|emb|CAP77037.1| chaperone clpB [Escherichia coli LF82]
Length = 823
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 127 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 187 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 247 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 307 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 367 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 427 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 487 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E++IRIDM
Sbjct: 541 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMIRIDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 721 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|15832709|ref|NP_311482.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
Sakai]
gi|16130513|ref|NP_417083.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. MG1655]
gi|74313151|ref|YP_311570.1| protein disaggregation chaperone [Shigella sonnei Ss046]
gi|82545045|ref|YP_408992.1| protein disaggregation chaperone [Shigella boydii Sb227]
gi|110642755|ref|YP_670485.1| protein disaggregation chaperone [Escherichia coli 536]
gi|157158232|ref|YP_001463913.1| protein disaggregation chaperone [Escherichia coli E24377A]
gi|157162068|ref|YP_001459386.1| protein disaggregation chaperone [Escherichia coli HS]
gi|168752067|ref|ZP_02777089.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4113]
gi|168758662|ref|ZP_02783669.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4401]
gi|168762385|ref|ZP_02787392.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4501]
gi|168771698|ref|ZP_02796705.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4486]
gi|168773480|ref|ZP_02798487.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4196]
gi|168778570|ref|ZP_02803577.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4076]
gi|168789495|ref|ZP_02814502.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC869]
gi|168801710|ref|ZP_02826717.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC508]
gi|170019129|ref|YP_001724083.1| protein disaggregation chaperone [Escherichia coli ATCC 8739]
gi|170082197|ref|YP_001731517.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. DH10B]
gi|170683980|ref|YP_001744777.1| protein disaggregation chaperone [Escherichia coli SMS-3-5]
gi|188492624|ref|ZP_02999894.1| ATP-dependent chaperone protein ClpB [Escherichia coli 53638]
gi|191169051|ref|ZP_03030814.1| ATP-dependent chaperone protein ClpB [Escherichia coli B7A]
gi|191174569|ref|ZP_03036064.1| ATP-dependent chaperone protein ClpB [Escherichia coli F11]
gi|193064051|ref|ZP_03045136.1| ATP-dependent chaperone protein ClpB [Escherichia coli E22]
gi|194430164|ref|ZP_03062665.1| ATP-dependent chaperone protein ClpB [Escherichia coli B171]
gi|194439334|ref|ZP_03071412.1| ATP-dependent chaperone protein ClpB [Escherichia coli 101-1]
gi|195940187|ref|ZP_03085569.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EC4024]
gi|208805997|ref|ZP_03248334.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4206]
gi|208813052|ref|ZP_03254381.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4045]
gi|208819305|ref|ZP_03259625.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4042]
gi|209397795|ref|YP_002272065.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EC4115]
gi|209920069|ref|YP_002294153.1| protein disaggregation chaperone [Escherichia coli SE11]
gi|215487931|ref|YP_002330362.1| protein disaggregation chaperone [Escherichia coli O127:H6 str.
E2348/69]
gi|217326744|ref|ZP_03442827.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str.
TW14588]
gi|218555172|ref|YP_002388085.1| protein disaggregation chaperone [Escherichia coli IAI1]
gi|218690711|ref|YP_002398923.1| protein disaggregation chaperone [Escherichia coli ED1a]
gi|218696217|ref|YP_002403884.1| protein disaggregation chaperone [Escherichia coli 55989]
gi|218701104|ref|YP_002408733.1| protein disaggregation chaperone [Escherichia coli IAI39]
gi|218706094|ref|YP_002413613.1| protein disaggregation chaperone [Escherichia coli UMN026]
gi|238901753|ref|YP_002927549.1| protein disaggregation chaperone [Escherichia coli BW2952]
gi|251785915|ref|YP_003000219.1| ClpB chaperone [Escherichia coli BL21(DE3)]
gi|253772512|ref|YP_003035343.1| protein disaggregation chaperone [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162563|ref|YP_003045671.1| protein disaggregation chaperone [Escherichia coli B str. REL606]
gi|254289324|ref|YP_003055072.1| protein disaggregation chaperone [Escherichia coli BL21(DE3)]
gi|254794540|ref|YP_003079377.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
TW14359]
gi|260845274|ref|YP_003223052.1| protein disaggregation chaperone ClpB [Escherichia coli O103:H2
str. 12009]
gi|260856682|ref|YP_003230573.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
11368]
gi|260869274|ref|YP_003235676.1| protein disaggregation chaperone ClpB [Escherichia coli O111:H-
str. 11128]
gi|261227477|ref|ZP_05941758.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255671|ref|ZP_05948204.1| protein disaggregation chaperone ClpB [Escherichia coli O157:H7
str. FRIK966]
gi|297516260|ref|ZP_06934646.1| protein disaggregation chaperone [Escherichia coli OP50]
gi|301024190|ref|ZP_07187897.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 196-1]
gi|306812488|ref|ZP_07446686.1| protein disaggregation chaperone [Escherichia coli NC101]
gi|307315094|ref|ZP_07594678.1| ATP-dependent chaperone ClpB [Escherichia coli W]
gi|312965507|ref|ZP_07779739.1| ATP-dependent chaperone ClpB [Escherichia coli 2362-75]
gi|331664159|ref|ZP_08365068.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA143]
gi|331669344|ref|ZP_08370190.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA271]
gi|331674036|ref|ZP_08374798.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA280]
gi|378711951|ref|YP_005276844.1| ATP-dependent chaperone ClpB [Escherichia coli KO11FL]
gi|383179715|ref|YP_005457720.1| protein disaggregation chaperone [Shigella sonnei 53G]
gi|386281657|ref|ZP_10059317.1| chaperone ClpB [Escherichia sp. 4_1_40B]
gi|386594643|ref|YP_006091043.1| ATP-dependent chaperone ClpB [Escherichia coli DH1]
gi|386609990|ref|YP_006125476.1| protein disaggregation chaperone [Escherichia coli W]
gi|386615294|ref|YP_006134960.1| ATP-dependent chaperone ClpB [Escherichia coli UMNK88]
gi|386620191|ref|YP_006139771.1| ClpB protein [Escherichia coli NA114]
gi|386625329|ref|YP_006145057.1| protein disaggregation chaperone [Escherichia coli O7:K1 str. CE10]
gi|386640115|ref|YP_006106913.1| ATP-dependent chaperone protein ClpB [Escherichia coli ABU 83972]
gi|386700465|ref|YP_006164302.1| protein disaggregation chaperone [Escherichia coli KO11FL]
gi|386705853|ref|YP_006169700.1| Chaperone protein clpB [Escherichia coli P12b]
gi|386710479|ref|YP_006174200.1| protein disaggregation chaperone [Escherichia coli W]
gi|387507957|ref|YP_006160213.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
RM12579]
gi|387608240|ref|YP_006097096.1| chaperone (heat-shock protein F84.1) [Escherichia coli 042]
gi|387613238|ref|YP_006116354.1| chaperone (heat-shock protein F84.1) [Escherichia coli ETEC H10407]
gi|387622288|ref|YP_006129916.1| heat shock protein [Escherichia coli DH1]
gi|387830483|ref|YP_003350420.1| ATP-dependent protease [Escherichia coli SE15]
gi|388478624|ref|YP_490816.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. W3110]
gi|404375936|ref|ZP_10981112.1| chaperone ClpB [Escherichia sp. 1_1_43]
gi|407470487|ref|YP_006783070.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407480851|ref|YP_006778000.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2011C-3493]
gi|410481417|ref|YP_006768963.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414577322|ref|ZP_11434499.1| ATP-dependent chaperone ClpB [Shigella sonnei 3233-85]
gi|415778701|ref|ZP_11489695.1| ATP-dependent chaperone ClpB [Escherichia coli 3431]
gi|415784644|ref|ZP_11492465.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa14]
gi|415822347|ref|ZP_11510975.1| ATP-dependent chaperone ClpB [Escherichia coli OK1180]
gi|415828630|ref|ZP_11515128.1| ATP-dependent chaperone ClpB [Escherichia coli OK1357]
gi|416260475|ref|ZP_11640263.1| ClpB protein [Shigella dysenteriae CDC 74-1112]
gi|416279141|ref|ZP_11644813.1| ClpB protein [Shigella boydii ATCC 9905]
gi|416299381|ref|ZP_11652348.1| ClpB protein [Shigella flexneri CDC 796-83]
gi|416307900|ref|ZP_11654808.1| ClpB protein [Escherichia coli O157:H7 str. 1044]
gi|416321751|ref|ZP_11663599.1| ClpB protein [Escherichia coli O157:H7 str. EC1212]
gi|416326811|ref|ZP_11666923.1| ClpB protein [Escherichia coli O157:H7 str. 1125]
gi|416336625|ref|ZP_11673095.1| ClpB protein [Escherichia coli WV_060327]
gi|416345929|ref|ZP_11679302.1| ClpB protein [Escherichia coli EC4100B]
gi|416776084|ref|ZP_11874696.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
G5101]
gi|416787728|ref|ZP_11879610.1| protein disaggregation chaperone [Escherichia coli O157:H- str.
493-89]
gi|416799412|ref|ZP_11884525.1| protein disaggregation chaperone [Escherichia coli O157:H- str. H
2687]
gi|416809743|ref|ZP_11889208.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
3256-97]
gi|416820392|ref|ZP_11893767.1| protein disaggregation chaperone [Escherichia coli O55:H7 str. USDA
5905]
gi|416831290|ref|ZP_11899055.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
LSU-61]
gi|416898784|ref|ZP_11928330.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_7v]
gi|417115524|ref|ZP_11966660.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2741]
gi|417122593|ref|ZP_11971851.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0246]
gi|417135528|ref|ZP_11980313.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0588]
gi|417150815|ref|ZP_11990554.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2264]
gi|417154595|ref|ZP_11992724.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0497]
gi|417166450|ref|ZP_11999806.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0741]
gi|417174839|ref|ZP_12004635.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2608]
gi|417184955|ref|ZP_12010451.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0624]
gi|417188936|ref|ZP_12012494.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0522]
gi|417214357|ref|ZP_12022904.1| ATP-dependent chaperone protein ClpB [Escherichia coli JB1-95]
gi|417222149|ref|ZP_12025589.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.154]
gi|417231520|ref|ZP_12032918.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0959]
gi|417251352|ref|ZP_12043117.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0967]
gi|417262165|ref|ZP_12049645.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.3916]
gi|417268814|ref|ZP_12056174.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.3884]
gi|417272803|ref|ZP_12060152.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.4168]
gi|417292279|ref|ZP_12079560.1| ATP-dependent chaperone protein ClpB [Escherichia coli B41]
gi|417299788|ref|ZP_12087015.1| ATP-dependent chaperone protein ClpB [Escherichia coli 900105
(10e)]
gi|417587600|ref|ZP_12238367.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_C165-02]
gi|417592929|ref|ZP_12243624.1| ATP-dependent chaperone ClpB [Escherichia coli 2534-86]
gi|417597900|ref|ZP_12248535.1| ATP-dependent chaperone ClpB [Escherichia coli 3030-1]
gi|417603264|ref|ZP_12253832.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_94C]
gi|417609221|ref|ZP_12259723.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_DG131-3]
gi|417614061|ref|ZP_12264518.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_EH250]
gi|417619179|ref|ZP_12269592.1| ATP-dependent chaperone ClpB [Escherichia coli G58-1]
gi|417631236|ref|ZP_12281469.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_MHI813]
gi|417635568|ref|ZP_12285779.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_S1191]
gi|417640347|ref|ZP_12290487.1| ATP-dependent chaperone ClpB [Escherichia coli TX1999]
gi|417663139|ref|ZP_12312720.1| ClpB protein [Escherichia coli AA86]
gi|417667996|ref|ZP_12317540.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_O31]
gi|417713893|ref|ZP_12362856.1| ATP-dependent chaperone ClpB [Shigella flexneri K-272]
gi|417718518|ref|ZP_12367412.1| ATP-dependent chaperone ClpB [Shigella flexneri K-227]
gi|417806140|ref|ZP_12453086.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
LB226692]
gi|417833888|ref|ZP_12480335.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
01-09591]
gi|417943982|ref|ZP_12587227.1| protein disaggregation chaperone [Escherichia coli XH140A]
gi|417978062|ref|ZP_12618836.1| protein disaggregation chaperone [Escherichia coli XH001]
gi|418267386|ref|ZP_12886607.1| ATP-dependent chaperone ClpB [Shigella sonnei str. Moseley]
gi|418304087|ref|ZP_12915881.1| ATP-dependent chaperone ClpB [Escherichia coli UMNF18]
gi|418944161|ref|ZP_13497263.1| protein disaggregation chaperone [Escherichia coli O157:H43 str.
T22]
gi|418957031|ref|ZP_13508956.1| ATP-dependent chaperone protein ClpB [Escherichia coli J53]
gi|418998025|ref|ZP_13545616.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1A]
gi|419003146|ref|ZP_13550669.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1B]
gi|419008833|ref|ZP_13556262.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1C]
gi|419014504|ref|ZP_13561851.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1D]
gi|419025019|ref|ZP_13572244.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2A]
gi|419030056|ref|ZP_13577216.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2C]
gi|419040762|ref|ZP_13587786.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2E]
gi|419045837|ref|ZP_13592780.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3A]
gi|419048721|ref|ZP_13595643.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3B]
gi|419056229|ref|ZP_13603069.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3C]
gi|419065813|ref|ZP_13612510.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3D]
gi|419070710|ref|ZP_13616330.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3E]
gi|419074940|ref|ZP_13620486.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3F]
gi|419081790|ref|ZP_13627237.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4A]
gi|419085877|ref|ZP_13631255.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4B]
gi|419094680|ref|ZP_13639956.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4C]
gi|419099393|ref|ZP_13644589.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4D]
gi|419105595|ref|ZP_13650721.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4E]
gi|419112772|ref|ZP_13657812.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4F]
gi|419121670|ref|ZP_13666618.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5B]
gi|419127131|ref|ZP_13672012.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5C]
gi|419132616|ref|ZP_13677451.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5D]
gi|419137752|ref|ZP_13682543.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5E]
gi|419143546|ref|ZP_13688283.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6A]
gi|419149752|ref|ZP_13694404.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6B]
gi|419155000|ref|ZP_13699560.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6C]
gi|419160287|ref|ZP_13704791.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6D]
gi|419171261|ref|ZP_13715147.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7A]
gi|419175974|ref|ZP_13719790.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7B]
gi|419181894|ref|ZP_13725506.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7C]
gi|419187344|ref|ZP_13730855.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7D]
gi|419200632|ref|ZP_13743898.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8A]
gi|419203059|ref|ZP_13746263.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8B]
gi|419210823|ref|ZP_13753899.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8C]
gi|419219050|ref|ZP_13762016.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8E]
gi|419233674|ref|ZP_13776447.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9B]
gi|419238960|ref|ZP_13781674.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9C]
gi|419250237|ref|ZP_13792815.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9E]
gi|419256078|ref|ZP_13798590.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10A]
gi|419262386|ref|ZP_13804799.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10B]
gi|419273828|ref|ZP_13816122.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10D]
gi|419278381|ref|ZP_13820632.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10E]
gi|419285292|ref|ZP_13827462.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10F]
gi|419290582|ref|ZP_13832671.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11A]
gi|419295915|ref|ZP_13837958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11B]
gi|419307494|ref|ZP_13849392.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11D]
gi|419312508|ref|ZP_13854369.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11E]
gi|419317886|ref|ZP_13859688.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12A]
gi|419324074|ref|ZP_13865766.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12B]
gi|419330102|ref|ZP_13871703.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12C]
gi|419335677|ref|ZP_13877199.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12D]
gi|419341032|ref|ZP_13882495.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12E]
gi|419346241|ref|ZP_13887613.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13A]
gi|419371080|ref|ZP_13912196.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14A]
gi|419376528|ref|ZP_13917551.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14B]
gi|419381863|ref|ZP_13922812.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14C]
gi|419387210|ref|ZP_13928085.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14D]
gi|419392708|ref|ZP_13933514.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15A]
gi|419397694|ref|ZP_13938462.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15B]
gi|419408266|ref|ZP_13948952.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15D]
gi|419413747|ref|ZP_13954398.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15E]
gi|419701433|ref|ZP_14229033.1| protein disaggregation chaperone [Escherichia coli SCI-07]
gi|419806263|ref|ZP_14331376.1| protein disaggregation chaperone [Escherichia coli AI27]
gi|419865985|ref|ZP_14388357.1| protein disaggregation chaperone [Escherichia coli O103:H25 str.
CVM9340]
gi|419872055|ref|ZP_14394099.1| protein disaggregation chaperone [Escherichia coli O103:H2 str.
CVM9450]
gi|419878481|ref|ZP_14399948.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9534]
gi|419880948|ref|ZP_14402308.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9545]
gi|419887812|ref|ZP_14408365.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9570]
gi|419897690|ref|ZP_14417271.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9574]
gi|419904021|ref|ZP_14423031.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9942]
gi|419906107|ref|ZP_14425039.1| heat shock protein [Escherichia coli O26:H11 str. CVM10026]
gi|419921252|ref|ZP_14439309.1| protein disaggregation chaperone [Escherichia coli 541-15]
gi|419934375|ref|ZP_14451489.1| protein disaggregation chaperone [Escherichia coli 576-1]
gi|419939900|ref|ZP_14456683.1| protein disaggregation chaperone [Escherichia coli 75]
gi|419948570|ref|ZP_14464864.1| protein disaggregation chaperone [Escherichia coli CUMT8]
gi|420091280|ref|ZP_14603031.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9602]
gi|420093021|ref|ZP_14604709.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9634]
gi|420103377|ref|ZP_14614257.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9455]
gi|420110872|ref|ZP_14620772.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9553]
gi|420116853|ref|ZP_14626228.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10021]
gi|420124515|ref|ZP_14633366.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10030]
gi|420128968|ref|ZP_14637514.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10224]
gi|420135381|ref|ZP_14643468.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9952]
gi|420270857|ref|ZP_14773214.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA22]
gi|420276604|ref|ZP_14778887.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA40]
gi|420281787|ref|ZP_14784022.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW06591]
gi|420289382|ref|ZP_14791562.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10246]
gi|420290345|ref|ZP_14792512.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW11039]
gi|420299471|ref|ZP_14801520.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09109]
gi|420305417|ref|ZP_14807410.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10119]
gi|420312633|ref|ZP_14814551.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1738]
gi|420316427|ref|ZP_14818301.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1734]
gi|420386648|ref|ZP_14885996.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa12]
gi|421778297|ref|ZP_16214875.1| protein disaggregation chaperone [Escherichia coli AD30]
gi|421813585|ref|ZP_16249302.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0416]
gi|421819401|ref|ZP_16254896.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0821]
gi|421825399|ref|ZP_16260756.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK920]
gi|421831559|ref|ZP_16266849.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA7]
gi|422760079|ref|ZP_16813839.1| ATP-dependent chaperone ClpB [Escherichia coli E1167]
gi|422767878|ref|ZP_16821604.1| ATP-dependent chaperone ClpB [Escherichia coli E1520]
gi|422771505|ref|ZP_16825195.1| ATP-dependent chaperone ClpB [Escherichia coli E482]
gi|422776207|ref|ZP_16829862.1| ATP-dependent chaperone ClpB [Escherichia coli H120]
gi|422787849|ref|ZP_16840587.1| ATP-dependent chaperone ClpB [Escherichia coli H489]
gi|422803517|ref|ZP_16852003.1| ATP-dependent chaperone ClpB [Escherichia coli M863]
gi|422819253|ref|ZP_16867464.1| chaperone ClpB [Escherichia coli M919]
gi|422832204|ref|ZP_16880320.1| chaperone ClpB [Escherichia coli B093]
gi|422836955|ref|ZP_16884987.1| chaperone ClpB [Escherichia coli E101]
gi|422962607|ref|ZP_16972880.1| chaperone ClpB [Escherichia coli H494]
gi|422988714|ref|ZP_16979487.1| chaperone ClpB [Escherichia coli O104:H4 str. C227-11]
gi|422995606|ref|ZP_16986370.1| chaperone ClpB [Escherichia coli O104:H4 str. C236-11]
gi|423000751|ref|ZP_16991505.1| chaperone ClpB [Escherichia coli O104:H4 str. 09-7901]
gi|423004423|ref|ZP_16995169.1| chaperone ClpB [Escherichia coli O104:H4 str. 04-8351]
gi|423010923|ref|ZP_17001657.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-3677]
gi|423020151|ref|ZP_17010860.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4404]
gi|423025317|ref|ZP_17016014.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4522]
gi|423031138|ref|ZP_17021825.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4623]
gi|423038963|ref|ZP_17029637.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423044083|ref|ZP_17034750.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045811|ref|ZP_17036471.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423054350|ref|ZP_17043157.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423061325|ref|ZP_17050121.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423704031|ref|ZP_17678456.1| chaperone ClpB [Escherichia coli H730]
gi|423706710|ref|ZP_17681093.1| chaperone ClpB [Escherichia coli B799]
gi|423726319|ref|ZP_17700374.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA31]
gi|424078689|ref|ZP_17815677.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA505]
gi|424085155|ref|ZP_17821656.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA517]
gi|424091567|ref|ZP_17827508.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1996]
gi|424098188|ref|ZP_17833506.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1985]
gi|424104420|ref|ZP_17839198.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1990]
gi|424111092|ref|ZP_17845334.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93-001]
gi|424117029|ref|ZP_17850875.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA3]
gi|424123211|ref|ZP_17856539.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA5]
gi|424129376|ref|ZP_17862289.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA9]
gi|424135648|ref|ZP_17868118.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA10]
gi|424142216|ref|ZP_17874109.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA14]
gi|424148643|ref|ZP_17880025.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA15]
gi|424154459|ref|ZP_17885421.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA24]
gi|424251186|ref|ZP_17890985.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA25]
gi|424329347|ref|ZP_17896896.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA28]
gi|424450894|ref|ZP_17902607.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA32]
gi|424457097|ref|ZP_17908240.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA33]
gi|424463535|ref|ZP_17913979.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA39]
gi|424469873|ref|ZP_17919703.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA41]
gi|424476396|ref|ZP_17925719.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA42]
gi|424482151|ref|ZP_17931138.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07945]
gi|424488309|ref|ZP_17936884.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09098]
gi|424494886|ref|ZP_17942609.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09195]
gi|424501680|ref|ZP_17948582.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4203]
gi|424507926|ref|ZP_17954329.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4196]
gi|424515247|ref|ZP_17959938.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14313]
gi|424521466|ref|ZP_17965601.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14301]
gi|424527359|ref|ZP_17971082.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4421]
gi|424545659|ref|ZP_17988072.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4402]
gi|424551901|ref|ZP_17993766.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4439]
gi|424558086|ref|ZP_17999509.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4436]
gi|424564431|ref|ZP_18005439.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4437]
gi|424570565|ref|ZP_18011125.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4448]
gi|424576712|ref|ZP_18016793.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1845]
gi|424582550|ref|ZP_18022202.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1863]
gi|424751118|ref|ZP_18179160.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424761399|ref|ZP_18188980.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424773376|ref|ZP_18200438.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424815314|ref|ZP_18240465.1| protein disaggregation chaperone [Escherichia fergusonii ECD227]
gi|425100569|ref|ZP_18503290.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4870]
gi|425105317|ref|ZP_18507640.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.2239]
gi|425116070|ref|ZP_18517867.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0566]
gi|425120835|ref|ZP_18522528.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0569]
gi|425127258|ref|ZP_18528433.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0586]
gi|425132990|ref|ZP_18533845.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.2524]
gi|425139496|ref|ZP_18539883.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0833]
gi|425145289|ref|ZP_18545289.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0869]
gi|425151401|ref|ZP_18551020.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.0221]
gi|425163622|ref|ZP_18562514.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA506]
gi|425169365|ref|ZP_18567845.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA507]
gi|425181458|ref|ZP_18579160.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1999]
gi|425187724|ref|ZP_18585004.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1997]
gi|425194498|ref|ZP_18591273.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE1487]
gi|425207358|ref|ZP_18603162.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK2001]
gi|425213113|ref|ZP_18608520.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA4]
gi|425219234|ref|ZP_18614207.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA23]
gi|425225784|ref|ZP_18620257.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA49]
gi|425232047|ref|ZP_18626093.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA45]
gi|425237966|ref|ZP_18631691.1| ATP-dependent chaperone protein ClpB [Escherichia coli TT12B]
gi|425244183|ref|ZP_18637497.1| ATP-dependent chaperone protein ClpB [Escherichia coli MA6]
gi|425250353|ref|ZP_18643295.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5905]
gi|425256175|ref|ZP_18648701.1| ATP-dependent chaperone protein ClpB [Escherichia coli CB7326]
gi|425262430|ref|ZP_18654445.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC96038]
gi|425268429|ref|ZP_18660064.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5412]
gi|425273745|ref|ZP_18665153.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW15901]
gi|425284289|ref|ZP_18675324.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW00353]
gi|425295864|ref|ZP_18686073.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA38]
gi|425306330|ref|ZP_18696028.1| ATP-dependent chaperone protein ClpB [Escherichia coli N1]
gi|425312568|ref|ZP_18701759.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1735]
gi|425324632|ref|ZP_18713008.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1737]
gi|425330997|ref|ZP_18718860.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1846]
gi|425337173|ref|ZP_18724553.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1847]
gi|425343514|ref|ZP_18730411.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1848]
gi|425349324|ref|ZP_18735799.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1849]
gi|425355619|ref|ZP_18741692.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1850]
gi|425361583|ref|ZP_18747236.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1856]
gi|425367763|ref|ZP_18752931.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1862]
gi|425374112|ref|ZP_18758760.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1864]
gi|425380770|ref|ZP_18764785.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1865]
gi|425387002|ref|ZP_18770565.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1866]
gi|425395081|ref|ZP_18778175.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1868]
gi|425399791|ref|ZP_18782502.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1869]
gi|425405876|ref|ZP_18788105.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1870]
gi|425412267|ref|ZP_18794036.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE098]
gi|425418589|ref|ZP_18799865.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK523]
gi|425423439|ref|ZP_18804603.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1288]
gi|425429849|ref|ZP_18810467.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1304]
gi|427805771|ref|ZP_18972838.1| heat shock protein [Escherichia coli chi7122]
gi|427810267|ref|ZP_18977332.1| heat shock protein [Escherichia coli]
gi|428948274|ref|ZP_19020564.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1467]
gi|428954364|ref|ZP_19026171.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1042]
gi|428960336|ref|ZP_19031650.1| ATP-dependent chaperone protein ClpB [Escherichia coli 89.0511]
gi|428966954|ref|ZP_19037681.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0091]
gi|428972670|ref|ZP_19043017.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0039]
gi|428979173|ref|ZP_19049007.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.2281]
gi|428984924|ref|ZP_19054328.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0055]
gi|428991079|ref|ZP_19060077.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0056]
gi|428996949|ref|ZP_19065554.1| ATP-dependent chaperone protein ClpB [Escherichia coli 94.0618]
gi|429003194|ref|ZP_19071327.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0183]
gi|429009275|ref|ZP_19076800.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.1288]
gi|429021689|ref|ZP_19088221.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0428]
gi|429033930|ref|ZP_19099462.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0939]
gi|429039986|ref|ZP_19105104.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0932]
gi|429045892|ref|ZP_19110615.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0107]
gi|429051310|ref|ZP_19115880.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0003]
gi|429056686|ref|ZP_19121010.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.1742]
gi|429062187|ref|ZP_19126210.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0007]
gi|429068460|ref|ZP_19131935.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0672]
gi|429074406|ref|ZP_19137661.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0678]
gi|429079599|ref|ZP_19142738.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0713]
gi|429720179|ref|ZP_19255107.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772079|ref|ZP_19304100.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02030]
gi|429777024|ref|ZP_19309000.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785751|ref|ZP_19317647.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02092]
gi|429791641|ref|ZP_19323496.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02093]
gi|429792489|ref|ZP_19324339.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02281]
gi|429799065|ref|ZP_19330864.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02318]
gi|429807578|ref|ZP_19339303.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02913]
gi|429812478|ref|ZP_19344162.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03439]
gi|429818000|ref|ZP_19349638.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-04080]
gi|429823211|ref|ZP_19354806.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03943]
gi|429827622|ref|ZP_19358673.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0109]
gi|429833979|ref|ZP_19364338.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0010]
gi|429904586|ref|ZP_19370565.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908724|ref|ZP_19374688.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914596|ref|ZP_19380543.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919626|ref|ZP_19385557.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925446|ref|ZP_19391359.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929382|ref|ZP_19395284.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935921|ref|ZP_19401807.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941601|ref|ZP_19407475.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5603]
gi|429944282|ref|ZP_19410144.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951840|ref|ZP_19417686.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955189|ref|ZP_19421021.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0466]
gi|432354507|ref|ZP_19597777.1| chaperone ClpB [Escherichia coli KTE2]
gi|432370814|ref|ZP_19613897.1| chaperone ClpB [Escherichia coli KTE10]
gi|432377798|ref|ZP_19620787.1| chaperone ClpB [Escherichia coli KTE12]
gi|432382286|ref|ZP_19625228.1| chaperone ClpB [Escherichia coli KTE15]
gi|432388263|ref|ZP_19631146.1| chaperone ClpB [Escherichia coli KTE16]
gi|432389693|ref|ZP_19632563.1| chaperone ClpB [Escherichia coli KTE21]
gi|432398538|ref|ZP_19641317.1| chaperone ClpB [Escherichia coli KTE25]
gi|432402856|ref|ZP_19645607.1| chaperone ClpB [Escherichia coli KTE26]
gi|432407665|ref|ZP_19650372.1| chaperone ClpB [Escherichia coli KTE28]
gi|432412756|ref|ZP_19655417.1| chaperone ClpB [Escherichia coli KTE39]
gi|432418069|ref|ZP_19660667.1| chaperone ClpB [Escherichia coli KTE44]
gi|432422935|ref|ZP_19665478.1| chaperone ClpB [Escherichia coli KTE178]
gi|432427129|ref|ZP_19669624.1| chaperone ClpB [Escherichia coli KTE181]
gi|432437314|ref|ZP_19679702.1| chaperone ClpB [Escherichia coli KTE188]
gi|432442055|ref|ZP_19684394.1| chaperone ClpB [Escherichia coli KTE189]
gi|432447160|ref|ZP_19689459.1| chaperone ClpB [Escherichia coli KTE191]
gi|432450725|ref|ZP_19692987.1| chaperone ClpB [Escherichia coli KTE193]
gi|432457655|ref|ZP_19699836.1| chaperone ClpB [Escherichia coli KTE201]
gi|432461588|ref|ZP_19703734.1| chaperone ClpB [Escherichia coli KTE204]
gi|432471922|ref|ZP_19713964.1| chaperone ClpB [Escherichia coli KTE206]
gi|432476816|ref|ZP_19718811.1| chaperone ClpB [Escherichia coli KTE208]
gi|432486371|ref|ZP_19728285.1| chaperone ClpB [Escherichia coli KTE212]
gi|432490359|ref|ZP_19732227.1| chaperone ClpB [Escherichia coli KTE213]
gi|432496650|ref|ZP_19738446.1| chaperone ClpB [Escherichia coli KTE214]
gi|432501075|ref|ZP_19742831.1| chaperone ClpB [Escherichia coli KTE216]
gi|432505394|ref|ZP_19747116.1| chaperone ClpB [Escherichia coli KTE220]
gi|432514894|ref|ZP_19752116.1| chaperone ClpB [Escherichia coli KTE224]
gi|432518691|ref|ZP_19755876.1| chaperone ClpB [Escherichia coli KTE228]
gi|432524788|ref|ZP_19761914.1| chaperone ClpB [Escherichia coli KTE230]
gi|432527353|ref|ZP_19764443.1| chaperone ClpB [Escherichia coli KTE233]
gi|432534909|ref|ZP_19771880.1| chaperone ClpB [Escherichia coli KTE234]
gi|432538812|ref|ZP_19775712.1| chaperone ClpB [Escherichia coli KTE235]
gi|432544230|ref|ZP_19781071.1| chaperone ClpB [Escherichia coli KTE236]
gi|432549721|ref|ZP_19786486.1| chaperone ClpB [Escherichia coli KTE237]
gi|432554637|ref|ZP_19791357.1| chaperone ClpB [Escherichia coli KTE47]
gi|432559798|ref|ZP_19796466.1| chaperone ClpB [Escherichia coli KTE49]
gi|432564879|ref|ZP_19801458.1| chaperone ClpB [Escherichia coli KTE51]
gi|432569677|ref|ZP_19806186.1| chaperone ClpB [Escherichia coli KTE53]
gi|432576854|ref|ZP_19813309.1| chaperone ClpB [Escherichia coli KTE56]
gi|432593809|ref|ZP_19830123.1| chaperone ClpB [Escherichia coli KTE60]
gi|432603220|ref|ZP_19839463.1| chaperone ClpB [Escherichia coli KTE66]
gi|432608476|ref|ZP_19844660.1| chaperone ClpB [Escherichia coli KTE67]
gi|432612566|ref|ZP_19848726.1| chaperone ClpB [Escherichia coli KTE72]
gi|432617786|ref|ZP_19853897.1| chaperone ClpB [Escherichia coli KTE75]
gi|432622822|ref|ZP_19858849.1| chaperone ClpB [Escherichia coli KTE76]
gi|432628214|ref|ZP_19864189.1| chaperone ClpB [Escherichia coli KTE77]
gi|432632352|ref|ZP_19868276.1| chaperone ClpB [Escherichia coli KTE80]
gi|432637831|ref|ZP_19873699.1| chaperone ClpB [Escherichia coli KTE81]
gi|432642068|ref|ZP_19877899.1| chaperone ClpB [Escherichia coli KTE83]
gi|432647119|ref|ZP_19882907.1| chaperone ClpB [Escherichia coli KTE86]
gi|432652117|ref|ZP_19887869.1| chaperone ClpB [Escherichia coli KTE87]
gi|432656755|ref|ZP_19892457.1| chaperone ClpB [Escherichia coli KTE93]
gi|432661801|ref|ZP_19897441.1| chaperone ClpB [Escherichia coli KTE111]
gi|432667016|ref|ZP_19902595.1| chaperone ClpB [Escherichia coli KTE116]
gi|432671693|ref|ZP_19907221.1| chaperone ClpB [Escherichia coli KTE119]
gi|432675714|ref|ZP_19911170.1| chaperone ClpB [Escherichia coli KTE142]
gi|432681202|ref|ZP_19916574.1| chaperone ClpB [Escherichia coli KTE143]
gi|432686415|ref|ZP_19921709.1| chaperone ClpB [Escherichia coli KTE156]
gi|432687799|ref|ZP_19923081.1| chaperone ClpB [Escherichia coli KTE161]
gi|432695402|ref|ZP_19930599.1| chaperone ClpB [Escherichia coli KTE162]
gi|432700023|ref|ZP_19935175.1| chaperone ClpB [Escherichia coli KTE169]
gi|432705369|ref|ZP_19940468.1| chaperone ClpB [Escherichia coli KTE171]
gi|432706863|ref|ZP_19941944.1| chaperone ClpB [Escherichia coli KTE6]
gi|432714328|ref|ZP_19949363.1| chaperone ClpB [Escherichia coli KTE8]
gi|432719738|ref|ZP_19954705.1| chaperone ClpB [Escherichia coli KTE9]
gi|432724058|ref|ZP_19958975.1| chaperone ClpB [Escherichia coli KTE17]
gi|432728640|ref|ZP_19963517.1| chaperone ClpB [Escherichia coli KTE18]
gi|432733331|ref|ZP_19968159.1| chaperone ClpB [Escherichia coli KTE45]
gi|432738082|ref|ZP_19972837.1| chaperone ClpB [Escherichia coli KTE42]
gi|432742324|ref|ZP_19977042.1| chaperone ClpB [Escherichia coli KTE23]
gi|432746588|ref|ZP_19981252.1| chaperone ClpB [Escherichia coli KTE43]
gi|432751038|ref|ZP_19985639.1| chaperone ClpB [Escherichia coli KTE29]
gi|432760418|ref|ZP_19994910.1| chaperone ClpB [Escherichia coli KTE46]
gi|432765952|ref|ZP_20000384.1| chaperone ClpB [Escherichia coli KTE48]
gi|432771542|ref|ZP_20005867.1| chaperone ClpB [Escherichia coli KTE50]
gi|432775671|ref|ZP_20009939.1| chaperone ClpB [Escherichia coli KTE54]
gi|432784507|ref|ZP_20018686.1| chaperone ClpB [Escherichia coli KTE63]
gi|432793784|ref|ZP_20027867.1| chaperone ClpB [Escherichia coli KTE78]
gi|432795283|ref|ZP_20029345.1| chaperone ClpB [Escherichia coli KTE79]
gi|432806777|ref|ZP_20040697.1| chaperone ClpB [Escherichia coli KTE91]
gi|432810271|ref|ZP_20044150.1| chaperone ClpB [Escherichia coli KTE101]
gi|432816317|ref|ZP_20050099.1| chaperone ClpB [Escherichia coli KTE115]
gi|432828237|ref|ZP_20061859.1| chaperone ClpB [Escherichia coli KTE135]
gi|432835543|ref|ZP_20069080.1| chaperone ClpB [Escherichia coli KTE136]
gi|432840383|ref|ZP_20073847.1| chaperone ClpB [Escherichia coli KTE140]
gi|432852575|ref|ZP_20082291.1| chaperone ClpB [Escherichia coli KTE144]
gi|432863617|ref|ZP_20087499.1| chaperone ClpB [Escherichia coli KTE146]
gi|432869988|ref|ZP_20090520.1| chaperone ClpB [Escherichia coli KTE147]
gi|432876455|ref|ZP_20094373.1| chaperone ClpB [Escherichia coli KTE154]
gi|432887649|ref|ZP_20101620.1| chaperone ClpB [Escherichia coli KTE158]
gi|432905953|ref|ZP_20114717.1| chaperone ClpB [Escherichia coli KTE194]
gi|432913821|ref|ZP_20119441.1| chaperone ClpB [Escherichia coli KTE190]
gi|432920561|ref|ZP_20124196.1| chaperone ClpB [Escherichia coli KTE173]
gi|432928158|ref|ZP_20129411.1| chaperone ClpB [Escherichia coli KTE175]
gi|432935499|ref|ZP_20134840.1| chaperone ClpB [Escherichia coli KTE184]
gi|432938973|ref|ZP_20137175.1| chaperone ClpB [Escherichia coli KTE183]
gi|432948540|ref|ZP_20143591.1| chaperone ClpB [Escherichia coli KTE196]
gi|432956173|ref|ZP_20147961.1| chaperone ClpB [Escherichia coli KTE197]
gi|432962917|ref|ZP_20152387.1| chaperone ClpB [Escherichia coli KTE202]
gi|432968667|ref|ZP_20157581.1| chaperone ClpB [Escherichia coli KTE203]
gi|432972748|ref|ZP_20161613.1| chaperone ClpB [Escherichia coli KTE207]
gi|432974744|ref|ZP_20163580.1| chaperone ClpB [Escherichia coli KTE209]
gi|432981962|ref|ZP_20170736.1| chaperone ClpB [Escherichia coli KTE211]
gi|432986307|ref|ZP_20175027.1| chaperone ClpB [Escherichia coli KTE215]
gi|432991689|ref|ZP_20180353.1| chaperone ClpB [Escherichia coli KTE217]
gi|432996299|ref|ZP_20184884.1| chaperone ClpB [Escherichia coli KTE218]
gi|433000870|ref|ZP_20189393.1| chaperone ClpB [Escherichia coli KTE223]
gi|433014869|ref|ZP_20203210.1| chaperone ClpB [Escherichia coli KTE104]
gi|433019661|ref|ZP_20207852.1| chaperone ClpB [Escherichia coli KTE105]
gi|433024443|ref|ZP_20212423.1| chaperone ClpB [Escherichia coli KTE106]
gi|433034423|ref|ZP_20222130.1| chaperone ClpB [Escherichia coli KTE112]
gi|433039594|ref|ZP_20227191.1| chaperone ClpB [Escherichia coli KTE113]
gi|433044141|ref|ZP_20231634.1| chaperone ClpB [Escherichia coli KTE117]
gi|433049008|ref|ZP_20236353.1| chaperone ClpB [Escherichia coli KTE120]
gi|433054235|ref|ZP_20241407.1| chaperone ClpB [Escherichia coli KTE122]
gi|433059078|ref|ZP_20246119.1| chaperone ClpB [Escherichia coli KTE124]
gi|433064032|ref|ZP_20250948.1| chaperone ClpB [Escherichia coli KTE125]
gi|433068881|ref|ZP_20255665.1| chaperone ClpB [Escherichia coli KTE128]
gi|433078767|ref|ZP_20265293.1| chaperone ClpB [Escherichia coli KTE131]
gi|433083503|ref|ZP_20269958.1| chaperone ClpB [Escherichia coli KTE133]
gi|433088277|ref|ZP_20274645.1| chaperone ClpB [Escherichia coli KTE137]
gi|433092963|ref|ZP_20279226.1| chaperone ClpB [Escherichia coli KTE138]
gi|433097404|ref|ZP_20283586.1| chaperone ClpB [Escherichia coli KTE139]
gi|433102131|ref|ZP_20288209.1| chaperone ClpB [Escherichia coli KTE145]
gi|433106848|ref|ZP_20292819.1| chaperone ClpB [Escherichia coli KTE148]
gi|433111824|ref|ZP_20297684.1| chaperone ClpB [Escherichia coli KTE150]
gi|433116482|ref|ZP_20302270.1| chaperone ClpB [Escherichia coli KTE153]
gi|433126152|ref|ZP_20311706.1| chaperone ClpB [Escherichia coli KTE160]
gi|433131132|ref|ZP_20316565.1| chaperone ClpB [Escherichia coli KTE163]
gi|433135799|ref|ZP_20321139.1| chaperone ClpB [Escherichia coli KTE166]
gi|433140220|ref|ZP_20325472.1| chaperone ClpB [Escherichia coli KTE167]
gi|433145192|ref|ZP_20330332.1| chaperone ClpB [Escherichia coli KTE168]
gi|433150138|ref|ZP_20335154.1| chaperone ClpB [Escherichia coli KTE174]
gi|433159637|ref|ZP_20344470.1| chaperone ClpB [Escherichia coli KTE177]
gi|433174494|ref|ZP_20359012.1| chaperone ClpB [Escherichia coli KTE232]
gi|433179426|ref|ZP_20363819.1| chaperone ClpB [Escherichia coli KTE82]
gi|433189331|ref|ZP_20373426.1| chaperone ClpB [Escherichia coli KTE88]
gi|433194648|ref|ZP_20378632.1| chaperone ClpB [Escherichia coli KTE90]
gi|433199300|ref|ZP_20383194.1| chaperone ClpB [Escherichia coli KTE94]
gi|433204261|ref|ZP_20388026.1| chaperone ClpB [Escherichia coli KTE95]
gi|433213500|ref|ZP_20397089.1| chaperone ClpB [Escherichia coli KTE99]
gi|433323021|ref|ZP_20400391.1| protein disaggregation chaperone [Escherichia coli J96]
gi|433327005|ref|ZP_20403638.1| protein disaggregation chaperone [Escherichia coli J96]
gi|442590621|ref|ZP_21009382.1| ClpB protein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|442599575|ref|ZP_21017288.1| ClpB protein [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|442604746|ref|ZP_21019590.1| ClpB protein [Escherichia coli Nissle 1917]
gi|443618647|ref|YP_007382503.1| protein disaggregation chaperone [Escherichia coli APEC O78]
gi|444926153|ref|ZP_21245453.1| ATP-dependent chaperone protein ClpB [Escherichia coli 09BKT078844]
gi|444931860|ref|ZP_21250904.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0814]
gi|444937311|ref|ZP_21256091.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0815]
gi|444942940|ref|ZP_21261461.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0816]
gi|444948426|ref|ZP_21266740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0839]
gi|444953971|ref|ZP_21272070.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0848]
gi|444959494|ref|ZP_21277350.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1753]
gi|444964602|ref|ZP_21282213.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1775]
gi|444970627|ref|ZP_21287993.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1793]
gi|444975912|ref|ZP_21293039.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1805]
gi|444981297|ref|ZP_21298211.1| ATP-dependent chaperone protein ClpB [Escherichia coli ATCC 700728]
gi|444986692|ref|ZP_21303476.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA11]
gi|444992006|ref|ZP_21308652.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA19]
gi|444997317|ref|ZP_21313817.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA13]
gi|445002889|ref|ZP_21319281.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA2]
gi|445008328|ref|ZP_21324570.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA47]
gi|445013419|ref|ZP_21329529.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA48]
gi|445019288|ref|ZP_21335256.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA8]
gi|445024702|ref|ZP_21340529.1| ATP-dependent chaperone protein ClpB [Escherichia coli 7.1982]
gi|445030078|ref|ZP_21345756.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1781]
gi|445035545|ref|ZP_21351080.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1762]
gi|445041170|ref|ZP_21356546.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA35]
gi|445046399|ref|ZP_21361652.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4880]
gi|445051913|ref|ZP_21366962.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0083]
gi|445057684|ref|ZP_21372545.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0670]
gi|450220041|ref|ZP_21896286.1| protein disaggregation chaperone [Escherichia coli O08]
gi|450247072|ref|ZP_21901086.1| protein disaggregation chaperone [Escherichia coli S17]
gi|452967749|ref|ZP_21965976.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EC4009]
gi|54036848|sp|P63284.1|CLPB_ECOLI RecName: Full=Chaperone protein ClpB; AltName: Full=Heat shock
protein F84.1
gi|54036849|sp|P63285.1|CLPB_ECO57 RecName: Full=Chaperone protein ClpB
gi|54036850|sp|P63286.1|CLPB_ECOL6 RecName: Full=Chaperone protein ClpB
gi|1788943|gb|AAC75641.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. MG1655]
gi|1799995|dbj|BAA16476.1| protein disaggregation chaperone [Escherichia coli str. K12 substr.
W3110]
gi|13362926|dbj|BAB36878.1| heat shock protein [Escherichia coli O157:H7 str. Sakai]
gi|73856628|gb|AAZ89335.1| heat shock protein [Shigella sonnei Ss046]
gi|81246456|gb|ABB67164.1| heat shock protein [Shigella boydii Sb227]
gi|110344347|gb|ABG70584.1| ClpB protein [Escherichia coli 536]
gi|157067748|gb|ABV07003.1| ATP-dependent chaperone protein ClpB [Escherichia coli HS]
gi|157080262|gb|ABV19970.1| ATP-dependent chaperone protein ClpB [Escherichia coli E24377A]
gi|169754057|gb|ACA76756.1| ATP-dependent chaperone ClpB [Escherichia coli ATCC 8739]
gi|169890032|gb|ACB03739.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. DH10B]
gi|170521698|gb|ACB19876.1| ATP-dependent chaperone protein ClpB [Escherichia coli SMS-3-5]
gi|187770676|gb|EDU34520.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4196]
gi|188014008|gb|EDU52130.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4113]
gi|188487823|gb|EDU62926.1| ATP-dependent chaperone protein ClpB [Escherichia coli 53638]
gi|189003333|gb|EDU72319.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4076]
gi|189354548|gb|EDU72967.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4401]
gi|189359601|gb|EDU78020.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4486]
gi|189367288|gb|EDU85704.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4501]
gi|189370894|gb|EDU89310.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC869]
gi|189376181|gb|EDU94597.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC508]
gi|190900892|gb|EDV60678.1| ATP-dependent chaperone protein ClpB [Escherichia coli B7A]
gi|190905142|gb|EDV64786.1| ATP-dependent chaperone protein ClpB [Escherichia coli F11]
gi|192929286|gb|EDV82895.1| ATP-dependent chaperone protein ClpB [Escherichia coli E22]
gi|194411789|gb|EDX28110.1| ATP-dependent chaperone protein ClpB [Escherichia coli B171]
gi|194421696|gb|EDX37705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 101-1]
gi|208725798|gb|EDZ75399.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4206]
gi|208734329|gb|EDZ83016.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4045]
gi|208739428|gb|EDZ87110.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4042]
gi|209159195|gb|ACI36628.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4115]
gi|209913328|dbj|BAG78402.1| ATP-dependent protease [Escherichia coli SE11]
gi|215266003|emb|CAS10414.1| protein disaggregation chaperone [Escherichia coli O127:H6 str.
E2348/69]
gi|217319111|gb|EEC27536.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str.
TW14588]
gi|218352949|emb|CAU98748.1| protein disaggregation chaperone [Escherichia coli 55989]
gi|218361940|emb|CAQ99542.1| protein disaggregation chaperone [Escherichia coli IAI1]
gi|218371090|emb|CAR18919.1| protein disaggregation chaperone [Escherichia coli IAI39]
gi|218428275|emb|CAR09200.2| protein disaggregation chaperone [Escherichia coli ED1a]
gi|218433191|emb|CAR14090.1| protein disaggregation chaperone [Escherichia coli UMN026]
gi|238863301|gb|ACR65299.1| protein disaggregation chaperone [Escherichia coli BW2952]
gi|242378188|emb|CAQ32963.1| ClpB chaperone [Escherichia coli BL21(DE3)]
gi|253323556|gb|ACT28158.1| ATP-dependent chaperone ClpB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974464|gb|ACT40135.1| protein disaggregation chaperone [Escherichia coli B str. REL606]
gi|253978631|gb|ACT44301.1| protein disaggregation chaperone [Escherichia coli BL21(DE3)]
gi|254593940|gb|ACT73301.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
TW14359]
gi|257755331|dbj|BAI26833.1| protein disaggregation chaperone ClpB [Escherichia coli O26:H11
str. 11368]
gi|257760421|dbj|BAI31918.1| protein disaggregation chaperone ClpB [Escherichia coli O103:H2
str. 12009]
gi|257765630|dbj|BAI37125.1| protein disaggregation chaperone ClpB [Escherichia coli O111:H-
str. 11128]
gi|260448332|gb|ACX38754.1| ATP-dependent chaperone ClpB [Escherichia coli DH1]
gi|281179640|dbj|BAI55970.1| ATP-dependent protease [Escherichia coli SE15]
gi|284922540|emb|CBG35627.1| chaperone (heat-shock protein F84.1) [Escherichia coli 042]
gi|299880532|gb|EFI88743.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 196-1]
gi|305854526|gb|EFM54964.1| protein disaggregation chaperone [Escherichia coli NC101]
gi|306905523|gb|EFN36057.1| ATP-dependent chaperone ClpB [Escherichia coli W]
gi|307554607|gb|ADN47382.1| ATP-dependent chaperone protein ClpB [Escherichia coli ABU 83972]
gi|309702974|emb|CBJ02305.1| chaperone (heat-shock protein F84.1) [Escherichia coli ETEC H10407]
gi|312289927|gb|EFR17815.1| ATP-dependent chaperone ClpB [Escherichia coli 2362-75]
gi|315061907|gb|ADT76234.1| protein disaggregation chaperone [Escherichia coli W]
gi|315137212|dbj|BAJ44371.1| heat shock protein [Escherichia coli DH1]
gi|315615333|gb|EFU95967.1| ATP-dependent chaperone ClpB [Escherichia coli 3431]
gi|320177085|gb|EFW52102.1| ClpB protein [Shigella dysenteriae CDC 74-1112]
gi|320182491|gb|EFW57385.1| ClpB protein [Shigella boydii ATCC 9905]
gi|320185012|gb|EFW59794.1| ClpB protein [Shigella flexneri CDC 796-83]
gi|320188931|gb|EFW63590.1| ClpB protein [Escherichia coli O157:H7 str. EC1212]
gi|320194759|gb|EFW69388.1| ClpB protein [Escherichia coli WV_060327]
gi|320198369|gb|EFW72971.1| ClpB protein [Escherichia coli EC4100B]
gi|320640776|gb|EFX10274.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
G5101]
gi|320646121|gb|EFX15066.1| protein disaggregation chaperone [Escherichia coli O157:H- str.
493-89]
gi|320651418|gb|EFX19819.1| protein disaggregation chaperone [Escherichia coli O157:H- str. H
2687]
gi|320657023|gb|EFX24846.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320662687|gb|EFX30031.1| protein disaggregation chaperone [Escherichia coli O55:H7 str. USDA
5905]
gi|320667504|gb|EFX34428.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
LSU-61]
gi|323156248|gb|EFZ42407.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa14]
gi|323177280|gb|EFZ62868.1| ATP-dependent chaperone ClpB [Escherichia coli OK1180]
gi|323184531|gb|EFZ69905.1| ATP-dependent chaperone ClpB [Escherichia coli OK1357]
gi|323377512|gb|ADX49780.1| ATP-dependent chaperone ClpB [Escherichia coli KO11FL]
gi|323935612|gb|EGB31932.1| ATP-dependent chaperone ClpB [Escherichia coli E1520]
gi|323941388|gb|EGB37572.1| ATP-dependent chaperone ClpB [Escherichia coli E482]
gi|323946279|gb|EGB42312.1| ATP-dependent chaperone ClpB [Escherichia coli H120]
gi|323960548|gb|EGB56177.1| ATP-dependent chaperone ClpB [Escherichia coli H489]
gi|323963902|gb|EGB59395.1| ATP-dependent chaperone ClpB [Escherichia coli M863]
gi|324120051|gb|EGC13927.1| ATP-dependent chaperone ClpB [Escherichia coli E1167]
gi|325496334|gb|EGC94193.1| protein disaggregation chaperone [Escherichia fergusonii ECD227]
gi|326344348|gb|EGD68106.1| ClpB protein [Escherichia coli O157:H7 str. 1125]
gi|326347717|gb|EGD71434.1| ClpB protein [Escherichia coli O157:H7 str. 1044]
gi|327252298|gb|EGE63970.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_7v]
gi|330912357|gb|EGH40867.1| ClpB protein [Escherichia coli AA86]
gi|331058616|gb|EGI30594.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA143]
gi|331063012|gb|EGI34925.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA271]
gi|331068775|gb|EGI40168.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA280]
gi|332344463|gb|AEE57797.1| ATP-dependent chaperone ClpB [Escherichia coli UMNK88]
gi|333001158|gb|EGK20728.1| ATP-dependent chaperone ClpB [Shigella flexneri K-272]
gi|333015796|gb|EGK35133.1| ATP-dependent chaperone ClpB [Shigella flexneri K-227]
gi|333970692|gb|AEG37497.1| ClpB protein [Escherichia coli NA114]
gi|339416185|gb|AEJ57857.1| ATP-dependent chaperone ClpB [Escherichia coli UMNF18]
gi|340733532|gb|EGR62663.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
01-09591]
gi|340739435|gb|EGR73670.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
LB226692]
gi|342364116|gb|EGU28218.1| protein disaggregation chaperone [Escherichia coli XH140A]
gi|344192237|gb|EGV46333.1| protein disaggregation chaperone [Escherichia coli XH001]
gi|345334599|gb|EGW67041.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_C165-02]
gi|345337104|gb|EGW69537.1| ATP-dependent chaperone ClpB [Escherichia coli 2534-86]
gi|345349284|gb|EGW81571.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_94C]
gi|345352423|gb|EGW84672.1| ATP-dependent chaperone ClpB [Escherichia coli 3030-1]
gi|345357537|gb|EGW89731.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_DG131-3]
gi|345361095|gb|EGW93256.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_EH250]
gi|345369763|gb|EGX01744.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_MHI813]
gi|345374492|gb|EGX06443.1| ATP-dependent chaperone ClpB [Escherichia coli G58-1]
gi|345386438|gb|EGX16271.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_S1191]
gi|345392748|gb|EGX22527.1| ATP-dependent chaperone ClpB [Escherichia coli TX1999]
gi|349739066|gb|AEQ13772.1| protein disaggregation chaperone [Escherichia coli O7:K1 str. CE10]
gi|354862441|gb|EHF22879.1| chaperone ClpB [Escherichia coli O104:H4 str. C236-11]
gi|354867725|gb|EHF28147.1| chaperone ClpB [Escherichia coli O104:H4 str. C227-11]
gi|354868123|gb|EHF28541.1| chaperone ClpB [Escherichia coli O104:H4 str. 04-8351]
gi|354873722|gb|EHF34099.1| chaperone ClpB [Escherichia coli O104:H4 str. 09-7901]
gi|354880406|gb|EHF40742.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-3677]
gi|354888530|gb|EHF48786.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4404]
gi|354892691|gb|EHF52897.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4522]
gi|354893758|gb|EHF53957.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354896838|gb|EHF57005.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4623]
gi|354898532|gb|EHF58686.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354912300|gb|EHF72301.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354915256|gb|EHF75236.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354917144|gb|EHF77113.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C4]
gi|359332897|dbj|BAL39344.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. MDS42]
gi|371592087|gb|EHN81009.1| chaperone ClpB [Escherichia coli H494]
gi|371606808|gb|EHN95399.1| chaperone ClpB [Escherichia coli E101]
gi|371615394|gb|EHO03800.1| chaperone ClpB [Escherichia coli B093]
gi|374359951|gb|AEZ41658.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
RM12579]
gi|375320531|gb|EHS66474.1| protein disaggregation chaperone [Escherichia coli O157:H43 str.
T22]
gi|377842710|gb|EHU07760.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1A]
gi|377842992|gb|EHU08035.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1C]
gi|377846545|gb|EHU11556.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1B]
gi|377855963|gb|EHU20825.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1D]
gi|377862695|gb|EHU27503.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2A]
gi|377876581|gb|EHU41181.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2C]
gi|377889074|gb|EHU53541.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2E]
gi|377894379|gb|EHU58801.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3A]
gi|377903360|gb|EHU67656.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3B]
gi|377903368|gb|EHU67661.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3D]
gi|377910932|gb|EHU75115.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3C]
gi|377911230|gb|EHU75404.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3E]
gi|377924761|gb|EHU88702.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4A]
gi|377926892|gb|EHU90819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3F]
gi|377935034|gb|EHU98857.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4B]
gi|377938729|gb|EHV02494.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4C]
gi|377941241|gb|EHV04985.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4D]
gi|377946132|gb|EHV09819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4E]
gi|377952146|gb|EHV15747.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4F]
gi|377965090|gb|EHV28518.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5B]
gi|377973637|gb|EHV36974.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5C]
gi|377974765|gb|EHV38091.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5D]
gi|377982172|gb|EHV45424.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5E]
gi|377991404|gb|EHV54555.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6B]
gi|377993350|gb|EHV56487.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6A]
gi|377995518|gb|EHV58634.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6C]
gi|378006522|gb|EHV69500.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6D]
gi|378015305|gb|EHV78202.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7A]
gi|378022804|gb|EHV85487.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7C]
gi|378027627|gb|EHV90253.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7D]
gi|378031946|gb|EHV94528.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7B]
gi|378039355|gb|EHW01848.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8A]
gi|378052270|gb|EHW14579.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8C]
gi|378052552|gb|EHW14856.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8B]
gi|378074646|gb|EHW36679.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8E]
gi|378076171|gb|EHW38183.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9B]
gi|378083065|gb|EHW45001.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9C]
gi|378093516|gb|EHW55322.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9E]
gi|378099275|gb|EHW60983.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10A]
gi|378104890|gb|EHW66542.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10B]
gi|378115525|gb|EHW77064.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10D]
gi|378128356|gb|EHW89738.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11A]
gi|378129125|gb|EHW90501.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10E]
gi|378130260|gb|EHW91628.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10F]
gi|378140640|gb|EHX01863.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11B]
gi|378147456|gb|EHX08603.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11D]
gi|378157016|gb|EHX18060.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11E]
gi|378164351|gb|EHX25297.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12B]
gi|378168579|gb|EHX29483.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12A]
gi|378168939|gb|EHX29840.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12C]
gi|378180553|gb|EHX41234.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12D]
gi|378185028|gb|EHX45660.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13A]
gi|378187001|gb|EHX47621.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12E]
gi|378215991|gb|EHX76281.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14A]
gi|378218075|gb|EHX78347.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14B]
gi|378227090|gb|EHX87267.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14C]
gi|378230377|gb|EHX90496.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14D]
gi|378236556|gb|EHX96601.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15A]
gi|378243815|gb|EHY03761.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15B]
gi|378252827|gb|EHY12705.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15D]
gi|378258568|gb|EHY18385.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15E]
gi|380347350|gb|EIA35638.1| protein disaggregation chaperone [Escherichia coli SCI-07]
gi|383104021|gb|AFG41530.1| Chaperone protein clpB [Escherichia coli P12b]
gi|383391992|gb|AFH16950.1| protein disaggregation chaperone [Escherichia coli KO11FL]
gi|383406171|gb|AFH12414.1| protein disaggregation chaperone [Escherichia coli W]
gi|384380825|gb|EIE38691.1| ATP-dependent chaperone protein ClpB [Escherichia coli J53]
gi|384470764|gb|EIE54862.1| protein disaggregation chaperone [Escherichia coli AI27]
gi|385537254|gb|EIF84136.1| chaperone ClpB [Escherichia coli M919]
gi|385707147|gb|EIG44179.1| chaperone ClpB [Escherichia coli H730]
gi|385711187|gb|EIG48147.1| chaperone ClpB [Escherichia coli B799]
gi|386121213|gb|EIG69830.1| chaperone ClpB [Escherichia sp. 4_1_40B]
gi|386140943|gb|EIG82095.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2741]
gi|386147873|gb|EIG94313.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0246]
gi|386153382|gb|EIH04671.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0588]
gi|386160309|gb|EIH22120.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2264]
gi|386167684|gb|EIH34200.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0497]
gi|386171607|gb|EIH43646.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0741]
gi|386177531|gb|EIH55010.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2608]
gi|386183017|gb|EIH65768.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0624]
gi|386192481|gb|EIH81205.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0522]
gi|386194077|gb|EIH88338.1| ATP-dependent chaperone protein ClpB [Escherichia coli JB1-95]
gi|386201951|gb|EII00942.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.154]
gi|386204519|gb|EII09030.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0959]
gi|386218201|gb|EII34684.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0967]
gi|386224215|gb|EII46558.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.3916]
gi|386227619|gb|EII54975.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.3884]
gi|386236503|gb|EII68479.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.4168]
gi|386254601|gb|EIJ04291.1| ATP-dependent chaperone protein ClpB [Escherichia coli B41]
gi|386256623|gb|EIJ12117.1| ATP-dependent chaperone protein ClpB [Escherichia coli 900105
(10e)]
gi|388334874|gb|EIL01454.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9534]
gi|388335556|gb|EIL02116.1| protein disaggregation chaperone [Escherichia coli O103:H2 str.
CVM9450]
gi|388336442|gb|EIL02985.1| protein disaggregation chaperone [Escherichia coli O103:H25 str.
CVM9340]
gi|388354959|gb|EIL19831.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9574]
gi|388361811|gb|EIL25885.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9570]
gi|388366891|gb|EIL30600.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9545]
gi|388368482|gb|EIL32113.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9942]
gi|388379915|gb|EIL42545.1| heat shock protein [Escherichia coli O26:H11 str. CVM10026]
gi|388397947|gb|EIL58901.1| protein disaggregation chaperone [Escherichia coli 541-15]
gi|388406100|gb|EIL66511.1| protein disaggregation chaperone [Escherichia coli 75]
gi|388408493|gb|EIL68837.1| protein disaggregation chaperone [Escherichia coli 576-1]
gi|388421160|gb|EIL80781.1| protein disaggregation chaperone [Escherichia coli CUMT8]
gi|390640873|gb|EIN20317.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1996]
gi|390642395|gb|EIN21793.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA517]
gi|390643356|gb|EIN22710.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA505]
gi|390659773|gb|EIN37521.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93-001]
gi|390661066|gb|EIN38738.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1985]
gi|390662860|gb|EIN40396.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1990]
gi|390676582|gb|EIN52672.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA3]
gi|390679827|gb|EIN55693.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA5]
gi|390683118|gb|EIN58832.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA9]
gi|390695597|gb|EIN70116.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA10]
gi|390700139|gb|EIN74460.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA15]
gi|390700597|gb|EIN74890.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA14]
gi|390713745|gb|EIN86673.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA22]
gi|390721880|gb|EIN94573.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA25]
gi|390723387|gb|EIN95983.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA24]
gi|390726355|gb|EIN98805.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA28]
gi|390741481|gb|EIO12548.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA31]
gi|390741941|gb|EIO12968.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA32]
gi|390744542|gb|EIO15398.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA33]
gi|390757407|gb|EIO26891.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA40]
gi|390766404|gb|EIO35526.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA41]
gi|390767719|gb|EIO36786.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA39]
gi|390768138|gb|EIO37181.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA42]
gi|390780798|gb|EIO48492.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW06591]
gi|390786853|gb|EIO54355.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10246]
gi|390789740|gb|EIO57184.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07945]
gi|390802310|gb|EIO69351.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW11039]
gi|390804600|gb|EIO71558.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09098]
gi|390807166|gb|EIO74068.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09109]
gi|390815319|gb|EIO81854.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10119]
gi|390825299|gb|EIO91234.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4203]
gi|390829325|gb|EIO94927.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09195]
gi|390830191|gb|EIO95751.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4196]
gi|390845553|gb|EIP09187.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14301]
gi|390845736|gb|EIP09363.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14313]
gi|390850018|gb|EIP13414.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4421]
gi|390870013|gb|EIP31586.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4402]
gi|390877881|gb|EIP38772.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4439]
gi|390883127|gb|EIP43584.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4436]
gi|390892599|gb|EIP52174.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4437]
gi|390895117|gb|EIP54598.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4448]
gi|390897356|gb|EIP56691.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1738]
gi|390907430|gb|EIP66293.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1734]
gi|390918506|gb|EIP76903.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1863]
gi|390919698|gb|EIP78023.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1845]
gi|391283665|gb|EIQ42280.1| ATP-dependent chaperone ClpB [Shigella sonnei 3233-85]
gi|391304571|gb|EIQ62380.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa12]
gi|394383682|gb|EJE61272.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9602]
gi|394384190|gb|EJE61757.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10224]
gi|394399883|gb|EJE75853.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9634]
gi|394400710|gb|EJE76622.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9553]
gi|394402890|gb|EJE78574.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10021]
gi|394408132|gb|EJE82854.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9455]
gi|394414750|gb|EJE88672.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10030]
gi|394420119|gb|EJE93671.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9952]
gi|397784398|gb|EJK95252.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_O31]
gi|397898400|gb|EJL14784.1| ATP-dependent chaperone ClpB [Shigella sonnei str. Moseley]
gi|404290464|gb|EEH71314.2| chaperone ClpB [Escherichia sp. 1_1_43]
gi|406776579|gb|AFS56003.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407053148|gb|AFS73199.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2011C-3493]
gi|407066522|gb|AFS87569.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408065418|gb|EKG99892.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA7]
gi|408066055|gb|EKH00519.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK920]
gi|408078498|gb|EKH12650.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA506]
gi|408082392|gb|EKH16375.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA507]
gi|408096980|gb|EKH29894.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1999]
gi|408103486|gb|EKH35832.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1997]
gi|408108044|gb|EKH40082.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE1487]
gi|408120379|gb|EKH51376.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK2001]
gi|408126922|gb|EKH57449.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA4]
gi|408137165|gb|EKH66879.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA23]
gi|408139500|gb|EKH69110.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA49]
gi|408145583|gb|EKH74742.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA45]
gi|408154477|gb|EKH82818.1| ATP-dependent chaperone protein ClpB [Escherichia coli TT12B]
gi|408159346|gb|EKH87418.1| ATP-dependent chaperone protein ClpB [Escherichia coli MA6]
gi|408163120|gb|EKH91000.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5905]
gi|408172759|gb|EKH99813.1| ATP-dependent chaperone protein ClpB [Escherichia coli CB7326]
gi|408179519|gb|EKI06179.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC96038]
gi|408182301|gb|EKI08817.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5412]
gi|408192674|gb|EKI18244.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW15901]
gi|408201192|gb|EKI26354.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW00353]
gi|408217080|gb|EKI41366.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA38]
gi|408226599|gb|EKI50233.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1735]
gi|408227563|gb|EKI51146.1| ATP-dependent chaperone protein ClpB [Escherichia coli N1]
gi|408241828|gb|EKI64439.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1737]
gi|408246116|gb|EKI68425.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1846]
gi|408254867|gb|EKI76335.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1847]
gi|408258402|gb|EKI79668.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1848]
gi|408264914|gb|EKI85679.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1849]
gi|408273621|gb|EKI93673.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1850]
gi|408276539|gb|EKI96438.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1856]
gi|408285691|gb|EKJ04683.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1862]
gi|408290482|gb|EKJ09195.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1864]
gi|408295458|gb|EKJ13772.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1865]
gi|408303668|gb|EKJ21122.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1868]
gi|408307246|gb|EKJ24589.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1866]
gi|408318093|gb|EKJ34309.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1869]
gi|408324292|gb|EKJ40226.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1870]
gi|408325685|gb|EKJ41541.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE098]
gi|408335945|gb|EKJ50755.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK523]
gi|408342856|gb|EKJ57270.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1288]
gi|408345643|gb|EKJ59958.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1304]
gi|408456596|gb|EKJ80409.1| protein disaggregation chaperone [Escherichia coli AD30]
gi|408545467|gb|EKK22897.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4870]
gi|408549014|gb|EKK26382.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.2239]
gi|408567358|gb|EKK43417.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0566]
gi|408568063|gb|EKK44102.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0569]
gi|408568197|gb|EKK44234.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0586]
gi|408578176|gb|EKK53705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0833]
gi|408580682|gb|EKK56069.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.2524]
gi|408590902|gb|EKK65363.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0869]
gi|408595822|gb|EKK70028.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.0221]
gi|408600548|gb|EKK74389.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0416]
gi|408612015|gb|EKK85363.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0821]
gi|412963953|emb|CCK47879.1| heat shock protein [Escherichia coli chi7122]
gi|412970446|emb|CCJ45092.1| heat shock protein [Escherichia coli]
gi|421936383|gb|EKT94047.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421939968|gb|EKT97456.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421944373|gb|EKU01633.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427204151|gb|EKV74434.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1042]
gi|427206034|gb|EKV76261.1| ATP-dependent chaperone protein ClpB [Escherichia coli 89.0511]
gi|427208023|gb|EKV78176.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1467]
gi|427220326|gb|EKV89252.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0091]
gi|427223700|gb|EKV92431.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.2281]
gi|427227468|gb|EKV96019.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0039]
gi|427241215|gb|EKW08657.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0056]
gi|427241593|gb|EKW09019.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0055]
gi|427245213|gb|EKW12509.1| ATP-dependent chaperone protein ClpB [Escherichia coli 94.0618]
gi|427260080|gb|EKW26078.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0183]
gi|427264041|gb|EKW29740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.1288]
gi|427275876|gb|EKW40469.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0428]
gi|427282427|gb|EKW46677.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0939]
gi|427291326|gb|EKW54740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0932]
gi|427298443|gb|EKW61445.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0107]
gi|427299919|gb|EKW62880.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0003]
gi|427311752|gb|EKW73928.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.1742]
gi|427314740|gb|EKW76771.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0007]
gi|427319003|gb|EKW80837.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0672]
gi|427327344|gb|EKW88737.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0678]
gi|427328670|gb|EKW90028.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0713]
gi|429253084|gb|EKY37580.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0109]
gi|429254795|gb|EKY39162.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0010]
gi|429348329|gb|EKY85099.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02092]
gi|429359075|gb|EKY95741.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02030]
gi|429361406|gb|EKY98061.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02093]
gi|429361713|gb|EKY98366.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02033-1]
gi|429364353|gb|EKZ00973.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02318]
gi|429375202|gb|EKZ11740.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02913]
gi|429376359|gb|EKZ12888.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02281]
gi|429378668|gb|EKZ15176.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03439]
gi|429379532|gb|EKZ16032.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03943]
gi|429390667|gb|EKZ27076.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-04080]
gi|429406135|gb|EKZ42396.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9990]
gi|429409054|gb|EKZ45285.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413384|gb|EKZ49571.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4987]
gi|429416528|gb|EKZ52683.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4984]
gi|429420238|gb|EKZ56368.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4986]
gi|429428129|gb|EKZ64208.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5604]
gi|429431551|gb|EKZ67598.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436661|gb|EKZ72677.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437565|gb|EKZ73568.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-6006]
gi|429447235|gb|EKZ83159.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451488|gb|EKZ87379.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9941]
gi|429456748|gb|EKZ92592.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0466]
gi|430874323|gb|ELB97880.1| chaperone ClpB [Escherichia coli KTE2]
gi|430883700|gb|ELC06674.1| chaperone ClpB [Escherichia coli KTE10]
gi|430897818|gb|ELC20012.1| chaperone ClpB [Escherichia coli KTE12]
gi|430905160|gb|ELC26835.1| chaperone ClpB [Escherichia coli KTE16]
gi|430906999|gb|ELC28503.1| chaperone ClpB [Escherichia coli KTE15]
gi|430914786|gb|ELC35881.1| chaperone ClpB [Escherichia coli KTE25]
gi|430924187|gb|ELC44909.1| chaperone ClpB [Escherichia coli KTE21]
gi|430924628|gb|ELC45313.1| chaperone ClpB [Escherichia coli KTE26]
gi|430928806|gb|ELC49337.1| chaperone ClpB [Escherichia coli KTE28]
gi|430934408|gb|ELC54770.1| chaperone ClpB [Escherichia coli KTE39]
gi|430938174|gb|ELC58417.1| chaperone ClpB [Escherichia coli KTE44]
gi|430943395|gb|ELC63508.1| chaperone ClpB [Escherichia coli KTE178]
gi|430954358|gb|ELC73230.1| chaperone ClpB [Escherichia coli KTE181]
gi|430962645|gb|ELC80502.1| chaperone ClpB [Escherichia coli KTE188]
gi|430965485|gb|ELC82903.1| chaperone ClpB [Escherichia coli KTE189]
gi|430973433|gb|ELC90401.1| chaperone ClpB [Escherichia coli KTE191]
gi|430979217|gb|ELC96003.1| chaperone ClpB [Escherichia coli KTE193]
gi|430981147|gb|ELC97879.1| chaperone ClpB [Escherichia coli KTE201]
gi|430988061|gb|ELD04562.1| chaperone ClpB [Escherichia coli KTE204]
gi|430996977|gb|ELD13245.1| chaperone ClpB [Escherichia coli KTE206]
gi|431004123|gb|ELD19351.1| chaperone ClpB [Escherichia coli KTE208]
gi|431015033|gb|ELD28592.1| chaperone ClpB [Escherichia coli KTE212]
gi|431019262|gb|ELD32664.1| chaperone ClpB [Escherichia coli KTE213]
gi|431023908|gb|ELD37103.1| chaperone ClpB [Escherichia coli KTE214]
gi|431027660|gb|ELD40717.1| chaperone ClpB [Escherichia coli KTE216]
gi|431037409|gb|ELD48392.1| chaperone ClpB [Escherichia coli KTE220]
gi|431041280|gb|ELD51811.1| chaperone ClpB [Escherichia coli KTE224]
gi|431050018|gb|ELD59777.1| chaperone ClpB [Escherichia coli KTE228]
gi|431050645|gb|ELD60384.1| chaperone ClpB [Escherichia coli KTE230]
gi|431059324|gb|ELD68682.1| chaperone ClpB [Escherichia coli KTE234]
gi|431062621|gb|ELD71885.1| chaperone ClpB [Escherichia coli KTE233]
gi|431068692|gb|ELD77166.1| chaperone ClpB [Escherichia coli KTE235]
gi|431073596|gb|ELD81238.1| chaperone ClpB [Escherichia coli KTE236]
gi|431078889|gb|ELD85868.1| chaperone ClpB [Escherichia coli KTE237]
gi|431082715|gb|ELD89027.1| chaperone ClpB [Escherichia coli KTE47]
gi|431090181|gb|ELD95951.1| chaperone ClpB [Escherichia coli KTE49]
gi|431092570|gb|ELD98261.1| chaperone ClpB [Escherichia coli KTE51]
gi|431098769|gb|ELE04075.1| chaperone ClpB [Escherichia coli KTE53]
gi|431114090|gb|ELE17642.1| chaperone ClpB [Escherichia coli KTE56]
gi|431126882|gb|ELE29223.1| chaperone ClpB [Escherichia coli KTE60]
gi|431137420|gb|ELE39267.1| chaperone ClpB [Escherichia coli KTE67]
gi|431140270|gb|ELE42044.1| chaperone ClpB [Escherichia coli KTE66]
gi|431147630|gb|ELE48984.1| chaperone ClpB [Escherichia coli KTE72]
gi|431152924|gb|ELE53844.1| chaperone ClpB [Escherichia coli KTE75]
gi|431158219|gb|ELE58837.1| chaperone ClpB [Escherichia coli KTE76]
gi|431162309|gb|ELE62759.1| chaperone ClpB [Escherichia coli KTE77]
gi|431169228|gb|ELE69449.1| chaperone ClpB [Escherichia coli KTE80]
gi|431169930|gb|ELE70144.1| chaperone ClpB [Escherichia coli KTE81]
gi|431179497|gb|ELE79397.1| chaperone ClpB [Escherichia coli KTE86]
gi|431180932|gb|ELE80808.1| chaperone ClpB [Escherichia coli KTE83]
gi|431189556|gb|ELE88977.1| chaperone ClpB [Escherichia coli KTE87]
gi|431189973|gb|ELE89389.1| chaperone ClpB [Escherichia coli KTE93]
gi|431198760|gb|ELE97543.1| chaperone ClpB [Escherichia coli KTE111]
gi|431199842|gb|ELE98569.1| chaperone ClpB [Escherichia coli KTE116]
gi|431209975|gb|ELF08042.1| chaperone ClpB [Escherichia coli KTE119]
gi|431213521|gb|ELF11395.1| chaperone ClpB [Escherichia coli KTE142]
gi|431219520|gb|ELF16916.1| chaperone ClpB [Escherichia coli KTE143]
gi|431220903|gb|ELF18232.1| chaperone ClpB [Escherichia coli KTE156]
gi|431233024|gb|ELF28622.1| chaperone ClpB [Escherichia coli KTE162]
gi|431238051|gb|ELF32991.1| chaperone ClpB [Escherichia coli KTE161]
gi|431242251|gb|ELF36672.1| chaperone ClpB [Escherichia coli KTE171]
gi|431242452|gb|ELF36869.1| chaperone ClpB [Escherichia coli KTE169]
gi|431255423|gb|ELF48676.1| chaperone ClpB [Escherichia coli KTE8]
gi|431256994|gb|ELF49924.1| chaperone ClpB [Escherichia coli KTE6]
gi|431261505|gb|ELF53539.1| chaperone ClpB [Escherichia coli KTE9]
gi|431264650|gb|ELF56355.1| chaperone ClpB [Escherichia coli KTE17]
gi|431272401|gb|ELF63503.1| chaperone ClpB [Escherichia coli KTE18]
gi|431274084|gb|ELF65148.1| chaperone ClpB [Escherichia coli KTE45]
gi|431280926|gb|ELF71834.1| chaperone ClpB [Escherichia coli KTE42]
gi|431282813|gb|ELF73687.1| chaperone ClpB [Escherichia coli KTE23]
gi|431290737|gb|ELF81268.1| chaperone ClpB [Escherichia coli KTE43]
gi|431295668|gb|ELF85401.1| chaperone ClpB [Escherichia coli KTE29]
gi|431306883|gb|ELF95185.1| chaperone ClpB [Escherichia coli KTE46]
gi|431309349|gb|ELF97549.1| chaperone ClpB [Escherichia coli KTE48]
gi|431314008|gb|ELG01963.1| chaperone ClpB [Escherichia coli KTE50]
gi|431317134|gb|ELG04916.1| chaperone ClpB [Escherichia coli KTE54]
gi|431328930|gb|ELG16234.1| chaperone ClpB [Escherichia coli KTE63]
gi|431338743|gb|ELG25819.1| chaperone ClpB [Escherichia coli KTE78]
gi|431350931|gb|ELG37732.1| chaperone ClpB [Escherichia coli KTE79]
gi|431354165|gb|ELG40904.1| chaperone ClpB [Escherichia coli KTE91]
gi|431361324|gb|ELG47915.1| chaperone ClpB [Escherichia coli KTE101]
gi|431363452|gb|ELG50013.1| chaperone ClpB [Escherichia coli KTE115]
gi|431384371|gb|ELG68427.1| chaperone ClpB [Escherichia coli KTE135]
gi|431384440|gb|ELG68492.1| chaperone ClpB [Escherichia coli KTE136]
gi|431387893|gb|ELG71698.1| chaperone ClpB [Escherichia coli KTE140]
gi|431399103|gb|ELG82515.1| chaperone ClpB [Escherichia coli KTE144]
gi|431403787|gb|ELG87053.1| chaperone ClpB [Escherichia coli KTE146]
gi|431409810|gb|ELG92980.1| chaperone ClpB [Escherichia coli KTE147]
gi|431415458|gb|ELG98000.1| chaperone ClpB [Escherichia coli KTE158]
gi|431419496|gb|ELH01845.1| chaperone ClpB [Escherichia coli KTE154]
gi|431431290|gb|ELH13067.1| chaperone ClpB [Escherichia coli KTE194]
gi|431438678|gb|ELH20051.1| chaperone ClpB [Escherichia coli KTE190]
gi|431441763|gb|ELH22871.1| chaperone ClpB [Escherichia coli KTE173]
gi|431443123|gb|ELH24201.1| chaperone ClpB [Escherichia coli KTE175]
gi|431452017|gb|ELH32468.1| chaperone ClpB [Escherichia coli KTE184]
gi|431456101|gb|ELH36446.1| chaperone ClpB [Escherichia coli KTE196]
gi|431462584|gb|ELH42794.1| chaperone ClpB [Escherichia coli KTE183]
gi|431466555|gb|ELH46574.1| chaperone ClpB [Escherichia coli KTE197]
gi|431470083|gb|ELH50007.1| chaperone ClpB [Escherichia coli KTE203]
gi|431472383|gb|ELH52272.1| chaperone ClpB [Escherichia coli KTE202]
gi|431480655|gb|ELH60373.1| chaperone ClpB [Escherichia coli KTE207]
gi|431487782|gb|ELH67425.1| chaperone ClpB [Escherichia coli KTE209]
gi|431490475|gb|ELH70087.1| chaperone ClpB [Escherichia coli KTE211]
gi|431495771|gb|ELH75357.1| chaperone ClpB [Escherichia coli KTE217]
gi|431498854|gb|ELH78038.1| chaperone ClpB [Escherichia coli KTE215]
gi|431504081|gb|ELH82811.1| chaperone ClpB [Escherichia coli KTE218]
gi|431507559|gb|ELH85843.1| chaperone ClpB [Escherichia coli KTE223]
gi|431529587|gb|ELI06285.1| chaperone ClpB [Escherichia coli KTE104]
gi|431529629|gb|ELI06325.1| chaperone ClpB [Escherichia coli KTE105]
gi|431534093|gb|ELI10582.1| chaperone ClpB [Escherichia coli KTE106]
gi|431549278|gb|ELI23361.1| chaperone ClpB [Escherichia coli KTE112]
gi|431550430|gb|ELI24422.1| chaperone ClpB [Escherichia coli KTE113]
gi|431555156|gb|ELI29012.1| chaperone ClpB [Escherichia coli KTE117]
gi|431563643|gb|ELI36847.1| chaperone ClpB [Escherichia coli KTE120]
gi|431568097|gb|ELI41086.1| chaperone ClpB [Escherichia coli KTE124]
gi|431569328|gb|ELI42282.1| chaperone ClpB [Escherichia coli KTE122]
gi|431580227|gb|ELI52791.1| chaperone ClpB [Escherichia coli KTE125]
gi|431582551|gb|ELI54569.1| chaperone ClpB [Escherichia coli KTE128]
gi|431595513|gb|ELI65507.1| chaperone ClpB [Escherichia coli KTE131]
gi|431600784|gb|ELI70450.1| chaperone ClpB [Escherichia coli KTE133]
gi|431603838|gb|ELI73259.1| chaperone ClpB [Escherichia coli KTE137]
gi|431609405|gb|ELI78727.1| chaperone ClpB [Escherichia coli KTE138]
gi|431614621|gb|ELI83761.1| chaperone ClpB [Escherichia coli KTE139]
gi|431617973|gb|ELI86956.1| chaperone ClpB [Escherichia coli KTE145]
gi|431625959|gb|ELI94512.1| chaperone ClpB [Escherichia coli KTE148]
gi|431627373|gb|ELI95780.1| chaperone ClpB [Escherichia coli KTE150]
gi|431632983|gb|ELJ01266.1| chaperone ClpB [Escherichia coli KTE153]
gi|431643348|gb|ELJ11045.1| chaperone ClpB [Escherichia coli KTE160]
gi|431645363|gb|ELJ12919.1| chaperone ClpB [Escherichia coli KTE163]
gi|431655297|gb|ELJ22331.1| chaperone ClpB [Escherichia coli KTE166]
gi|431658892|gb|ELJ25800.1| chaperone ClpB [Escherichia coli KTE167]
gi|431660628|gb|ELJ27496.1| chaperone ClpB [Escherichia coli KTE168]
gi|431669569|gb|ELJ35988.1| chaperone ClpB [Escherichia coli KTE174]
gi|431676528|gb|ELJ42645.1| chaperone ClpB [Escherichia coli KTE177]
gi|431690895|gb|ELJ56363.1| chaperone ClpB [Escherichia coli KTE232]
gi|431699970|gb|ELJ64958.1| chaperone ClpB [Escherichia coli KTE82]
gi|431704983|gb|ELJ69606.1| chaperone ClpB [Escherichia coli KTE88]
gi|431714776|gb|ELJ78953.1| chaperone ClpB [Escherichia coli KTE90]
gi|431719711|gb|ELJ83762.1| chaperone ClpB [Escherichia coli KTE95]
gi|431719928|gb|ELJ83964.1| chaperone ClpB [Escherichia coli KTE94]
gi|431733804|gb|ELJ97209.1| chaperone ClpB [Escherichia coli KTE99]
gi|432345136|gb|ELL39657.1| protein disaggregation chaperone [Escherichia coli J96]
gi|432348189|gb|ELL42640.1| protein disaggregation chaperone [Escherichia coli J96]
gi|441609076|emb|CCP95295.1| ClpB protein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441651585|emb|CCQ02785.1| ClpB protein [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|441714329|emb|CCQ05567.1| ClpB protein [Escherichia coli Nissle 1917]
gi|443423155|gb|AGC88059.1| protein disaggregation chaperone [Escherichia coli APEC O78]
gi|444537635|gb|ELV17552.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0814]
gi|444539174|gb|ELV18955.1| ATP-dependent chaperone protein ClpB [Escherichia coli 09BKT078844]
gi|444547063|gb|ELV25699.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0815]
gi|444556894|gb|ELV34271.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0839]
gi|444557506|gb|ELV34839.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0816]
gi|444562805|gb|ELV39846.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0848]
gi|444572407|gb|ELV48836.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1753]
gi|444576359|gb|ELV52545.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1775]
gi|444578805|gb|ELV54837.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1793]
gi|444592734|gb|ELV67980.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA11]
gi|444592782|gb|ELV68023.1| ATP-dependent chaperone protein ClpB [Escherichia coli ATCC 700728]
gi|444594598|gb|ELV69763.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1805]
gi|444605840|gb|ELV80470.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA13]
gi|444606504|gb|ELV81116.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA19]
gi|444615131|gb|ELV89343.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA2]
gi|444622501|gb|ELV96453.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA47]
gi|444623394|gb|ELV97316.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA48]
gi|444629157|gb|ELW02870.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA8]
gi|444637976|gb|ELW11332.1| ATP-dependent chaperone protein ClpB [Escherichia coli 7.1982]
gi|444640430|gb|ELW13694.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1781]
gi|444644716|gb|ELW17818.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1762]
gi|444653791|gb|ELW26495.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA35]
gi|444659179|gb|ELW31606.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4880]
gi|444663627|gb|ELW35842.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0083]
gi|444669329|gb|ELW41316.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0670]
gi|449316769|gb|EMD06874.1| protein disaggregation chaperone [Escherichia coli O08]
gi|449318506|gb|EMD08572.1| protein disaggregation chaperone [Escherichia coli S17]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|432889814|ref|ZP_20102920.1| chaperone ClpB [Escherichia coli KTE165]
gi|431433011|gb|ELH14685.1| chaperone ClpB [Escherichia coli KTE165]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|308187863|ref|YP_003931994.1| chaperone protein clpB [Pantoea vagans C9-1]
gi|308058373|gb|ADO10545.1| Chaperone protein clpB [Pantoea vagans C9-1]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEMLETELNQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQDLHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLSYPEMKDIVMGVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+++VF L K+I SIA IQL L +L + L IS+ A+K ++ G+
Sbjct: 749 FRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISEDAIKLLAENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|30063993|ref|NP_838164.1| protein disaggregation chaperone [Shigella flexneri 2a str. 2457T]
gi|110806537|ref|YP_690057.1| protein disaggregation chaperone [Shigella flexneri 5 str. 8401]
gi|384544218|ref|YP_005728281.1| Chaperone protein clpB [Shigella flexneri 2002017]
gi|415857540|ref|ZP_11532240.1| ATP-dependent chaperone ClpB [Shigella flexneri 2a str. 2457T]
gi|417704449|ref|ZP_12353544.1| ATP-dependent chaperone ClpB [Shigella flexneri K-218]
gi|417724281|ref|ZP_12373083.1| ATP-dependent chaperone ClpB [Shigella flexneri K-304]
gi|417734715|ref|ZP_12383363.1| ATP-dependent chaperone ClpB [Shigella flexneri 2747-71]
gi|417739488|ref|ZP_12388064.1| ATP-dependent chaperone ClpB [Shigella flexneri 4343-70]
gi|424838928|ref|ZP_18263565.1| protein disaggregation chaperone [Shigella flexneri 5a str. M90T]
gi|30042249|gb|AAP17974.1| heat shock protein [Shigella flexneri 2a str. 2457T]
gi|110616085|gb|ABF04752.1| heat shock protein [Shigella flexneri 5 str. 8401]
gi|281602004|gb|ADA74988.1| Chaperone protein clpB [Shigella flexneri 2002017]
gi|313648272|gb|EFS12716.1| ATP-dependent chaperone ClpB [Shigella flexneri 2a str. 2457T]
gi|332753866|gb|EGJ84243.1| ATP-dependent chaperone ClpB [Shigella flexneri 4343-70]
gi|332755659|gb|EGJ86022.1| ATP-dependent chaperone ClpB [Shigella flexneri 2747-71]
gi|332997821|gb|EGK17431.1| ATP-dependent chaperone ClpB [Shigella flexneri K-218]
gi|333015833|gb|EGK35169.1| ATP-dependent chaperone ClpB [Shigella flexneri K-304]
gi|383467980|gb|EID63001.1| protein disaggregation chaperone [Shigella flexneri 5a str. M90T]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|206578585|ref|YP_002237070.1| protein disaggregation chaperone [Klebsiella pneumoniae 342]
gi|288934032|ref|YP_003438091.1| ATP-dependent chaperone ClpB [Klebsiella variicola At-22]
gi|290510908|ref|ZP_06550277.1| ATP-dependent chaperone ClpB [Klebsiella sp. 1_1_55]
gi|206567643|gb|ACI09419.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae 342]
gi|288888761|gb|ADC57079.1| ATP-dependent chaperone ClpB [Klebsiella variicola At-22]
gi|289775901|gb|EFD83900.1| ATP-dependent chaperone ClpB [Klebsiella sp. 1_1_55]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQELHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVRMSDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|117619764|ref|YP_858496.1| ATP-dependent chaperone protein ClpB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561171|gb|ABK38119.1| ATP-dependent chaperone protein ClpB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/667 (60%), Positives = 544/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNDLAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI +EI++ + +
Sbjct: 395 DEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLELINQEISEKDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+KLL +E+ L
Sbjct: 515 LATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDKLLRMEDQLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + D + +K +M +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMKGMLMEVLTRS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L ++I SIA IQL L +L ++++S+A L+K+ + GF
Sbjct: 749 FRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMGRLEAQGYEVEVSEALLEKLVHAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|417708677|ref|ZP_12357705.1| ATP-dependent chaperone ClpB [Shigella flexneri VA-6]
gi|420332545|ref|ZP_14834195.1| ATP-dependent chaperone ClpB [Shigella flexneri K-1770]
gi|332999364|gb|EGK18949.1| ATP-dependent chaperone ClpB [Shigella flexneri VA-6]
gi|391249376|gb|EIQ08611.1| ATP-dependent chaperone ClpB [Shigella flexneri K-1770]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|401677935|ref|ZP_10809906.1| protein disaggregation chaperone [Enterobacter sp. SST3]
gi|400214706|gb|EJO45621.1| protein disaggregation chaperone [Enterobacter sp. SST3]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 538/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +EN L
Sbjct: 515 IATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMENDLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSHN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDDALKLLSKNGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|422970256|ref|ZP_16974049.1| chaperone ClpB [Escherichia coli TA124]
gi|371600634|gb|EHN89406.1| chaperone ClpB [Escherichia coli TA124]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|420321790|ref|ZP_14823615.1| ATP-dependent chaperone ClpB [Shigella flexneri 2850-71]
gi|391247097|gb|EIQ06353.1| ATP-dependent chaperone ClpB [Shigella flexneri 2850-71]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|238896038|ref|YP_002920774.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238548356|dbj|BAH64707.1| ATP-dependent protease [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 861
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 219 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELADKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 459 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L
Sbjct: 519 AATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQELHH 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 573 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQN 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S ALK +S G+
Sbjct: 753 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDEALKLLSANGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|16761514|ref|NP_457131.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16765976|ref|NP_461591.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29142985|ref|NP_806327.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|167992437|ref|ZP_02573535.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168244680|ref|ZP_02669612.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194448814|ref|YP_002046666.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197265769|ref|ZP_03165843.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|213051813|ref|ZP_03344691.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213649749|ref|ZP_03379802.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850142|ref|ZP_03381040.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289824160|ref|ZP_06543755.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|374981290|ref|ZP_09722618.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378451422|ref|YP_005238782.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378700559|ref|YP_005182516.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378960787|ref|YP_005218273.1| hypothetical protein STBHUCCB_27630 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378990038|ref|YP_005253202.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379701895|ref|YP_005243623.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383497334|ref|YP_005398023.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386592406|ref|YP_006088806.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|419728971|ref|ZP_14255933.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419734207|ref|ZP_14261101.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419739788|ref|ZP_14266531.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419745026|ref|ZP_14271670.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419749085|ref|ZP_14275574.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421569097|ref|ZP_16014803.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421576391|ref|ZP_16021991.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421580578|ref|ZP_16026133.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421585217|ref|ZP_16030718.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422029085|ref|ZP_16375372.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422034033|ref|ZP_16380081.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427559032|ref|ZP_18930585.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427577459|ref|ZP_18935334.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427580449|ref|ZP_18935833.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427614308|ref|ZP_18942999.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427647668|ref|ZP_18949985.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427659054|ref|ZP_18954643.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427664422|ref|ZP_18959627.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427683412|ref|ZP_18964451.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427802802|ref|ZP_18970120.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|54035784|sp|Q7AMH5.1|CLPB_SALTI RecName: Full=Chaperone protein ClpB
gi|54035786|sp|Q7CQ01.1|CLPB_SALTY RecName: Full=Chaperone protein ClpB
gi|25289914|pir||AI0831 ClpB protein (heat shock protein f84.1) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16421207|gb|AAL21550.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16503815|emb|CAD05840.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138617|gb|AAO70187.1| ClpB protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|194407118|gb|ACF67337.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197244024|gb|EDY26644.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205329269|gb|EDZ16033.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205336469|gb|EDZ23233.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|267994801|gb|ACY89686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159207|emb|CBW18722.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|321223454|gb|EFX48519.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323130994|gb|ADX18424.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332989585|gb|AEF08568.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|374354659|gb|AEZ46420.1| hypothetical protein STBHUCCB_27630 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|380464155|gb|AFD59558.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381297674|gb|EIC38761.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381298111|gb|EIC39193.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381298283|gb|EIC39363.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381306782|gb|EIC47652.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381312527|gb|EIC53325.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383799450|gb|AFH46532.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|402518796|gb|EJW26167.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402519783|gb|EJW27143.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402528382|gb|EJW35638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402530399|gb|EJW37619.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414010482|gb|EKS94492.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414010674|gb|EKS94670.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414011341|gb|EKS95305.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414025628|gb|EKT08946.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414035015|gb|EKT17919.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414038868|gb|EKT21570.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414039633|gb|EKT22303.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414040024|gb|EKT22662.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414044093|gb|EKT26555.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414053652|gb|EKT35638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414055415|gb|EKT37309.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|365139798|ref|ZP_09346062.1| chaperone ClpB [Klebsiella sp. 4_1_44FAA]
gi|363654021|gb|EHL92952.1| chaperone ClpB [Klebsiella sp. 4_1_44FAA]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L
Sbjct: 515 AATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQELHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|15803116|ref|NP_289147.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EDL933]
gi|26248955|ref|NP_754995.1| protein disaggregation chaperone [Escherichia coli CFT073]
gi|227888159|ref|ZP_04005964.1| endopeptidase Clp [Escherichia coli 83972]
gi|291283865|ref|YP_003500683.1| heat shock protein [Escherichia coli O55:H7 str. CB9615]
gi|293406102|ref|ZP_06650028.1| disaggregation chaperone [Escherichia coli FVEC1412]
gi|293415865|ref|ZP_06658505.1| ATP-dependent chaperone ClpB [Escherichia coli B185]
gi|293448944|ref|ZP_06663365.1| ATP-dependent chaperone ClpB [Escherichia coli B088]
gi|298381834|ref|ZP_06991431.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Escherichia
coli FVEC1302]
gi|300819934|ref|ZP_07100117.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 107-1]
gi|300900222|ref|ZP_07118408.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 198-1]
gi|300905088|ref|ZP_07122895.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 84-1]
gi|300921136|ref|ZP_07137517.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 115-1]
gi|300922524|ref|ZP_07138633.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 182-1]
gi|300930683|ref|ZP_07146067.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 187-1]
gi|300940371|ref|ZP_07154959.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 21-1]
gi|300948986|ref|ZP_07163042.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 116-1]
gi|300957375|ref|ZP_07169592.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 175-1]
gi|300976570|ref|ZP_07173522.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 200-1]
gi|300986851|ref|ZP_07177834.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 45-1]
gi|301026352|ref|ZP_07189800.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 69-1]
gi|301050461|ref|ZP_07197343.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 185-1]
gi|301305762|ref|ZP_07211849.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 124-1]
gi|301326708|ref|ZP_07220026.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 78-1]
gi|301644034|ref|ZP_07244052.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 146-1]
gi|309794105|ref|ZP_07688529.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 145-7]
gi|331643309|ref|ZP_08344440.1| ATP-dependent chaperone protein ClpB [Escherichia coli H736]
gi|331648336|ref|ZP_08349424.1| ATP-dependent chaperone protein ClpB [Escherichia coli M605]
gi|331678586|ref|ZP_08379260.1| ATP-dependent chaperone protein ClpB [Escherichia coli H591]
gi|332280712|ref|ZP_08393125.1| heat shock protein [Shigella sp. D9]
gi|386630361|ref|YP_006150081.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i2']
gi|386635281|ref|YP_006155000.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i14']
gi|387883785|ref|YP_006314087.1| protein disaggregation chaperone [Escherichia coli Xuzhou21]
gi|415866944|ref|ZP_11539240.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 85-1]
gi|415877635|ref|ZP_11543747.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 79-10]
gi|422355470|ref|ZP_16436185.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 117-3]
gi|422366379|ref|ZP_16446851.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 153-1]
gi|422376237|ref|ZP_16456489.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 60-1]
gi|422382964|ref|ZP_16463116.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 57-2]
gi|25289895|pir||E85905 heat shock protein [imported] - Escherichia coli (strain O157:H7,
substrain EDL933)
gi|12517013|gb|AAG57705.1|AE005489_4 heat shock protein [Escherichia coli O157:H7 str. EDL933]
gi|26109361|gb|AAN81563.1|AE016764_245 ClpB protein [Escherichia coli CFT073]
gi|209762698|gb|ACI79661.1| heat shock protein [Escherichia coli]
gi|209762700|gb|ACI79662.1| heat shock protein [Escherichia coli]
gi|209762702|gb|ACI79663.1| heat shock protein [Escherichia coli]
gi|209762704|gb|ACI79664.1| heat shock protein [Escherichia coli]
gi|209762706|gb|ACI79665.1| heat shock protein [Escherichia coli]
gi|227834799|gb|EEJ45265.1| endopeptidase Clp [Escherichia coli 83972]
gi|290763738|gb|ADD57699.1| Heat shock protein [Escherichia coli O55:H7 str. CB9615]
gi|291322034|gb|EFE61463.1| ATP-dependent chaperone ClpB [Escherichia coli B088]
gi|291426108|gb|EFE99140.1| disaggregation chaperone [Escherichia coli FVEC1412]
gi|291432054|gb|EFF05036.1| ATP-dependent chaperone ClpB [Escherichia coli B185]
gi|298276974|gb|EFI18490.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Escherichia
coli FVEC1302]
gi|300297832|gb|EFJ54217.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 185-1]
gi|300308512|gb|EFJ63032.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 200-1]
gi|300315878|gb|EFJ65662.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 175-1]
gi|300356257|gb|EFJ72127.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 198-1]
gi|300395567|gb|EFJ79105.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 69-1]
gi|300403015|gb|EFJ86553.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 84-1]
gi|300407861|gb|EFJ91399.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 45-1]
gi|300411909|gb|EFJ95219.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 115-1]
gi|300421136|gb|EFK04447.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 182-1]
gi|300451543|gb|EFK15163.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 116-1]
gi|300454825|gb|EFK18318.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 21-1]
gi|300461457|gb|EFK24950.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 187-1]
gi|300527522|gb|EFK48584.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 107-1]
gi|300839016|gb|EFK66776.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 124-1]
gi|300846631|gb|EFK74391.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 78-1]
gi|301077608|gb|EFK92414.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 146-1]
gi|308122010|gb|EFO59272.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 145-7]
gi|315253120|gb|EFU33088.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 85-1]
gi|315290939|gb|EFU50304.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 153-1]
gi|324005832|gb|EGB75051.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 57-2]
gi|324012458|gb|EGB81677.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 60-1]
gi|324016581|gb|EGB85800.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 117-3]
gi|331036780|gb|EGI09004.1| ATP-dependent chaperone protein ClpB [Escherichia coli H736]
gi|331042083|gb|EGI14225.1| ATP-dependent chaperone protein ClpB [Escherichia coli M605]
gi|331073416|gb|EGI44737.1| ATP-dependent chaperone protein ClpB [Escherichia coli H591]
gi|332103064|gb|EGJ06410.1| heat shock protein [Shigella sp. D9]
gi|342927877|gb|EGU96599.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 79-10]
gi|355421260|gb|AER85457.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i2']
gi|355426180|gb|AER90376.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i14']
gi|386797243|gb|AFJ30277.1| protein disaggregation chaperone [Escherichia coli Xuzhou21]
Length = 861
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 225 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 525 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 579 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 818
Query: 673 R 673
R
Sbjct: 819 R 819
>gi|417541083|ref|ZP_12192911.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|353661451|gb|EHD00773.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
Length = 820
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 118 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 177
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 178 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 237
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 238 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 297
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 298 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 357
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 358 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 417
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 418 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 477
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L
Sbjct: 478 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHS 531
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 532 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 591
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 592 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 651
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 652 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 711
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 712 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 771
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 772 DPVYGAR 778
>gi|260598973|ref|YP_003211544.1| protein disaggregation chaperone [Cronobacter turicensis z3032]
gi|260218150|emb|CBA32972.1| Chaperone protein clpB [Cronobacter turicensis z3032]
Length = 857
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 532/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNDELSDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLESERDKLLRMEEDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +++I SIA IQL L +L + IS AL+ + G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAMHISDDALQLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|432481938|ref|ZP_19723893.1| chaperone ClpB [Escherichia coli KTE210]
gi|431006460|gb|ELD21466.1| chaperone ClpB [Escherichia coli KTE210]
Length = 857
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|331654052|ref|ZP_08355052.1| ATP-dependent chaperone protein ClpB [Escherichia coli M718]
gi|331047434|gb|EGI19511.1| ATP-dependent chaperone protein ClpB [Escherichia coli M718]
Length = 861
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 225 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 525 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 579 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 818
Query: 673 R 673
R
Sbjct: 819 R 819
>gi|378980143|ref|YP_005228284.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|364519555|gb|AEW62683.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
Length = 823
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 121 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 180
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 181 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVI 240
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 241 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 300
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 301 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 360
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 361 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELADKERQ 420
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 421 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 480
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L
Sbjct: 481 AATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQELHH 534
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 535 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 594
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 595 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 654
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 655 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQN 714
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S ALK +S G+
Sbjct: 715 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDEALKLLSANGY 774
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 775 DPVYGAR 781
>gi|205353699|ref|YP_002227500.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|375124555|ref|ZP_09769719.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|205273480|emb|CAR38457.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326628805|gb|EGE35148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
Length = 857
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|417789785|ref|ZP_12437399.1| protein disaggregation chaperone [Cronobacter sakazakii E899]
gi|429115632|ref|ZP_19176550.1| ClpB protein [Cronobacter sakazakii 701]
gi|449307191|ref|YP_007439547.1| protein disaggregation chaperone [Cronobacter sakazakii SP291]
gi|333956142|gb|EGL73831.1| protein disaggregation chaperone [Cronobacter sakazakii E899]
gi|426318761|emb|CCK02663.1| ClpB protein [Cronobacter sakazakii 701]
gi|449097224|gb|AGE85258.1| protein disaggregation chaperone [Cronobacter sakazakii SP291]
Length = 857
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 531/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNDELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +K+I SIA IQL L +L + IS AL+ + G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAVHISDDALQLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|218547885|ref|YP_002381676.1| protein disaggregation chaperone [Escherichia fergusonii ATCC
35469]
gi|422807810|ref|ZP_16856238.1| ATP-dependent chaperone ClpB [Escherichia fergusonii B253]
gi|218355426|emb|CAQ88034.1| protein disaggregation chaperone [Escherichia fergusonii ATCC
35469]
gi|324111233|gb|EGC05215.1| ATP-dependent chaperone ClpB [Escherichia fergusonii B253]
Length = 857
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|402779464|ref|YP_006635010.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|402540404|gb|AFQ64553.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae 1084]
Length = 857
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLNMLNEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L
Sbjct: 515 AATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQELHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|415845853|ref|ZP_11525254.1| ATP-dependent chaperone ClpB [Shigella sonnei 53G]
gi|417582098|ref|ZP_12232899.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_B2F1]
gi|417756847|ref|ZP_12404920.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2B]
gi|418041510|ref|ZP_12679732.1| protein disaggregation chaperone [Escherichia coli W26]
gi|419019520|ref|ZP_13566825.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1E]
gi|419035734|ref|ZP_13582819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2D]
gi|419115980|ref|ZP_13660995.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5A]
gi|419403099|ref|ZP_13943819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15C]
gi|420327113|ref|ZP_14828859.1| ATP-dependent chaperone ClpB [Shigella flexneri CCH060]
gi|420354031|ref|ZP_14855128.1| ATP-dependent chaperone ClpB [Shigella boydii 4444-74]
gi|420364479|ref|ZP_14865357.1| ATP-dependent chaperone ClpB [Shigella sonnei 4822-66]
gi|420392397|ref|ZP_14891648.1| ATP-dependent chaperone ClpB [Escherichia coli EPEC C342-62]
gi|323167772|gb|EFZ53467.1| ATP-dependent chaperone ClpB [Shigella sonnei 53G]
gi|345335555|gb|EGW67992.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_B2F1]
gi|377859211|gb|EHU24045.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1E]
gi|377873032|gb|EHU37672.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2B]
gi|377878905|gb|EHU43484.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2D]
gi|377959332|gb|EHV22828.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5A]
gi|378245354|gb|EHY05291.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15C]
gi|383475594|gb|EID67551.1| protein disaggregation chaperone [Escherichia coli W26]
gi|391248417|gb|EIQ07658.1| ATP-dependent chaperone ClpB [Shigella flexneri CCH060]
gi|391277052|gb|EIQ35812.1| ATP-dependent chaperone ClpB [Shigella boydii 4444-74]
gi|391293394|gb|EIQ51676.1| ATP-dependent chaperone ClpB [Shigella sonnei 4822-66]
gi|391312164|gb|EIQ69787.1| ATP-dependent chaperone ClpB [Escherichia coli EPEC C342-62]
Length = 823
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 127 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 187 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 247 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 307 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 367 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 427 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 487 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 541 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 721 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|291086328|ref|ZP_06355437.2| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
29220]
gi|291068913|gb|EFE07022.1| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
29220]
Length = 861
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 225 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSE 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L RV+GQ+
Sbjct: 525 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 579 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDMVLGVVSHNFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGA 818
Query: 673 R 673
R
Sbjct: 819 R 819
>gi|169633163|ref|YP_001706899.1| ATP-dependent protease [Acinetobacter baumannii SDF]
gi|169151955|emb|CAP00815.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter baumannii]
Length = 859
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/668 (60%), Positives = 542/668 (81%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I ++E +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHMEEFLHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTIVMNAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + +A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLKKVQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|340000316|ref|YP_004731200.1| ClpB protein [Salmonella bongori NCTC 12419]
gi|339513678|emb|CCC31433.1| ClpB protein (heat shock protein f84.1) [Salmonella bongori NCTC
12419]
Length = 857
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E+N E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELNDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSHN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIARIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|336246710|ref|YP_004590420.1| protein disaggregation chaperone [Enterobacter aerogenes KCTC 2190]
gi|334732766|gb|AEG95141.1| protein disaggregation chaperone [Enterobacter aerogenes KCTC 2190]
Length = 857
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 535/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKEADEASLKRLDMLNEELADKESQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRLGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREKLLRMEQDLHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQR 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHMSDEALKLLSENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|323491099|ref|ZP_08096289.1| hypothetical protein VIBR0546_19649 [Vibrio brasiliensis LMG 20546]
gi|323314646|gb|EGA67720.1| hypothetical protein VIBR0546_19649 [Vibrio brasiliensis LMG 20546]
Length = 857
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/661 (60%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDE+
Sbjct: 221 QRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK++V+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+D++S+KRL ++ E+ E ++A LE+
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALINEHDDASEKRLTILNDELADKEREFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSALEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EKLL +E++L K V+GQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKCVIGQT 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTELCKTLAKFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFGTVDYQGMKDQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L + +I SIA+IQL L ++ + L +S AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGKDHIKSIASIQLERLSKRMEEKGYSLDVSDKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|187733901|ref|YP_001881380.1| protein disaggregation chaperone [Shigella boydii CDC 3083-94]
gi|187430893|gb|ACD10167.1| ATP-dependent chaperone protein ClpB [Shigella boydii CDC 3083-94]
Length = 857
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIYISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|126641234|ref|YP_001084218.1| ATP-dependent protease Hsp 100 [Acinetobacter baumannii ATCC 17978]
Length = 838
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/668 (60%), Positives = 542/668 (81%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 131 EDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 190
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 191 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 250
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 251 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 310
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 311 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 370
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I ++E +
Sbjct: 371 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKE 430
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ ++Q + E++K R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 431 YNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 490
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 491 ---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHMEEFLHD 545
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 546 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 605
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 606 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 665
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 666 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTIVMNAVSQ 724
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L+ +M L + +A + + G
Sbjct: 725 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDLLIDAG 784
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 785 FDPVYGAR 792
>gi|418257812|ref|ZP_12881289.1| ATP-dependent chaperone ClpB [Shigella flexneri 6603-63]
gi|397896131|gb|EJL12551.1| ATP-dependent chaperone ClpB [Shigella flexneri 6603-63]
Length = 823
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 127 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 187 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 247 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 307 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 367 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 427 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 487 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 541 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 721 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|304399169|ref|ZP_07381036.1| ATP-dependent chaperone ClpB [Pantoea sp. aB]
gi|304353223|gb|EFM17603.1| ATP-dependent chaperone ClpB [Pantoea sp. aB]
Length = 857
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 534/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPGVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEMLETELNQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG++ LE+ L
Sbjct: 455 YAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYGKIPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQDLHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLSYPEMKDIVMGVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+++VF L K+I SIA IQL L +L + L IS A+K ++ G+
Sbjct: 749 FRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISDDAIKLLAENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|422780508|ref|ZP_16833293.1| ATP-dependent chaperone ClpB [Escherichia coli TW10509]
gi|323978455|gb|EGB73539.1| ATP-dependent chaperone ClpB [Escherichia coli TW10509]
Length = 857
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHITSIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|421846352|ref|ZP_16279501.1| protein disaggregation chaperone [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|411772505|gb|EKS56120.1| protein disaggregation chaperone [Citrobacter freundii ATCC 8090 =
MTCC 1658]
Length = 857
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/693 (59%), Positives = 549/693 (79%), Gaps = 15/693 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDMVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ + ++P A I G+LI
Sbjct: 815 RPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|455643273|gb|EMF22401.1| protein disaggregation chaperone [Citrobacter freundii GTC 09479]
Length = 857
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/693 (59%), Positives = 549/693 (79%), Gaps = 15/693 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDMVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ + ++P A I G+LI
Sbjct: 815 RPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|343506630|ref|ZP_08744105.1| hypothetical protein VII00023_03653 [Vibrio ichthyoenteri ATCC
700023]
gi|342802147|gb|EGU37589.1| hypothetical protein VII00023_03653 [Vibrio ichthyoenteri ATCC
700023]
Length = 857
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/661 (60%), Positives = 536/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + ++I+FIDE+
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKD A ERRFQK++V+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRKYMEKDPALERRFQKVIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ E+ + E +A L++
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALINEHDEASEKRLEMLNNELQEKERDFAELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPV+K+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDVEIADVLSKQTGIPVAKMLEAEKEKLLRMEQVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLATFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFNTLDYQGIKHEVMEVVNKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA IQL L ++ + +++S+ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIAAIQLLRLAKRMEERGYHMEVSEKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|417385010|ref|ZP_12150193.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353607067|gb|EHC61103.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
Length = 798
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 96 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 155
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 156 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 215
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 216 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 275
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 276 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 335
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 336 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 395
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 396 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 455
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 456 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 509
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 510 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 569
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 570 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 629
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 630 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 689
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 690 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 749
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 750 DPVYGAR 756
>gi|429101412|ref|ZP_19163386.1| ClpB protein [Cronobacter turicensis 564]
gi|426288061|emb|CCJ89499.1| ClpB protein [Cronobacter turicensis 564]
Length = 857
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 531/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNDELSDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLESERDKLLRMEEDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +++I SIA IQL L +L + IS AL+ + G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAMHISDDALQLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|445275841|ref|ZP_21410580.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|444887455|gb|ELY11153.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 832
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 130 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 189
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 190 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 249
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 250 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 309
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 310 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 369
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 370 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 429
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 430 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 489
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 490 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 543
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 544 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 603
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 604 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 663
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 664 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 723
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 724 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 783
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 784 DPVYGAR 790
>gi|417140198|ref|ZP_11983448.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0259]
gi|417311067|ref|ZP_12097861.1| Chaperone protein ClpB [Escherichia coli PCN033]
gi|417690778|ref|ZP_12339998.1| ATP-dependent chaperone ClpB [Shigella boydii 5216-82]
gi|332088101|gb|EGI93226.1| ATP-dependent chaperone ClpB [Shigella boydii 5216-82]
gi|338767303|gb|EGP22129.1| Chaperone protein ClpB [Escherichia coli PCN033]
gi|386156321|gb|EIH12666.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0259]
Length = 857
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEVATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|423141231|ref|ZP_17128869.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379050403|gb|EHY68295.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 823
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 121 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 180
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 181 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 240
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 241 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 300
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 301 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 360
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 361 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 420
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 421 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 480
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 481 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 534
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 535 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 594
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 595 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 654
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 655 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 714
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 715 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 774
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 775 DPVYGAR 781
>gi|436751232|ref|ZP_20520160.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434970226|gb|ELL62855.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
Length = 855
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|207858010|ref|YP_002244661.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|378956364|ref|YP_005213851.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|421360375|ref|ZP_15810657.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421361704|ref|ZP_15811961.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421369377|ref|ZP_15819552.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370962|ref|ZP_15821123.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421378529|ref|ZP_15828613.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421383159|ref|ZP_15833201.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421386614|ref|ZP_15836625.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421389951|ref|ZP_15839927.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421394229|ref|ZP_15844171.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421400925|ref|ZP_15850806.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421403251|ref|ZP_15853104.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421410027|ref|ZP_15859812.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412138|ref|ZP_15861900.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421415313|ref|ZP_15865041.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421423252|ref|ZP_15872912.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421427902|ref|ZP_15877520.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421430574|ref|ZP_15880160.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421433808|ref|ZP_15883365.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421440416|ref|ZP_15889896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421444185|ref|ZP_15893623.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|436611647|ref|ZP_20513921.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436798555|ref|ZP_20523439.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436810228|ref|ZP_20529335.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436812334|ref|ZP_20530913.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436832908|ref|ZP_20537198.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436852710|ref|ZP_20542768.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436861467|ref|ZP_20548651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436862274|ref|ZP_20549069.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436872649|ref|ZP_20555531.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436882986|ref|ZP_20561570.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436891271|ref|ZP_20565971.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436897935|ref|ZP_20570103.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436903329|ref|ZP_20573793.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436914583|ref|ZP_20579430.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436919284|ref|ZP_20582065.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436923294|ref|ZP_20585134.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436938811|ref|ZP_20593598.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436944521|ref|ZP_20596968.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436948206|ref|ZP_20598478.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436960075|ref|ZP_20604146.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436973706|ref|ZP_20610830.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436985723|ref|ZP_20615173.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436998540|ref|ZP_20620023.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437010458|ref|ZP_20624268.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437015822|ref|ZP_20625967.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437027158|ref|ZP_20630047.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437043329|ref|ZP_20636842.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437053314|ref|ZP_20642429.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437062236|ref|ZP_20647602.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437067153|ref|ZP_20650215.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078303|ref|ZP_20656000.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437085710|ref|ZP_20660261.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437096519|ref|ZP_20664876.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437115753|ref|ZP_20669509.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437118290|ref|ZP_20670257.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437132350|ref|ZP_20677874.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437140770|ref|ZP_20682744.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437148596|ref|ZP_20687651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437155766|ref|ZP_20691984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437163186|ref|ZP_20696495.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437168948|ref|ZP_20699386.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437179490|ref|ZP_20705405.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437188751|ref|ZP_20710546.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437263399|ref|ZP_20719573.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437269919|ref|ZP_20723088.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437273894|ref|ZP_20724987.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437302718|ref|ZP_20733644.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437315526|ref|ZP_20737214.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437327398|ref|ZP_20740340.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437342506|ref|ZP_20745414.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437411738|ref|ZP_20752916.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437443261|ref|ZP_20758006.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437467132|ref|ZP_20764352.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437475832|ref|ZP_20766909.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437495015|ref|ZP_20772615.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437503209|ref|ZP_20774826.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437542120|ref|ZP_20782544.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437555930|ref|ZP_20784897.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437579134|ref|ZP_20791659.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437586610|ref|ZP_20793465.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437608524|ref|ZP_20800713.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437624017|ref|ZP_20805185.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437650000|ref|ZP_20809637.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437662975|ref|ZP_20813696.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437677959|ref|ZP_20817450.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437690912|ref|ZP_20820543.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437714417|ref|ZP_20827651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437794804|ref|ZP_20837444.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437801405|ref|ZP_20838137.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437965280|ref|ZP_20852572.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438094745|ref|ZP_20861700.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438104522|ref|ZP_20865879.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438111003|ref|ZP_20868291.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438148248|ref|ZP_20876294.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|445171861|ref|ZP_21396270.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445183346|ref|ZP_21398674.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445228312|ref|ZP_21404655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445327269|ref|ZP_21412731.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445348332|ref|ZP_21419617.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445354827|ref|ZP_21421632.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|206709813|emb|CAR34165.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|357206975|gb|AET55021.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|395981500|gb|EJH90721.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395982460|gb|EJH91668.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395992138|gb|EJI01257.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395996258|gb|EJI05310.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|395996388|gb|EJI05439.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396005582|gb|EJI14560.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396012437|gb|EJI21334.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396015010|gb|EJI23893.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396015555|gb|EJI24429.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396021759|gb|EJI30574.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396022904|gb|EJI31707.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396029199|gb|EJI37937.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396037731|gb|EJI46377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396043381|gb|EJI51984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396048102|gb|EJI56664.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396050475|gb|EJI58999.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396054400|gb|EJI62892.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396061471|gb|EJI69896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396068551|gb|EJI76899.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396068934|gb|EJI77279.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|434938293|gb|ELL45288.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434960435|gb|ELL53814.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434965476|gb|ELL58417.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434969476|gb|ELL62180.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434976430|gb|ELL68666.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434981507|gb|ELL73394.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434984643|gb|ELL76371.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434985911|gb|ELL77598.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434999274|gb|ELL90471.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|434999506|gb|ELL90680.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435002972|gb|ELL94017.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435005400|gb|ELL96320.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435014066|gb|ELM04676.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435019759|gb|ELM10203.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435022665|gb|ELM12961.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435029119|gb|ELM19177.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435034335|gb|ELM24225.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435039526|gb|ELM29296.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435041922|gb|ELM31655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435053115|gb|ELM42569.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435053339|gb|ELM42791.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435056264|gb|ELM45655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435061294|gb|ELM50523.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435061936|gb|ELM51132.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435066629|gb|ELM55708.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435083249|gb|ELM71854.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435083979|gb|ELM72580.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435085217|gb|ELM73770.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435088720|gb|ELM77177.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435089445|gb|ELM77878.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435097959|gb|ELM86218.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435101703|gb|ELM89836.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435104396|gb|ELM92451.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435107420|gb|ELM95404.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435114647|gb|ELN02440.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435122620|gb|ELN10135.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435129687|gb|ELN16975.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435132008|gb|ELN19212.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435133227|gb|ELN20407.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435137798|gb|ELN24836.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435142129|gb|ELN29046.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435149425|gb|ELN36121.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435150574|gb|ELN37239.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435155353|gb|ELN41901.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435160853|gb|ELN47097.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435171755|gb|ELN57318.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435177017|gb|ELN62364.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435177884|gb|ELN63148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435180002|gb|ELN65110.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435191579|gb|ELN76135.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435192908|gb|ELN77417.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435204076|gb|ELN87791.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435211052|gb|ELN94264.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435215781|gb|ELN98265.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435222977|gb|ELO05024.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435226964|gb|ELO08501.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435235713|gb|ELO16496.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435237204|gb|ELO17903.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435241583|gb|ELO21929.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435242380|gb|ELO22691.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435252808|gb|ELO32316.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435254698|gb|ELO34082.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435259776|gb|ELO38990.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435267027|gb|ELO45751.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435268272|gb|ELO46866.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435274339|gb|ELO52455.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435281395|gb|ELO59069.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435286019|gb|ELO63360.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435291842|gb|ELO68638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435304065|gb|ELO79876.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435314312|gb|ELO87737.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435322168|gb|ELO94486.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435331518|gb|ELP02669.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435339920|gb|ELP08612.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|444861013|gb|ELX85908.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444866249|gb|ELX90987.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444870831|gb|ELX95302.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444876273|gb|ELY00452.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444880864|gb|ELY04927.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444887448|gb|ELY11148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 857
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|440771618|ref|ZP_20950532.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436420859|gb|ELP18714.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
Length = 857
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D IYGAR
Sbjct: 809 DPIYGAR 815
>gi|390437342|ref|ZP_10225880.1| protein disaggregation chaperone [Pantoea agglomerans IG1]
Length = 857
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 533/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEMLETELNQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG++ LE+ L
Sbjct: 455 YAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYGKIPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQDLHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLSYPEMKDIVMGVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+++VF L K+I SIA IQL L +L + L IS A+K ++ G+
Sbjct: 749 FRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISDDAIKLLAENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|365101806|ref|ZP_09332436.1| chaperone ClpB [Citrobacter freundii 4_7_47CFAA]
gi|363647356|gb|EHL86585.1| chaperone ClpB [Citrobacter freundii 4_7_47CFAA]
Length = 857
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/699 (58%), Positives = 551/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDMVLGVVSNN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|372275030|ref|ZP_09511066.1| protein disaggregation chaperone [Pantoea sp. SL1_M5]
Length = 857
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 533/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEMLETELNQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG++ LE+ L
Sbjct: 455 YAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYGKIPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQDLHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLSYPEMKDIVMGVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+++VF L K+I SIA IQL L +L + L IS A+K ++ G+
Sbjct: 749 FRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISDDAIKLLAENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|145297344|ref|YP_001140185.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida A449]
gi|418362096|ref|ZP_12962740.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|142850116|gb|ABO88437.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida A449]
gi|356686731|gb|EHI51324.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 857
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 542/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLSDLAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI KEI + + +
Sbjct: 395 DEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLDLISKEIGEKDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG + +LE+ L
Sbjct: 455 YNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+KLL +E+ L
Sbjct: 515 LATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDKLLRMEDKLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + D + +K +M +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMKALLMEVLTRS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L +I SIA IQL L +L ++++S+A L+K+ + GF
Sbjct: 749 FRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEVEVSEALLEKLVHAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|237729507|ref|ZP_04559988.1| disaggregation chaperone [Citrobacter sp. 30_2]
gi|226908113|gb|EEH94031.1| disaggregation chaperone [Citrobacter sp. 30_2]
Length = 861
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/693 (59%), Positives = 549/693 (79%), Gaps = 15/693 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I+FIDEL
Sbjct: 225 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSE 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L RV+GQ+
Sbjct: 525 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 579 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDMVLGVVSHNFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGA 818
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ + ++P A I G+LI
Sbjct: 819 RPL---KRAIQQQI-----ENPLAQQILSGELI 843
>gi|449473904|ref|XP_004154017.1| PREDICTED: chaperone protein ClpB-like [Cucumis sativus]
Length = 861
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 537/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 219 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E+++ E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALNKESDEASKKRLDMLNEELDEKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+
Sbjct: 459 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK--- 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q +I + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L +
Sbjct: 516 ---QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREKLLRMEQDLHQ 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 573 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSQN 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 753 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDDALKLLSENGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|418514455|ref|ZP_13080660.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366079129|gb|EHN43118.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
Length = 857
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|375002451|ref|ZP_09726791.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353077139|gb|EHB42899.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 861
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 219 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 459 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 519 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 573 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 753 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|417744471|ref|ZP_12392995.1| ATP-dependent chaperone ClpB [Shigella flexneri 2930-71]
gi|420342987|ref|ZP_14844456.1| ATP-dependent chaperone ClpB [Shigella flexneri K-404]
gi|420374583|ref|ZP_14874550.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
gi|332765573|gb|EGJ95786.1| ATP-dependent chaperone ClpB [Shigella flexneri 2930-71]
gi|391264802|gb|EIQ23787.1| ATP-dependent chaperone ClpB [Shigella flexneri K-404]
gi|391316101|gb|EIQ73582.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
Length = 798
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 102 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 161
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 162 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 221
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 222 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 281
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 282 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 341
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 342 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 401
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 402 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 461
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 462 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 515
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 516 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 575
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 576 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 635
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 636 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 695
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 696 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 755
Query: 673 R 673
R
Sbjct: 756 R 756
>gi|422792066|ref|ZP_16844768.1| ATP-dependent chaperone ClpB [Escherichia coli TA007]
gi|323971463|gb|EGB66699.1| ATP-dependent chaperone ClpB [Escherichia coli TA007]
Length = 809
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 113 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 172
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 173 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 232
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 233 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 292
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 293 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 352
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 353 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 412
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 413 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 472
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 473 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 526
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 527 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 586
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 587 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 646
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 647 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 706
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 707 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 766
Query: 673 R 673
R
Sbjct: 767 R 767
>gi|334125226|ref|ZP_08499217.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
gi|333387301|gb|EGK58501.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
Length = 861
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 537/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 219 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E+++ E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALNKESDEASKKRLDMLNEELDEKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+
Sbjct: 459 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK--- 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q +I + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L +
Sbjct: 516 ---QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREKLLRMEQDLHQ 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 573 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSQN 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 753 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDDALKLLSANGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|429105773|ref|ZP_19167642.1| ClpB protein [Cronobacter malonaticus 681]
gi|429111337|ref|ZP_19173107.1| ClpB protein [Cronobacter malonaticus 507]
gi|426292496|emb|CCJ93755.1| ClpB protein [Cronobacter malonaticus 681]
gi|426312494|emb|CCJ99220.1| ClpB protein [Cronobacter malonaticus 507]
Length = 857
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 531/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNDELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +++I SIA IQL L +L + IS AL+ + G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAVHISDDALQLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|56414627|ref|YP_151702.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62181233|ref|YP_217650.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|168262170|ref|ZP_02684143.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168464169|ref|ZP_02698086.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168822477|ref|ZP_02834477.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194443281|ref|YP_002041924.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194472869|ref|ZP_03078853.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736447|ref|YP_002115671.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197248685|ref|YP_002147563.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197363554|ref|YP_002143191.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198243260|ref|YP_002216671.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200388055|ref|ZP_03214667.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204929414|ref|ZP_03220488.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|224584513|ref|YP_002638311.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238909506|ref|ZP_04653343.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|375115573|ref|ZP_09760743.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|375120160|ref|ZP_09765327.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|409246359|ref|YP_006887066.1| Chaperone protein clpB 2 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416425230|ref|ZP_11692265.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416428136|ref|ZP_11693636.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416438592|ref|ZP_11699571.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416444260|ref|ZP_11703575.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416451863|ref|ZP_11708613.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416457253|ref|ZP_11712041.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416471313|ref|ZP_11719159.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416474725|ref|ZP_11720290.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416489037|ref|ZP_11726006.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416497226|ref|ZP_11729608.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416507694|ref|ZP_11735638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416515027|ref|ZP_11738438.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416527361|ref|ZP_11743196.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416532861|ref|ZP_11745893.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416540936|ref|ZP_11750686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416549265|ref|ZP_11755302.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416563432|ref|ZP_11762785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416573080|ref|ZP_11767664.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416579681|ref|ZP_11771475.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416587188|ref|ZP_11775896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416594256|ref|ZP_11780337.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416597887|ref|ZP_11782274.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416606432|ref|ZP_11787774.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416616636|ref|ZP_11794260.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416619236|ref|ZP_11794996.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416632441|ref|ZP_11801430.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416640766|ref|ZP_11805195.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416647656|ref|ZP_11808528.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416661132|ref|ZP_11815354.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416665644|ref|ZP_11816879.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416677945|ref|ZP_11822385.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416706416|ref|ZP_11831675.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416711904|ref|ZP_11835615.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416718100|ref|ZP_11840208.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416726683|ref|ZP_11846728.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416733321|ref|ZP_11850397.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416737812|ref|ZP_11852954.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416747220|ref|ZP_11858196.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416758177|ref|ZP_11863529.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416765406|ref|ZP_11868787.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416771063|ref|ZP_11872368.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418482222|ref|ZP_13051245.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418492655|ref|ZP_13059136.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418497418|ref|ZP_13063838.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418500676|ref|ZP_13067070.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418504930|ref|ZP_13071283.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418510546|ref|ZP_13076826.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418524997|ref|ZP_13090981.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|418760238|ref|ZP_13316395.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418766415|ref|ZP_13322491.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418773353|ref|ZP_13329340.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418774360|ref|ZP_13330329.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418780080|ref|ZP_13335973.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418782674|ref|ZP_13338535.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418790107|ref|ZP_13345887.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418791658|ref|ZP_13347413.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418797885|ref|ZP_13353567.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418803885|ref|ZP_13359501.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418805630|ref|ZP_13361212.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418809792|ref|ZP_13365341.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418817880|ref|ZP_13373362.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418823718|ref|ZP_13379125.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418833712|ref|ZP_13388630.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418838050|ref|ZP_13392905.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418841636|ref|ZP_13396454.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418846612|ref|ZP_13401380.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418851349|ref|ZP_13406062.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418856356|ref|ZP_13411002.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418865541|ref|ZP_13420018.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418865981|ref|ZP_13420446.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419786445|ref|ZP_14312172.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419792847|ref|ZP_14318477.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|421887443|ref|ZP_16318600.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|437829716|ref|ZP_20844238.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|440766164|ref|ZP_20945163.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|445141004|ref|ZP_21385209.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445157178|ref|ZP_21392909.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|452123537|ref|YP_007473785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|56128884|gb|AAV78390.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62128866|gb|AAX66569.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
system with DnaK, DnaJ, and GrpE [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|194401944|gb|ACF62166.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194459233|gb|EDX48072.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711949|gb|ACF91170.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195633279|gb|EDX51693.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197095031|emb|CAR60577.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197212388|gb|ACH49785.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197937776|gb|ACH75109.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199605153|gb|EDZ03698.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204321133|gb|EDZ06333.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205341135|gb|EDZ27899.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205349068|gb|EDZ35699.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|224469040|gb|ACN46870.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|320087093|emb|CBY96861.1| Chaperone protein clpB 2 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322614490|gb|EFY11421.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621445|gb|EFY18298.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624306|gb|EFY21139.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629395|gb|EFY26173.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633635|gb|EFY30377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638322|gb|EFY35020.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639760|gb|EFY36443.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647378|gb|EFY43874.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650452|gb|EFY46862.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656055|gb|EFY52355.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661449|gb|EFY57674.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662649|gb|EFY58857.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667022|gb|EFY63197.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671391|gb|EFY67514.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677602|gb|EFY73665.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681572|gb|EFY77602.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322683972|gb|EFY79982.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322715719|gb|EFZ07290.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323195541|gb|EFZ80719.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197914|gb|EFZ83037.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203092|gb|EFZ88124.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323210517|gb|EFZ95401.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218202|gb|EGA02914.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221532|gb|EGA05945.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323230965|gb|EGA15083.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234683|gb|EGA18769.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238722|gb|EGA22772.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241421|gb|EGA25452.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246881|gb|EGA30848.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253280|gb|EGA37110.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257076|gb|EGA40785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260451|gb|EGA44062.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264492|gb|EGA47998.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269627|gb|EGA53080.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326624427|gb|EGE30772.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|363553272|gb|EHL37528.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363556032|gb|EHL40250.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363564474|gb|EHL48522.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363569331|gb|EHL53293.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363569941|gb|EHL53886.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363571863|gb|EHL55763.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363572447|gb|EHL56339.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366054678|gb|EHN19026.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366055874|gb|EHN20208.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366064955|gb|EHN29152.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366068546|gb|EHN32686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366069829|gb|EHN33950.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366076744|gb|EHN40780.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366830316|gb|EHN57188.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372207197|gb|EHP20697.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|379982933|emb|CCF90873.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|392618124|gb|EIX00536.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392621684|gb|EIX04034.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392730160|gb|EIZ87410.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392738004|gb|EIZ95154.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392742866|gb|EIZ99943.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392750562|gb|EJA07524.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392751172|gb|EJA08127.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392759168|gb|EJA16024.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392759665|gb|EJA16513.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392767929|gb|EJA24689.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392770497|gb|EJA27223.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392772233|gb|EJA28936.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392783589|gb|EJA40207.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392784383|gb|EJA40984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392785709|gb|EJA42280.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392786838|gb|EJA43387.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392794914|gb|EJA51300.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392797356|gb|EJA53673.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392808313|gb|EJA64364.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392810065|gb|EJA66091.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392817795|gb|EJA73699.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392819681|gb|EJA75539.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392827764|gb|EJA83465.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392840829|gb|EJA96363.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|435303916|gb|ELO79738.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|436423564|gb|ELP21374.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444846612|gb|ELX71773.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444851725|gb|ELX76812.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|451912541|gb|AGF84347.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 857
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|312973164|ref|ZP_07787337.1| ATP-dependent chaperone ClpB [Escherichia coli 1827-70]
gi|310333106|gb|EFQ00320.1| ATP-dependent chaperone ClpB [Escherichia coli 1827-70]
Length = 798
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 102 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 161
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 162 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 221
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 222 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 281
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 282 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 341
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 342 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 401
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 402 EWKTEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 461
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 462 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 515
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 516 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 575
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 576 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 635
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 636 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 695
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 696 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 755
Query: 673 R 673
R
Sbjct: 756 R 756
>gi|393764456|ref|ZP_10353066.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Alishewanella agri BL06]
gi|392604585|gb|EIW87486.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Alishewanella agri BL06]
Length = 859
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/693 (58%), Positives = 553/693 (79%), Gaps = 15/693 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLT +A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LTKYTIDLTARAESGKLDPVIGRDEEIRRCVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L K++L LD+ LLAG KYRGEFE+RLK +L E++ + II+FIDE+
Sbjct: 221 QRIVNKEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERLKAVLNEVAKEEGQIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E A+ +E D++SKKR I+++I++LE +Y L++
Sbjct: 401 IRMQMDSKPEELDRLERRIIQLKLEDNALAKETDDASKKRRDTIREQIDELEQRYNELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W+ EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LE+ L SQ +
Sbjct: 461 VWESEKAALQGTQNIKAELEQARLDLEVARRASDLQRMSELQYGRIPELEKKLDLASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV +EIA+++S+ TGIPV+K+++ ER+KLL +E+ L +VVGQ
Sbjct: 521 MQ------EMTLLRHKVTDQEIADVLSKATGIPVNKMLEGERDKLLRMEDALHAKVVGQQ 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAV+NAIRRSR+GL+D +P GSF+FLGPTGVGKTEL K L+ +F++ ++++RIDM
Sbjct: 575 EAVSAVANAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELTKALAQFLFDSPDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E + +K +M + FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQEHYREFSYTEMKEMLMGVLSKQFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L+ + I IA+IQL L+ +L + + L +S AAL+K++ +GFD +YGA
Sbjct: 755 NRLDEAVVFHPLDDRQIKQIASIQLARLEQRLQQRDYQLSVSDAALEKLAEVGFDPLYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ + H ++P A + G+++
Sbjct: 815 RPL---KRAI-----QQHLENPLAQALLQGEIL 839
>gi|336451274|ref|ZP_08621714.1| ATP-dependent chaperone ClpB [Idiomarina sp. A28L]
gi|336281891|gb|EGN75154.1| ATP-dependent chaperone ClpB [Idiomarina sp. A28L]
Length = 857
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/668 (60%), Positives = 536/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQREALQKYTIDLTERAEQGKLDPVIGRDEEIRRTLQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ LLAG KYRG+FE+RLK +L E+ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKRKRVLSLDLGSLLAGAKYRGDFEERLKAVLNELHQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL++KYE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKEKYELHHSVEITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLKIE +A+ +E D++SKKRL + E+++LE
Sbjct: 395 DEAASSIRMQMDSKPEELDRLERRIIQLKIEQQALAKEKDDASKKRLETLSNELSELEGA 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE +W EK ++ Q IKE +++ R + A R D +++L+YG++ +LE L+
Sbjct: 455 YAELETVWNSEKMAVQGHQHIKELLDQARNDLEIANRARDLNRMAELQYGKIPELEHQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++Q + TLL+ +V EEIAE++SR TGIPVS++++ EREKLL +E+ L +
Sbjct: 515 AALSAEMQ------EMTLLRNRVTDEEIAEVLSRWTGIPVSRMLEGEREKLLQMEDNLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVVGQHEAVVAVANSIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELCKALARFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVM--NEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS I+E G+ + ++ M + ++
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQE-HAGEVQYEEMKAMLGDVLRT 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
F+PEF+NRID+ +VF L ++ IA IQL L N+L + L +S+AA+ +++ +G
Sbjct: 748 AFKPEFLNRIDETVVFHPLADSDLNRIAKIQLQRLFNRLEGRDYKLDVSEAAITQLAKVG 807
Query: 666 FDLIYGAR 673
FD ++GAR
Sbjct: 808 FDPLFGAR 815
>gi|300718033|ref|YP_003742836.1| Chaperone protein [Erwinia billingiae Eb661]
gi|299063869|emb|CAX60989.1| Chaperone protein [Erwinia billingiae Eb661]
Length = 857
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 534/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLSLDMGALVAGAKYRGEFEERLKAVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E
Sbjct: 395 DEAGSSIRMQIDSKPESLDRLERRIIQLKLEQQALKKETDDASIKRLSMLEDELNQKERD 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ +L + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKSEKASLSGTQTIKAELEQAKLAMEQARRLGDLAQMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV ++++ ER+KLL +E L +
Sbjct: 515 LATQ------SEGKTMRLLRNRVTEVEIADVLARWTGIPVDRMMEGERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRLDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALSYPEMKDVVMTVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L ++L DL IS AAL K++ G+
Sbjct: 749 FRPEFINRIDELVVFHPLGEQHIASIAKIQLQRLYDRLADRGYDLHISDAALHKLAENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|157148104|ref|YP_001455423.1| protein disaggregation chaperone [Citrobacter koseri ATCC BAA-895]
gi|157085309|gb|ABV14987.1| hypothetical protein CKO_03914 [Citrobacter koseri ATCC BAA-895]
Length = 861
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/693 (59%), Positives = 549/693 (79%), Gaps = 15/693 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LQKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 225 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSE 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L RV+GQ+
Sbjct: 525 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 579 EAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKELVLGVVSHNFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDDALKLLSANGYDPVYGA 818
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
R + K+++ + ++P A I G+LI
Sbjct: 819 RPL---KRAIQQQI-----ENPLAQQILSGELI 843
>gi|161615589|ref|YP_001589554.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161364953|gb|ABX68721.1| hypothetical protein SPAB_03370 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 820
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 118 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 177
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 178 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 237
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 238 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 297
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 298 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 357
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 358 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 417
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 418 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 477
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 478 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 531
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 532 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 591
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 592 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 651
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 652 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 711
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 712 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 771
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 772 DPVYGAR 778
>gi|415811834|ref|ZP_11504147.1| ATP-dependent chaperone ClpB [Escherichia coli LT-68]
gi|417239377|ref|ZP_12036393.1| ATP-dependent chaperone protein ClpB [Escherichia coli 9.0111]
gi|417278141|ref|ZP_12065457.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2303]
gi|417624590|ref|ZP_12274887.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_H.1.8]
gi|417673475|ref|ZP_12322927.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 155-74]
gi|417683458|ref|ZP_12332805.1| ATP-dependent chaperone ClpB [Shigella boydii 3594-74]
gi|417829028|ref|ZP_12475576.1| ATP-dependent chaperone ClpB [Shigella flexneri J1713]
gi|419166727|ref|ZP_13711175.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6E]
gi|419216869|ref|ZP_13759866.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8D]
gi|419224608|ref|ZP_13767506.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9A]
gi|419266272|ref|ZP_13808641.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10C]
gi|419303539|ref|ZP_13845514.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11C]
gi|419350701|ref|ZP_13892036.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13B]
gi|419356154|ref|ZP_13897407.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13C]
gi|419361218|ref|ZP_13902434.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13D]
gi|419366349|ref|ZP_13907507.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13E]
gi|419813247|ref|ZP_14338100.1| protein disaggregation chaperone [Escherichia coli O32:H37 str. P4]
gi|420348871|ref|ZP_14850253.1| ATP-dependent chaperone ClpB [Shigella boydii 965-58]
gi|420361393|ref|ZP_14862332.1| ATP-dependent chaperone ClpB [Shigella sonnei 3226-85]
gi|420381868|ref|ZP_14881308.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 225-75]
gi|421683751|ref|ZP_16123542.1| ATP-dependent chaperone ClpB [Shigella flexneri 1485-80]
gi|424533509|ref|ZP_17976866.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4422]
gi|424540920|ref|ZP_17983849.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4013]
gi|425111332|ref|ZP_18513257.1| ATP-dependent chaperone protein ClpB [Escherichia coli 6.0172]
gi|425157267|ref|ZP_18556537.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA34]
gi|425175429|ref|ZP_18573554.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA504]
gi|425200975|ref|ZP_18597189.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE037]
gi|425289734|ref|ZP_18680570.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3006]
gi|425301446|ref|ZP_18691335.1| ATP-dependent chaperone protein ClpB [Escherichia coli 07798]
gi|425318562|ref|ZP_18707358.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1736]
gi|429015806|ref|ZP_19082708.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0943]
gi|429027740|ref|ZP_19093752.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0427]
gi|323173093|gb|EFZ58724.1| ATP-dependent chaperone ClpB [Escherichia coli LT-68]
gi|332089246|gb|EGI94353.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 155-74]
gi|332091986|gb|EGI97064.1| ATP-dependent chaperone ClpB [Shigella boydii 3594-74]
gi|335574327|gb|EGM60653.1| ATP-dependent chaperone ClpB [Shigella flexneri J1713]
gi|345376356|gb|EGX08294.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_H.1.8]
gi|378006469|gb|EHV69452.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6E]
gi|378060300|gb|EHW22496.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8D]
gi|378084050|gb|EHW45977.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9A]
gi|378115045|gb|EHW76594.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10C]
gi|378143617|gb|EHX04808.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11C]
gi|378199027|gb|EHX59495.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13C]
gi|378199229|gb|EHX59695.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13B]
gi|378202339|gb|EHX62777.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13D]
gi|378211840|gb|EHX72173.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13E]
gi|385153935|gb|EIF15958.1| protein disaggregation chaperone [Escherichia coli O32:H37 str. P4]
gi|386213111|gb|EII23544.1| ATP-dependent chaperone protein ClpB [Escherichia coli 9.0111]
gi|386239109|gb|EII76043.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2303]
gi|390860758|gb|EIP23050.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4422]
gi|390862609|gb|EIP24785.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4013]
gi|391267912|gb|EIQ26843.1| ATP-dependent chaperone ClpB [Shigella boydii 965-58]
gi|391277116|gb|EIQ35872.1| ATP-dependent chaperone ClpB [Shigella sonnei 3226-85]
gi|391299375|gb|EIQ57339.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 225-75]
gi|404337631|gb|EJZ64082.1| ATP-dependent chaperone ClpB [Shigella flexneri 1485-80]
gi|408069291|gb|EKH03682.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA34]
gi|408090876|gb|EKH24129.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA504]
gi|408114538|gb|EKH46076.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE037]
gi|408212539|gb|EKI37061.1| ATP-dependent chaperone protein ClpB [Escherichia coli 07798]
gi|408212633|gb|EKI37150.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3006]
gi|408237828|gb|EKI60673.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1736]
gi|408550250|gb|EKK27588.1| ATP-dependent chaperone protein ClpB [Escherichia coli 6.0172]
gi|427260741|gb|EKW26705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0943]
gi|427278327|gb|EKW42792.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0427]
Length = 798
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 102 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 161
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 162 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 221
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 222 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 281
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 282 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 341
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 342 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 401
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 402 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 461
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 462 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 515
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 516 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 575
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 576 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 635
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 636 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 695
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 696 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 755
Query: 673 R 673
R
Sbjct: 756 R 756
>gi|417282105|ref|ZP_12069405.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3003]
gi|386246434|gb|EII88164.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3003]
Length = 857
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP + +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGVKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLARRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|400287671|ref|ZP_10789703.1| chaperonin clpA/B [Psychrobacter sp. PAMC 21119]
Length = 865
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/667 (59%), Positives = 537/667 (80%), Gaps = 1/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTI+LTE+A LGKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDALNKYTINLTEQAELGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQ+IING+VP L K++L LD+ L+AG K+RGEFE+RLK +L +++ + ++I
Sbjct: 212 IVEGLAQKIINGDVPEGLRRKEVLSLDLGALIAGAKFRGEFEERLKSVLSDLAKQEGNVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 272 LFIDELHTMVGAGKSEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDRKLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D ++ + +I +LE +
Sbjct: 392 DEAASRLRMEMDSKPESLGKLDSRLIQLKMQREVLKNEEDAGAQAERKALNAQIEELEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L +IW+ EK L+K SQQ+K+E++K R+ +KA+R+ D++T+SKL+Y + +LER +
Sbjct: 452 YADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMSKLQYETIPQLERRIT 511
Query: 368 EKS-QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
E + + + LL+ KV EIAE+V+ TGIPV+K++Q EREK+L +E L
Sbjct: 512 ESDLAEQKEQTGEGSGVKLLRNKVTDNEIAEVVAAATGIPVNKMMQGEREKMLAMEEKLH 571
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
+RV+GQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K+L+ +F++E+
Sbjct: 572 ERVIGQDEAVEAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKSLANFLFDSED 631
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
SI+RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA+ DVF
Sbjct: 632 SIVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGALTEAVRRKPYSVILFDEVEKAHPDVF 691
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIY 606
NILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM E IK VM+ V +
Sbjct: 692 NILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMVGESYEDIKAEVMDSVGQH 751
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+I+VF L + IA IQL+ L+ +L + MD+++S A+ K+ +G+
Sbjct: 752 FRPEFVNRIDEIVVFHPLGMSQMAGIATIQLDRLRQRLHEREMDIELSADAMNKLVAVGY 811
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 812 DPVYGAR 818
>gi|59711173|ref|YP_203949.1| protein disaggregation chaperone [Vibrio fischeri ES114]
gi|59479274|gb|AAW85061.1| protein disaggregation chaperone [Vibrio fischeri ES114]
Length = 861
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/667 (60%), Positives = 540/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IG+PGVGKTA
Sbjct: 155 EEKRQALEKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LDI L+AG K+RGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDIGALVAGAKFRGEFEERLKAVLNELAKEEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 275 LFIDEVHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPTVEDTVAILRGLKERYEIHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +DKL+R++IQLKIE +A+ +E D++S KRL + E+ + E +
Sbjct: 395 DEAASSIRMEIDSKPESLDKLDRKIIQLKIEQQALVKESDDASLKRLDSLNLELMQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R + A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWKAEKAALSGTQHIKTELETARSNMEIARRAGDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LLK KV EIAE++SR TGIPV+K+++ ER+KLL +E +L
Sbjct: 515 LAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVNKMLEGERDKLLKMEEVLHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++E++
Sbjct: 569 RVIGQAEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFMFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+KI++ + + IK VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEKIQQHFGELNYAGIKEVVMDVVSQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D+ +VF L +++I +IA+IQL L+ +L + + L+++ AL I+ GF
Sbjct: 749 FRPEFLNRVDETVVFHPLAQEHIKNIASIQLQRLEKRLNEKDYQLQVTDEALNLIAEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|82778016|ref|YP_404365.1| protein disaggregation chaperone [Shigella dysenteriae Sd197]
gi|309789454|ref|ZP_07684040.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
gi|81242164|gb|ABB62874.1| heat shock protein [Shigella dysenteriae Sd197]
gi|308922697|gb|EFP68218.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
Length = 857
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIV A+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVVAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|419927010|ref|ZP_14444753.1| protein disaggregation chaperone [Escherichia coli 541-1]
gi|388408436|gb|EIL68782.1| protein disaggregation chaperone [Escherichia coli 541-1]
Length = 857
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDVVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|218559513|ref|YP_002392426.1| protein disaggregation chaperone [Escherichia coli S88]
gi|386600563|ref|YP_006102069.1| ATP-dependent chaperone protein ClpB [Escherichia coli IHE3034]
gi|386603372|ref|YP_006109672.1| protein disaggregation chaperone [Escherichia coli UM146]
gi|417086020|ref|ZP_11953301.1| protein disaggregation chaperone [Escherichia coli cloneA_i1]
gi|419944842|ref|ZP_14461312.1| protein disaggregation chaperone [Escherichia coli HM605]
gi|422750407|ref|ZP_16804318.1| ATP-dependent chaperone ClpB [Escherichia coli H252]
gi|422754665|ref|ZP_16808491.1| ATP-dependent chaperone ClpB [Escherichia coli H263]
gi|422840557|ref|ZP_16888527.1| chaperone ClpB [Escherichia coli H397]
gi|432358930|ref|ZP_19602149.1| chaperone ClpB [Escherichia coli KTE4]
gi|432363690|ref|ZP_19606853.1| chaperone ClpB [Escherichia coli KTE5]
gi|432575473|ref|ZP_19811946.1| chaperone ClpB [Escherichia coli KTE55]
gi|432588871|ref|ZP_19825226.1| chaperone ClpB [Escherichia coli KTE58]
gi|432598715|ref|ZP_19834988.1| chaperone ClpB [Escherichia coli KTE62]
gi|432755423|ref|ZP_19989970.1| chaperone ClpB [Escherichia coli KTE22]
gi|432779502|ref|ZP_20013725.1| chaperone ClpB [Escherichia coli KTE59]
gi|432788495|ref|ZP_20022624.1| chaperone ClpB [Escherichia coli KTE65]
gi|432821941|ref|ZP_20055631.1| chaperone ClpB [Escherichia coli KTE118]
gi|432823429|ref|ZP_20057112.1| chaperone ClpB [Escherichia coli KTE123]
gi|433006053|ref|ZP_20194480.1| chaperone ClpB [Escherichia coli KTE227]
gi|433008648|ref|ZP_20197063.1| chaperone ClpB [Escherichia coli KTE229]
gi|433154671|ref|ZP_20339608.1| chaperone ClpB [Escherichia coli KTE176]
gi|433164483|ref|ZP_20349217.1| chaperone ClpB [Escherichia coli KTE179]
gi|433169557|ref|ZP_20354181.1| chaperone ClpB [Escherichia coli KTE180]
gi|218366282|emb|CAR04034.1| protein disaggregation chaperone [Escherichia coli S88]
gi|294493689|gb|ADE92445.1| ATP-dependent chaperone protein ClpB [Escherichia coli IHE3034]
gi|307625856|gb|ADN70160.1| protein disaggregation chaperone [Escherichia coli UM146]
gi|323951207|gb|EGB47083.1| ATP-dependent chaperone ClpB [Escherichia coli H252]
gi|323957039|gb|EGB52765.1| ATP-dependent chaperone ClpB [Escherichia coli H263]
gi|355350857|gb|EHG00053.1| protein disaggregation chaperone [Escherichia coli cloneA_i1]
gi|371605986|gb|EHN94588.1| chaperone ClpB [Escherichia coli H397]
gi|388417427|gb|EIL77270.1| protein disaggregation chaperone [Escherichia coli HM605]
gi|430875662|gb|ELB99184.1| chaperone ClpB [Escherichia coli KTE4]
gi|430885121|gb|ELC08048.1| chaperone ClpB [Escherichia coli KTE5]
gi|431105099|gb|ELE09445.1| chaperone ClpB [Escherichia coli KTE55]
gi|431119264|gb|ELE22272.1| chaperone ClpB [Escherichia coli KTE58]
gi|431129647|gb|ELE31760.1| chaperone ClpB [Escherichia coli KTE62]
gi|431301516|gb|ELF90722.1| chaperone ClpB [Escherichia coli KTE22]
gi|431325766|gb|ELG13144.1| chaperone ClpB [Escherichia coli KTE59]
gi|431336292|gb|ELG23411.1| chaperone ClpB [Escherichia coli KTE65]
gi|431367010|gb|ELG53496.1| chaperone ClpB [Escherichia coli KTE118]
gi|431379087|gb|ELG64023.1| chaperone ClpB [Escherichia coli KTE123]
gi|431513111|gb|ELH91196.1| chaperone ClpB [Escherichia coli KTE227]
gi|431522833|gb|ELH99978.1| chaperone ClpB [Escherichia coli KTE229]
gi|431672931|gb|ELJ39163.1| chaperone ClpB [Escherichia coli KTE176]
gi|431685703|gb|ELJ51270.1| chaperone ClpB [Escherichia coli KTE179]
gi|431686554|gb|ELJ52115.1| chaperone ClpB [Escherichia coli KTE180]
Length = 857
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS LK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEVLKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|440229579|ref|YP_007343372.1| ATP-dependent chaperone ClpB [Serratia marcescens FGI94]
gi|440051284|gb|AGB81187.1| ATP-dependent chaperone ClpB [Serratia marcescens FGI94]
Length = 857
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/701 (58%), Positives = 556/701 (79%), Gaps = 15/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLAKQEGSVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ E+ + E +Y+ LE+
Sbjct: 401 IRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLSTELEQKEREYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ LE+ L +Q
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKISLEQARRVGDLGRMSELQYGKIPDLEKQLAAATQ-- 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LL+ +V EIAE++++ TGIPV+++++ ER+KLL +E L RV+GQD
Sbjct: 519 ----SEGKTMKLLRNRVTDAEIAEVLAKATGIPVARMLEGERDKLLRLEQELHSRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+++++++RIDM
Sbjct: 575 EAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K +VM V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVGHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L +K+I +IA IQL+ L +L + ++ I++ AL+ + G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGQKHIAAIAKIQLDRLYQRLEERGYEVTITEPALELLGKTGYDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
R + K+++ + ++P A I G+L+ P +LD
Sbjct: 815 RPL---KRAIQQEI-----ENPLAQQILSGELVPGKPVTLD 847
>gi|419960229|ref|ZP_14476273.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae GS1]
gi|388604901|gb|EIM34127.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae GS1]
Length = 857
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/667 (60%), Positives = 538/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E+++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALNKESDEASKKRLDMLNEELDEKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L +
Sbjct: 515 IATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDDALKLLSENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|271501677|ref|YP_003334703.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech586]
gi|270345232|gb|ACZ77997.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech586]
Length = 857
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/707 (57%), Positives = 555/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ E+ + E +
Sbjct: 395 DEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLKRLEILNSELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIAE+++R TGIPVS++++ EREKLL +E L +
Sbjct: 515 AATQAE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLESEREKLLRMEQELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + ++ V+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEMNYAQMRDMVLGVVSHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L + +I SIA IQL L ++ + + IS AAL+ + GF
Sbjct: 749 FRPEFINRIDEVVVFHPLGQAHITSIAQIQLQRLYKRMEERGYTVSISDAALELLGKSGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K+++ ++ ++P A I G L+ +LD
Sbjct: 809 DPVYGARPL---KRAIQQMI-----ENPLAQQILSGALVPGKAVTLD 847
>gi|91211926|ref|YP_541912.1| protein disaggregation chaperone [Escherichia coli UTI89]
gi|117624816|ref|YP_853729.1| protein disaggregation chaperone [Escherichia coli APEC O1]
gi|237706819|ref|ZP_04537300.1| heat shock protein [Escherichia sp. 3_2_53FAA]
gi|422361379|ref|ZP_16442005.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 110-3]
gi|91073500|gb|ABE08381.1| heat shock protein [Escherichia coli UTI89]
gi|115513940|gb|ABJ02015.1| heat shock protein [Escherichia coli APEC O1]
gi|226899859|gb|EEH86118.1| heat shock protein [Escherichia sp. 3_2_53FAA]
gi|315284809|gb|EFU44254.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 110-3]
Length = 861
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 225 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 525 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 579 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS LK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEVLKLLSENGYDPVYGA 818
Query: 673 R 673
R
Sbjct: 819 R 819
>gi|197335143|ref|YP_002155324.1| ATP-dependent chaperone ClpB [Vibrio fischeri MJ11]
gi|423685282|ref|ZP_17660090.1| ATP-dependent chaperone ClpB [Vibrio fischeri SR5]
gi|197316633|gb|ACH66080.1| ATP-dependent chaperone ClpB [Vibrio fischeri MJ11]
gi|371495783|gb|EHN71378.1| ATP-dependent chaperone ClpB [Vibrio fischeri SR5]
Length = 861
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/670 (60%), Positives = 540/670 (80%), Gaps = 13/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IG+PGVGKTA
Sbjct: 155 EEKRQALEKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LDI L+AG K+RGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDIGALVAGAKFRGEFEERLKAVLNELAKEEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 275 LFIDEVHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPTVEDTVAILRGLKERYEIHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +DKL+R++IQLKIE +A+ +E D++S KRL + E+ + E +
Sbjct: 395 DEAASSIRMEIDSKPESLDKLDRKIIQLKIEQQALVKESDDASLKRLDSLNLELMQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + +Q IK E+E R + A R D +S+L+YG + +LE+ L
Sbjct: 455 YAELEEVWKAEKAALSGTQHIKTELETARSNMEIARRAGDLNRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LLK KV EIAE++SR TGIPV+K+++ ER+KLL +E +L
Sbjct: 515 LAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVNKMLEGERDKLLKMEEVLHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++E++
Sbjct: 569 RVIGQAEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFMFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EMEKGDKEIIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+KI+ E+ G IK VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEKIQQHFGELNYGG---IKEIVMDVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+FRPEF+NR+D+ +VF L +++I +IA+IQL L+ +L + + L+++ AL I+
Sbjct: 746 SQHFRPEFLNRVDETVVFHPLAQEHIKNIASIQLQRLEKRLNEKDYQLQVTDEALNLIAE 805
Query: 664 IGFDLIYGAR 673
GFD +YGAR
Sbjct: 806 AGFDPVYGAR 815
>gi|421856930|ref|ZP_16289288.1| chaperone protein ClpB [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187677|dbj|GAB75489.1| chaperone protein ClpB [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 859
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/667 (60%), Positives = 539/667 (80%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTI+LTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EEQRDSLNKYTINLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL K++L LD+ LLAG KYRGEFE+RLK +L +++ + +I
Sbjct: 212 IVEGLAQRIVNGEVPESLKDKQVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAKQEGRVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I +++ +
Sbjct: 392 DEAASRIKMELDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKSEVNYLEKQIEEVQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ +++ + E+++ R+ + KA R+ DW S+L+YG + +L++ L+
Sbjct: 452 YNDLEEVWKAEKTLVEGTKKAQVELDQARVALEKAQREGDWAEASRLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ ++ + + LL+ KV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 QD-----EVIEDHEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLHMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G E ++ VMN V +
Sbjct: 687 ILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGASDEEMRSVVMNAVSHH 746
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID++++F L + I IA+IQL L+++L + +M L I A + + GF
Sbjct: 747 FRPEFINRIDELVIFHSLKKSQIRGIADIQLERLRSRLAERDMSLTIDDTAFDLLIDAGF 806
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 807 DPVYGAR 813
>gi|444355311|ref|YP_007391455.1| ClpB protein [Enterobacter aerogenes EA1509E]
gi|443906141|emb|CCG33915.1| ClpB protein [Enterobacter aerogenes EA1509E]
Length = 812
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 535/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 110 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 169
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 170 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 229
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 230 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 289
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 290 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 349
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 350 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKEADEASLKRLDMLNEELADKESQ 409
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 410 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRLGDLARMSELQYGKIPELEKQLA 469
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 470 AATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREKLLRMEQDLHH 523
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 524 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 583
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 584 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 643
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 644 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQR 703
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S ALK +S G+
Sbjct: 704 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHMSDEALKLLSENGY 763
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 764 DPVYGAR 770
>gi|71065383|ref|YP_264110.1| chaperonin clpA/B [Psychrobacter arcticus 273-4]
gi|71038368|gb|AAZ18676.1| putative chaperonin clpA/B [Psychrobacter arcticus 273-4]
Length = 865
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/669 (59%), Positives = 541/669 (80%), Gaps = 5/669 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTI+LTE+A LGKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDALNKYTINLTEQAELGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQ+IING+VP L K++L LD+ L+AG K+RGEFE+RLK +L ++S + ++I
Sbjct: 212 IVEGLAQKIINGDVPEGLRRKEVLSLDLGALIAGAKFRGEFEERLKAVLSDLSKQEGNVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDRKLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D ++ ++ +I +LE +
Sbjct: 392 DEAASRLRMEMDSKPESLGKLDSRLIQLKMQREVLKNEEDAGAQAERKVLDAQIEELEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L +IW+ EK L+K SQQ+K+E++K R+ +KA+R+ D++T+SKL+Y + +LER +
Sbjct: 452 YADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMSKLQYETIPQLERRIH 511
Query: 368 EKS---QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
E QK+ N+ K LL+ KV EIAE+V+ TGIPVSK++Q ER+K+L +E
Sbjct: 512 ESDLAEQKEQTGENSGVK--LLRNKVTDNEIAEVVAAATGIPVSKMLQGERDKMLAMEEN 569
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K+L+ +F++
Sbjct: 570 LHERVIGQDEAVEAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKSLANFLFDS 629
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
E++I+RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA+ D
Sbjct: 630 EDAIVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGALTEAVRRKPYSVILFDEVEKAHPD 689
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVK 604
VFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM E IK VM+ V
Sbjct: 690 VFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMVGESYEDIKAEVMDSVG 749
Query: 605 IYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNI 664
+FRPEF+NRID+I+VF L + IA IQLN L+ +L + +D+++S A+ K+ +
Sbjct: 750 QHFRPEFVNRIDEIVVFHPLGMSQMAGIAAIQLNRLRQRLYERELDIELSADAMNKLVAV 809
Query: 665 GFDLIYGAR 673
G+D +YGAR
Sbjct: 810 GYDPVYGAR 818
>gi|161502241|ref|YP_001569353.1| protein disaggregation chaperone [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160863588|gb|ABX20211.1| hypothetical protein SARI_00266 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 861
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/661 (60%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 165 LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 224
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 225 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 284
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 285 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 344
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 345 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 404
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 405 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEE 464
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 465 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSE 524
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L RV+GQ+
Sbjct: 525 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQN 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 579 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVGHNFRPEFI 758
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I +IA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 759 NRIDEVVVFHPLGEQHIAAIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGA 818
Query: 673 R 673
R
Sbjct: 819 R 819
>gi|183597507|ref|ZP_02959000.1| hypothetical protein PROSTU_00781 [Providencia stuartii ATCC 25827]
gi|188023153|gb|EDU61193.1| ATP-dependent chaperone protein ClpB [Providencia stuartii ATCC
25827]
Length = 857
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/708 (58%), Positives = 556/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++++E+ + E +
Sbjct: 395 DEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLDMLEEELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+ WK EK + +Q IK E+E R ++ KA R D +S+L+YG + +LE+ L+
Sbjct: 455 YSSLEEEWKAEKASLTGTQHIKAELENARYEMEKARRSGDLAKMSELQYGRIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + LL+ KV EIAEI++R TGIPVS++++ EREKLL +E L +
Sbjct: 515 AATKAE------GKNMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREKLLRMEQQLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGTIGYSE-MKDMVMEVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L +++I +IANIQL L +L + ++ + AAL+KI G
Sbjct: 748 SFRPEFINRIDEVVVFHPLGKEHITNIANIQLGRLYKRLEEHGYEVSATPAALEKIGEAG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD I+GAR + K+++ + ++P A I G LI P LD
Sbjct: 808 FDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPVVLD 847
>gi|429097512|ref|ZP_19159618.1| ClpB protein [Cronobacter dublinensis 582]
gi|426283852|emb|CCJ85731.1| ClpB protein [Cronobacter dublinensis 582]
Length = 823
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 529/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 121 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 180
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 181 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 240
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 241 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 300
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 301 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 360
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQL +A+ +E DE+SKKRL ++ E+N E +
Sbjct: 361 DEAASSIRMQIDSKPEELDRLERRIIQLGDRQQALMKESDEASKKRLDMLNDELNDKERQ 420
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 421 YSTLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 480
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 481 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQDLHQ 534
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 535 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 594
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 595 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 654
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 655 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 714
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +++I SIA IQL L +L + IS AL+ + G+
Sbjct: 715 FRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAVHISDEALQLLGENGY 774
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 775 DPVYGAR 781
>gi|146312713|ref|YP_001177787.1| protein disaggregation chaperone [Enterobacter sp. 638]
gi|145319589|gb|ABP61736.1| ATPase AAA-2 domain protein [Enterobacter sp. 638]
Length = 857
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLERRIIQLKLEQQALKKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMSELQYGKIPELEK--- 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + + LL+ KV EIA++++R TGIPV+++++ ER+KLL +E+ L
Sbjct: 512 ---QLEFAMQSEGKTMRLLRNKVTDVEIADVLARWTGIPVARMLEGERDKLLRMEHDLHH 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E + D +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGELDYGHMKDLVMGVVSHS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYEIHISDDALKLLSENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|420338046|ref|ZP_14839608.1| ATP-dependent chaperone ClpB [Shigella flexneri K-315]
gi|391259920|gb|EIQ18994.1| ATP-dependent chaperone ClpB [Shigella flexneri K-315]
Length = 823
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 127 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 187 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 247 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 307 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 367 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 427 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 487 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 541 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS LK +S G+D +YGA
Sbjct: 721 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEVLKLLSENGYDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|238897711|ref|YP_002923390.1| ATP-dependent protease, Hsp 100 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|229465468|gb|ACQ67242.1| ATP-dependent protease, Hsp 100 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 857
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/707 (58%), Positives = 553/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+H LKK+TIDLTE+A KLDPVIGRD+EIRRAIQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EDHRQALKKFTIDLTERAEQSKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ LLAG KYRGEFE+RLK +LK++S +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKKKRVLSLDMGALLAGAKYRGEFEERLKGVLKDLSKQGGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAASLSQRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +DKLERR+IQLK+E +A+ +E DE+SKKRL ++ E+ K E +
Sbjct: 395 DEAAASIRMQIDSKPEALDKLERRIIQLKLEQQALNKEQDEASKKRLKMLNDELEKKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK ++E+ ++ + +A R SD +S+++YG++ LE+ L+
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKAQLEEAKITLEQARRVSDLAKMSEMQYGKIPALEKQLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++K++ + LL+ +V EIAE+++R TGIPV ++++ EREKLL +E L +
Sbjct: 515 AATEKEM------SSMKLLRNRVTDIEIAEVLARWTGIPVDRMLESEREKLLRMEENLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
+V+GQ+EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 QVIGQNEAVIAVSNALRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAYFLFSSKDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYE+GGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHTVSRLLGAPPGYVGYEQGGYLTEAVRRRPYSVVLLDEVEKAHQDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E + D +K +VM V+ Y
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFSQADYSDMKKSVMEVVRRY 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +++ SIA IQL L +L + I+ +AL ++ G+
Sbjct: 749 FRPEFINRIDEVVVFHPLEAQHLESIAQIQLKQLYQRLEEKGYTAGITPSALGFLTKEGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K+++ + ++P A I G LI P LD
Sbjct: 809 DPVYGARPL---KRAIQQEI-----ENPLAQQILSGQLIPGMPIVLD 847
>gi|421495516|ref|ZP_15942797.1| ATP-dependent chaperone protein ClpB [Aeromonas media WS]
gi|407185455|gb|EKE59231.1| ATP-dependent chaperone protein ClpB [Aeromonas media WS]
Length = 857
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/668 (60%), Positives = 539/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+KYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVLIG PGVGKTA
Sbjct: 155 EENRQALEKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGAPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLSDLAKEEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFVDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL L+ E+ + E +
Sbjct: 395 DEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLDLLNHELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE++WK EK + +Q IK +E+ R + A R D +S+L+YG + +LE+ L
Sbjct: 455 YNELEEVWKAEKAALAGTQHIKAALEQARQDLEVARRAGDLGRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+KLL +E+ L
Sbjct: 515 LATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDKLLRMEDQLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE--MEKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E EK D E +K +M +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHYAEK-DYEEMKALLMELLTR 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+ +VF L +I SIA IQL L +L ++++S+ L K+ + G
Sbjct: 748 SFRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEVEVSEELLTKLVHAG 807
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 808 FDPVYGAR 815
>gi|397164282|ref|ZP_10487739.1| ATP-dependent chaperone protein ClpB [Enterobacter radicincitans
DSM 16656]
gi|396094128|gb|EJI91681.1| ATP-dependent chaperone protein ClpB [Enterobacter radicincitans
DSM 16656]
Length = 857
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/694 (59%), Positives = 549/694 (79%), Gaps = 17/694 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E A+ +E DE+SKKRL ++ +E+ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQRALMKESDEASKKRLEMLNEELEDKERQYSALEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAMEQARRNGDLGRMSELQYGKIPELEKQLEAATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ +V EIAE+++R TGIPVS++++ EREKLL +E+ L RV+GQD
Sbjct: 521 ------GKTMRLLRNRVTDIEIAEVLARWTGIPVSRMMEGEREKLLRMEHDLHHRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+++++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFMFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKIYFRPEF 611
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E GD + +K VM V FRPEF
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGDLDYGHMKELVMGVVSQSFRPEF 753
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+++VF L K+I +IA IQL L +L + + IS ALK +S G+D +YG
Sbjct: 754 INRIDEVVVFHPLGEKHIAAIAQIQLQRLYKRLEERGYAVTISDEALKLLSANGYDPVYG 813
Query: 672 ARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
AR + K+++ + ++P A I G+LI
Sbjct: 814 ARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|237809508|ref|YP_002893948.1| ATP-dependent chaperone ClpB [Tolumonas auensis DSM 9187]
gi|237501769|gb|ACQ94362.1| ATP-dependent chaperone ClpB [Tolumonas auensis DSM 9187]
Length = 858
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 535/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEKRQALEKYTIDLTERAEQGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ LLAG KYRGEFE+RLK +L E++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKHKRVLSLDMGSLLAGAKYRGEFEERLKAVLNELAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA I+++IDSKPE +D+LERR++QLK+E +A+ +E D +S +RL +I KEI + + +
Sbjct: 395 DEAAASIRLQIDSKPEQLDRLERRIVQLKMEQQALMKESDVASAQRLGIINKEITEKDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y LE+IWK EK + +Q IK E+E+ R +++ A R D +S+L YG + +LE+ L
Sbjct: 455 YNELEEIWKAEKAALAGTQHIKSELEQARQELDVARRAGDLAKMSELHYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q + TLL+ +V EEIAE++SR TGIPV+++++ ER+KLL +E L +
Sbjct: 515 LASQAEMQ------EQTLLRNRVTDEEIAEVLSRWTGIPVARMLEGERDKLLRMEEKLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVIGQDEAVNAVANAIRRSRAGLSDPMRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN +I+MTSNLGSD I+E + + +K +M +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNAVIIMTSNLGSDLIQEHHHLMEYQEMKSMLMEVLTRS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+ +VF L ++I SIA IQL L +L + +++ + L ++ GF
Sbjct: 749 FRPEFLNRIDETVVFHPLGAEHIQSIAKIQLQSLVKRLEDIGYKVELRDSLLSYLAQSGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|251788635|ref|YP_003003356.1| protein disaggregation chaperone [Dickeya zeae Ech1591]
gi|247537256|gb|ACT05877.1| ATP-dependent chaperone ClpB [Dickeya zeae Ech1591]
Length = 857
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/707 (57%), Positives = 556/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ E+ + E +
Sbjct: 395 DEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLKRLEILNAELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIAE+++R TGIPVS++++ EREKLL +E L +
Sbjct: 515 AATQAE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLESEREKLLRMEQELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + ++ V+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEMNYSQMRDMVLGIVSHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L + +I SIA IQL L ++ + + IS AAL+ + GF
Sbjct: 749 FRPEFINRIDEVVVFHPLGQSHITSIAQIQLQRLYKRMEERGYTVSISDAALELLGKSGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K+++ ++ ++P A I G L+ +LD
Sbjct: 809 DPVYGARPL---KRAIQQMI-----ENPLAQKILSGALVPGKSVTLD 847
>gi|415840105|ref|ZP_11521621.1| ATP-dependent chaperone ClpB [Escherichia coli RN587/1]
gi|323188385|gb|EFZ73676.1| ATP-dependent chaperone ClpB [Escherichia coli RN587/1]
Length = 823
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 127 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 186
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP + +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 187 QRIINGEVPEGVKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 246
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 247 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 306
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 307 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 366
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 367 IRMQIDSKPEELDRLARRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 426
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 427 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 486
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 487 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 540
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 541 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 600
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 601 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 660
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 661 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 720
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 721 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 780
Query: 673 R 673
R
Sbjct: 781 R 781
>gi|343511111|ref|ZP_08748296.1| hypothetical protein VIS19158_01764 [Vibrio scophthalmi LMG 19158]
gi|343514770|ref|ZP_08751838.1| hypothetical protein VIBRN418_00225 [Vibrio sp. N418]
gi|342799458|gb|EGU35024.1| hypothetical protein VIS19158_01764 [Vibrio scophthalmi LMG 19158]
gi|342799507|gb|EGU35071.1| hypothetical protein VIBRN418_00225 [Vibrio sp. N418]
Length = 857
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/661 (60%), Positives = 536/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + ++I+FIDE+
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKD A ERRFQK++V+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRKYMEKDPALERRFQKVIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ E+ + E +A L++
Sbjct: 401 IRMQIDSKPESLDKLERKIIQLKIEQQALINEHDEASEKRLEMLNNELLEKERDFAELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIA+++S+ TGIPV+K+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDVEIADVLSKQTGIPVAKMLEAEKEKLLRMEQVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLATFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFNTLDYQGIKNEVMEVVNKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA IQL L ++ + +++S+ AL I+ +GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIAAIQLLRLAKRMEERGYHMEVSEKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|423121670|ref|ZP_17109354.1| chaperone ClpB [Klebsiella oxytoca 10-5246]
gi|376393762|gb|EHT06417.1| chaperone ClpB [Klebsiella oxytoca 10-5246]
Length = 857
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/699 (58%), Positives = 550/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKEADEASLKRLDMLNEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMMEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K ++ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLILGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHMSDEALKLLSANGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|261493173|ref|ZP_05989704.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261495905|ref|ZP_05992327.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261308426|gb|EEY09707.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311176|gb|EEY12348.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 855
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/668 (60%), Positives = 546/668 (81%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEEMAAKERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+IWK EK+ + +Q IK E+E R+ +++A R++D++ +S+L+YG + LE+ L+
Sbjct: 453 YSELEEIWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMSELQYGVIPNLEKQLQ 512
Query: 368 --EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
E +K NA+ LL+TKV EEIAE++S+ TGIPV+K+++ E+EKLL +E +L
Sbjct: 513 AVENGEK------NADA-QLLRTKVTEEEIAEVLSKATGIPVAKMMEGEKEKLLRMEEVL 565
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTEL KTL+ +F++
Sbjct: 566 HARVIGQNEAVDAVTNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSKTLANFLFDDP 625
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR PYS++LLDE+EKA+ DV
Sbjct: 626 DAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLLDEVEKAHPDV 685
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 605
FNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E +++K VM V
Sbjct: 686 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYKGYDVVKEMVMEVVGQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+ ++F L +++I SIA IQL L +L + ++ ++ AAL I G
Sbjct: 746 HFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTDAALDHIGKAG 805
Query: 666 FDLIYGAR 673
FD ++GAR
Sbjct: 806 FDPLFGAR 813
>gi|254362598|ref|ZP_04978693.1| endopeptidase ClpA [Mannheimia haemolytica PHL213]
gi|452744796|ref|ZP_21944637.1| ATP-dependent Clp protease subunit B [Mannheimia haemolytica
serotype 6 str. H23]
gi|153094206|gb|EDN75089.1| endopeptidase ClpA [Mannheimia haemolytica PHL213]
gi|452087214|gb|EME03596.1| ATP-dependent Clp protease subunit B [Mannheimia haemolytica
serotype 6 str. H23]
Length = 855
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/662 (60%), Positives = 544/662 (82%), Gaps = 9/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + +I+FIDE+
Sbjct: 219 QRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNDLAKEEGQVILFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 279 HTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 339 PTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +Y+ LE+
Sbjct: 399 LRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEEMAAKEREYSELEE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK--EKSQ 371
IWK EK+ + +Q IK E+E R+ +++A R++D++ +S+L+YG + LE+ L+ E +
Sbjct: 459 IWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMSELQYGVIPNLEKQLQAVENGE 518
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
K NA+ LL+TKV EEIAE++S+ TGIPV+K+++ E+EKLL +E +L RV+G
Sbjct: 519 K------NADA-QLLRTKVTEEEIAEVLSKATGIPVAKMMEGEKEKLLRMEEVLHARVIG 571
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
Q+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTEL KTL+ +F++ ++++RI
Sbjct: 572 QNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSKTLANFLFDDPDAMVRI 631
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR PYS++LLDE+EKA+ DVFNILLQ
Sbjct: 632 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLLDEVEKAHPDVFNILLQ 691
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 611
+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E +++K VM V +FRPEF
Sbjct: 692 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYKGYDVVKEMVMEVVGQHFRPEF 751
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+ ++F L +++I SIA IQL L +L + ++ ++ AAL I GFD ++G
Sbjct: 752 INRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTDAALDHIGKAGFDPLFG 811
Query: 672 AR 673
AR
Sbjct: 812 AR 813
>gi|425278990|ref|ZP_18670226.1| ATP-dependent chaperone protein ClpB [Escherichia coli ARS4.2123]
gi|408200376|gb|EKI25558.1| ATP-dependent chaperone protein ClpB [Escherichia coli ARS4.2123]
Length = 798
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 102 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 161
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP + +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 162 QRIINGEVPEGVKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 221
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 222 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 281
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 282 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 341
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 342 IRMQIDSKPEELDRLARRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 401
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 402 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 461
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 462 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 515
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 516 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 575
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 576 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 635
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 636 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 695
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 696 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 755
Query: 673 R 673
R
Sbjct: 756 R 756
>gi|410666026|ref|YP_006918397.1| ATP-dependent chaperone ClpB [Simiduia agarivorans SA1 = DSM 21679]
gi|409028383|gb|AFV00668.1| ATP-dependent chaperone ClpB [Simiduia agarivorans SA1 = DSM 21679]
Length = 858
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/663 (63%), Positives = 539/663 (81%), Gaps = 9/663 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L K+TIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LDKFTIDLTARAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L E++ + II+FIDEL
Sbjct: 221 QRIVNGEVPEGLKNKRLLSLDLGSLLAGAKFRGEFEERLKNVLNELAKQEGRIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSEEDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+LERRLIQLKIE EA+K++ E++KK+L L+ EI K+E +YA+LE+
Sbjct: 401 IRMEIDSKPEEMDRLERRLIQLKIEREAVKKDETEAAKKQLNLLDGEIEKVEREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK + SQ IK +E+ RL + A R D +S+L+YG + +LE+ L SQ +
Sbjct: 461 IWRTEKAALSGSQDIKSSLEQARLDMEAARRAGDLARMSELQYGVIPELEKQLDMASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E+ L K+V+GQ
Sbjct: 521 MM------EMKLLRNKVSDEEIAEVVSKWTGIPVSKMLEGEREKLLQMESALHKKVIGQT 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ E+++RIDM
Sbjct: 575 EAVIAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDTPEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDK--EIIKLAVMNEVKIYFRPE 610
DDGRLTD +GRT++FRNT++VMTSNLGSD+I+++ E GD + IK +VM+ V +FRPE
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVVMTSNLGSDRIQQLSEGGDANYDAIKASVMDVVGQHFRPE 754
Query: 611 FINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIY 670
FINRID+ +VF L R+ I IA +QL +L+ +L + + L + A + K+ G+D +Y
Sbjct: 755 FINRIDESVVFHPLGREQIRGIAELQLALLQRRLKERELSLTLEDAVMDKVLAAGYDPVY 814
Query: 671 GAR 673
GAR
Sbjct: 815 GAR 817
>gi|410638111|ref|ZP_11348676.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
lipolytica E3]
gi|410142308|dbj|GAC15881.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
lipolytica E3]
Length = 856
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/692 (60%), Positives = 553/692 (79%), Gaps = 15/692 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKYTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGSLVAGAKFRGEFEERLKAVLNELSKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV++
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDQ 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S+KRL LI+ E + E K+A E
Sbjct: 401 IRLQMDSKPEDMDRLERRIIQLKLEEQALSKEKDEASQKRLELIELEREQAENKFAEFEA 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK+ ++ +Q IK E+E+ +L + A R SD +S+L+YG + +LE L++ S+ +
Sbjct: 461 IWQAEKSAMQGTQHIKSELEQAKLDMEIARRASDLNRMSELQYGRIPELELKLEQASEAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LLK KV EIA+++SR TGIPV+K+++ E++KLL +E L RV+GQ
Sbjct: 521 ------QTETQLLKNKVTEIEIADVLSRWTGIPVNKMLEGEKDKLLRMEESLQNRVIGQT 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ E++++RIDM
Sbjct: 575 EAVNAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEQAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSN+GSD I++ ++ E +K VM V+ FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIIMTSNIGSDVIQDKHQESQYEEMKELVMRTVEQQFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRIDD++VF L + I +IA IQL L+ +LL+ L++S+AAL+KI+ GFD +YGA
Sbjct: 755 NRIDDVVVFHPLGLEQIKAIAKIQLLSLRQRLLEKGFKLELSQAALEKIALAGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDL 704
R + K+++ + + ++P A + GD+
Sbjct: 815 RPL---KRAIQMEI-----ENPLAQRLLAGDM 838
>gi|354724735|ref|ZP_09038950.1| protein disaggregation chaperone [Enterobacter mori LMG 25706]
Length = 857
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/699 (58%), Positives = 550/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+ H V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELRHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK--- 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q +I + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 512 ---QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQDLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSHS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSENGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|262043836|ref|ZP_06016926.1| chaperone ClpB [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|259038806|gb|EEW39987.1| chaperone ClpB [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
Length = 861
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 535/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 219 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELADKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 459 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L
Sbjct: 519 AATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQELHH 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F+++++
Sbjct: 573 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQN 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FR EFINRID+++VF L K+I SIA IQL L +L + +++IS ALK +S G+
Sbjct: 753 FRLEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQISDEALKLLSANGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|410611339|ref|ZP_11322438.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
gi|410169190|dbj|GAC36327.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
Length = 864
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/667 (61%), Positives = 534/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KY+ID+TE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTA
Sbjct: 155 EEQRDALDKYSIDVTERAEQGKLDPVIGRDDEIRRVIQVLQRRSKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+A L+AG K+RGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRLLSLDMAALIAGAKFRGEFEERLKAVLNDVARQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKD A ERRFQ
Sbjct: 275 LFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDTALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP IE+TI+ILRGL++KYEVHHGV ITD AIVAA+ LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSIEDTIAILRGLKEKYEVHHGVAITDSAIVAATLLSQRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I++EIDS PE MDKL+RRLIQLKIE EA+K+E D++SKKRL + +E+N LE++
Sbjct: 395 DEAGSRIRMEIDSMPEEMDKLDRRLIQLKIEREALKKETDDASKKRLNNLDEEVNVLELE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L++ W EK ++ Q+KEE+E+ R ++ A R SD +S+++YG + +LE L
Sbjct: 455 FSDLKETWISEKAYVQGETQVKEELEQARRELEAARRASDLTRMSEIQYGRIPELEAKLI 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ N + TLL+ KV EEIAE+VS+ TGIPVSK++ EREKLL +E L
Sbjct: 515 VVSQ------NQTKEMTLLRNKVTDEEIAEVVSKWTGIPVSKMLSGEREKLLKMEEALHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EAI+AVS++IR SR+GL+D +RP GSF+FLGPTGVGKTEL K L+ +F+ E+S
Sbjct: 569 RVIGQEEAITAVSDSIRSSRAGLADPQRPNGSFLFLGPTGVGKTELTKALAEFLFDTEDS 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
I+RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PY+++LLDE+EKA+ DVFN
Sbjct: 629 IVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYAVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I ++ + E IK V+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHLILDVAGEENYEEIKKRVLEVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+I+VF L + + IA IQLN L +L + ++ L IS + I++ GF
Sbjct: 749 FRPEFINRLDEIVVFHPLKKDQVRQIAKIQLNYLHKRLAEQDLSLDISDNVVDVIADAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|398801707|ref|ZP_10560945.1| ATP-dependent chaperone ClpB [Pantoea sp. GM01]
gi|398091391|gb|EJL81836.1| ATP-dependent chaperone ClpB [Pantoea sp. GM01]
Length = 857
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/667 (61%), Positives = 537/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IAEGLAQRIINGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERLKGVLSDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+++ E +
Sbjct: 395 DEAASSIRLQMDSKPESLDRLERRIIQLKLEQQALKKESDDASLKRLEMLESELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YAELEEEWKAEKASLTGTQNIKAELEQARLTMEQARRVGDLGQMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ EREKLL +E L
Sbjct: 515 IATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGEREKLLRMEQELHA 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLDYPEMKEVVMTVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRIDD++VF L K+I SIA IQL L ++L + L IS+AALK + G+
Sbjct: 749 FRPEFINRIDDMVVFHPLGEKHIASIAQIQLQRLYHRLEERGYQLHISEAALKLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|381196637|ref|ZP_09903979.1| ATP-dependent chaperone ClpB [Acinetobacter lwoffii WJ10621]
Length = 859
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/669 (60%), Positives = 541/669 (80%), Gaps = 10/669 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP SL K++L LD+ LLAG KYRGEFE+RLK +LK++S ++I
Sbjct: 212 IVEGLAQRIINREVPESLQGKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLSKQDGEVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQFIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D S+ + ++K+I++++ +
Sbjct: 392 DEAASRIKMELDSKPEALDKLERRLIQLKLQLEAVKKDEDAGSRAEVAHLEKQISEVQHE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ ++Q++ E+++ R+ + KA R++D +S+L+YG + +LE+ L
Sbjct: 452 YNDLEEVWKAEKTLVEGTKQVQAELDQARIALQKAQRENDLGEMSRLQYGVIPELEKRLN 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + LL+ KV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 EEEVV-----EEKEEPKLLRNKVTDNEIAEVVSAATGIPVAKMMQGEREKLLHMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQD+A+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDDAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK---EIIKLAVMNEVK 604
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ GD E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSSDVREL--GDNPLDEEVRAVVMNAVA 744
Query: 605 IYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNI 664
+FRPEFINRID+++VF L + I IA+IQL+ L+++L++ +M L + A + +
Sbjct: 745 QHFRPEFINRIDELVVFHSLKKAQIRGIADIQLDRLRDRLVEKDMRLTVDDQAFDLLIDA 804
Query: 665 GFDLIYGAR 673
GFD +YGAR
Sbjct: 805 GFDPVYGAR 813
>gi|372269569|ref|ZP_09505617.1| clpB protein [Marinobacterium stanieri S30]
Length = 858
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/667 (61%), Positives = 544/667 (81%), Gaps = 5/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KY ID+TE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EETRQALDKYCIDMTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L KK+L LD+ L+AG K+RGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKRKKVLSLDMGALIAGAKFRGEFEERLKAVLNELAKQEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K++V+EP E+TI+ILRGL+++YE+HHGV+ITD AI+AA++LS RYI+DR +PDKAIDL+
Sbjct: 335 KVIVDEPSEEDTIAILRGLKERYEIHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE+++KRL +++ I+ LE +
Sbjct: 395 DEAGSRIRMEMDSKPEEMDRLDRRLIQLKMEREALKKEKDEATRKRLAELEQTISTLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+ E++WK EK ++ SQQIKE++++ R+++ +A R D +S+L+YG++ +LE+ ++
Sbjct: 455 YADFEEVWKAEKASVQGSQQIKEQLDQARVEMEQARRAGDLAKMSELQYGKIPELEKQVQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q+ + LL+ KV EE+AE+VSR TGIPV+K+++ EREKLL +E L K
Sbjct: 515 AADSSAQQV----EEHQLLRNKVTEEEVAEVVSRWTGIPVNKMLEGEREKLLRMEEALHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F+ EE+
Sbjct: 571 RVVGQSEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKTLASFLFDTEEA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 631 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ+L+DGRLTD +GRT++FRNTI+VMTSNLGSD I+ + D ++K AVM V +
Sbjct: 691 ILLQVLEDGRLTDGQGRTVDFRNTIVVMTSNLGSDLIQNYSDDDDYNLMKSAVMEAVGTH 750
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPE INRID+++VF L ++ + IA IQL L+ +L + + +K++ A+ K+ +GF
Sbjct: 751 FRPEVINRIDEVVVFHSLRKEQVAGIAEIQLERLRRRLAERELTIKLTSTAMDKLVEVGF 810
Query: 667 DLIYGAR 673
+ IYGAR
Sbjct: 811 EPIYGAR 817
>gi|93005671|ref|YP_580108.1| ATPase AAA-2 [Psychrobacter cryohalolentis K5]
gi|92393349|gb|ABE74624.1| ATPase AAA-2 [Psychrobacter cryohalolentis K5]
Length = 865
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/669 (59%), Positives = 540/669 (80%), Gaps = 5/669 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTI+LTE+A LGKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDALNKYTINLTEQAELGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQ+IING+VP L K++L LD+ L+AG K+RGEFE+RLK +L ++S + ++I
Sbjct: 212 IVEGLAQKIINGDVPEGLRRKEVLSLDLGALIAGAKFRGEFEERLKAVLSDLSKQEGNVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDRKLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D ++ ++ +I +LE +
Sbjct: 392 DEAASRLRMEMDSKPESLGKLDSRLIQLKMQREVLKNEEDAGAQAERKVLDAQIEELEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L +IW+ EK L+K SQQ+K+E++K R+ +KA+R+ D++ +SKL+Y + +LER +
Sbjct: 452 YADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYEIMSKLQYETIPQLERRIH 511
Query: 368 EKS---QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
E QK+ N+ K LL+ KV EIAE+V+ TGIPVSK++Q ER+K+L +E
Sbjct: 512 ESDLAEQKEQTGENSGVK--LLRNKVTDNEIAEVVAAATGIPVSKMMQGERDKMLAMEEK 569
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K+L+ +F++
Sbjct: 570 LHERVIGQDEAVEAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKSLANFLFDS 629
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
E++I+RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA+ D
Sbjct: 630 EDAIVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGALTEAVRRKPYSVILFDEVEKAHPD 689
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVK 604
VFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM E IK VM+ V
Sbjct: 690 VFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMVGESYEDIKAEVMDSVG 749
Query: 605 IYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNI 664
+FRPEF+NRID+I+VF L + IA IQLN L+ +L + +D+++S A+ K+ +
Sbjct: 750 QHFRPEFVNRIDEIVVFHPLGMSQMAGIAAIQLNRLRQRLYERELDIELSAEAMNKLVAV 809
Query: 665 GFDLIYGAR 673
G+D +YGAR
Sbjct: 810 GYDPVYGAR 818
>gi|320539058|ref|ZP_08038732.1| protein disaggregation chaperone [Serratia symbiotica str. Tucson]
gi|320030898|gb|EFW12903.1| protein disaggregation chaperone [Serratia symbiotica str. Tucson]
Length = 859
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/661 (60%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L +++ + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLSDLAKQEGSVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
H M+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HIMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ E+ + E +Y+ LE+
Sbjct: 401 IRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLSSELEQKEREYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG+L +LE+ L +Q +
Sbjct: 461 EWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSELQYGKLPELEKQLAAATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
N LL+ +V EIAE+++R TGIPV+++++ ER+KLL +E L RV+GQD
Sbjct: 521 ------GNTMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDKLLRLEQELHSRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+++E+I+RIDM
Sbjct: 575 EAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDEAIVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNVLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD ++E + E +K +VM V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLVQEHFGQMSYEQMKESVMEMVSHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L++ +I I IQL L +L + ++ +++ AL+ + GFD +YGA
Sbjct: 755 NRIDEVVVFHPLSQNHIAEIVKIQLARLYKRLEERGYEVTMTEPALELLGKTGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|429085706|ref|ZP_19148669.1| ClpB protein [Cronobacter condimenti 1330]
gi|426545026|emb|CCJ74710.1| ClpB protein [Cronobacter condimenti 1330]
Length = 861
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/667 (60%), Positives = 531/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 219 IVEGLAQRIVNGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERLKGVLNDLSKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ E+ E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNDELTDKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 459 YSALEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 519 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEQDLHQ 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 573 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GA PGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGALPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQS 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +++I SIA IQL L +L ++IS AL+ + G+
Sbjct: 753 FRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAVRISDEALQLLGENGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|375256817|ref|YP_005015987.1| protein disaggregation chaperone [Klebsiella oxytoca KCTC 1686]
gi|365906295|gb|AEX01748.1| protein disaggregation chaperone [Klebsiella oxytoca KCTC 1686]
Length = 857
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/699 (58%), Positives = 548/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIKRLDMLNEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYSHMKELVLGVVSQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHLSDEALKLLSENGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|333925693|ref|YP_004499272.1| ATP-dependent chaperone ClpB [Serratia sp. AS12]
gi|333930646|ref|YP_004504224.1| ATP-dependent chaperone ClpB [Serratia plymuthica AS9]
gi|386327517|ref|YP_006023687.1| ATP-dependent chaperone ClpB [Serratia sp. AS13]
gi|421781776|ref|ZP_16218240.1| ATP-dependent chaperone protein ClpB [Serratia plymuthica A30]
gi|333472253|gb|AEF43963.1| ATP-dependent chaperone ClpB [Serratia plymuthica AS9]
gi|333489753|gb|AEF48915.1| ATP-dependent chaperone ClpB [Serratia sp. AS12]
gi|333959850|gb|AEG26623.1| ATP-dependent chaperone ClpB [Serratia sp. AS13]
gi|407756109|gb|EKF66228.1| ATP-dependent chaperone protein ClpB [Serratia plymuthica A30]
Length = 857
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/661 (60%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLSDLSKQEGSVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQKVYVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ E+ + E +Y+ LE+
Sbjct: 401 IRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLSSELEQKEREYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L +Q +
Sbjct: 461 EWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ +V EIAE+++R TGIPV+++++ ER+KLL +E L RV+GQD
Sbjct: 521 ------GKTMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDKLLRLEQELHSRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+++++++RIDM
Sbjct: 575 EAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K +VM V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVTHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L +K+I IA IQL L +L + ++ +++ AL + G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGQKHIAEIAKIQLARLYKRLEERGYEVTMTEPALALLGQTGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|17864015|gb|AAL47016.1|AF449501_1 ClpB ATP protease [Paracoccidioides brasiliensis]
Length = 792
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/667 (59%), Positives = 540/667 (80%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYT+DLTE+A GKLDPVIGRDDEIRR +QVL RR+KNNPVLIGEPGVGKTA
Sbjct: 85 EDQRDSLNKYTVDLTERALAGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEPGVGKTA 144
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 145 IVEGLAQRIVNGEVPESLKGKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 204
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 205 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 264
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 265 KVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPDKAIDLI 324
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D S+ + ++K+I ++
Sbjct: 325 DEAASRIKMELDSKPEALDKLERRLIQLKLQLEAVKKDEDAGSRAEVSHLEKQIEDVQKD 384
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ ++QI+ ++++ R+ + KA R++D +S+L+YG + +LE+ L
Sbjct: 385 YNDLEEVWKSEKTLVEGTKQIQAQLDQARIALQKAQRENDLGEMSRLQYGVIPELEKQLA 444
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ +L + LL+ KV EIAE+VS TGIPV+K++Q EREKLL +E+ L +
Sbjct: 445 QD-----ELVEEKEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLQMESFLHQ 499
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 500 RVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 559
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 560 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 619
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ + ++ ++ VM V +
Sbjct: 620 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSSDVRELGDNPSRDDVRNVVMAAVSEH 679
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L + I IA+IQL+ L+ +L ++ L + +A ++ GF
Sbjct: 680 FRPEFINRIDELVVFHALEKAQIRGIADIQLDRLRARLADRDIKLTVDDSAFDQLIEAGF 739
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 740 DPVYGAR 746
>gi|262369634|ref|ZP_06062962.1| ATP-dependent protease Hsp 100 [Acinetobacter johnsonii SH046]
gi|262315702|gb|EEY96741.1| ATP-dependent protease Hsp 100 [Acinetobacter johnsonii SH046]
Length = 859
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/669 (60%), Positives = 541/669 (80%), Gaps = 10/669 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP SL K++L LD+ LLAG KYRGEFE+RLK +LK++S ++I
Sbjct: 212 IVEGLAQRIINREVPESLQGKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLSKQDGEVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQFIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D S+ + ++K+I++++ +
Sbjct: 392 DEAASRIKMELDSKPEALDKLERRLIQLKLQLEAVKKDEDAGSRAEVAHLEKQISEVQRE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ ++Q++ E+++ R+ + KA R++D +S+L+YG + +LE+ L
Sbjct: 452 YNDLEEVWKAEKTLVEGTKQVQAELDQARIALQKAQRENDLGEMSRLQYGVIPELEKRLN 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + LL+ KV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 EEEVV-----EEKEEPKLLRNKVTDNEIAEVVSAATGIPVAKMMQGEREKLLHMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQD+A+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDDAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK---EIIKLAVMNEVK 604
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ GD E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSSDVREL--GDNPLDEEVRAVVMNAVT 744
Query: 605 IYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNI 664
+FRPEFINRID+++VF L + I IA+IQL+ L+++L++ +M L + A + +
Sbjct: 745 QHFRPEFINRIDELVVFHSLKKAQIRGIADIQLDRLRDRLVEKDMRLTVDDQAFDLLIDA 804
Query: 665 GFDLIYGAR 673
GFD +YGAR
Sbjct: 805 GFDPVYGAR 813
>gi|440757483|ref|ZP_20936668.1| ClpB protein [Pantoea agglomerans 299R]
gi|436428729|gb|ELP26381.1| ClpB protein [Pantoea agglomerans 299R]
Length = 857
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/667 (60%), Positives = 533/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPGVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEMLETELNQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG++ LE+ L
Sbjct: 455 YAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYGKIPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ E +KLL +E L
Sbjct: 515 AATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGELDKLLRMEQDLHG 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLSYPEMKDIVMGVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+++VF L K+I SIA IQL L +L + L IS A+K ++ G+
Sbjct: 749 FRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISDDAIKLLAENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|402840625|ref|ZP_10889087.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. OBRC7]
gi|423104334|ref|ZP_17092036.1| chaperone ClpB [Klebsiella oxytoca 10-5242]
gi|376382906|gb|EHS95635.1| chaperone ClpB [Klebsiella oxytoca 10-5242]
gi|402285341|gb|EJU33827.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. OBRC7]
Length = 857
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/699 (58%), Positives = 548/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIKRLDMLNEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYSHMKDLVLGVVSQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHLSDEALKLLSENGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|90022193|ref|YP_528020.1| ClpB protein [Saccharophagus degradans 2-40]
gi|89951793|gb|ABD81808.1| ATPase AAA-2 [Saccharophagus degradans 2-40]
Length = 876
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/712 (59%), Positives = 556/712 (78%), Gaps = 34/712 (4%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTVDLTARAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L E+S + II+F+DEL
Sbjct: 221 QRIINGEVPEGLKNKRLLSLDLGSLLAGAKFRGEFEERLKAVLNELSKQEGRIILFVDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V+E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVQVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P+ E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS RYI+DR +PDKAIDLIDE+A++
Sbjct: 341 PNEEDTIAILRGLKERYEVHHGVNITDSAIIAAAKLSQRYITDRQLPDKAIDLIDESASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MDKLERRLIQLKIE EA+K++ D +SK+RL I +IN++E +A+L++
Sbjct: 401 IRMEIDSKPEEMDKLERRLIQLKIEREAVKKDEDIASKERLKKIDSQINEIEKSFADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ SQ+IK +EK RL + A R D +S+L+YG + LE+ L +Q D
Sbjct: 461 IWRAEKAALQGSQEIKSHLEKARLDLEAARRAGDLGRMSELQYGIIPDLEKQLDMAAQAD 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ ++ LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+ L KRV+GQ
Sbjct: 521 M------HEMKLLRNKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDDLHKRVIGQH 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
E++ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 ESVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDSQDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL+LLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLVLLDEIEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-------------EKGDKE------- 593
+DGRLTD +GRT++FRNT++VMTSNLGS I+++ E G +E
Sbjct: 695 EDGRLTDGQGRTVDFRNTVVVMTSNLGSSAIQDIAQNKSFDTISFDNESGAEEQNQYRYQ 754
Query: 594 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 653
+K AVM V +FRPEFINRID+ +VF L ++ I IA+IQL L+ +L + ++ L +
Sbjct: 755 AMKDAVMEVVTGHFRPEFINRIDEAVVFHPLAQQQIAGIADIQLETLRKRLAERDLRLNV 814
Query: 654 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
+ + K++ GFD +YGAR + K+++ L+ ++P A I G+ I
Sbjct: 815 TPEVMAKLAEAGFDPVYGARPL---KRAIQQLV-----ENPLAQHILKGEFI 858
>gi|421464124|ref|ZP_15912817.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
WC-A-157]
gi|400206498|gb|EJO37475.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
WC-A-157]
Length = 859
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/667 (59%), Positives = 539/667 (80%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTI+LTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EEQRDSLNKYTINLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL K++L LD+ LLAG KYRGEFE+RLK +L +++ + +I
Sbjct: 212 IVEGLAQRIVNGEVPESLKDKQVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAKQEGRVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I +++ +
Sbjct: 392 DEAASRIKMELDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKSEVNYLEKQIEEVQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ +++ + E+++ R+ + KA R+ DW S+L+YG + +L++ L+
Sbjct: 452 YNDLEEVWKAEKTLVEGTKKAQVELDQARVALEKAQREGDWAEASRLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ ++ + + LL+ KV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 QD-----EVIEDHEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLHMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G E ++ VM+ V +
Sbjct: 687 ILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGASDEEMRSVVMSAVSHH 746
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID++++F L + I IA+IQL L+++L + +M L I A + + GF
Sbjct: 747 FRPEFINRIDELVIFHSLKKSQIRGIADIQLERLRSRLAERDMSLTIDDTAFDLLIDAGF 806
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 807 DPVYGAR 813
>gi|397659422|ref|YP_006500124.1| clpB protein [Klebsiella oxytoca E718]
gi|394347603|gb|AFN33724.1| ClpB protein [Klebsiella oxytoca E718]
Length = 823
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/699 (58%), Positives = 548/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 121 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 180
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 181 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 240
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 241 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 300
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 301 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 360
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 361 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIKRLDMLNEELADKERQ 420
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 421 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 480
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 481 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 534
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 535 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 594
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 595 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 654
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K V+ V
Sbjct: 655 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYSHMKELVLGVVSQS 714
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S ALK +S G+
Sbjct: 715 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHLSDEALKLLSENGY 774
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 775 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 805
>gi|387888298|ref|YP_006318596.1| ATP-dependent chaperone protein ClpB [Escherichia blattae DSM 4481]
gi|414595937|ref|ZP_11445541.1| chaperone protein ClpB [Escherichia blattae NBRC 105725]
gi|386923131|gb|AFJ46085.1| ATP-dependent chaperone protein ClpB [Escherichia blattae DSM 4481]
gi|403193094|dbj|GAB83193.1| chaperone protein ClpB [Escherichia blattae NBRC 105725]
Length = 858
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/667 (60%), Positives = 535/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+++E DE+SKKRL ++++E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALRKEADEASKKRLDMLEEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRNGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER+KLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLLRMEEQLHD 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELNYGSMKDLVLEVVSHN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +++I SIA IQL L +L + + IS AL +S GF
Sbjct: 749 FRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYKRLEERGYSVHISAEALNLLSENGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|359430144|ref|ZP_09221157.1| chaperone protein ClpB [Acinetobacter sp. NBRC 100985]
gi|358234361|dbj|GAB02696.1| chaperone protein ClpB [Acinetobacter sp. NBRC 100985]
Length = 859
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/668 (60%), Positives = 539/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP SL +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIINGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++++I + + +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDSGSKAEVNHLEQQIAEKQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++ + E+++ R + KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKAEKTLVEGDKKAQVELDQARSALEKAKREGDLAEAARLQYGVIPELQKRLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPVSK++Q EREKLLN+E L
Sbjct: 512 ---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVSKMLQGEREKLLNMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRAVVMNAVGQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L + I IA+IQL+ L+++L +M L + A + + G
Sbjct: 746 HFRPEFINRIDELVVFHSLQKAQIRGIADIQLDRLRSRLSDRDMGLTVDDTAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|89093544|ref|ZP_01166492.1| ClpB protein [Neptuniibacter caesariensis]
gi|89082234|gb|EAR61458.1| ClpB protein [Oceanospirillum sp. MED92]
Length = 859
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/667 (61%), Positives = 541/667 (81%), Gaps = 4/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L KY IDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EENRQALDKYCIDLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K +L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKLVLSLDMGALIAGAKFRGEFEERLKAVLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EPD E TI+ILRGL+++YE+HH V+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVQVDEPDEESTIAILRGLKERYEIHHSVDITDSAIIAAAKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKPE MD+LERRLIQLK+E EA+K+E D ++K+RL ++ I +E +
Sbjct: 395 DEAASRIRMEMDSKPEDMDRLERRLIQLKMEREALKKEKDAAAKQRLAELESTIQSIEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L+++WK EK ++ SQQIKEE++ R+++ K TR D Q +S+L+YG K+ + K
Sbjct: 455 FSDLDEVWKAEKVALQGSQQIKEELDLARIELEKFTRAGDLQKMSELQYG---KIPELEK 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + LL+ KV EE+AE+VSR TGIPVSK+++ ER+KLL +E+ L
Sbjct: 512 KLAAAAEAEESGQQEMKLLRNKVTEEEVAEVVSRWTGIPVSKMLEGERDKLLRMESTLHN 571
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA++AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L++ +F+ EE+
Sbjct: 572 RVVGQEEAVTAVSNAVRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALASFLFDTEEA 631
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 632 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFN 691
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ+L+DGRLTD +GRT++FRNTI+VMTSNLGSD I+ + D +++ AVM V ++
Sbjct: 692 ILLQVLEDGRLTDGQGRTVDFRNTIVVMTSNLGSDLIQNFSDDDDYQLMHNAVMEAVGVH 751
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPE INRID+++VF L + + IA IQL L+++L + + L ++ A+ K+ ++GF
Sbjct: 752 FRPEVINRIDEVVVFHSLQKSQVAGIAKIQLQRLQSRLAERELSLTLTSTAMDKLVDVGF 811
Query: 667 DLIYGAR 673
+ IYGAR
Sbjct: 812 EPIYGAR 818
>gi|291618563|ref|YP_003521305.1| ClpB [Pantoea ananatis LMG 20103]
gi|291153593|gb|ADD78177.1| ClpB [Pantoea ananatis LMG 20103]
Length = 861
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/667 (61%), Positives = 534/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 219 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 399 DEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVKRLDMLEAELNQKERE 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG++ LE+ L
Sbjct: 459 YAELEEEWKAEKASLTGTQNIKAELEQARLTLEQARRSGDLAQMSELQYGKIPALEKQLA 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 519 SATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHS 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+++++
Sbjct: 573 RVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTELCKSLANFLFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + +K VM V +
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLNYPEMKNLVMGVVGQH 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+++VF L K+I SIA IQL L +L L IS AA+K + G+
Sbjct: 753 FRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQLHISDAAIKLLGENGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|255319673|ref|ZP_05360882.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
SK82]
gi|262378533|ref|ZP_06071690.1| ATP-dependent chaperone ClpB [Acinetobacter radioresistens SH164]
gi|255303290|gb|EET82498.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
SK82]
gi|262299818|gb|EEY87730.1| ATP-dependent chaperone ClpB [Acinetobacter radioresistens SH164]
Length = 859
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/667 (59%), Positives = 539/667 (80%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTI+LTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EEQRDSLNKYTINLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL K++L LD+ LLAG KYRGEFE+RLK +L +++ + +I
Sbjct: 212 IVEGLAQRIVNGEVPESLKDKQVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAKQEGRVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I +++ +
Sbjct: 392 DEAASRIKMELDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKSEVNYLEKQIEEVQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++WK EKTL++ +++ + E+++ R+ + KA R+ DW S+L+YG + +L++ L+
Sbjct: 452 YNDLEEVWKAEKTLVEGTKKAQVELDQARVALEKAQREGDWAEASRLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ ++ + + LL+ KV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 QD-----EVIEDHEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLHMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G E ++ VM+ V +
Sbjct: 687 ILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGASDEEMRSVVMSAVSHH 746
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID++++F L + I IA+IQL L+++L + +M L I A + + GF
Sbjct: 747 FRPEFINRIDELVIFHSLKKSQIRGIADIQLERLRSRLAERDMSLTIDDTAFDLLIDAGF 806
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 807 DPVYGAR 813
>gi|386016866|ref|YP_005935161.1| chaperone ClpB [Pantoea ananatis AJ13355]
gi|327394943|dbj|BAK12365.1| chaperone ClpB [Pantoea ananatis AJ13355]
Length = 861
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/667 (61%), Positives = 534/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 219 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 339 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 399 DEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVKRLDMLEAELNQKERE 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG++ LE+ L
Sbjct: 459 YAELEEEWKAEKASLTGTQNIKAELEQARLTLEQARRSGDLAQMSELQYGKIPALEKQLA 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 519 SATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHS 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+++++
Sbjct: 573 RVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTELCKSLANFLFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + +K VM V +
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLNYPEMKNLVMGVVGQH 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+++VF L K+I SIA IQL L +L L IS AA+K + G+
Sbjct: 753 FRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQLHISDAAIKLLGENGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|423125257|ref|ZP_17112936.1| chaperone ClpB [Klebsiella oxytoca 10-5250]
gi|376399224|gb|EHT11842.1| chaperone ClpB [Klebsiella oxytoca 10-5250]
Length = 857
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/699 (58%), Positives = 548/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIKRLDMLNEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYSHMKDLVLGVVSQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHLSDEALKLLSENGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|262372812|ref|ZP_06066091.1| ATP-dependent chaperone ClpB [Acinetobacter junii SH205]
gi|262312837|gb|EEY93922.1| ATP-dependent chaperone ClpB [Acinetobacter junii SH205]
Length = 859
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/668 (60%), Positives = 540/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP SL +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIINGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++++I + + +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVNHLEQQIAEKQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++ + E+++ R+ + KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKAEKTLVEGDKKAQVELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPVSK++Q EREKLLN+E L
Sbjct: 512 ---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVSKMLQGEREKLLNMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VM+ V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTVVMSAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+++L +M L + A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLQKAQIRGIADIQLDRLRSRLSDRDMGLTVDDTAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD IYGAR
Sbjct: 806 FDPIYGAR 813
>gi|378581052|ref|ZP_09829702.1| protein disaggregation chaperone [Pantoea stewartii subsp.
stewartii DC283]
gi|377816131|gb|EHT99236.1| protein disaggregation chaperone [Pantoea stewartii subsp.
stewartii DC283]
Length = 857
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/667 (60%), Positives = 535/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 395 DEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVKRLEMLEAELNQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE+ WK EK + +Q IK E+E+ RL++ +A R D +S+L+YG++ LE+ L
Sbjct: 455 YAELEEEWKAEKASLTGTQNIKAELEQARLQLEQARRSGDLAQMSELQYGKIPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 SATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTELCKSLANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLNYAEMKGVVMGVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+++VF L K+I SIA IQL L +L L IS AA+K + G+
Sbjct: 749 FRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQLHISDAAIKLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|378765994|ref|YP_005194455.1| ATP-dependent chaperone ClpB [Pantoea ananatis LMG 5342]
gi|386078251|ref|YP_005991776.1| Chaperone protein clpB [Pantoea ananatis PA13]
gi|354987432|gb|AER31556.1| Chaperone protein clpB [Pantoea ananatis PA13]
gi|365185468|emb|CCF08418.1| ATP-dependent chaperone ClpB [Pantoea ananatis LMG 5342]
Length = 857
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/667 (61%), Positives = 534/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 395 DEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVKRLDMLEAELNQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG++ LE+ L
Sbjct: 455 YAELEEEWKAEKASLTGTQNIKAELEQARLTLEQARRSGDLAQMSELQYGKIPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 SATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTELCKSLANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLNYPEMKNLVMGVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+++VF L K+I SIA IQL L +L L IS AA+K + G+
Sbjct: 749 FRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQLHISDAAIKLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|407794890|ref|ZP_11141910.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina xiamenensis 10-D-4]
gi|407210650|gb|EKE80528.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina xiamenensis 10-D-4]
Length = 857
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/703 (59%), Positives = 552/703 (78%), Gaps = 15/703 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIG+PGVGKTA
Sbjct: 155 EEQRQALDKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGDPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGALLAGAKFRGEFEERLKAVLNELSKEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP + +TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVLVDEPTVADTIAILRGLKERYELHHAVEITDPAIVAAASLSHRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I+++IDSKPE +D+LERR+IQLK+E +A+++E D++SKKRL L+++E+++ E K
Sbjct: 395 DEAGSRIRMQIDSKPEDLDRLERRIIQLKLEQQALQKEKDDASKKRLDLLQEELDEQERK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ LE++W EK ++ +Q IK ++E+ R ++ A R D +S+L+YG + LER
Sbjct: 455 FKELEEVWNTEKAAVQGTQNIKAQLEQARTDMDIARRAGDLNRMSELQYGRIPALER--- 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q D+ L +LLK +V EE+AE++SR TGIPV+K+++ EREKLL +E L
Sbjct: 512 ---QLDLALQAEMQDMSLLKNRVTDEEVAEVLSRWTGIPVNKMLEGEREKLLQMEQQLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+ + +
Sbjct: 569 RVVGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELSKALAQFLFDTDSA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E + E +K AVM+ + +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQEKANEHTYEEMKAAVMDVLVHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D+ +VF L++ NI IA IQL L +L + + L++ AAL I++ GF
Sbjct: 749 FRPEFLNRVDETVVFHPLSKANIKHIAEIQLQNLLQRLQERDYQLQLDDAALALIADAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 709
D +YGAR + K+++ L ++P A I G+L P
Sbjct: 809 DPVYGARPL---KRAIQQQL-----ENPLAQRILAGELTPDKP 843
>gi|448240622|ref|YP_007404675.1| protein disaggregation chaperone [Serratia marcescens WW4]
gi|445210986|gb|AGE16656.1| protein disaggregation chaperone [Serratia marcescens WW4]
gi|453064614|gb|EMF05578.1| protein disaggregation chaperone [Serratia marcescens VGH107]
Length = 857
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/661 (60%), Positives = 536/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L +++ + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLAKQEGSVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ E+ + E +Y+ LE+
Sbjct: 401 IRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLSDELGQKEREYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L +Q +
Sbjct: 461 EWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ +V EIAE+++R TGIPV+++++ ER+KLL +E L RV+GQD
Sbjct: 521 ------GKSMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDKLLRLEQELHSRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+++++++RIDM
Sbjct: 575 EAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K +VM V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVSHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L K+I +IA IQL+ L +L + ++ +++ AL +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEKHIAAIAKIQLSRLYKRLEERGYEVTMTEPALALLSKTGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|423109769|ref|ZP_17097464.1| chaperone ClpB [Klebsiella oxytoca 10-5243]
gi|376381138|gb|EHS93877.1| chaperone ClpB [Klebsiella oxytoca 10-5243]
Length = 857
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/699 (58%), Positives = 548/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDDASIKRLDMLNEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQDLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYGHMKEMVLGVVSQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHMSDEALKLLSENGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|329297088|ref|ZP_08254424.1| protein disaggregation chaperone [Plautia stali symbiont]
Length = 857
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/667 (61%), Positives = 535/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+ + E +
Sbjct: 395 DEAASSIRLQIDSKPEPLDRLERRIIQLKLEQQALKKESDDASVKRLEMLESELAQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YAELEEEWKAEKASLTGTQNIKAELEQARLAMEQARRVGDLGQMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 SATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHA 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGYIGYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYIGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K V+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYAEMKDVVITVVGHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + L I AALK + G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYQRLEERGYQLHICDAALKLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|365847002|ref|ZP_09387499.1| ATP-dependent chaperone protein ClpB [Yokenella regensburgei ATCC
43003]
gi|364573153|gb|EHM50666.1| ATP-dependent chaperone protein ClpB [Yokenella regensburgei ATCC
43003]
Length = 861
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/667 (59%), Positives = 538/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 159 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 219 IVEGLAQRIVNGEVPEGLKGRRVLSLDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 279 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 339 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+KRL ++ +E++ E +
Sbjct: 399 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASRKRLDMLNEELDDKERQ 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 459 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLA 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L +
Sbjct: 519 SATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMESERDKLLRMEQDLHQ 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 573 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 633 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSHS 752
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA+IQL L +L + ++ IS ALK +S G+
Sbjct: 753 FRPEFINRIDEVVVFHPLGEKHIASIASIQLQRLYKRLEERGYEVHISDDALKLLSENGY 812
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 813 DPVYGAR 819
>gi|212712900|ref|ZP_03321028.1| hypothetical protein PROVALCAL_03997 [Providencia alcalifaciens DSM
30120]
gi|422019412|ref|ZP_16365960.1| protein disaggregation chaperone [Providencia alcalifaciens Dmel2]
gi|212684445|gb|EEB43973.1| hypothetical protein PROVALCAL_03997 [Providencia alcalifaciens DSM
30120]
gi|414103251|gb|EKT64829.1| protein disaggregation chaperone [Providencia alcalifaciens Dmel2]
Length = 857
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/708 (59%), Positives = 556/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++++E+ + E +
Sbjct: 395 DEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLEEELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E R+++ KA R D +S+L+YG + +LE+ L+
Sbjct: 455 YSALEEEWKAEKASLTGTQHIKAELENTRIEMEKARRNGDLAKMSELQYGRIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + LL+ KV EIAEI++R TGIPVS++++ EREKLL +E L +
Sbjct: 515 AATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREKLLRMEQQLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIGYSE-MKDMVMEVVAH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L ++ I +IANIQL L +L + ++ + AAL+KI G
Sbjct: 748 NFRPEFINRIDEVVVFHPLGKEQITNIANIQLARLYKRLEEHGYEVTATAAALEKIGEAG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD I+GAR + K+++ + ++P A I G LI P +LD
Sbjct: 808 FDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPITLD 847
>gi|293392742|ref|ZP_06637060.1| chaperone protein ClpB [Serratia odorifera DSM 4582]
gi|291424601|gb|EFE97812.1| chaperone protein ClpB [Serratia odorifera DSM 4582]
Length = 857
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/701 (57%), Positives = 551/701 (78%), Gaps = 15/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L +++ + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLSDLAKQEGSVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL ++ E+ + E +Y+ LE+
Sbjct: 401 IRMQMDSKPEALDRLERRVIQLKLEQQALNKESDDASRKRLEMLSSELEQKEREYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L +Q +
Sbjct: 461 EWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ +V EIAE++++ TGIPV+++++ ER+KLL +E L RV+GQD
Sbjct: 521 ------GKTMKLLRNRVTDAEIAEVLAKATGIPVARMLEGERDKLLRLEQELHSRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+++++++RIDM
Sbjct: 575 EAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K +VM V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVSHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L +++I IA IQL L +L + + I++ AL + G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGQQHIAEIAKIQLARLYQRLEERGYAVTITEPALTLLGKTGYDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
R + K+++ + ++P A I G L+ P +LD
Sbjct: 815 RPL---KRAIQQEI-----ENPLAQQILSGALVPGKPVTLD 847
>gi|157369131|ref|YP_001477120.1| protein disaggregation chaperone [Serratia proteamaculans 568]
gi|157320895|gb|ABV39992.1| ATPase AAA-2 domain protein [Serratia proteamaculans 568]
Length = 857
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/661 (60%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKAVLSDLSKQEGSVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ E+ + E +Y+ LE+
Sbjct: 401 IRMQMDSKPESLDRLERRIIQLKLEQQALSKESDDASKKRLEMLSGELEQKEREYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L + +
Sbjct: 461 EWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATLAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ +V EIAE+++R TGIPV+++++ ER+KLL +E L RV+GQD
Sbjct: 521 ------GKTMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDKLLRLEQELHSRVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+++++++RIDM
Sbjct: 575 EAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K +VM V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVTHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L +K+I IA IQL L +L + ++ +++ AL+ + GFD +YGA
Sbjct: 755 NRIDEVVVFHPLGQKHIAEIAKIQLARLYKRLEERGYEVTMTEPALELLGKTGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|440286532|ref|YP_007339297.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium strain
FGI 57]
gi|440046054|gb|AGB77112.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium strain
FGI 57]
Length = 857
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/667 (60%), Positives = 532/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELEDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNRVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQDLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +I SIA IQL L +L + + +IS AL +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEAHIASIAQIQLQRLYKRLEERGYETQISDEALHLLSKNGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|312881919|ref|ZP_07741682.1| clpB protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370437|gb|EFP97926.1| clpB protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 858
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/661 (60%), Positives = 531/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + ++I+FIDE+
Sbjct: 221 QRIVNDEVPEGLRRRRVLSLDMGALVAGAKYRGEFEERLKSVLSELSKEEGNVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK++V+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +DKLER++IQLKIE +A+ E+D +S+KRL+ + +E+ E ++ LE+
Sbjct: 401 IRLQMDSKPESLDKLERKIIQLKIEQQALTNEHDGASEKRLINLNQELVDKERAFSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LER L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKTELEQARMDMEFARRAGDLNRMSELQYGRIPELERQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLLK KV EIA+++S+ TGIPVSK+++ E+ KLL +E +L RV+GQ
Sbjct: 521 MQ------EMTLLKNKVSDNEIADVLSKQTGIPVSKMLEAEKVKLLRMEEVLHDRVIGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E +++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFLFDSETAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + + +K VM V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQEGFATTNYQQMKEKVMEVVGKHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L++ +I +IA IQL L ++ L+IS+ A I+ +GFD IYGA
Sbjct: 755 NRVDESVVFHPLSQDDIKAIALIQLAKLSERMKDNGYVLEISEQASDLIAQVGFDPIYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|406979232|gb|EKE01059.1| hypothetical protein ACD_21C00227G0001 [uncultured bacterium]
Length = 867
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/660 (61%), Positives = 543/660 (82%), Gaps = 6/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTID T +A GK+DPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI+EGLA
Sbjct: 160 LEKYTIDFTARASQGKMDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIIEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP+ L +K +L LD+ L+AGTK+RGEFE+RLK ++ EI + II+FIDEL
Sbjct: 220 QRIINGEVPDGLKNKLVLALDMGTLIAGTKFRGEFEERLKSVINEIVKAEGQIILFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
H ++G GK EGS+DAGNMLKP L+RGEL CIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HMVVGAGKAEGSMDAGNMLKPALARGELRCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P + +TI+ILRGL++KYEVHHGV+I+D AIVAA+ LS+RYI+DR +PDKAIDLIDEAA++
Sbjct: 340 PSVTDTIAILRGLKEKYEVHHGVDISDSAIVAAATLSHRYITDRNLPDKAIDLIDEAASR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKPE +D+L R++IQLKIE EA+K+E DE+SK+RL+ ++K+++ LE +Y++L++
Sbjct: 400 IRMEMDSKPEDLDRLNRKIIQLKIEREALKKETDEASKQRLVDLEKQLSGLEKEYSSLDE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK ++ Q+IKE++++ +L++ A RK D +S+L+YG++ LE+ L+ Q +
Sbjct: 460 VWKKEKATVQSEQKIKEDLDQAKLELEAAQRKMDLAKMSELQYGKIPALEKQLQAALQAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
++ L++ KV EE+AE+VS+ T IPVSK+++ E+EKLL++E+ L KRV+GQD
Sbjct: 520 ------KSEMHLVRNKVTEEEVAEVVSKWTHIPVSKMLEGEKEKLLHMEDALHKRVIGQD 573
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV++AIRRSR+GL+D +P GSFMFLGPTGVGKTE CKTL+ +F+ E+++IRIDM
Sbjct: 574 EAVKAVADAIRRSRAGLADPNKPIGSFMFLGPTGVGKTETCKTLAEFLFDTEDAMIRIDM 633
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RRKPY++ILLDEIEKA+ DVFNILLQ+L
Sbjct: 634 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRKPYAVILLDEIEKAHPDVFNILLQVL 693
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRN +IVMTSNLGS I+E K + IK AVM V +FRPEFIN
Sbjct: 694 DDGRLTDGQGRTVDFRNCVIVMTSNLGSQYIQEFAKDGYDKIKKAVMEAVSKHFRPEFIN 753
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
R+DDI+VF L+ K I IANIQ+ L+ +L + ++ +++S AL ++ GFD +YGAR
Sbjct: 754 RVDDIVVFHGLDSKQIHKIANIQIERLQKRLAERDLQIEVSDKALDYLAEAGFDPVYGAR 813
>gi|406941815|gb|EKD74201.1| hypothetical protein ACD_45C00035G0005 [uncultured bacterium]
Length = 862
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/661 (60%), Positives = 536/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLT +A GKLDPVIGRD EIRR IQVL RR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTARAEQGKLDPVIGRDAEIRRTIQVLLRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ + II+FIDEL
Sbjct: 221 QRIVNGEVPEGLQDKRLLALDLGALIAGAKFRGEFEERLKAVLNDLAKQEGQIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ+ILV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQRILVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P + +TI+ILRGL+++YE+HHGVE+TD A+VAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVPDTIAILRGLKERYELHHGVEMTDSALVAAATLSHRYISDRQLPDKAIDLIDEAASN 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE +D L+R+++QLKIE EA+K+E D++SKKRL ++K++ K + + LE
Sbjct: 401 IRMEIDSKPEELDNLDRKIVQLKIEREALKKETDDASKKRLEKLEKDLQKWQSESDKLES 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK+ ++ +Q IK E+E+ RL+ A R D +++L+YG++ +LE+ L S +
Sbjct: 461 IWKSEKSALQGAQTIKGELERARLEFETARRAGDLTRMAELQYGQIPELEKKLATASLAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + LL++KV EEIAE+VS+ T IPV+K+++ E+EKLL +E+ L KR++GQ
Sbjct: 521 KQ------ETQLLRSKVTEEEIAEVVSKWTHIPVAKMLESEKEKLLKMEDALHKRIIGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
+A++A+ NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+A +F+ EE+++RIDM
Sbjct: 575 QAVTAICNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAAFLFDTEEAVVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH+++RL+GAPPGY+GYEEGGYLTE+VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVARLVGAPPGYVGYEEGGYLTELVRRKPYSVVLLDEMEKAHHDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD+ GRT++FRNTIIVMTSNLGS+ I+++ + GD +K AV+ V +FRPEF+
Sbjct: 695 DDGRLTDSHGRTVDFRNTIIVMTSNLGSELIQDIAQHGDYFEMKNAVLKVVGQHFRPEFM 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L+++ I IA+IQ L+ +L + L ++ AL +++ G+D +YGA
Sbjct: 755 NRIDETVVFHPLDKEQIKDIADIQFQRLRMRLAEKEYGLTVTNEALDYLASTGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|383817288|ref|ZP_09972664.1| protein disaggregation chaperone [Serratia sp. M24T3]
gi|383293843|gb|EIC82201.1| protein disaggregation chaperone [Serratia sp. M24T3]
Length = 857
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/701 (57%), Positives = 549/701 (78%), Gaps = 15/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL ++ E+ + E +Y+ L++
Sbjct: 401 IRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASIKRLEMLNTELEQKEREYSGLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK ++E+ ++ + +A R D +S+L+YG++ +LE+ L +Q +
Sbjct: 461 EWKAEKASLTGTQNIKADLEQAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ +V EIA++++R TGIPV+++++ EREKLL +E+ L KRV+GQ+
Sbjct: 521 ------GKTMKLLRNRVTDVEIADVLARWTGIPVARMLESEREKLLRMEDDLHKRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +FN++++++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFNSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I++ + +K +VM V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDVIQQHFGEATYAQMKESVMEVVTNNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L +I IA IQL L +L + ++ AAL+ + N GFD +YGA
Sbjct: 755 NRIDEVVVFHPLGHAHIKHIAEIQLQRLYKRLEERGYSAHLTDAALELLGNTGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
R + K+++ + ++P A I G LI P ++D
Sbjct: 815 RPL---KRAIQQEI-----ENPLAQQILSGKLIPGKPITID 847
>gi|383936980|ref|ZP_09990396.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rheinheimera
nanhaiensis E407-8]
gi|383701961|dbj|GAB60487.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rheinheimera
nanhaiensis E407-8]
Length = 858
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/701 (57%), Positives = 552/701 (78%), Gaps = 15/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LTKYTVDLTARAEAGKLDPVIGRDEEIRRCIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
RI+N EVP L K++L LD+ LLAG KYRGEFE+RLK +L E++ + +I+FIDE+
Sbjct: 221 LRIVNKEVPEGLKDKRVLSLDMGSLLAGAKYRGEFEERLKAVLNELAKEEGQVILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E A+ +E DE++KKR +I+++I +L+ KY L++
Sbjct: 401 IRMQMDSKPEELDRLERRIIQLKLEDNALAKETDEATKKRRDMIQEQIRELDAKYNELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W+ EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LE+ L SQ +
Sbjct: 461 VWESEKAALQGTQNIKTELEQARLDLEVARRASDLQRMSELQYGRIPELEKKLDLASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ ++ TLL+ KV +EIA+++S+ TGIPVSK+++ ER+KLL +E L +V+GQD
Sbjct: 521 M------HENTLLRNKVTEQEIADVLSKATGIPVSKMLEGERDKLLRMEQALHDKVIGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVS+AIRRSR+ L+D +P GSF+FLGPTGVGKTEL K+L+ +F++ ++++RIDM
Sbjct: 575 EAVTAVSHAIRRSRACLADPNKPIGSFLFLGPTGVGKTELTKSLANFLFDSPDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + +K +M + FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDLIQEHYREYSYSQMKEMLMGVLSKQFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L+ + I SIA IQL L+ +L + IS AAL K++ +GFD +YGA
Sbjct: 755 NRLDETVVFHPLDSRQIRSIARIQLARLEQRLAERQYQFSISDAALDKLAEVGFDPLYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
R + K+++ + H ++P A + GD+ +LD
Sbjct: 815 RPL---KRAI-----QQHLENPLAQALLQGDVPPGSTVALD 847
>gi|261346206|ref|ZP_05973850.1| ATP-dependent chaperone protein ClpB [Providencia rustigianii DSM
4541]
gi|282565512|gb|EFB71047.1| ATP-dependent chaperone protein ClpB [Providencia rustigianii DSM
4541]
Length = 857
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/707 (58%), Positives = 555/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++++E+ + E +
Sbjct: 395 DEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLEEELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ L++ WK EK + +Q IK E+E R+++ KA R D +S+L+YG + +LE+ L+
Sbjct: 455 YSALDEEWKAEKASLTGTQHIKAELENTRIEMEKARRMGDLAKMSELQYGRIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + LL+ KV EIAEI++R TGIPVS++++ EREKLL +E L +
Sbjct: 515 AATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREKLLRMEQQLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E D +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIDYSEMKNMVMEVVSHN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++ I +IANIQL L +L + ++ + AAL+KI GF
Sbjct: 749 FRPEFINRIDEVVVFHPLGKEQIANIANIQLARLYKRLEEHGYEVTATAAALEKIGEAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D I+GAR + K+++ + ++P A I G LI P +LD
Sbjct: 809 DPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPITLD 847
>gi|337755940|ref|YP_004648451.1| ClpB protein [Francisella sp. TX077308]
gi|336447545|gb|AEI36851.1| ClpB protein [Francisella sp. TX077308]
Length = 860
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/666 (60%), Positives = 541/666 (81%), Gaps = 4/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G L KYT+DLT+ A+ GK+DP+IGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDMKGALDKYTVDLTDLAKKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIIN EVP + KK+L LD+ LLAG K+RG+FE+RLK +LKE++ ++I
Sbjct: 215 IVEGLAQRIINNEVPEGIKGKKVLSLDMGALLAGAKFRGDFEERLKSVLKELAKQDGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKSEGSMDAGNMLKPALARGELKCVGATTLDEYREYVEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYISDR +PDKAIDL+
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYISDRQLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA ++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KKRL ++K+EI LE +
Sbjct: 395 DEAGSQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKKRLEILKEEIKGLESE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y E++WK EK ++ + ++KE++EK + ++ K R D +S+L+YG + +LE +K
Sbjct: 455 YKGFEELWKAEKLKMQGASKLKEKLEKAKFELEKYQRSGDLTKMSELQYGVIPELETQIK 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + + N L++T V EIA++VS+ TGIPVSK+++ E+EKLLN+E+ L K
Sbjct: 515 QIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEEEKEKLLNMESFLHK 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L+ +F+++++
Sbjct: 571 RVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDQDA 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE+EKA++DVFN
Sbjct: 631 MLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS KI+EM+ D E +K AVM V +F
Sbjct: 691 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHKIQEMQDQDYETVKSAVMEMVLSHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NR+DD IVF LN++ I IA IQ+ L+ +L + + L+++ A+ K+++ GFD
Sbjct: 751 RPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLTDLEIALEVTPNAIDKLADAGFD 810
Query: 668 LIYGAR 673
++GAR
Sbjct: 811 PVFGAR 816
>gi|398795524|ref|ZP_10555375.1| ATP-dependent chaperone ClpB [Pantoea sp. YR343]
gi|398206177|gb|EJM92948.1| ATP-dependent chaperone ClpB [Pantoea sp. YR343]
Length = 857
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/667 (61%), Positives = 534/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IAEGLAQRIINGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERLKGVLSDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+++ E +
Sbjct: 395 DEAASSIRLQMDSKPESLDRLERRIIQLKLEQQALKKESDDASVKRLEMLESELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YAELEEEWKAEKASLTGTQNIKAELEQARLTMEQARRVGDLGQMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 IATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLDYAEMKEVVMTVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRIDD++VF L K+I SIA IQL L +L + L IS ALK + G+
Sbjct: 749 FRPEFINRIDDMVVFHPLGEKHIASIAQIQLQRLYKRLEERGYQLHISDEALKLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|22124822|ref|NP_668245.1| protein disaggregation chaperone [Yersinia pestis KIM10+]
gi|45440507|ref|NP_992046.1| protein disaggregation chaperone [Yersinia pestis biovar Microtus
str. 91001]
gi|21957649|gb|AAM84496.1|AE013694_1 heat shock protein [Yersinia pestis KIM10+]
gi|45435364|gb|AAS60923.1| Clp ATPase [Yersinia pestis biovar Microtus str. 91001]
Length = 864
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/707 (58%), Positives = 556/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 162 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 221
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 222 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLNDLSKQEGSVI 281
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 282 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 341
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 342 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 401
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 402 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 461
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG + +LE+ L
Sbjct: 462 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGTIPELEKQLA 521
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V E+AE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 522 AATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLESERDKLLRMEQDLHQ 575
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 576 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 635
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 636 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 695
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM+ V +
Sbjct: 696 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHH 755
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L R ++ SIANIQL L +L + ++KI++ AL+ + GF
Sbjct: 756 FRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGF 815
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K+++ ++I ++P A I G LI P +LD
Sbjct: 816 DPVYGARPL---KRAIQ---QEI--ENPLAQQILSGKLIPGIPVTLD 854
>gi|384123457|ref|YP_005506077.1| Clp ATPase [Yersinia pestis D106004]
gi|262363053|gb|ACY59774.1| Clp ATPase [Yersinia pestis D106004]
Length = 733
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/701 (58%), Positives = 552/701 (78%), Gaps = 15/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 37 LKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 96
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I+FIDEL
Sbjct: 97 QRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLNDLSKQEGSVILFIDEL 156
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 157 HTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAE 216
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA +
Sbjct: 217 PTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAGSS 276
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +Y+ LE+
Sbjct: 277 IRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKEREYSELEE 336
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG + +LE+ L + +
Sbjct: 337 EWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGTIPELEKQLAAATALE 396
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ +V E+AE+++R TGIPVS++++ ER+KLL +E L +RV+GQD
Sbjct: 397 ------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLESERDKLLRMEQDLHQRVIGQD 450
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 451 EAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDM 510
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 511 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 570
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM+ V +FRPEFI
Sbjct: 571 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHHFRPEFI 630
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L R ++ SIANIQL L +L + ++KI++ AL+ + GFD +YGA
Sbjct: 631 NRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGA 690
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
R + K+++ + ++P A I G LI P +LD
Sbjct: 691 RPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVTLD 723
>gi|51595198|ref|YP_069389.1| protein disaggregation chaperone [Yersinia pseudotuberculosis IP
32953]
gi|108808757|ref|YP_652673.1| protein disaggregation chaperone [Yersinia pestis Antiqua]
gi|108810986|ref|YP_646753.1| protein disaggregation chaperone [Yersinia pestis Nepal516]
gi|145600170|ref|YP_001164246.1| protein disaggregation chaperone [Yersinia pestis Pestoides F]
gi|153947726|ref|YP_001402169.1| protein disaggregation chaperone [Yersinia pseudotuberculosis IP
31758]
gi|153997675|ref|ZP_02022775.1| Clp ATPase [Yersinia pestis CA88-4125]
gi|162419640|ref|YP_001607805.1| protein disaggregation chaperone [Yersinia pestis Angola]
gi|165926588|ref|ZP_02222420.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. F1991016]
gi|166009977|ref|ZP_02230875.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213111|ref|ZP_02239146.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399363|ref|ZP_02304887.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421665|ref|ZP_02313418.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167423529|ref|ZP_02315282.1| chaperone ClpB [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167470275|ref|ZP_02334979.1| protein disaggregation chaperone [Yersinia pestis FV-1]
gi|170025564|ref|YP_001722069.1| protein disaggregation chaperone [Yersinia pseudotuberculosis
YPIII]
gi|186894216|ref|YP_001871328.1| protein disaggregation chaperone [Yersinia pseudotuberculosis
PB1/+]
gi|229838891|ref|ZP_04459050.1| Clp ATPase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896559|ref|ZP_04511726.1| Clp ATPase [Yersinia pestis Pestoides A]
gi|229899458|ref|ZP_04514601.1| Clp ATPase [Yersinia pestis biovar Orientalis str. India 195]
gi|229901202|ref|ZP_04516325.1| Clp ATPase [Yersinia pestis Nepal516]
gi|270489387|ref|ZP_06206461.1| ATP-dependent chaperone protein ClpB [Yersinia pestis KIM D27]
gi|294504989|ref|YP_003569051.1| Clp ATPase [Yersinia pestis Z176003]
gi|384127314|ref|YP_005509928.1| Clp ATPase [Yersinia pestis D182038]
gi|384138885|ref|YP_005521587.1| protein disaggregation chaperone [Yersinia pestis A1122]
gi|384415963|ref|YP_005625325.1| Clp ATPase [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|420548363|ref|ZP_15046177.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-01]
gi|420553708|ref|ZP_15050949.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-02]
gi|420559314|ref|ZP_15055821.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-03]
gi|420564702|ref|ZP_15060658.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-04]
gi|420569749|ref|ZP_15065242.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-05]
gi|420575407|ref|ZP_15070361.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-06]
gi|420580714|ref|ZP_15075187.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-07]
gi|420586076|ref|ZP_15080044.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-08]
gi|420591186|ref|ZP_15084638.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-09]
gi|420596572|ref|ZP_15089481.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-10]
gi|420607664|ref|ZP_15099430.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-12]
gi|420613051|ref|ZP_15104260.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-13]
gi|420618438|ref|ZP_15108953.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-14]
gi|420623734|ref|ZP_15113729.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-15]
gi|420628814|ref|ZP_15118338.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-16]
gi|420633939|ref|ZP_15122930.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-19]
gi|420639152|ref|ZP_15127623.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-25]
gi|420644612|ref|ZP_15132606.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-29]
gi|420649905|ref|ZP_15137388.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-32]
gi|420655541|ref|ZP_15142452.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-34]
gi|420661053|ref|ZP_15147383.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-36]
gi|420666330|ref|ZP_15152136.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-42]
gi|420671193|ref|ZP_15156570.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-45]
gi|420676540|ref|ZP_15161430.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-46]
gi|420682170|ref|ZP_15166514.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-47]
gi|420687501|ref|ZP_15171252.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-48]
gi|420692731|ref|ZP_15175841.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-52]
gi|420698491|ref|ZP_15180908.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-53]
gi|420704343|ref|ZP_15185556.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-54]
gi|420709667|ref|ZP_15190294.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-55]
gi|420715143|ref|ZP_15195157.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-56]
gi|420720653|ref|ZP_15199880.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-58]
gi|420726119|ref|ZP_15204693.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-59]
gi|420731705|ref|ZP_15209713.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-60]
gi|420736721|ref|ZP_15214245.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-61]
gi|420742197|ref|ZP_15219166.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-63]
gi|420753353|ref|ZP_15228856.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-65]
gi|420759153|ref|ZP_15233516.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-66]
gi|420764404|ref|ZP_15238135.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-71]
gi|420769637|ref|ZP_15242829.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-72]
gi|420774617|ref|ZP_15247339.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-76]
gi|420780234|ref|ZP_15252283.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-88]
gi|420785835|ref|ZP_15257175.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-89]
gi|420790971|ref|ZP_15261792.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-90]
gi|420796494|ref|ZP_15266757.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-91]
gi|420801561|ref|ZP_15271310.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-92]
gi|420806908|ref|ZP_15276153.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-93]
gi|420817777|ref|ZP_15285946.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-95]
gi|420823093|ref|ZP_15290713.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-96]
gi|420828176|ref|ZP_15295282.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-98]
gi|420833864|ref|ZP_15300421.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-99]
gi|420838725|ref|ZP_15304812.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-100]
gi|420843920|ref|ZP_15309529.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-101]
gi|420849585|ref|ZP_15314612.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-102]
gi|420855254|ref|ZP_15319408.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-103]
gi|420860444|ref|ZP_15323983.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-113]
gi|421764775|ref|ZP_16201563.1| protein disaggregation chaperone [Yersinia pestis INS]
gi|51588480|emb|CAH20088.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
system with DnaK, DnaJ, and GrpE [Yersinia
pseudotuberculosis IP 32953]
gi|108774634|gb|ABG17153.1| Clp ATPase [Yersinia pestis Nepal516]
gi|108780670|gb|ABG14728.1| Clp ATPase [Yersinia pestis Antiqua]
gi|145211866|gb|ABP41273.1| Clp ATPase [Yersinia pestis Pestoides F]
gi|149289312|gb|EDM39392.1| Clp ATPase [Yersinia pestis CA88-4125]
gi|152959221|gb|ABS46682.1| chaperone ClpB [Yersinia pseudotuberculosis IP 31758]
gi|162352455|gb|ABX86403.1| chaperone ClpB [Yersinia pestis Angola]
gi|165921516|gb|EDR38713.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. F1991016]
gi|165990884|gb|EDR43185.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205898|gb|EDR50378.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960584|gb|EDR56605.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167051867|gb|EDR63275.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057699|gb|EDR67445.1| chaperone ClpB [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169752098|gb|ACA69616.1| ATP-dependent chaperone ClpB [Yersinia pseudotuberculosis YPIII]
gi|186697242|gb|ACC87871.1| ATP-dependent chaperone ClpB [Yersinia pseudotuberculosis PB1/+]
gi|229681927|gb|EEO78020.1| Clp ATPase [Yersinia pestis Nepal516]
gi|229687860|gb|EEO79933.1| Clp ATPase [Yersinia pestis biovar Orientalis str. India 195]
gi|229695257|gb|EEO85304.1| Clp ATPase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700337|gb|EEO88369.1| Clp ATPase [Yersinia pestis Pestoides A]
gi|262366978|gb|ACY63535.1| Clp ATPase [Yersinia pestis D182038]
gi|270337891|gb|EFA48668.1| ATP-dependent chaperone protein ClpB [Yersinia pestis KIM D27]
gi|294355448|gb|ADE65789.1| Clp ATPase [Yersinia pestis Z176003]
gi|320016467|gb|ADW00039.1| Clp ATPase [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|342854014|gb|AEL72567.1| protein disaggregation chaperone [Yersinia pestis A1122]
gi|391423090|gb|EIQ85605.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-01]
gi|391423345|gb|EIQ85839.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-02]
gi|391423480|gb|EIQ85958.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-03]
gi|391438151|gb|EIQ98939.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-04]
gi|391439203|gb|EIQ99882.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-05]
gi|391443012|gb|EIR03370.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-06]
gi|391454927|gb|EIR14087.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-07]
gi|391455840|gb|EIR14924.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-08]
gi|391457773|gb|EIR16690.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-09]
gi|391470814|gb|EIR28445.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-10]
gi|391473165|gb|EIR30566.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-12]
gi|391486889|gb|EIR42879.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-13]
gi|391488482|gb|EIR44325.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-15]
gi|391488509|gb|EIR44344.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-14]
gi|391502865|gb|EIR57119.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-16]
gi|391503067|gb|EIR57296.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-19]
gi|391508126|gb|EIR61897.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-25]
gi|391518865|gb|EIR71549.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-29]
gi|391520255|gb|EIR72819.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-34]
gi|391521247|gb|EIR73729.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-32]
gi|391533240|gb|EIR84536.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-36]
gi|391536320|gb|EIR87315.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-42]
gi|391538825|gb|EIR89599.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-45]
gi|391551799|gb|EIS01281.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-46]
gi|391551880|gb|EIS01352.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-47]
gi|391552363|gb|EIS01793.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-48]
gi|391566625|gb|EIS14594.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-52]
gi|391567817|gb|EIS15635.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-53]
gi|391572166|gb|EIS19427.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-54]
gi|391581134|gb|EIS27050.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-55]
gi|391583185|gb|EIS28870.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-56]
gi|391593775|gb|EIS38035.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-58]
gi|391596756|gb|EIS40654.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-60]
gi|391597876|gb|EIS41656.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-59]
gi|391611119|gb|EIS53327.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-61]
gi|391611657|gb|EIS53811.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-63]
gi|391624356|gb|EIS65004.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-65]
gi|391628755|gb|EIS68776.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-66]
gi|391635025|gb|EIS74231.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-71]
gi|391637031|gb|EIS75996.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-72]
gi|391647158|gb|EIS84820.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-76]
gi|391650621|gb|EIS87885.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-88]
gi|391655003|gb|EIS91787.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-89]
gi|391659979|gb|EIS96191.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-90]
gi|391667560|gb|EIT02880.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-91]
gi|391677021|gb|EIT11368.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-93]
gi|391677724|gb|EIT12005.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-92]
gi|391691050|gb|EIT24012.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-95]
gi|391694003|gb|EIT26705.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-96]
gi|391695490|gb|EIT28056.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-98]
gi|391707961|gb|EIT39259.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-99]
gi|391711122|gb|EIT42111.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-100]
gi|391712084|gb|EIT42995.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-101]
gi|391723962|gb|EIT53588.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-102]
gi|391724696|gb|EIT54249.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-103]
gi|391727374|gb|EIT56603.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-113]
gi|411174326|gb|EKS44359.1| protein disaggregation chaperone [Yersinia pestis INS]
Length = 857
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/707 (58%), Positives = 554/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG + +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGTIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V E+AE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLESERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L R ++ SIANIQL L +L + ++KI++ AL+ + GF
Sbjct: 749 FRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 809 DPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVTLD 847
>gi|56480150|ref|NP_708444.2| protein disaggregation chaperone [Shigella flexneri 2a str. 301]
gi|380865371|sp|Q7UBW5.2|CLPB_SHIFL RecName: Full=Chaperone protein ClpB
gi|56383701|gb|AAN44151.2| heat shock protein [Shigella flexneri 2a str. 301]
Length = 857
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/661 (60%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +++TI+ILRG+++++E+ H V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVQDTIAILRGVKERFELLHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|226953127|ref|ZP_03823591.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ATCC 27244]
gi|226836125|gb|EEH68508.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ATCC 27244]
Length = 859
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/667 (59%), Positives = 540/667 (80%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D+ SK + ++++I + + +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDQDDGSKAEVNHLEQQIAEKQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++ + E+++ R+ + KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKAEKTLVEGDKKAQVELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q +I N K L++TKV EIAE+VS TGIPV+K++Q EREKLL++E+ L
Sbjct: 512 ---QAEIAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQGEREKLLHMESFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ E + ++ VM+ V +
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGETATDDEVRAVVMSAVSQH 746
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID++++F L + I IA+IQL+ L+++L + +M L + A + + GF
Sbjct: 747 FRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLAERDMRLTVDDTAFDLLIDAGF 806
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 807 DPVYGAR 813
>gi|402758389|ref|ZP_10860645.1| clpB [Acinetobacter sp. NCTC 7422]
Length = 859
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/668 (60%), Positives = 538/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++++I + + +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVNHLEQQIAEKQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++ + E+++ R+ + KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKAEKTLVEGDKKAQVELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLLN+E L
Sbjct: 512 ---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQGEREKLLNMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G D E ++ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRTVVMNAVTQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+ +L +M L + A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRARLSDRDMGLTVDDTAFDILIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|294650714|ref|ZP_06728066.1| ATP-dependent chaperone protein ClpB [Acinetobacter haemolyticus
ATCC 19194]
gi|292823398|gb|EFF82249.1| ATP-dependent chaperone protein ClpB [Acinetobacter haemolyticus
ATCC 19194]
Length = 859
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/667 (59%), Positives = 540/667 (80%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D+ SK + ++++I + + +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDQDDGSKAEVNHLEQQIAEKQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++ + E+++ R+ + KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKAEKTLVEGDKKAQVELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q +I N K L++TKV EIAE+VS TGIPV+K++Q EREKLL++E+ L
Sbjct: 512 ---QAEIAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQGEREKLLHMESFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ E + ++ VM+ V +
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGETATDDEVRAVVMSAVSQH 746
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID++++F L + I IA+IQL+ L+++L + +M L + A + + GF
Sbjct: 747 FRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLAERDMRLTVDDTAFDLLIDAGF 806
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 807 DPVYGAR 813
>gi|218930300|ref|YP_002348175.1| protein disaggregation chaperone [Yersinia pestis CO92]
gi|54035780|sp|Q74X11.2|CLPB_YERPE RecName: Full=Chaperone protein ClpB
gi|115348911|emb|CAL21868.1| Clp ATPase [Yersinia pestis CO92]
Length = 857
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/707 (58%), Positives = 554/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG + +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGTIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V E+AE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLKSERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L R ++ SIANIQL L +L + ++KI++ AL+ + GF
Sbjct: 749 FRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 809 DPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVTLD 847
>gi|425744089|ref|ZP_18862150.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-323]
gi|425491890|gb|EKU58167.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-323]
Length = 859
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/668 (60%), Positives = 539/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++++I + + +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVNHLEQQIAEKQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++ + E+++ R + KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKAEKTLVEGDKKAQVELDQARSALEKAKREGDLAEAARLQYGVIPELQKRLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLLN+E L
Sbjct: 512 ---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQGEREKLLNMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E ++ VM+ V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRAVVMSAVTQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I IA+IQL+ L+ +L + +M L + A + + G
Sbjct: 746 HFRPEFINRIDELVIFHSLQKAQIRGIADIQLDRLRTRLSERDMGLTVDDTAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|317049247|ref|YP_004116895.1| ATP-dependent chaperone ClpB [Pantoea sp. At-9b]
gi|316950864|gb|ADU70339.1| ATP-dependent chaperone ClpB [Pantoea sp. At-9b]
Length = 857
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 535/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL +++ E+++ E +
Sbjct: 395 DEAASSIRLQIDSKPEPLDRLDRRIIQLKLEQQALKKESDDASVKRLEMLETELDQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG++ LE+ L
Sbjct: 455 YAELEEEWKAEKASLTGTQNIKAELEQARLSLEQARRVGDLGQMSELQYGKIPALEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHA 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYPEMKDLVMSVVGHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + L IS A++ + G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYQLHISDEAIRLLGENGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|123441247|ref|YP_001005234.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420257395|ref|ZP_14760155.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088208|emb|CAL10996.1| Clp ATPase [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|404515185|gb|EKA28960.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 857
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/708 (58%), Positives = 553/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKAALTGTQNIKTELEQAKISLEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V EIAE+++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDKLLRMEQDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSE-MKEMVMEVVTH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVTLD 847
>gi|268593139|ref|ZP_06127360.1| ATP-dependent chaperone protein ClpB [Providencia rettgeri DSM
1131]
gi|291311412|gb|EFE51865.1| ATP-dependent chaperone protein ClpB [Providencia rettgeri DSM
1131]
Length = 857
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/708 (58%), Positives = 556/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGE+P L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEIPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++++E+ + E +
Sbjct: 395 DEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLEEELTEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E R+++ KA R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSALEEEWKAEKASLTGTQHIKAELENTRIEMEKARRMGDLAKMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + LL+ KV EIAEI++R TGIPVS++++ EREKLL +E L +
Sbjct: 515 AATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREKLLRMEQQLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIGYSE-MKDMVMEVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L ++ I +IANIQL L +L + ++ + AAL+KI G
Sbjct: 748 SFRPEFINRIDEVVVFHPLGKEQITNIANIQLARLYKRLEEHGYEVSATPAALEKIGEAG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD I+GAR + K+++ + ++P A I G L+ P LD
Sbjct: 808 FDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLLPGKPVVLD 847
>gi|406037410|ref|ZP_11044774.1| clpB [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 859
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/668 (60%), Positives = 539/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLSKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+ A+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIGAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++++I + + +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVNHLEQQIAEKQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IWK EKTL++ ++ + E+++ R+ + KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKAEKTLVEGDKKAQIELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLL +E L K
Sbjct: 512 ---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVTKMLQGEREKLLQMEEFLHK 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E I+ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-IRAVVMNAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L + I +IA+IQL L+++L + ++ L + A + G
Sbjct: 746 HFRPEFINRIDEVVIFHPLQKDQIRAIADIQLERLRSRLNERDIGLTVDDTAFDLLIEAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|397171671|ref|ZP_10495070.1| ATP-dependent protease [Alishewanella aestuarii B11]
gi|396086679|gb|EJI84290.1| ATP-dependent protease [Alishewanella aestuarii B11]
Length = 859
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/662 (61%), Positives = 539/662 (81%), Gaps = 9/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLT +A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LSKYTIDLTARAESGKLDPVIGRDEEIRRCVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L K++L LD+ LLAG KYRGEFE+RLK +L E++ + II+FIDE+
Sbjct: 221 QRIVNKEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERLKAVLNEVAKEEGQIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E A+ +E D++SKKR I+++I++LE +Y L++
Sbjct: 401 IRMQMDSKPEELDRLERRIIQLKLEDNALAKETDDASKKRRDSIREQIDELEQRYNELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W+ EK ++ +Q IK ++E+ RL + A R SD Q +S+L+YG + +LE+ L SQ +
Sbjct: 461 VWESEKAALQGTQYIKADLEQARLDLEVARRASDLQRMSELQYGRIPELEKKLDLASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV +EIA++VS+ TGIPVSK+++ ER+KLL +E L +VVGQ
Sbjct: 521 MQ------EMTLLRHKVTDQEIADVVSKATGIPVSKMLEGERDKLLRMEEALHDKVVGQH 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTEL K L+ +F++ ++++RIDM
Sbjct: 575 EAVSAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELTKALAQFLFDSPDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKIYFRPEF 611
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E E E +K +M+ + FRPEF
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQEHYREYSYAE-MKTMLMDVLSRQFRPEF 753
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NR+D+ +VF L+ + I IA+IQL L+ +L + + L++S AAL+K++ +GFD +YG
Sbjct: 754 LNRLDESVVFHPLDDRQIKQIASIQLQRLRQRLQQRDFQLEVSDAALEKLAEVGFDTLYG 813
Query: 672 AR 673
AR
Sbjct: 814 AR 815
>gi|422009842|ref|ZP_16356824.1| protein disaggregation chaperone [Providencia rettgeri Dmel1]
gi|414092015|gb|EKT53694.1| protein disaggregation chaperone [Providencia rettgeri Dmel1]
Length = 857
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/708 (58%), Positives = 556/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGE+P L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEIPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++++E+ + E +
Sbjct: 395 DEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLEEELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E R+++ KA R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSALEEEWKAEKASLTGTQHIKAELENTRIEMEKARRMGDLAKMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + LL+ KV EIAEI++R TGIPVS++++ EREKLL +E L +
Sbjct: 515 AATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREKLLRMEQQLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIGYSE-MKDMVMEVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L ++ I +IANIQL L +L + ++ + AAL+KI G
Sbjct: 748 SFRPEFINRIDEVVVFHPLGKEQITNIANIQLARLYKRLEEHGYEVSATPAALEKIGEAG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD I+GAR + K+++ + ++P A I G L+ P LD
Sbjct: 808 FDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLLPGKPVILD 847
>gi|238765381|ref|ZP_04626305.1| Chaperone protein clpB 1 [Yersinia kristensenii ATCC 33638]
gi|238696423|gb|EEP89216.1| Chaperone protein clpB 1 [Yersinia kristensenii ATCC 33638]
Length = 857
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/708 (58%), Positives = 553/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKAALTGTQNIKTELEQAKITLEQARRVGDLAQMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V EIAE+++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDKLLRMEEDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAMFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTE-MKEMVMEVVTH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIASIQLARLYKRLEERGYQVTITQPALEFLGETG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVTLD 847
>gi|332160283|ref|YP_004296860.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664513|gb|ADZ41157.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 857
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/708 (58%), Positives = 553/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKAALTGTQNIKTELEQAKISLEQARRVGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V EIAE+++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDKLLRMEQDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSE-MKEMVMEVVTR 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVTLD 847
>gi|386309637|ref|YP_006005693.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|418243771|ref|ZP_12870225.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433551271|ref|ZP_20507314.1| ClpB protein [Yersinia enterocolitica IP 10393]
gi|318604489|emb|CBY25987.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|330863598|emb|CBX73708.1| chaperone protein clpB [Yersinia enterocolitica W22703]
gi|351776724|gb|EHB19022.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431788370|emb|CCO70354.1| ClpB protein [Yersinia enterocolitica IP 10393]
Length = 857
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/708 (58%), Positives = 553/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKAALTGTQNIKTELEQAKISLEQARRVGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V EIAE+++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDKLLRMEQDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSE-MKEMVMEVVTH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVTLD 847
>gi|415765950|ref|ZP_11482887.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|348653689|gb|EGY69376.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-3]
Length = 680
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/644 (60%), Positives = 524/644 (81%), Gaps = 6/644 (0%)
Query: 30 LDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKK 89
+DPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K+
Sbjct: 1 MDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKR 60
Query: 90 ILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAG 149
+L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDE+HTM+G GK +G++DAG
Sbjct: 61 VLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAG 120
Query: 150 NMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKK 209
N+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++
Sbjct: 121 NLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKER 180
Query: 210 YEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLE 269
YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+
Sbjct: 181 YEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLD 240
Query: 270 RRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIK 329
RR+IQLK+E +A+++E D++S+KRL +++KE+ + E +YA LE++WK EK + +Q IK
Sbjct: 241 RRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIK 300
Query: 330 EEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTK 389
E+E R ++ +A R D +S+L+YG++ LE+ L + + + +LL+ +
Sbjct: 301 AELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAE------GKEMSLLRYR 354
Query: 390 VGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSG 449
V EEIAE++SR TGIPV+K+++ E+EKLL +E L KRV+GQ+EA+ AV+NAIRRSR+G
Sbjct: 355 VTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEFLHKRVIGQNEAVDAVANAIRRSRAG 414
Query: 450 LSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAP 509
LSD RP GSF+FLGPTGVGKTELCK L++ +F++E++++RIDMSEF+EKHS+SRL+GAP
Sbjct: 415 LSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAP 474
Query: 510 PGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFR 569
PGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FR
Sbjct: 475 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFR 534
Query: 570 NTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNI 629
NT+++MTSNLGSD I+E + + +K VM V YFRPEFINRID+ ++F LN++NI
Sbjct: 535 NTVVIMTSNLGSDLIQEHAQEGYDTVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENI 594
Query: 630 LSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
IA+IQL L ++ L + A L IS+IG+D I+GAR
Sbjct: 595 RQIADIQLRRLTRRMETHGYVLNFTDATLDFISDIGYDPIFGAR 638
>gi|188534765|ref|YP_001908562.1| protein disaggregation chaperone [Erwinia tasmaniensis Et1/99]
gi|188029807|emb|CAO97688.1| Chaperone ClpB [Erwinia tasmaniensis Et1/99]
Length = 859
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/670 (60%), Positives = 539/670 (80%), Gaps = 13/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIKRLEMLEGELNQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ +L + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQQEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKEIIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+ +K VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGE---MKELVMSVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEFINRID+++VF L ++I SIA IQL L +L + L IS AAL++++
Sbjct: 746 SHSFRPEFINRIDELVVFHPLGEQHIASIARIQLQRLYQRLEERGYTLHISDAALQQLAE 805
Query: 664 IGFDLIYGAR 673
G+D +YGAR
Sbjct: 806 NGYDPVYGAR 815
>gi|317493980|ref|ZP_07952397.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918307|gb|EFV39649.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 857
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 539/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAANLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLNEELEHKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG+L LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQNIKAEIEQAKISLEQARRVGDLAKMSEIQYGKLPDLEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER KLL +E+ L +
Sbjct: 515 AATQSE------GKTMKLLRNKVTDVEIAEVLARWTGIPVSRMLESERAKLLRMEDDLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + D +K VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGQLDYGEMKELVMSVVSHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L++KNI +IA IQL L +L + + I+ AAL+++S GF
Sbjct: 749 FRPEFINRIDETVVFHPLDQKNIKAIARIQLERLYQRLEEKGYSVTITDAALEQLSKAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|365834579|ref|ZP_09376024.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
gi|364568968|gb|EHM46597.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
Length = 857
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/667 (60%), Positives = 539/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAANLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLNEELEHKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG+L LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQNIKAEIEQAKISLEQARRVGDLAKMSEIQYGKLPGLEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ ER KLL +E+ L +
Sbjct: 515 AATQSE------GKTMKLLRNKVTDVEIAEVLARWTGIPVSRMLESERAKLLRMEDDLHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + D +K VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGQLDYGEMKELVMSVVSHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L++KNI +IA IQL L +L + + I+ AAL+++S GF
Sbjct: 749 FRPEFINRIDETVVFHPLDQKNIKAIARIQLERLYQRLEEKGYSVTITDAALEQLSKAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|421727045|ref|ZP_16166211.1| protein disaggregation chaperone [Klebsiella oxytoca M5al]
gi|410372260|gb|EKP26975.1| protein disaggregation chaperone [Klebsiella oxytoca M5al]
Length = 857
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/699 (58%), Positives = 546/699 (78%), Gaps = 15/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEVRLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIV A+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVEAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ +E+ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIKRLDMLNEELADKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ +
Sbjct: 455 YSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQMA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYSHMKDLVLGVVSQS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHLSDEALKLLSENGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I G+LI
Sbjct: 809 DPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|254785223|ref|YP_003072651.1| ATP-dependent chaperone ClpB [Teredinibacter turnerae T7901]
gi|237683583|gb|ACR10847.1| ATP-dependent chaperone ClpB [Teredinibacter turnerae T7901]
Length = 879
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/682 (59%), Positives = 539/682 (79%), Gaps = 28/682 (4%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLT +A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTARAEAGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI++GEVP L ++++L LD+ LLAG K+RGEFE+RLK +L E+ + +++FIDEL
Sbjct: 221 QRIVDGEVPEGLKNRRLLSLDLGALLAGAKFRGEFEERLKSVLNELGKQEGRVVLFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK++V+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVVVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P+ E+TI+ILRGL+++YE+HHGV I+D AI+AA++LS RYI+DR +PDKAIDLIDEA ++
Sbjct: 341 PNEEDTIAILRGLKERYELHHGVNISDSAIIAAAKLSQRYITDRQLPDKAIDLIDEAGSR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+LERRLIQLKIE EA+K++ D +++KRL LI+ +I++ E YA+L++
Sbjct: 401 IRMEIDSKPEQMDRLERRLIQLKIEREAVKKDDDTAARKRLDLIESQIDEAERAYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ SQQIK +E+ RL + A R D +S+L+YG + +LE+ L SQ +
Sbjct: 461 IWRAEKVSLQGSQQIKSNLEQARLDLEAARRAGDLGRMSELQYGIIPELEKQLDMASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ ++ LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E +L +RV+GQ
Sbjct: 521 M------HEMKLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEEVLHERVIGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVIAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDSQDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL+LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLVLLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--------------------- 592
+DGRLTD +GRT++FRNT++VMTSNLGS I+++ +
Sbjct: 695 EDGRLTDGQGRTVDFRNTVVVMTSNLGSAAIQDIAQNRAYDSINFDESSSQDDSMQNEHK 754
Query: 593 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 651
+K AVM V +FRPEFINRID+++VF L + I IA+IQL IL+ +L + + L
Sbjct: 755 YAAMKDAVMEVVAGHFRPEFINRIDEVVVFHPLGKPQIRGIADIQLGILRKRLHERELKL 814
Query: 652 KISKAALKKISNIGFDLIYGAR 673
+S + KI+ GFD +YGAR
Sbjct: 815 DMSNEVMDKIAEAGFDPVYGAR 836
>gi|37525237|ref|NP_928581.1| protein disaggregation chaperone [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|54035796|sp|Q7N788.1|CLPB_PHOLL RecName: Full=Chaperone protein ClpB
gi|36784664|emb|CAE13564.1| heat shock protein F84.1 [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 857
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/708 (57%), Positives = 556/708 (78%), Gaps = 15/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ +E+ E +
Sbjct: 395 DEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKRLEMLNEELLVKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E R+ + +A R D +S+++YG++ LE+ L
Sbjct: 455 YSELEEEWKAEKAALTGTQHIKAELENARISLEQARRSGDLAKMSEIQYGKIPGLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + + LL+ KV EIA+I++R TGIPV+++++ E++KLL +E L K
Sbjct: 515 AATQAE------SKHMKLLRNKVTDAEIADILARWTGIPVARMLESEKDKLLRMEQELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA++A+SNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVNAISNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDMIQERFGSLNYDEMKDIVMGIVSHN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L R+++ +IA+IQL L +L + + I++ AL+ ++ GF
Sbjct: 749 FRPEFINRIDEAVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVTITQQALEILAEAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
D +YGAR + K+++ + ++P A I G L+ P +LD
Sbjct: 809 DPVYGARPL---KRAIQQEI-----ENPLAQKILSGQLLPGKPVTLDV 848
>gi|259909394|ref|YP_002649750.1| protein disaggregation chaperone [Erwinia pyrifoliae Ep1/96]
gi|387872373|ref|YP_005803754.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
pyrifoliae DSM 12163]
gi|224965016|emb|CAX56546.1| Chaperone protein [Erwinia pyrifoliae Ep1/96]
gi|283479467|emb|CAY75383.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
pyrifoliae DSM 12163]
Length = 857
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/670 (60%), Positives = 537/670 (80%), Gaps = 13/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+S KRL +++ E+++ E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDEASIKRLKMLEGELSQKESE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK ++E+ +L + +A R+ D +S+L+YG++ LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQHIKAQLEQAKLNMEQARRQGDLGQMSELQYGKIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQQLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQHEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKEIIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+ +K VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGE---MKELVMSVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEFINRID+++VF L K+I SIA IQL L +L + L +S AAL+++
Sbjct: 746 SHSFRPEFINRIDELVVFHPLGEKHIASIARIQLQRLYQRLEERGFTLHVSDAALQQLGE 805
Query: 664 IGFDLIYGAR 673
G+D +YGAR
Sbjct: 806 NGYDPVYGAR 815
>gi|406039852|ref|ZP_11047207.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter ursingii DSM
16037 = CIP 107286]
Length = 859
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/668 (59%), Positives = 537/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L LD+ LLAG KYRGEFE+RLK +L +++ ++I
Sbjct: 212 IVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAKQDGNVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYAAHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +D+LERR+IQLK++ EA+KR+ D SK + ++++I+ +E +
Sbjct: 392 DEAASRIKMEIDSKPEALDRLERRIIQLKMQLEAVKRDEDAGSKAEINHLEEQISIIEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y ++E+IWK EKTL++ ++ + E+++ R+ +KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDMEEIWKAEKTLVEGDKKAQIELDQARIAFDKAQREGDLAEAARLQYGVIPELQKRLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 ---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQGEREKLLHMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G D E ++ VM+ V
Sbjct: 687 ILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRAVVMSAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L + I IA+IQL+ L+++L + L + A + + G
Sbjct: 746 HFRPEFINRIDELVVFHSLKKSQIRGIADIQLDRLRSRLADREIGLTVDDTAFDLLIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|90417179|ref|ZP_01225106.1| ClpB protein [gamma proteobacterium HTCC2207]
gi|90330955|gb|EAS46216.1| ClpB protein [marine gamma proteobacterium HTCC2207]
Length = 855
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/662 (61%), Positives = 545/662 (82%), Gaps = 9/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LDKYTIDLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ LLAG K+RG+FE+RLK +LK++S + II+FIDE+
Sbjct: 220 QRIINGEVPEGLKNKRVLTLDLGALLAGAKFRGDFEERLKAVLKDLSKQEGQIILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR++IEKDAA ERRFQK+LVEE
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKFIEKDAALERRFQKVLVEE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+T++ILRGL+++YEVHHGVEITD AIVAA++LS RYI+DR +PDKAIDLIDE+ ++
Sbjct: 340 PSEEDTVAILRGLKERYEVHHGVEITDSAIVAAAKLSQRYITDRQLPDKAIDLIDESGSR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+LERRLIQLKIE EA+K++ DE+S+KR ++ +I +L +YA+LE+
Sbjct: 400 IRMEIDSKPEEMDRLERRLIQLKIEREAVKKDKDEASRKRQQKLEDDIAELGGEYADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ S IK E+E+ ++ + A R + + +++++Y + +LE+ L + +
Sbjct: 460 IWKAEKASMQGSTHIKAELEQAKVNLEAAHRSGNLEKMAQIQYSIIPELEKQLA-SANSE 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q+ LL+ +V EE+AE+V++ TGIPVSK+++ ER+KLL +E+ L +RV+GQ
Sbjct: 519 VQIEKR-----LLRNRVTEEEVAEVVAKWTGIPVSKMLEGERDKLLRMEDSLHRRVMGQS 573
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F++EE+++RIDM
Sbjct: 574 EAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSLAEFLFDSEEAMVRIDM 633
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDEIEKA+ DVFNILLQ+L
Sbjct: 634 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEIEKAHPDVFNILLQVL 693
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKIYFRPEF 611
DDGRLTD +GRT++F+NT+IVMTSNLGSD I +M G++ +++K AVM+ V +FRPEF
Sbjct: 694 DDGRLTDGQGRTVDFKNTVIVMTSNLGSDVI-QMLAGEENYDVMKSAVMDVVSGHFRPEF 752
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INR+D+++VF L + + IA+IQL++L+ +L + + L +S+ L K+ GFD +YG
Sbjct: 753 INRVDEVVVFHPLTKDQLRGIASIQLDLLRKRLAEHELQLSLSEEVLDKLLEAGFDPVYG 812
Query: 672 AR 673
AR
Sbjct: 813 AR 814
>gi|71281252|ref|YP_270571.1| ATP-dependent chaperone protein ClpB [Colwellia psychrerythraea
34H]
gi|71146992|gb|AAZ27465.1| ATP-dependent chaperone protein ClpB [Colwellia psychrerythraea
34H]
Length = 861
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/662 (60%), Positives = 538/662 (81%), Gaps = 9/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIG+PGVGKTAIVEGLA
Sbjct: 161 LNKYTVDLTELAEHGKLDPVIGRDDEIRRTLQVLQRRTKNNPVLIGQPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I+FIDEL
Sbjct: 221 QRIVNNEVPEGLKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLNELSKEEGQVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVNITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERRLIQLK+E A++++ DE++ KRL +I ++I++ + KY L++
Sbjct: 401 IRLQMDSKPEDLDRLERRLIQLKLEQRALEKDEDEATIKRLAIISQQISEKQKKYDELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + + IKEE+E+ R+++ A R D +S+L+YG+L +LE+ L SQ +
Sbjct: 461 VWTTEKAALYGAHTIKEELEQARIELEAARRTGDLNRMSELQYGKLPELEKQLDLASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL KV EIA+++SR TGIPV+K+++ ER+KLL++E+ L + V+GQ
Sbjct: 521 MQ------EMTLLANKVTEVEIADVLSRATGIPVAKMLEQERDKLLHMEDNLHQNVIGQH 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+++VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTEL K L+ +F++++++IR+DM
Sbjct: 575 EAVTSVSNAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTELTKALAEFLFDSQDALIRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKIYFRPEF 611
DDGRLTD +GRT++F+NT+I+MTSN+GSD I+E+ G+ + +K VMN + +F+PEF
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIIMTSNIGSDIIQEL-AGESQYHQMKEEVMNTLGQHFKPEF 753
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INR+D+ +VF L + I IA IQ+ L ++L++ ++L I++ AL IS GFD I+G
Sbjct: 754 INRVDESVVFHPLVAEQIKKIAKIQIEALADRLIEQELNLTINEEALSLISAAGFDPIFG 813
Query: 672 AR 673
AR
Sbjct: 814 AR 815
>gi|420747927|ref|ZP_15224009.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-64]
gi|391614450|gb|EIS56315.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-64]
Length = 857
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/707 (58%), Positives = 553/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+IT PAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITAPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG + +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGTIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V E+AE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLESERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L R ++ SIANIQL L +L + ++KI++ AL+ + GF
Sbjct: 749 FRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 809 DPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVTLD 847
>gi|406914738|gb|EKD53889.1| hypothetical protein ACD_60C00143G0031 [uncultured bacterium]
Length = 862
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/664 (62%), Positives = 542/664 (81%), Gaps = 13/664 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLT +A GKLDPVIGRD EIRR IQVL RR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTARAEQGKLDPVIGRDAEIRRTIQVLLRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L K++L LD+ L+AG K+RGEFE+RLK +L +++ + II+FIDEL
Sbjct: 221 QRIVNREVPEGLQDKRLLALDLGALIAGAKFRGEFEERLKAVLNDLAKQEGQIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ+ILV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQRILVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P + +TI+ILRGL+++YE+HHGVEITD A+VAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVPDTIAILRGLKERYELHHGVEITDSALVAAATLSHRYISDRQLPDKAIDLIDEAASN 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE +D L+RR+IQLKIE EA+K+E DE+SKKRL ++KE+ KLE + LE
Sbjct: 401 IRMEIDSKPEELDTLDRRVIQLKIEREALKKETDEASKKRLEKLEKELKKLESESDKLEN 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKS--- 370
IWK EK+ ++ +Q IK ++E+ RL+ A R D +++L+YG + +LE+ L E S
Sbjct: 461 IWKNEKSTLQGAQTIKSDLERARLEFETARRAGDLTRMAELQYGLIPELEKKLTEASLAE 520
Query: 371 QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVV 430
+K+ Q LL++KV EEIAE+VS+ T IPVSK+++ E+EKLL++E+ L KR++
Sbjct: 521 KKETQ---------LLRSKVTEEEIAEVVSKWTHIPVSKMLESEKEKLLHMEDALHKRII 571
Query: 431 GQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIR 490
GQ +A++AV NAIRRSR+GLSD KRP GSF+FLGPTGVGKTELCK L+A +F+ EE++IR
Sbjct: 572 GQSQAVNAVCNAIRRSRAGLSDPKRPIGSFLFLGPTGVGKTELCKALAAFLFDTEEAVIR 631
Query: 491 IDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILL 550
IDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE+VRRKPYS+ILLDE+EKA+ DVFNILL
Sbjct: 632 IDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKPYSVILLDEMEKAHHDVFNILL 691
Query: 551 QILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIKLAVMNEVKIYFRP 609
Q+LDDGRLTD+ GRT++FRNTIIVMTSNLGS+ I+++ K GD +K AV+ V +FRP
Sbjct: 692 QVLDDGRLTDSHGRTVDFRNTIIVMTSNLGSELIQDISKHGDYFEMKEAVLKVVGQHFRP 751
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EF+NRID+ +VF L+R+ I SIA IQ + L+ +L + + L ++ AL +++IG+D +
Sbjct: 752 EFLNRIDETVVFHPLDREQIKSIAEIQFDRLRARLAEKDYSLSMTHEALDYLASIGYDPV 811
Query: 670 YGAR 673
YGAR
Sbjct: 812 YGAR 815
>gi|300722275|ref|YP_003711559.1| ATP-dependent protease [Xenorhabdus nematophila ATCC 19061]
gi|297628776|emb|CBJ89354.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Xenorhabdus nematophila ATCC
19061]
Length = 857
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/667 (61%), Positives = 538/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L +++ + II
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKGVLNDLAKQEGSII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKRLEMLNAELTEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E R+++ +A R D +S+++YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKAELSGTQNIKAELENARIELERARRSGDLAKMSEIQYGKIPELEKRLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + LL+ KV EIAEI++R TGIPVS++++ E++KLL +E L K
Sbjct: 515 TATASE------NHHMKLLRNKVTDSEIAEILARWTGIPVSRMLESEKDKLLRMEQELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRTI+FRNT+++MTSNLGSD I+E D +K VM V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTIDFRNTVVIMTSNLGSDMIQERFGSLDYAGMKDMVMEVVGHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+I+VF L +++++SIANIQL L +L + + ++ +AL K+S GF
Sbjct: 749 FRPEFINRIDEIVVFHPLGKEHLVSIANIQLQRLYQRLEERGYQVVMTPSALDKLSEAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|383188698|ref|YP_005198826.1| ATP-dependent chaperone ClpB [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371586956|gb|AEX50686.1| ATP-dependent chaperone ClpB [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 857
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/707 (57%), Positives = 552/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLSDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+N+ E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASVKRLEMLETELNQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKAELEQAKITLEQARRVGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMLESEREKLLRMEEELHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +FN++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFNSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + +K +VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQQHFGEASYAQMKESVMEVVTHS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +I +IA IQL L +L + ++ AAL+ + N GF
Sbjct: 749 FRPEFINRIDEVVVFHPLGHAHIKNIAKIQLERLYKRLEEHGYTATLTDAALELLGNTGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K+++ + ++P A I G LI P ++D
Sbjct: 809 DPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGKPITVD 847
>gi|307132185|ref|YP_003884201.1| ClpB protein [Dickeya dadantii 3937]
gi|306529714|gb|ADM99644.1| ClpB protein [Dickeya dadantii 3937]
Length = 857
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/708 (57%), Positives = 554/708 (78%), Gaps = 15/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++ E+ + E +
Sbjct: 395 DEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLKRLEILNAELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG++ +LE+ L
Sbjct: 455 YSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIAE+++R TGIPVS++++ EREKLL +E L +
Sbjct: 515 AATQVE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLESEREKLLRMEQELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F+++++
Sbjct: 569 RVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + ++ V++ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEMNYNQMRDMVLSVVSHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
F EFI ID+++VF L + +I SIA IQL L ++ + + IS AAL+ + GF
Sbjct: 749 FCHEFIICIDEVVVFHPLGKSHITSIAQIQLQRLYKRMEERGYTVTISDAALELLGKSGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
D +YGAR + K+++ ++ ++P A I G L+ P +LD
Sbjct: 809 DPVYGARPL---KRAIQQMI-----ENPLAQQILSGALVPGKPVTLDA 848
>gi|238756475|ref|ZP_04617782.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
gi|238705324|gb|EEP97734.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
Length = 857
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/710 (58%), Positives = 554/710 (78%), Gaps = 17/710 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKISLEQARRVGDLGKMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + N LL+ +V EIA++++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AATQAE------GNTMKLLRNRVTETEIADVLARWTGIPVSRMLESERDKLLRMEQDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTE-MKNMVMEIVGH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R + SIA IQL L +L + ++ I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAQLASIAKIQLARLYKRLEERGYEVTITEPALEFLGEAG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTL 715
FD +YGAR + K+++ + ++P A I G L+ P +LD +
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLLPGIPVTLDVV 849
>gi|375109099|ref|ZP_09755353.1| ATP-dependent protease [Alishewanella jeotgali KCTC 22429]
gi|374571285|gb|EHR42414.1| ATP-dependent protease [Alishewanella jeotgali KCTC 22429]
Length = 859
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/662 (61%), Positives = 538/662 (81%), Gaps = 9/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLT +A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LSKYTIDLTARAESGKLDPVIGRDEEIRRCVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L K++L LD+ LLAG KYRGEFE+RLK +L E++ + II+FIDE+
Sbjct: 221 QRIVNKEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERLKAVLNEVAKEEGQIILFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +D+LERR+IQLK+E A+ +E DE+SKKR I+++I++LE +Y L++
Sbjct: 401 IRMQMDSKPEELDRLERRIIQLKLEDNALAKETDEASKKRRDSIREQIDELEQRYNELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W+ EK ++ +Q IK ++E+ RL + A R SD Q +S+L+YG + +LE+ L SQ +
Sbjct: 461 VWESEKAALQGTQYIKADLEQARLDLEVARRASDLQRMSELQYGRIPELEKKLDLASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV +EIA++VS+ TGIPVSK+++ ER+KLL +E L +VVGQ
Sbjct: 521 MQ------EMTLLRHKVTDQEIADVVSKATGIPVSKMLEGERDKLLRMEEALHDKVVGQH 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTEL K L+ +F++ ++++RIDM
Sbjct: 575 EAVSAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELTKALAQFLFDSPDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKIYFRPEF 611
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E E E +K +M+ + FRPEF
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQEHYREYSYAE-MKTMLMDVLSRQFRPEF 753
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NR+D+ +VF L+ + I IA IQL L+ +L + + L++S AAL+K++ +GFD +YG
Sbjct: 754 LNRLDESVVFHPLDDRQIKQIAGIQLQRLRQRLQQRDFLLEVSDAALEKLAEVGFDPLYG 813
Query: 672 AR 673
AR
Sbjct: 814 AR 815
>gi|119505584|ref|ZP_01627655.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2080]
gi|119458527|gb|EAW39631.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2080]
Length = 859
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/692 (59%), Positives = 556/692 (80%), Gaps = 17/692 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT+DLTE A++GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI+EGLA
Sbjct: 161 LEKYTVDLTELAKVGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIIEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QR+INGEVP L +K+IL LD+ LLAG K+RG+FE+RLK +L E+S + II+F+DEL
Sbjct: 221 QRVINGEVPEGLKNKRILSLDLGALLAGAKFRGDFEERLKSVLNELSKEEGRIILFVDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQ++EKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKSEGSMDAGNMLKPALARGELHCVGATTLNEYRQFVEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+TI+ILRGL+++YEVHHGV +TD AI+AA++LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSEEDTIAILRGLKERYEVHHGVAVTDSAIIAAAKLSQRYITDRQLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+LERRLIQLKIE EA+ ++ E+++K++ L+ ++ +L+ + ++L++
Sbjct: 401 IRMEIDSKPESMDRLERRLIQLKIEREAVNKDQTEAAQKQVALLDVQVAELDQELSDLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
I EK ++ + +IK IE+ +L + A R D +S+++YGEL +L++ L Q +
Sbjct: 461 ILTAEKAAVQGAAKIKAAIEQAKLDLEMAQRAGDLTRMSEIQYGELPELDKQLGIAEQVE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q P LL+ +V EE+AE+VSR TGIP+SK+++ +REKLL +E++L +RVVGQD
Sbjct: 521 -QGPTQ-----LLRNRVTEEEVAEVVSRWTGIPISKMLEGDREKLLRMESVLHERVVGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L++ +F+++++++R+DM
Sbjct: 575 EAVIAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALASFVFDSDQAMVRLDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYE GGYLTE VRR+PYSL+LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEAGGYLTEAVRRRPYSLLLLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKIYFRPEF 611
+DGRLTD +GRT++F+NT+IVMTSNLGSD I+EM GD+ + +K AVM V +FRPEF
Sbjct: 695 EDGRLTDGQGRTVDFKNTVIVMTSNLGSDLIQEM-AGDERYDAMKAAVMGVVGRHFRPEF 753
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INR+D+ +VF L + I IANIQ+ L+++L + ++ L++S L ++ GFD ++G
Sbjct: 754 INRVDETVVFHPLAEEQIRGIANIQVESLRHRLAERDLALQLSDEVLDHLAEAGFDPVFG 813
Query: 672 ARDVHGCKKSLSILLKKIHKKSPEANFIFLGD 703
AR + K+++ LL ++P A I GD
Sbjct: 814 ARPL---KRAIQQLL-----ENPLAQQILQGD 837
>gi|322831464|ref|YP_004211491.1| ATP-dependent chaperone ClpB [Rahnella sp. Y9602]
gi|321166665|gb|ADW72364.1| ATP-dependent chaperone ClpB [Rahnella sp. Y9602]
Length = 857
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/707 (57%), Positives = 552/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLSDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL +++ E+++ E +
Sbjct: 395 DEAASSIRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASVKRLEMLETELSQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKAELEQAKITLEQARRVGDLGRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q D LL+ +V EIA++++R TGIPV+++++ EREKLL +E L
Sbjct: 515 AATQAD------GKTMKLLRNRVTDVEIADVLARWTGIPVARMLESEREKLLRMEEELHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +FN++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFNSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + +K +VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQQHFGEASYAQMKASVMEVVTHS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L +I +IA IQL L +L + ++ AAL+ + N GF
Sbjct: 749 FRPEFINRIDEVVVFHPLGHAHIKNIAKIQLARLYKRLEEHGYTATLTDAALELLGNTGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K+++ + ++P A I G LI P ++D
Sbjct: 809 DPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGKPITVD 847
>gi|375335749|ref|ZP_09777093.1| ATP-dependent chaperone protein ClpB [Succinivibrionaceae bacterium
WG-1]
Length = 862
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/662 (61%), Positives = 527/662 (79%), Gaps = 8/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKYTVDLTARAEKGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAICEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ GEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++ + +I+FIDEL
Sbjct: 221 QRIVKGEVPEGLKNKRVLALDMGALIAGAKYRGEFEERLKAVLNALAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYR+YIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGDLHCMGATTLDEYRKYIEKDAALERRFQKVFVGE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGL+++YE+HH V ITDPAIVAA+ LS RYI+DR +PDKAIDLIDEAAA
Sbjct: 341 PSVENTIAILRGLKERYELHHHVTITDPAIVAAATLSNRYITDRQLPDKAIDLIDEAAAS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +DKLER+LIQLK+E EAI +E DE+SKKRL LI +I E +Y NLE+
Sbjct: 401 IRLQMDSKPEALDKLERKLIQLKMEREAIAKENDEASKKRLALIDIDIFDKEKEYKNLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IKEE+EK R + A+R D T+SK++YG + +L+ L+ +
Sbjct: 461 LWKNEKAGLLGTQHIKEELEKARHDFDVASRSGDLATMSKIQYGVIPQLQGQLESAEKNK 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LL+ KV EIAE+VSR TGIPVSK+++ ER KLLN+EN L RV+GQD
Sbjct: 521 VD-----ESKVLLRNKVTENEIAEVVSRATGIPVSKMLEGERAKLLNMENSLHSRVIGQD 575
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ A++N+IRRSR+GLSD RP GSF+F+GPTGVGKTELCK+L+ +F+ ++++RIDM
Sbjct: 576 EAVVAIANSIRRSRAGLSDPNRPIGSFLFMGPTGVGKTELCKSLAEFLFDTTDAMVRIDM 635
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EK S+SRL+GAPPGY+GY+EGGYLTE VRR+PYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 636 SEFMEKFSVSRLVGAPPGYVGYDEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVL 695
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKIYFRPEF 611
DDGRLTD +GRT++F+NT+I+MTSN+GSD I+E E G K IK ++ E+ F+PEF
Sbjct: 696 DDGRLTDGQGRTVDFKNTVIIMTSNIGSDLIQE-ETGKKSYNEIKSDLLQELSTRFKPEF 754
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NRID+ +VF L++++I +IA IQL+ L +L N +++I L +I+ +GFD +YG
Sbjct: 755 LNRIDETVVFHPLSQEHIRNIAKIQLDTLTKRLSANNFNVEIKDHMLSRIAELGFDPVYG 814
Query: 672 AR 673
AR
Sbjct: 815 AR 816
>gi|238760706|ref|ZP_04621827.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
gi|238701079|gb|EEP93675.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
Length = 857
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/708 (58%), Positives = 552/708 (77%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLTRMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V EIAE+++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDKLLRMEQDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSE-MKEMVMEVVTH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVTLD 847
>gi|377555554|ref|ZP_09785282.1| ATPase [endosymbiont of Bathymodiolus sp.]
Length = 852
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/660 (60%), Positives = 533/660 (80%), Gaps = 9/660 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLT++A+ GKLDPVIGRD EIRRAIQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LNKYTLDLTQRAQDGKLDPVIGRDGEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP + K++L LD+A L+AG KYRGEFE+RLK +LKE+ Q +I+FIDEL
Sbjct: 221 QRIINNEVPEGVKGKRLLSLDMAALVAGAKYRGEFEERLKAVLKELEAEQGQVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RG+LHC+GATTLNEYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGDLHCMGATTLNEYREYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P ++TI+ILRGL++KYEVHHGVEITDPAI+AA S RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSEQDTIAILRGLKEKYEVHHGVEITDPAIIAAVTYSQRYITDRQLPDKAIDLIDEAASQ 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MDKLER+LIQLKIE A+K+E D++SK+R ++ I KLE +YA+ E+
Sbjct: 401 IRMEIDSKPESMDKLERKLIQLKIERMALKKEKDKASKERFKELEAHIKKLEKEYADFEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK++++ +Q +KEE+E+ + + A R ++ +S+L+YG++ +LE + E D
Sbjct: 461 IWKREKSVVQGAQHLKEELEQAKSDLELAHRDNNLAKMSELQYGKIPELETKIAEAEAAD 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + TLL+ KV EIA IV+R TGIPV K+++ E++KLL +E+++ KR+VGQD
Sbjct: 521 TQ------EMTLLRNKVTEAEIAHIVARWTGIPVDKMMEGEKDKLLQMESIIHKRLVGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
+A++ +S+A+RRSR+GLSD RP GSFMF+GPTGVGKTEL K L+ +F+ E++I+RIDM
Sbjct: 575 KAVTVISDAVRRSRAGLSDPNRPDGSFMFMGPTGVGKTELTKALADFLFDTEQAIVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYE+GG LTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEQGGVLTEAVRRKPYSIILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I+E D + + V +FRPEF+N
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIVMTSNLGSYLIQENPGKD---MSAELTQIVAEHFRPEFVN 751
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+I+VF L + I SIA +Q+ IL+++L K++++L++ A+ I + G+D ++GAR
Sbjct: 752 RIDEIVVFNNLEKSQIKSIAALQVEILQSRLAKIDLELELDDNAMTLIVDRGYDPVFGAR 811
>gi|389720734|ref|ZP_10187553.1| chaperone ATPase [Acinetobacter sp. HA]
gi|388609418|gb|EIM38590.1| chaperone ATPase [Acinetobacter sp. HA]
Length = 859
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/667 (58%), Positives = 534/667 (80%), Gaps = 6/667 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALQGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPEGLKGKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+ +Y HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKDRYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D +K + ++ +I +E +
Sbjct: 392 DEAASRIKMELDSKPEALDKLERRLIQLKMQLEAVKKDEDSGAKSEVKYLEDQIATVEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+IW+ +K L+ ++ I+ ++++ R+ + KA R+ D ++ +YG + +L++ L+
Sbjct: 452 YSELEEIWRADKALVAGNKDIQVKLDQARIALEKAQREGDLAEAARYQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
I+ + LL+ KV EIAE+VS TGIPV+K++Q ER+KLL++E L K
Sbjct: 512 R-----IEAAEESEAPKLLRDKVTDNEIAEVVSAATGIPVAKMLQGERDKLLHMEEFLHK 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVLLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ G ++ ++ VMN V +
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSSDVRELGGGATRDEVRSVVMNAVSEH 746
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+I+VF L + I IA+IQLN L+ +L + ++ L + +A ++ ++GF
Sbjct: 747 FRPEFINRIDEIVVFHSLEKAQIRGIADIQLNRLRQRLAERDLRLSVEDSAFDQLIDVGF 806
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 807 DPLYGAR 813
>gi|292487321|ref|YP_003530193.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora CFBP1430]
gi|291552740|emb|CBA19785.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora CFBP1430]
gi|312171427|emb|CBX79686.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ATCC BAA-2158]
Length = 857
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/670 (59%), Positives = 536/670 (80%), Gaps = 13/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+ + E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIKRLEMLEGELGQKESE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ +L + +A R+ D +S+L+YG++ LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMSELQYGKIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQQEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKEIIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+ +K VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALNYGE---MKELVMSVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEFINRID+++VF L ++I SIA IQL L +L + L +S AAL+++
Sbjct: 746 SQNFRPEFINRIDELVVFHPLGEEHIASIARIQLQRLYQRLEERGFTLHVSDAALQQLGE 805
Query: 664 IGFDLIYGAR 673
G+D +YGAR
Sbjct: 806 NGYDPVYGAR 815
>gi|238790743|ref|ZP_04634504.1| Chaperone protein clpB 1 [Yersinia frederiksenii ATCC 33641]
gi|238721184|gb|EEQ12863.1| Chaperone protein clpB 1 [Yersinia frederiksenii ATCC 33641]
Length = 857
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/708 (58%), Positives = 554/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL +++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLETELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V EIAE+++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDKLLRMEQDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTE-MKNMVMDVVTH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R ++ SIA IQL L +L + + I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIARIQLERLYKRLEERGYQVTITQPALEFLGETG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ + ++P + I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLSQQILSGKLIPGVPVTLD 847
>gi|428784253|ref|ZP_19001745.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ACW56400]
gi|426277392|gb|EKV55118.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ACW56400]
Length = 836
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/664 (60%), Positives = 534/664 (80%), Gaps = 13/664 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 140 LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 199
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I+FIDEL
Sbjct: 200 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDEL 259
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 260 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 319
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 320 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 379
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+ + E +Y+ LE+
Sbjct: 380 IRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIKRLEMLEGELGQKESEYSELEE 439
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ +L + +A R+ D +S+L+YG++ LE+ L +Q +
Sbjct: 440 EWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMSELQYGKIPDLEKQLAAATQSE 499
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L RV+GQ
Sbjct: 500 ------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHTRVIGQQ 553
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 554 EAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDM 613
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 614 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 673
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKEIIKLAVMNEVKIYFRP 609
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+ +K VM+ V FRP
Sbjct: 674 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALNYGE---MKELVMSVVSQNFRP 730
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EFINRID+++VF L ++I SIA IQL L +L + L +S AAL+++ G+D +
Sbjct: 731 EFINRIDELVVFHPLGEEHIASIARIQLQRLYQRLEERGFTLHVSDAALQQLGENGYDPV 790
Query: 670 YGAR 673
YGAR
Sbjct: 791 YGAR 794
>gi|238752926|ref|ZP_04614388.1| Chaperone protein clpB 1 [Yersinia rohdei ATCC 43380]
gi|238708834|gb|EEQ01090.1| Chaperone protein clpB 1 [Yersinia rohdei ATCC 43380]
Length = 857
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/708 (58%), Positives = 553/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLAKMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + Q LL+ +V E+AE+++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AATALEGQ------TMKLLRNRVTEVEVAEVLARWTGIPVSRMLESERDKLLRMEEDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAMFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYAE-MKDMVMEVVTH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R ++ SIANIQL L +L + + I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYQVTITQPALEFLGEAG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVTLD 847
>gi|385787426|ref|YP_005818535.1| protein disaggregation chaperone [Erwinia sp. Ejp617]
gi|310766698|gb|ADP11648.1| protein disaggregation chaperone [Erwinia sp. Ejp617]
Length = 857
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/670 (59%), Positives = 536/670 (80%), Gaps = 13/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+S KRL +++ E+++ E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDEASIKRLKMLEGELSQKESE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK ++E+ +L + +A R+ D +S+L+YG++ LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQHIKAQLEQAKLNMEQARRQGDLGQMSELQYGKIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQQLHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQHEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKEIIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+ +K VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGE---MKELVMSVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEFINRID+++VF L ++I SIA IQL L +L + L +S AAL+ +
Sbjct: 746 SQNFRPEFINRIDELVVFHPLGERHIASIARIQLQRLYQRLEERGFTLHVSDAALQLLGE 805
Query: 664 IGFDLIYGAR 673
G+D +YGAR
Sbjct: 806 NGYDPVYGAR 815
>gi|238798951|ref|ZP_04642414.1| Chaperone protein clpB 1 [Yersinia mollaretii ATCC 43969]
gi|238717180|gb|EEQ09033.1| Chaperone protein clpB 1 [Yersinia mollaretii ATCC 43969]
Length = 857
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/708 (58%), Positives = 554/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V EIA++++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AATALE------GKTMKLLRNRVTEVEIADVLARWTGIPVSRMLESERDKLLRMEQDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTE-MKNMVMEVVTH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I+++AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQSALEFLGEAG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ + ++P + I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLSQQILSGKLIPGVPVTLD 847
>gi|262376331|ref|ZP_06069561.1| ATP-dependent chaperone ClpB [Acinetobacter lwoffii SH145]
gi|262308932|gb|EEY90065.1| ATP-dependent chaperone ClpB [Acinetobacter lwoffii SH145]
gi|407008463|gb|EKE23828.1| hypothetical protein ACD_6C00314G0001 [uncultured bacterium]
Length = 859
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/670 (58%), Positives = 531/670 (79%), Gaps = 12/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ LLAG KYRGEFE+RLK +LK+I+ ++ +II
Sbjct: 212 IVEGLAQRIINGEVPEGLKGKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDIAKHEGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+ +Y HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKDRYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D +K + + +I +E +
Sbjct: 392 DEAASRIKMELDSKPEALDKLERRLIQLKMQLEAVKKDEDSGAKAEIQYLSDQIATVEKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE++W+ +K L++ ++ ++ ++++ R + KA R+ D ++L+YG + +L
Sbjct: 452 YHDLEEVWRADKALVEGNKDVQIKLDQARTALEKAQREGDLGEAARLQYGVIPEL----- 506
Query: 368 EKSQKDIQLPNNANKFT---LLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 424
QK ++L A++ LL+ KV EIAE+VS TGIPV+K++Q ER+KLL++E
Sbjct: 507 ---QKQLELAEKADESATPKLLRNKVTDNEIAEVVSAATGIPVAKMLQGERDKLLHMEEF 563
Query: 425 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 484
L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F++
Sbjct: 564 LHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDS 623
Query: 485 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 544
+++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA+ D
Sbjct: 624 DDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPD 683
Query: 545 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEV 603
VFNILLQ+LDDGRLTD++GR ++F+N++IVMTSNLGS ++E+ KE ++ VMN V
Sbjct: 684 VFNILLQVLDDGRLTDSQGRVVDFKNSVIVMTSNLGSQDVRELGGNATKEEVRTVVMNAV 743
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+FRPEFINRID+++VF L + I IA+IQL+ L+ +L + +M L + +A ++
Sbjct: 744 SEHFRPEFINRIDELVVFHALEKDQIRGIADIQLDRLRQRLAERDMRLSVDDSAFDQLIE 803
Query: 664 IGFDLIYGAR 673
GFD +YGAR
Sbjct: 804 AGFDPLYGAR 813
>gi|292900313|ref|YP_003539682.1| chaperone ClpB [Erwinia amylovora ATCC 49946]
gi|291200161|emb|CBJ47287.1| chaperone ClpB (heat shock protein) [Erwinia amylovora ATCC 49946]
Length = 857
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/670 (59%), Positives = 536/670 (80%), Gaps = 13/670 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L ++S + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL +++ E+ + E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIKRLEMLEGELGQKESE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ +L + +A R+ D +S+L+YG++ LE+ L
Sbjct: 455 YSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMSELQYGKIPDLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLLRMEQELHT 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA+ AVS+AIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQQEAVEAVSDAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKEIIKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+ +K VM+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALNYGE---MKELVMSVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEFINRID+++VF L ++I SIA IQL L +L + L +S AAL+++
Sbjct: 746 SQNFRPEFINRIDELVVFHPLGEEHIASIARIQLQRLYQRLEERGFTLHVSDAALQQLGE 805
Query: 664 IGFDLIYGAR 673
G+D +YGAR
Sbjct: 806 NGYDPVYGAR 815
>gi|85058562|ref|YP_454264.1| protein disaggregation chaperone [Sodalis glossinidius str.
'morsitans']
gi|84779082|dbj|BAE73859.1| heat shock protein [Sodalis glossinidius str. 'morsitans']
Length = 864
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/667 (59%), Positives = 534/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 162 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 221
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L + ++L LD+ L+AG+KYRGEFE+RLK +L ++S + ++I
Sbjct: 222 IVEGLAQRIVNGEVPEGLKNNRVLSLDMGSLVAGSKYRGEFEERLKGVLSDLSKKEGNVI 281
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR++IEKDAA ERRFQ
Sbjct: 282 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKFIEKDAALERRFQ 341
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP++E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 342 KVFVAEPNVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 401
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL ++ E+ + E
Sbjct: 402 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDDASLKRLAMLNDELAQKERD 461
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q +K E+E+ ++ I +A R D +S+L+YG++ +LE+ L
Sbjct: 462 YSELEEEWKAEKASLSGTQHLKAELEQAKISIEQARRVGDLARMSELQYGKIPELEKQLA 521
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ + LL+ +V EIAE+++R TGIPVS++++ ER KLL +E L +
Sbjct: 522 VASQAE------GKSMRLLRNRVTDIEIAEVLARWTGIPVSRMLESERAKLLRMEQDLHQ 575
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSFMFLGPTGVGKTELCK L +F+++++
Sbjct: 576 RVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFMFLGPTGVGKTELCKALGTFLFDSDDA 635
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++ IDMSEF+EKHS+S+L+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFN
Sbjct: 636 MVCIDMSEFMEKHSVSQLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFN 695
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + + +K V++ V+ +
Sbjct: 696 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDVIQERFGQMNYQEMKDMVLDVVRHH 755
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+++VF L+R++I IA IQL + +L + IS AL + GF
Sbjct: 756 FRPEFINRVDEVVVFHPLSREHITEIAQIQLQRMYQRLEERGYTTTISDEALALLGKSGF 815
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 816 DPVYGAR 822
>gi|146329388|ref|YP_001209038.1| ATP-dependent protease ClpB [Dichelobacter nodosus VCS1703A]
gi|146232858|gb|ABQ13836.1| ATP-dependent protease ClpB [Dichelobacter nodosus VCS1703A]
Length = 857
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/708 (58%), Positives = 563/708 (79%), Gaps = 16/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G LKKYT+D+T++A GK+DPVIGRD+EIRRA+Q+LQRRSKNNPVLIGEPGVGKTA
Sbjct: 156 EDKRGALKKYTLDVTQRALDGKIDPVIGRDEEIRRAMQILQRRSKNNPVLIGEPGVGKTA 215
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI + VP SL K++L LD+A LLAGTKYRGEFE+RLK +L EI+ II
Sbjct: 216 IVEGLAQRIADRAVPESLKGKRLLSLDLAALLAGTKYRGEFEERLKAVLDEITKADGQII 275
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RG+LHCIGATTL+EYRQY+EKDAA ERRFQ
Sbjct: 276 LFIDEIHTMVGAGKSEGSLDAGNMLKPALARGDLHCIGATTLDEYRQYMEKDAALERRFQ 335
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K++V+EP +E+TI+ILRGLQ++YEVHHG+ ITDPA+VAA++LS+RYIS R +PDKAIDL+
Sbjct: 336 KVIVDEPSVEDTIAILRGLQERYEVHHGINITDPALVAAAQLSHRYISGRKLPDKAIDLM 395
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA+I++E+DSKPE+MDK++RRLIQL+IE A+++E D +SK+RL ++ EI E +
Sbjct: 396 DEAAAQIRMELDSKPEVMDKIDRRLIQLQIERMALEKETDAASKRRLSDLEAEIAAQEKE 455
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + + +IKE+++K+R+++ A R+ D+ S+++YG + E+ L
Sbjct: 456 YADLEEIWLAEKAGTQGAAEIKEQLDKLRVELEAAKRRGDFARASEIQYGLIPAKEKQLL 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E Q+ Q P+ L++ KV +EEIAEIVSR TGIPV+K+++ E+E+LL++E +L +
Sbjct: 516 ENEQQTEQRPHR-----LMRNKVTAEEIAEIVSRWTGIPVAKMMEGEKERLLHLETVLNE 570
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ A+ AV+NAIRR+R+GLSD KRP GSF+FLGPTGVGKTELC+TL+ +F++EE+
Sbjct: 571 RVVGQKTAVEAVANAIRRNRAGLSDPKRPIGSFLFLGPTGVGKTELCRTLAQFLFDSEEN 630
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GY++GGYLTE VRRKPYS++L DE+EKA+SDVFN
Sbjct: 631 MVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRKPYSVVLFDEVEKAHSDVFN 690
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
LLQ+LD+GRLTD +GRT++FR+T+I+MTSNLGSD I+ + + E +K AVM V +F
Sbjct: 691 TLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSDMIQLLAEKSYEEMKSAVMEIVMAHF 750
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ IVF L + ++ IA IQL L+ +L + L + + A+ ++ +G+D
Sbjct: 751 RPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLSVEEDAINQLVELGYD 810
Query: 668 LIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTL 715
++GAR + K+++ + H ++P A + G + PQS T+
Sbjct: 811 PLFGARPL---KRAI-----QNHIENPLAQALLAGQYL---PQSTITI 847
>gi|238785830|ref|ZP_04629799.1| Chaperone protein clpB 1 [Yersinia bercovieri ATCC 43970]
gi|238713243|gb|EEQ05286.1| Chaperone protein clpB 1 [Yersinia bercovieri ATCC 43970]
Length = 857
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/708 (57%), Positives = 553/708 (78%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V EIA++++R TGIPV+++++ ER+KLL +E L K
Sbjct: 515 AATALE------GKTMKLLRNRVTEVEIADVLARWTGIPVARMLESERDKLLRMEQDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYAE-MKNMVMEVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGEAG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ + ++P + I G LI P +LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLSQQILSGKLIPGVPVTLD 847
>gi|339477952|ref|YP_004706772.1| ATP-dependent chaperone protein ClpB [Candidatus Moranella endobia
PCIT]
gi|338172503|gb|AEI74904.1| ATP-dependent chaperone protein ClpB [Candidatus Moranella endobia
PCIT]
Length = 857
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/703 (58%), Positives = 546/703 (77%), Gaps = 15/703 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LK +TIDLTE A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LKNFTIDLTEHAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L + ++L LD+ L+AG KYRGEFE RLK +L ++S + +II+FIDEL
Sbjct: 221 QRIVNGEVPEGLKNNRVLSLDMGSLVAGAKYRGEFEARLKSVLHDLSKQEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DA NMLKP L+RGELHC+GATTLNEYR++IEKDAA ERRFQK+ + E
Sbjct: 281 HTMVGAGKADGAMDASNMLKPMLARGELHCVGATTLNEYRKFIEKDAALERRFQKVFIAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PGVEATIAILRGLKERYELHHHVQITDPAIVAAANLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++ E+ K E Y+ LE+
Sbjct: 401 IRIQIDSKPEELDRLERRIIQLKLEQQALKKEMDDASVKRLTMLNNELTKKERDYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q +K E+E+ ++ I +A R D +S+L+YG+L +LE+ L+ SQ +
Sbjct: 461 EWKAEKASLSGTQNLKAELEQTKISIEQARRVGDLARMSELQYGKLPELEKQLEAASQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ LL+ +V EIAE+++R TGIPVS++++ ER KL+ +E L K V+GQ
Sbjct: 521 ------SKGLRLLRNRVTDIEIAEVLARWTGIPVSRMLESERAKLVRMEQHLQKIVIGQH 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVSNAIRRSR+GL+D RP GSFMFLGPTGVGKTELCK L+ +F++E++++RIDM
Sbjct: 575 EAVAAVSNAIRRSRAGLADPNRPIGSFMFLGPTGVGKTELCKALATFLFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE+VRR+PYS++LLDEIEKA+SDVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTELVRRRPYSVMLLDEIEKAHSDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+I+MTSNLGS+ I+E ++ + IK V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVIIMTSNLGSEIIQERFDQINYLEIKDVVLEVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+++VF LNR +I+ IA IQL L +L + IS AL + GFD +YGA
Sbjct: 755 NRVDEVVVFHPLNRNHIIEIAQIQLRRLYQRLEERGYTANISDEALVLLGKSGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTL 715
R + K+++ ++I ++P A I G L+ P L+ L
Sbjct: 815 RPM---KRAIQ---QEI--ENPLAQQILSGQLLPGKPVKLEVL 849
>gi|284007736|emb|CBA73548.1| protein disaggregation chaperone [Arsenophonus nasoniae]
Length = 863
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/668 (61%), Positives = 540/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE LKKYTIDLTE+A KLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 161 EEQRQALKKYTIDLTERAEQSKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 220
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L +++ + ++I
Sbjct: 221 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKAVLNDLAKQEGNVI 280
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 281 LFIDELHTMVGAGKTEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 340
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYISDR +PDKAIDLI
Sbjct: 341 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAASLSNRYISDRMLPDKAIDLI 400
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++++E+ + E +
Sbjct: 401 DEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDEASKKRLKMLEEELTEKERE 460
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E R+ + +A R D +S+L+YG++ +LE+ L+
Sbjct: 461 YSELEEEWKAEKAELTGTQHIKAELENARISLEQARRSGDLAKMSELQYGKIPELEKQLE 520
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + + LL+ KV EIAEI++R TGIPVS++++ EREKLL++E L K
Sbjct: 521 AATKAE------SKTMKLLRNKVTDAEIAEILARWTGIPVSRMLESEREKLLHMEQDLHK 574
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 575 RVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 634
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE +RR+PYS+ILLDEIEKA+ DVFN
Sbjct: 635 MVRIDMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHPDVFN 694
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G E +K VM V
Sbjct: 695 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLGYNE-MKEIVMEVVSR 753
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF LN++ I IA IQL+ L ++ + +KI AAL+K+S G
Sbjct: 754 SFRPEFINRIDEVVVFHPLNKEQITDIAQIQLSRLYKRMEEQGYKVKIKPAALEKLSEAG 813
Query: 666 FDLIYGAR 673
FD ++GAR
Sbjct: 814 FDPVFGAR 821
>gi|304309993|ref|YP_003809591.1| Heat shock protein F84.1 [gamma proteobacterium HdN1]
gi|301795726|emb|CBL43925.1| Heat shock protein F84.1 [gamma proteobacterium HdN1]
Length = 857
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/700 (59%), Positives = 557/700 (79%), Gaps = 10/700 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L+KYTIDLTE+AR GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALQKYTIDLTERARKGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRI+NGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L E++ + +I
Sbjct: 215 IAEGLAQRIVNGEVPEGLKNKRVLSLDMGSLLAGAKFRGEFEERLKSVLTELAKEEGAVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV++P +E+TI+ILRGL+++YEVHHGV+ITD AIV A++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDQPSVEDTIAILRGLKERYEVHHGVDITDSAIVEAAKLSQRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++E+DSKPE +D+L+RRLIQ K+E EA+K+E DE+S+KRL + ++I K E +
Sbjct: 395 DEAASRIRMEMDSKPEELDRLDRRLIQFKMEREALKKEDDEASRKRLEKLNEDIAKNERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK ++ SQQIK E+E+ R+ ++ A R+ D +S+L+YG + +LE+ L
Sbjct: 455 YADLEEIWNAEKAALQGSQQIKVELEQARIDMDGARRRGDLARMSELQYGRIPELEKRLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++ + LL+ +V EE+AE+VS+ TGIPVSK+++ EREKLL +E+ L K
Sbjct: 515 MATQAEM------TEMKLLRNRVTEEEVAEVVSKWTGIPVSKMLEGEREKLLQMEDSLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EAI AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ +++
Sbjct: 569 RVVGQHEAIVAVANAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTELCKALAEFLFDTQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTETVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIKLAVMNEVKIY 606
ILLQ+L+DGRLTD +GRT++F+NT++VMTSNLGSD I+ + + D ++ AVM+ V +
Sbjct: 689 ILLQVLEDGRLTDGQGRTVDFKNTVVVMTSNLGSDMIQTLAREADYNSMRDAVMDVVGQH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L I IA IQL L+ +LL ++ L + + +I +G+
Sbjct: 749 FRPEFINRIDEVVVFHPLADSQIRGIAEIQLANLRKRLLDRDLKLDLDAEVMNRIIEVGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
D ++GAR + K+++ L++ + A GD+I+
Sbjct: 809 DPVFGARPL---KRAIQRLIENPLAQDILAGRFMPGDVIH 845
>gi|8575704|gb|AAF78058.1|AF263561_3 ClpB protease [secondary endosymbiont of Glycaspis brimblecombei]
Length = 857
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/668 (61%), Positives = 541/668 (80%), Gaps = 9/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L +++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKDVLNDLAKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAASLSNRYISDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+ QLK+E +A+K+E D++SKKRL ++++E+ + E +
Sbjct: 395 DEAGASLRMQMDSKPEALDRLERRVTQLKLEQQALKKESDDASKKRLKMLEEELTEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E R+ + +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKAELTGTQHIKAELENARISMEQARRSGDLAKMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ + ++ LL+ KV EIAEI++R TGIPVSK+++ EREKLL++E L K
Sbjct: 515 AATKAE------SHSMKLLRNKVTDAEIAEILARWTGIPVSKMLESEREKLLHMEQDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE +RR+PYS+ILLDEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G E+ +L VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLGYDEMKEL-VMEVVSR 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
FRPEFINRID+++VF L+++ I IA IQL+ L ++ + +KI+ AAL+K+ G
Sbjct: 748 SFRPEFINRIDEVVVFHPLDKEQITEIAQIQLSRLYKRMEEQGYKVKITPAALEKLGEAG 807
Query: 666 FDLIYGAR 673
FD ++GAR
Sbjct: 808 FDPVFGAR 815
>gi|323143510|ref|ZP_08078190.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
12066]
gi|322416704|gb|EFY07358.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
12066]
Length = 864
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/704 (58%), Positives = 548/704 (77%), Gaps = 16/704 (2%)
Query: 12 GYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEG 71
G LKKYTIDLTE+A GKLDPVIGRD+EIRR +Q+LQRR+KNNPVLIGEPGVGKTAIVEG
Sbjct: 159 GALKKYTIDLTERAEKGKLDPVIGRDEEIRRTMQILQRRTKNNPVLIGEPGVGKTAIVEG 218
Query: 72 LAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFID 131
LAQRII GEVP L +KK+L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FID
Sbjct: 219 LAQRIIKGEVPEGLRNKKVLSLDMGALIAGAKYRGEFEERLKGVLNELAKLEGKVILFID 278
Query: 132 ELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILV 191
E+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQK+ V
Sbjct: 279 EIHTMVGAGKSEGSMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVFV 338
Query: 192 EEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAA 251
EP +E TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYI+DR +PDKAIDLIDEAA
Sbjct: 339 GEPSVENTIAILRGLKERYEIHHHVQITDPAIVAAATLSNRYITDRQLPDKAIDLIDEAA 398
Query: 252 AKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANL 311
A I+++IDSKPE +D+L+R++IQLK+E +A+ +E D++SKKRL I +EI++ + +Y+ L
Sbjct: 399 ASIRLQIDSKPEPLDRLDRKIIQLKMERQAVAKETDDASKKRLQAIDEEIDESQKEYSRL 458
Query: 312 EKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQ 371
++IWK EK ++ +QQIK +++ R + + A R+ D +S+L+YG + LE+ +KE
Sbjct: 459 DEIWKKEKLSLEGTQQIKVKLDAARHEFDVAKRQGDLSRMSELQYGIIPSLEKQIKEAGD 518
Query: 372 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
+ F LLK KV EIAE+VS+ TGIPV+K+++ ER KLL++E+ L +RV+G
Sbjct: 519 APAE-----KSFQLLKNKVTDVEIAEVVSKATGIPVAKMLEGERAKLLHMEDNLHQRVIG 573
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
QDEAI+A++N+IRRSR+GLSD RP GSFMF+GPTGVGKTELCK ++ +F+ E++++RI
Sbjct: 574 QDEAINAIANSIRRSRAGLSDPNRPIGSFMFMGPTGVGKTELCKAVAEFLFDTEKAMVRI 633
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSEF+EK S+SRL+GAPPGY+GYE+GGYLTE VRR+PYS+ILLDEIEKA+ DVFNILLQ
Sbjct: 634 DMSEFMEKFSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQ 693
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKIYFRP 609
+LDDGRLTD +GRT++F+NT+I+MTSNLGS+ I+E E G K + IK ++ ++ +F+P
Sbjct: 694 VLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEMIQE-ETGKKSYQEIKAQLLQILEKHFKP 752
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EF+NR+D+ +VF L+ I IA IQL L +L ++ + A + ++NIGFD +
Sbjct: 753 EFLNRVDETVVFHPLSHNEIKKIAKIQLEGLTKRLSAQGYEVILPDALMDHVANIGFDPV 812
Query: 670 YGARDVHGCKKSL-------SILLKKIHKKSP-EANFIFLGDLI 705
+GAR + ++ IL K+ P E NF G+L+
Sbjct: 813 FGARPLRRAIQNTIEDPLANMILSGKVKVGEPFELNFDASGELV 856
>gi|238791396|ref|ZP_04635035.1| Chaperone protein clpB 1 [Yersinia intermedia ATCC 29909]
gi|238729529|gb|EEQ21044.1| Chaperone protein clpB 1 [Yersinia intermedia ATCC 29909]
Length = 857
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/708 (58%), Positives = 551/708 (77%), Gaps = 17/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V EIA++++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AANALE------GKTMKLLRNRVTEVEIADVLARWTGIPVSRMLESERDKLLRMEQDLHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTE-MKNMVMEVVSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETG 807
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
FD +YGAR + K+++ + ++P A I G LI P LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVILD 847
>gi|253990664|ref|YP_003042020.1| chaperone clpb [Photorhabdus asymbiotica]
gi|253782114|emb|CAQ85278.1| chaperone clpb [Photorhabdus asymbiotica]
Length = 857
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/701 (58%), Positives = 553/701 (78%), Gaps = 15/701 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L ++S + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKGVLSDLSKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA A
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLIDEAGAS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ +E+ E +Y+ LE+
Sbjct: 401 LRMQMDSKPEALDRLERRVIQLKLERQALKKESDDASKKRLEMLNEELIVKEREYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E R+ + +A R D +S+++YG++ LE+ L +Q +
Sbjct: 461 EWKAEKAELTGTQHIKAELENARISLEQARRSGDLAKMSEIQYGKIPGLEKQLATATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAEI++R TGIPV+++++ E++KLL +E L KRV+GQ+
Sbjct: 521 ------GKNMKLLRNKVTDTEIAEILARWTGIPVARMLESEKDKLLRMEQELHKRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E G + +K VM V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDMIQERFGGLNYGEMKDMVMGIVSHHFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L R+++ +IA+IQL L +L + + I++ AL+ ++ GFD +YGA
Sbjct: 755 NRIDEVVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVAITQQALEMLAEAGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
R + K+++ + ++P A I G L+ P +LD
Sbjct: 815 RPL---KRAIQQEI-----ENPLAQKILSGQLLPGKPVTLD 847
>gi|190150414|ref|YP_001968939.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|189915545|gb|ACE61797.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
Length = 781
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/614 (62%), Positives = 519/614 (84%), Gaps = 4/614 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 213 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVI 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 273 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 333 KVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ E +
Sbjct: 393 DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTARERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG++ LE+ L
Sbjct: 453 YSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYGKIPALEKQLA 512
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EKLL +E +L
Sbjct: 513 EAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++ ++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHF 748
Query: 608 RPEFINRIDDIIVF 621
RPEFINRID+ +VF
Sbjct: 749 RPEFINRIDETVVF 762
>gi|289674876|ref|ZP_06495766.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal, partial
[Pseudomonas syringae pv. syringae FF5]
Length = 663
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/629 (63%), Positives = 515/629 (81%), Gaps = 7/629 (1%)
Query: 45 QVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKY 104
QVLQRR+KNNPVLIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KY
Sbjct: 1 QVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKY 60
Query: 105 RGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCI 164
RGEFE+RLK +L E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+
Sbjct: 61 RGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCV 120
Query: 165 GATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIV 224
GATTLNEYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+
Sbjct: 121 GATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAII 180
Query: 225 AASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKR 284
AA++LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+
Sbjct: 181 AAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKK 240
Query: 285 EYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATR 344
E DE++ KRL ++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R
Sbjct: 241 EKDEAAIKRLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARR 300
Query: 345 KSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTG 404
+ D +++L+YG + LER L+ Q P N LL++KV EEIAE+VS+ TG
Sbjct: 301 RGDLNRMAELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTG 354
Query: 405 IPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLG 464
IPVSK+++ EREKLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLG
Sbjct: 355 IPVSKMLEGEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLG 414
Query: 465 PTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEI 524
PTGVGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE
Sbjct: 415 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEA 474
Query: 525 VRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKI 584
VRRKPYSLILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I
Sbjct: 475 VRRKPYSLILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQI 534
Query: 585 KEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKL 644
+E+ GD+E + AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L
Sbjct: 535 QEL-VGDREAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRL 593
Query: 645 LKMNMDLKISKAALKKISNIGFDLIYGAR 673
+ + + +S AL K+ +G+D +YGAR
Sbjct: 594 AERELSMTLSPEALDKLIAVGYDPVYGAR 622
>gi|430376469|ref|ZP_19430872.1| ATPase [Moraxella macacae 0408225]
gi|429541700|gb|ELA09728.1| ATPase [Moraxella macacae 0408225]
Length = 860
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/668 (58%), Positives = 538/668 (80%), Gaps = 6/668 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYT+DLTE+A GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDALNKYTVDLTERAESGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQ+I+NG+VP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ ++ I+
Sbjct: 212 IVEGLAQKIVNGDVPEGLRNKRVLALDLGALIAGAKYRGEFEERLKAVLNDLAKSEGQIV 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 272 LFIDEIHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E++I+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDSIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDRKLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E+DSKPE + KL+ RLI LK++ EA+K E D+ + + L+ +I LE +
Sbjct: 392 DEAASRLKMELDSKPEALGKLDSRLIGLKMQREALKNETDDGAIAQRNLLHDQIADLEKQ 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L IW+ EK L+K SQ +K+E++K R+ KA+R++D++T+SKL+Y + LE+ L
Sbjct: 452 YADLNDIWQAEKALVKGSQVLKDELDKARIAYEKASRENDYETMSKLQYETIPDLEKRL- 510
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
++ D+ + ++ LL+ KV EIAE+VS +TGIPV+K++Q EREK+L +E+ L +
Sbjct: 511 --AKSDLAQRSGSDT-KLLRNKVTDNEIAEVVSASTGIPVAKMMQGEREKMLAMEDKLHE 567
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K+L+ +F++E +
Sbjct: 568 RVVGQTEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKSLANFLFDDENA 627
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGYIGYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 628 MIRIDMSEFMEKHSVSRLVGAPPGYIGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 687
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKI 605
ILLQ+LDDGR+TD++GR ++F+NT+I+MTSNLGS KI+EM + + IK VM V
Sbjct: 688 ILLQVLDDGRMTDSQGRVVDFKNTVIIMTSNLGSHKIQEMTNDGENYDNIKSTVMESVNT 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+I+VF L + ++ IA IQL LK +L + M L+++ A+ + +G
Sbjct: 748 HFRPEFINRIDEIVVFHPLGQADMTGIAKIQLARLKQRLKEREMGLELTDNAMNTLIAVG 807
Query: 666 FDLIYGAR 673
+D I+GAR
Sbjct: 808 YDPIFGAR 815
>gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1]
gi|49530427|emb|CAG68139.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1]
Length = 859
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/668 (59%), Positives = 538/668 (80%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L LD+ LLAG KYRGEFE+RLK +L +++ +I
Sbjct: 212 IVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAKQDGQVI 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKSDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +D+LERR+IQLK++ EA+K++ D SK + ++++I+ ++ +
Sbjct: 392 DEAASRIKMELDSKPEALDRLERRIIQLKMQLEAVKKDEDLGSKAEVKHLEEQISIVQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y ++E++W+ EK L++ ++ + ++++ R+ KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDMEEVWRAEKALVEGTKDAQVKLDQARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q ++ N K LL+ KV EIAE+VS TGIPV+K++Q EREKLL +E+ L
Sbjct: 512 ---QDEVAEENEEPK--LLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLQMESFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 605
ILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G D E ++ VM+ V
Sbjct: 687 ILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRAVVMSAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L + I IA+IQL+ L+++L + ++ L I +A + + G
Sbjct: 746 HFRPEFINRIDELVVFHSLQKSQIRGIADIQLDRLRSRLAERDIGLNIDDSAFDILIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|297183638|gb|ADI19764.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
Length = 863
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/699 (58%), Positives = 556/699 (79%), Gaps = 17/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 153 EETRQALEKYTLDLTERAAAGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 212
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I+EGLAQR++NGEVP+SL K+IL LD+A LLAG K+RG+FE+RLK +L +S + II
Sbjct: 213 IIEGLAQRVVNGEVPDSLRDKRILALDLAALLAGAKFRGDFEERLKAVLNALSKEEGRII 272
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQ +EKDAA ERRFQ
Sbjct: 273 LFVDELHTMVGAGKAEGSLDAGNMLKPALARGELHCVGATTLNEYRQSVEKDAALERRFQ 332
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V+ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 333 KVLVEEPSEEDTIAILRGLKERYEVHHSVDITDSAIIAAAKLSQRYITDRQLPDKAIDLI 392
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K++ ++ L + +I+ +E +
Sbjct: 393 DEAASRIRMEIDSKPESMDRLERRLIQLKIEREAVKKDETAAAGSELEQLTHQIDSIERE 452
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK +++ + QI+ IE+ +L ++ A R D +S++++G L +LER L
Sbjct: 453 YADLEEIWLAEKAVVQGAAQIRSLIEQTKLDLDVARRAGDLTAMSEIQHGVLPELERQL- 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
S +++ P TLL+++V EE+AE+VSR TGIP++K+++ +REKLL +E L
Sbjct: 512 -ISAANVEAPEP----TLLRSRVTDEEVAEVVSRWTGIPIAKMLEGDREKLLRMETTLHD 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EA++AVSNA+RR+R+GL+D +RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 567 RVVGQNEAVTAVSNAVRRARAGLADPQRPNGSFLFLGPTGVGKTELCKALATYLFDSDQA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+E+HS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE+EKA+ VF+
Sbjct: 627 LVRIDMSEFMEQHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDEVEKAHPKVFD 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEIIKLAVMNEVKI 605
+LLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGS+ I + G E I+ AVM V
Sbjct: 687 VLLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSELIHDAGTRLGYDE-IQAAVMARVSE 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEF+NRID+ +VF L +++I IA IQL +L ++L + ++ L +S ++ +S +G
Sbjct: 746 HFRPEFLNRIDESVVFHSLEQEHIRDIATIQLEVLTDRLAERSLRLAVSDDVMEHLSEVG 805
Query: 666 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDL 704
FD +YGAR + K+++ L+ ++P A+ + GD
Sbjct: 806 FDPVYGARPL---KRAIQQLI-----ENPLAHALLAGDF 836
>gi|358013344|ref|ZP_09145154.1| ATP-dependent chaperone ClpB [Acinetobacter sp. P8-3-8]
Length = 859
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/699 (57%), Positives = 545/699 (77%), Gaps = 14/699 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLTE+A GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTERALSGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL K++L LD+ LLAG KYRGEFE+RLK +LK+++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLKGKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKYDGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQFIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+ KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKDKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +D+L+RRLIQLK++ EA+K++ D SK + ++K+I +++ +
Sbjct: 392 DEAASRIKMEIDSKPEPLDRLDRRLIQLKMQLEAVKKDADSVSKAEVAHLEKQIEEVQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE++W EK L+ + Q + E++K R KA R+ D S+L+YG + +L++ L
Sbjct: 452 YSDLEEVWIAEKRLVDGTNQAQVELDKARTAFEKAQREGDLAEASRLQYGIIPELQKRLN 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + L++TKV EIAE+VS TGIPV+K++Q EREKLL++E L
Sbjct: 512 EEEVA-----ETNEEPKLIRTKVTENEIAEVVSAATGIPVTKMLQGEREKLLHMEEFLHN 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-IKLAVMNEVKIY 606
ILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS+ ++E+ +G + ++ ++N V +
Sbjct: 687 ILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSNDVRELGEGASDAEVRATILNAVSQH 746
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L + I IA+IQL+ L+++L ++ LK+ A + + GF
Sbjct: 747 FRPEFINRIDELVVFHSLKKSQIRGIADIQLDRLRSRLNDRDIGLKVDDQAFDILIDAGF 806
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 705
D +YGAR + K+++ + ++P A I GD I
Sbjct: 807 DPVYGARPL---KRAIQQQI-----ENPLAQKILAGDFI 837
>gi|88811113|ref|ZP_01126369.1| ClpB protein [Nitrococcus mobilis Nb-231]
gi|88791652|gb|EAR22763.1| ClpB protein [Nitrococcus mobilis Nb-231]
Length = 866
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/667 (61%), Positives = 545/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L++YTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 156 EEQRQALERYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 215
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+N EVP +L +++L+LD+ L+AG K+RG+FE+RLK +L++++ + II
Sbjct: 216 IVEGLAQRIVNAEVPGALKGRRLLVLDMGALVAGAKFRGDFEERLKAVLRDLAKQEGQII 275
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+H ++G G+ EGS+DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 276 LFIDEIHNIVGAGRAEGSMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 335
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ VEEP IE+TI+ILRGL+++YEVHHGVEITDPAIVAA+ +S RYI++R +PDKAIDLI
Sbjct: 336 KVTVEEPTIEDTIAILRGLKERYEVHHGVEITDPAIVAAATMSQRYITERKLPDKAIDLI 395
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I+IEIDSKPE MD+LERRLIQLKIE EA+ +E DE+SKKRL +++EI ++E +
Sbjct: 396 DEAASRIRIEIDSKPEAMDRLERRLIQLKIEREALAKEADEASKKRLQTVEREIEEVERQ 455
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y +LE+IW EK ++ + IKE +E+ R ++ A R D +S+L+YG + +LER L+
Sbjct: 456 YQDLEQIWDSEKAAVEGTHAIKESLEQARKELETARRAGDLTRMSELQYGRIPELERRLE 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
S+ ++Q LL+ KV EE+AE+VS+ TGIPVSK+++ ERE+LL++E L
Sbjct: 516 VASEAEMQ------DMQLLRNKVTEEEVAEVVSKWTGIPVSKMLEGERERLLHMEQALQG 569
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NAIRRSR+GL+D KRP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 570 RVIGQEEAVAAVANAIRRSRAGLADPKRPNGSFLFLGPTGVGKTELCKALATFLFDTEEA 629
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH+++RLIGAPPGY+GYE+GGYLTE +RR+PY++ILLDE+EKA++DVFN
Sbjct: 630 MVRIDMSEFMEKHAVARLIGAPPGYVGYEQGGYLTEAIRRRPYAVILLDEVEKAHADVFN 689
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD+ GRT +FRN +IVMTSNLGS I+EM + + ++ AVM V
Sbjct: 690 VLLQVLDDGRLTDSHGRTADFRNAVIVMTSNLGSQVIQEMAGEENYQAMRQAVMEIVSQQ 749
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRIDD++VF L+R+ I IA IQ+ + +L + +M +++++ AL+ ++ GF
Sbjct: 750 FRPEFINRIDDVVVFHSLDREQIQRIAEIQIAYVDRRLREQDMGIELTQEALEMLAQAGF 809
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 810 DPVYGAR 816
>gi|304413392|ref|ZP_07394865.1| ClpB molecular chaperone [Candidatus Regiella insecticola LSR1]
gi|304284235|gb|EFL92628.1| ClpB molecular chaperone [Candidatus Regiella insecticola LSR1]
Length = 857
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/662 (61%), Positives = 527/662 (79%), Gaps = 8/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LK++TIDLTE+A GKLDPVIGRD+EIRR +Q+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKQFTIDLTERAAQGKLDPVIGRDEEIRRTMQMLQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
RIINGEVP L K++L LDI LLAG K+RGEFE+RLK +L E+ + ++I+FIDEL
Sbjct: 220 LRIINGEVPEGLKGKRVLSLDIGALLAGAKFRGEFEERLKALLNELEKQKGNVILFIDEL 279
Query: 134 HTMI-GTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVE 192
HT++ G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ + V
Sbjct: 280 HTLVVGAGKSDGAMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQTVYVA 339
Query: 193 EPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAA 252
EP++E+ I+ILRGL+++YE+HH V+ITDPAIV A LS+RYISDR +PDKAIDLIDEA +
Sbjct: 340 EPNVEDAIAILRGLKERYELHHHVQITDPAIVEAVTLSHRYISDRRLPDKAIDLIDEAGS 399
Query: 253 KIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLE 312
I+++IDSKPE++D+L RR+IQLK+E +A+ +E D++SKKRL + E+ + E +Y+ LE
Sbjct: 400 SIRMQIDSKPELLDRLYRRIIQLKLEQQALNKESDDASKKRLQELNSELEQKEREYSTLE 459
Query: 313 KIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQK 372
+ WK EK +K Q+IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L +Q
Sbjct: 460 EKWKAEKAALKGIQKIKTELEQAKITLEQARRVGDLTKMSELQYGKIPELEKELDTANQ- 518
Query: 373 DIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
L N K LL +V EEIA++V+R TGIPVSK+++ ER KLL IE L RV+GQ
Sbjct: 519 ---LENETMK--LLPNRVTEEEIAKVVARWTGIPVSKMLEGERSKLLRIEQELHNRVIGQ 573
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEAI AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +FN ++++IRID
Sbjct: 574 DEAIEAVSNAIRRSRAGLADDNRPTGSFLFLGPTGVGKTELCKALAVFLFNTDKAMIRID 633
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKH++SRLIGAPPGY+GYEEGGYLTEIVRR+PYS+IL DE+EKA+ DVFNILLQ+
Sbjct: 634 MSEFMEKHAVSRLIGAPPGYVGYEEGGYLTEIVRRRPYSVILFDEVEKAHPDVFNILLQV 693
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEF 611
LD+GRLTD +GRT++FRNT+++MTSNLGS+ I E + D IK VM V +FRPEF
Sbjct: 694 LDEGRLTDGQGRTVDFRNTVVIMTSNLGSELILEHSTETDFSKIKNKVMENVSNHFRPEF 753
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INRID+IIVF L + +++SIA IQL L+ +L N + ++A L+ +S GFD +YG
Sbjct: 754 INRIDEIIVFHRLEQHHLISIAKIQLQRLQQRLAGRNYQINATEAVLELLSQRGFDPVYG 813
Query: 672 AR 673
AR
Sbjct: 814 AR 815
>gi|290476239|ref|YP_003469139.1| ATP-dependent protease [Xenorhabdus bovienii SS-2004]
gi|289175572|emb|CBJ82375.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Xenorhabdus bovienii SS-2004]
Length = 860
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/661 (61%), Positives = 537/661 (81%), Gaps = 4/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +K++L LD+ L+AG KYRGEFE+RLK +L +++ + +I+FIDEL
Sbjct: 221 QRIINAEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLNDLAKQEGSVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTVVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA A
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLIDEAGAS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+++++DSKPE +D+LERR+IQLK+E +A+K+E D+ SKKRL ++ E+ + E +Y+ LE+
Sbjct: 401 LRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDGSKKRLEMLNMELVEKEREYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E RL++ KA R D +S+++YG++ +LE+ L +
Sbjct: 461 EWKAEKAELTGTQNIKAELENTRLELEKARRSGDLAKMSEIQYGKIPELEKRLATAATAA 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
++ LL+ KV EIAEI++R TGIPVS++++ E++KLL++E+ L KRV+GQ+
Sbjct: 521 TA---ESHHMKLLRNKVTDAEIAEILARWTGIPVSRMLESEKDKLLSMEHELHKRVIGQN 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+++++++R+DM
Sbjct: 578 EAVEAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFLFDSDDAMVRLDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 638 SEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+I+MTSNLGSD I+E D +K VM V +FRPEFI
Sbjct: 698 DDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQERFGALDYTGMKDMVMEVVGHHFRPEFI 757
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+++VF L ++++ SIANIQL L ++L + + ++ AL+K+S+ GFD +YGA
Sbjct: 758 NRVDEVVVFHPLGKEHLTSIANIQLQRLYHRLEERGYQVTMTSTALEKLSDAGFDPVYGA 817
Query: 673 R 673
R
Sbjct: 818 R 818
>gi|269468202|gb|EEZ79895.1| ATP-dependent Clp protease ATP-binding subunit ClpB [uncultured
SUP05 cluster bacterium]
Length = 852
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/695 (58%), Positives = 543/695 (78%), Gaps = 16/695 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT DLT+ A GKLDPVIGRD EIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LNKYTQDLTQLAIDGKLDPVIGRDGEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP + K++L LD+A L+AG KYRGEFE+RLK +LK++ Q +I+FIDEL
Sbjct: 221 QRIINGEVPEGIKGKRVLSLDMAALVAGAKYRGEFEERLKAVLKDLEAEQGQVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKD+A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKSDGAMDAGNMLKPALARGDLHCMGATTLDEYRQYIEKDSALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+T++ILRGL++KYEVHHGVEITDPAI+AA S RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PTEEDTVAILRGLKEKYEVHHGVEITDPAIIAAVTYSTRYITDRQLPDKAIDLIDEAASQ 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MDKL+R+L+QLKIE A+K+E D++SK+R ++ I KLE +Y +LE+
Sbjct: 401 IRMEIDSKPESMDKLDRKLVQLKIERMALKKEKDKASKERFKELENTIKKLEKEYGDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK++++ +Q +KEE+E+ ++ + A R +D +S+L+YG + +LE + + D
Sbjct: 461 VWKKEKSIVQGAQHLKEELEQAKVDLESAHRNNDLAKMSELQYGVIPELEEKITQAENVD 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
TLL+ KV +EIA IV+R TGIPV K+++ E++KLL +E ++ KR+VGQD
Sbjct: 521 ------GEDMTLLRNKVTEDEIAHIVARWTGIPVDKMMEGEKDKLLQMEEIIHKRLVGQD 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
+A+ +S+A+RRSR+GLSD RP GSF+F+GPTGVGKTEL K L+ +F+ E++I+R+DM
Sbjct: 575 KAVKVISDAVRRSRAGLSDPNRPDGSFLFMGPTGVGKTELTKALADFLFDTEQAIVRLDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYE+GG LTE +RRKPYS+ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEQGGVLTEAIRRKPYSIILLDEIEKAHPDVFNVLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD--KEIIKLAVMNEVKIYFRPEF 611
DDGRLTD +GRT++F+NT+IVMTSNLGS I++ D E+IKL V +FRPEF
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIQDNPGKDIQSELIKL-----VGEHFRPEF 749
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NRID+I+VF L + I IA +Q++ILK++L +N+ L +S A+ I + G+D ++G
Sbjct: 750 VNRIDEIVVFNGLEKNQIKGIAVLQIDILKSRLEDLNLKLNLSDVAMTLIVDRGYDPVFG 809
Query: 672 ARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
AR + K+++ LL+ + A G IN
Sbjct: 810 ARPL---KRTIQQLLENPLSQKILAGEFLPGSTIN 841
>gi|388256844|ref|ZP_10134025.1| ClpB [Cellvibrio sp. BR]
gi|387940544|gb|EIK47094.1| ClpB [Cellvibrio sp. BR]
Length = 885
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/684 (60%), Positives = 546/684 (79%), Gaps = 30/684 (4%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 162 LEKYTVDLTARAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 221
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+ LLAG K+RG+FE+RLK ++ E+S + +I+FIDE+
Sbjct: 222 QRIVNGEVPEGLKNKRLLSLDLGGLLAGAKFRGDFEERLKSVINELSKQEGRVILFIDEI 281
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+ V+E
Sbjct: 282 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVQVDE 341
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P+ +TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 342 PNESDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLIDEAASR 401
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD+LERRLIQ KIE EA++++ DE+SKKRL + ++I+K E + +LE+
Sbjct: 402 IRMEIDSKPEEMDRLERRLIQFKIEREAVRKDEDEASKKRLAKLDQDIDKFERELNDLEE 461
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK ++ SQ+IK ++E+ RL++ + RK D +S+L+YG + +LE+ L Q +
Sbjct: 462 IWRAEKAALQGSQEIKSQLEQARLELEEKRRKGDLARMSELQYGIIPQLEKQLDMAGQAE 521
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E L KRV+GQ
Sbjct: 522 MM------EMKLLRNKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRMEEALHKRVIGQH 575
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSR+GLSDA RP GSF+FLGPTGVGKTELCK+L+ +F+ ++++RIDM
Sbjct: 576 EAVVAVANAVRRSRAGLSDANRPNGSFLFLGPTGVGKTELCKSLAEFLFDTADAMVRIDM 635
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 636 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL 695
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--------DKEI----------- 594
DDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ + D +
Sbjct: 696 DDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELAEDRSFDTVSFDTSVSEDMNNSLNNE 755
Query: 595 -----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 649
+K AVM V +FRPEFINRID+++VF L R+ I IA+IQL +L+ +L + +
Sbjct: 756 NRYNAMKDAVMEVVGSHFRPEFINRIDEVVVFHPLGREQIRGIADIQLELLRKRLGEREL 815
Query: 650 DLKISKAALKKISNIGFDLIYGAR 673
L++ A + K++N+GFD +YGAR
Sbjct: 816 SLELDDAVMNKLANVGFDPVYGAR 839
>gi|399265|sp|P17422.2|CLPB_DICNO RecName: Full=Chaperone protein ClpB
Length = 860
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/666 (60%), Positives = 541/666 (81%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G LKKYT+D+T++ GK+DPVIGRD+EIRRA+Q+LQRRSKNNPVLIGEPGVGKTA
Sbjct: 159 EDKRGALKKYTLDVTQRPLDGKIDPVIGRDEEIRRAMQILQRRSKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI + VP SL K++L LD+A LLAGTKYRGEFE+RLK +L EI+ II
Sbjct: 219 IVEGLAQRIADRAVPESLKGKRLLSLDLAALLAGTKYRGEFEERLKAVLDEITKADGQII 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RG+LHCIGATTL+EYRQY+EKDAA ERRFQ
Sbjct: 279 LFIDEIHTMVGAGKSEGSLDAGNMLKPALARGDLHCIGATTLDEYRQYMEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K++V+EP +E+TI+ILR LQ++YEVHHG+ ITDPA+VAA++LS+RYIS R +PDKAIDL+
Sbjct: 339 KVIVDEPSVEDTIAILRNLQERYEVHHGINITDPALVAAAQLSHRYISGRKLPDKAIDLM 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA+I++E+DSKPE+MDK++RRLIQL+IE A+++E D +SK+RL ++ EI E +
Sbjct: 399 DEAAAQIRMELDSKPEVMDKIDRRLIQLQIERMALEKETDAASKRRLSDLEAEIAAQEKE 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + +IKE+++K+R+++ A R+ D+ S+++YG + E+ L
Sbjct: 459 YADLEEIWLAEKAGNAGAAEIKEQLDKLRVELEAAKRRGDFARASEIQYGLIPAKEKQLL 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E Q+ Q P+ L++ KV +EEIAEIVSR TGIPV+K+++ E+E+LL++E +L +
Sbjct: 519 ENEQQTEQRPHR-----LMRNKVTAEEIAEIVSRWTGIPVAKMMEGEKERLLHLETVLNE 573
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ A+ AV+NAIRR+R+GLSD KRP GSF+FLGPTGVGKTELC+TL+ +F++EE+
Sbjct: 574 RVVGQKTAVEAVANAIRRNRAGLSDPKRPIGSFLFLGPTGVGKTELCRTLAQFLFDSEEN 633
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GY++GGYLTE VRRKPYS++L DE+EKA+SDVFN
Sbjct: 634 MVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRKPYSVVLFDEVEKAHSDVFN 693
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
LLQ+LD+GRLTD +GRT++FR+T+I+MTSNLGSD I+ + + E +K AVM V +F
Sbjct: 694 TLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSDMIQLLAEKSYEEMKSAVMEIVMAHF 753
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ IVF L + ++ IA IQL L+ +L + L + + A+ ++ +G+D
Sbjct: 754 RPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLSVEEDAINQLVELGYD 813
Query: 668 LIYGAR 673
++GAR
Sbjct: 814 PLFGAR 819
>gi|94676876|ref|YP_588651.1| ATP-dependent chaperone protein ClpB [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|94220026|gb|ABF14185.1| ATP-dependent chaperone protein ClpB [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
Length = 862
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/661 (60%), Positives = 526/661 (79%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LK++TI+LTE A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 164 LKQFTINLTELAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 223
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L + ++L LD+ L+AG+KYRGEFE+RLK +L E+S + +II+FIDEL
Sbjct: 224 QRIVNGEVPEGLKNNRVLSLDMGALVAGSKYRGEFEERLKAVLNELSKLEGNIILFIDEL 283
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP LSRGELHC+GATTLNEYR +IEKDAA ERRFQK+ + E
Sbjct: 284 HTMVGAGKADGAMDAGNMLKPALSRGELHCVGATTLNEYRTFIEKDAALERRFQKVFIVE 343
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYI+DR +PDKAIDLIDEAA+
Sbjct: 344 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNRYIADRQLPDKAIDLIDEAASS 403
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+LERR+IQLK+E +A+++E D++S KRL ++ KE+ + E YA LEK
Sbjct: 404 IRMQIDSKPEELDRLERRMIQLKLEQQALQKELDDASLKRLKILNKELAQKEHAYAKLEK 463
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
W+ EK + +Q+IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 464 EWQAEKVSLSGAQKIKSELEQTKIYLEQARRIGDLARMSELQYGKIPELEKKLA------ 517
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ L + LL+ +V EI E+++R TGIPVS++++ ER K+L IE L +RVVGQ+
Sbjct: 518 VVLQSEGKNMRLLRNRVTEMEITEVLARWTGIPVSRMLESERTKILRIEQYLHQRVVGQN 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+G++D RP GSFMFLGPTGVGKTELCK L+A +F+++ +I+RIDM
Sbjct: 578 EAVEAVSNAIRRSRAGIADPNRPIGSFMFLGPTGVGKTELCKALAAFVFDSDTAIVRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+E+HS+SR++GAPPGYIGYEEGG LTE VRR+PYS+ILLDEIEKA+ D+FN+LLQ+L
Sbjct: 638 SEFMERHSVSRMVGAPPGYIGYEEGGSLTEAVRRRPYSVILLDEIEKAHIDIFNLLLQLL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
+DGRLTD GRT+NFRNTI++MTSNLGSD I E + + +K V++ V +FRPEFI
Sbjct: 698 EDGRLTDGHGRTVNFRNTIVIMTSNLGSDVINERFHQINYHDMKNIVVDVVCHHFRPEFI 757
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+I+VF L +++L IA IQL L +L + + + IS L + GFD IYGA
Sbjct: 758 NRIDEIVVFHPLGHEDMLKIAQIQLQRLSKRLEEQGISITISDQVLTLLVKTGFDFIYGA 817
Query: 673 R 673
R
Sbjct: 818 R 818
>gi|319760324|ref|YP_004124262.1| chaperone protein ClpB [Candidatus Blochmannia vafer str. BVAF]
gi|318039038|gb|ADV33588.1| chaperone protein ClpB [Candidatus Blochmannia vafer str. BVAF]
Length = 862
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/662 (61%), Positives = 530/662 (80%), Gaps = 8/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKK+T+D+T+ A G LDPVIGRD+EIRR IQVLQRR+KNNPVLIG PGVGKTAIVEGLA
Sbjct: 162 LKKFTVDITKFAEQGNLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGNPGVGKTAIVEGLA 221
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP+ L + +IL LDIA LLAGTKYRGEFE+R KK+L + + +II+FIDEL
Sbjct: 222 QRIINGEVPDGLKNSRILSLDIAALLAGTKYRGEFEERFKKVLNSLVSKDSNIILFIDEL 281
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
H M+G GK +G++DA NM+KP+L+RGELHC+GATT +EY +YIEKDAA ERRFQKI + E
Sbjct: 282 HVMVGAGKTDGAMDASNMIKPKLARGELHCVGATTFDEYSKYIEKDAALERRFQKIFIIE 341
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P+I++TI+ILRGL+++YE+HH V ITDPAIVAA+ LS RYISDR +PDKAIDLIDEAA+
Sbjct: 342 PNIKDTIAILRGLKERYELHHNVHITDPAIVAAATLSKRYISDRQLPDKAIDLIDEAASS 401
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+I+IDSKPE +D+L+RR+IQLK+E +A+K+E D++SKKRL ++KKE+ + E Y LE
Sbjct: 402 IRIQIDSKPEDLDRLDRRIIQLKLEKQALKKESDKASKKRLEILKKELMEQESAYLVLES 461
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK+ + D Q IK ++EK ++ + +A R D +S+L+YG + LE+ L +Q
Sbjct: 462 EWKREKSSLSDIQNIKSDLEKAKIALEQARRFGDLDKMSELQYGSIPSLEKKLLNATQ-- 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+N K LL+ V EIAE++S+ TGIP+S+I+ E+ KLLN+E +L + V+GQD
Sbjct: 520 ----SNNKKMRLLRNYVSETEIAEVLSKWTGIPISRILTNEKCKLLNMEKILHQLVIGQD 575
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
+A+ +VSNAIRRSRSGLSD KRP GSFMFLGPTGVGKTELCK+LS +F+ + +++RIDM
Sbjct: 576 DAVQSVSNAIRRSRSGLSDPKRPIGSFMFLGPTGVGKTELCKSLSYFLFDTDSAMVRIDM 635
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+S+L+GAPPGYIGYE GGYLTE VRR+PYS++LLDEIEKA+SD+FN+LLQ+L
Sbjct: 636 SEFMEKHSVSKLLGAPPGYIGYETGGYLTEAVRRRPYSIVLLDEIEKAHSDIFNVLLQVL 695
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTDN+GRTINF NT+++MTSNLGSD I K+ + D +K V+N V YF+PEFI
Sbjct: 696 DDGRLTDNQGRTINFSNTVMIMTSNLGSDLIQKKFKSLDYFEMKTMVLNVVNQYFKPEFI 755
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL-KISKAALKKISNIGFDLIYG 671
NRID+I+VF LN ++++ IANIQL L ++L + I+K AL +S IG+D +YG
Sbjct: 756 NRIDEIVVFHPLNIEHLIKIANIQLKELCHRLEEKGYPCTHITKEALLFLSKIGYDSVYG 815
Query: 672 AR 673
AR
Sbjct: 816 AR 817
>gi|244539339|dbj|BAH83382.1| protein disaggregation chaperone [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 723
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/662 (59%), Positives = 530/662 (80%), Gaps = 9/662 (1%)
Query: 13 YLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGL 72
YLKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGL
Sbjct: 28 YLKKYTIDLTEQAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 87
Query: 73 AQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDE 132
AQRIIN EVP L + ++L LD+A L+AG K+RGEFE+RLK +L ++S ++I+F+DE
Sbjct: 88 AQRIINNEVPEGLKNNRVLSLDLASLVAGAKFRGEFEERLKNLLNDLSKQDGNVILFVDE 147
Query: 133 LHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVE 192
LH M+GTGKV+GS+DAGNMLKP L+RGELHCIGATTL+EYR YIEKDAA ERRFQK+++
Sbjct: 148 LHNMVGTGKVDGSMDAGNMLKPALARGELHCIGATTLDEYRNYIEKDAALERRFQKVIIA 207
Query: 193 EPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAA 252
EP+IE+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 208 EPNIEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYITDRQLPDKAIDLIDEAAS 267
Query: 253 KIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLE 312
I+++IDSKPE +D+LERR+IQLKIEH+A+++E DE+S KR +++ E+ K E +Y L
Sbjct: 268 NIRLQIDSKPEFLDRLERRIIQLKIEHQALQKESDEASVKRFTMLESELKKKEQEYKKLV 327
Query: 313 KIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQK 372
+ W+ EK + +Q IK ++E+ R+ + +A R D +S+L+YG + +++ L +Q
Sbjct: 328 QEWQTEKESLDRAQHIKAKLEQARISLEQARRVGDLAKMSELQYGTIPTIKKELARATQ- 386
Query: 373 DIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
N LL+ +V EIAE+++++TGIPV+++++ E+ KLL +E +L RV+GQ
Sbjct: 387 -------GNTIKLLRNRVTDVEIAEVLAKSTGIPVARMMEEEKNKLLRMEQVLHTRVIGQ 439
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
+ A+ A+SNAIRRSR+GL+D KRP GSF+FLGPTGVGKTELCK L+ +F+N+++++RID
Sbjct: 440 NGAVEAISNAIRRSRTGLADPKRPVGSFLFLGPTGVGKTELCKALANFLFDNDDAMVRID 499
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGYIGYE+GGYLTE +RR PYS++LLDEIEKA+ DVFNILLQ+
Sbjct: 500 MSEFMEKHSVARLIGAPPGYIGYEKGGYLTEAIRRHPYSVVLLDEIEKAHFDVFNILLQV 559
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEF 611
LDDGRLTD+ GRTI+FRNT+++MTSN+GS+ I++ K E IK +M+ +K +FRPEF
Sbjct: 560 LDDGRLTDSHGRTIDFRNTVVIMTSNIGSEVIRDKFNKLHYEEIKKLIMDMLKNFFRPEF 619
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
INR+D++IVF L+ ++I I IQL L +L K + I ++ ++ G+D IYG
Sbjct: 620 INRVDEVIVFHPLSEQHIKDIVKIQLQKLSKRLEKSGYKIHIFDNVIEFLAKQGYDPIYG 679
Query: 672 AR 673
AR
Sbjct: 680 AR 681
>gi|418020213|ref|ZP_12659521.1| ATP-dependent chaperone ClpB [Candidatus Regiella insecticola
R5.15]
gi|347604417|gb|EGY29075.1| ATP-dependent chaperone ClpB [Candidatus Regiella insecticola
R5.15]
Length = 856
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/661 (60%), Positives = 524/661 (79%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LK++TIDLTE A GKLDPVIGRD EIR +Q+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKQFTIDLTEHAEQGKLDPVIGRDKEIRHTMQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
RIINGEVP L K++L LDI LLAG K+RGEFE+RLK +L E+ + ++I+FIDEL
Sbjct: 220 LRIINGEVPEGLKGKRVLSLDIGALLAGAKFRGEFEERLKALLSELEKQEGNVILFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ + V E
Sbjct: 280 HTLVGAGKSDGAMDAGNMLKPALARGKLHCVGATTLDEYRQYIEKDAALERRFQTVYVAE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P+IE+ ++ILRGL+++YE+HH V+ITDPAIV A LS+RYISDR +PDKAIDLIDEA +
Sbjct: 340 PNIEDAVAILRGLKERYELHHHVQITDPAIVEAVTLSHRYISDRRLPDKAIDLIDEAGSS 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D L RR+IQLK+E +A+ +E D++SKKRL + E+ + E +Y+ LE+
Sbjct: 400 IRMQIDSKPEPLDLLYRRIIQLKLEQQALNKESDDASKKRLQELNNELEQKEREYSTLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK +K +Q+IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L +
Sbjct: 460 EWKAEKAALKGTQKIKTELEQAKITLEQARRVGDLTKMSELQYGKIPELEKELDTAN--- 516
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
QL N K LL +V EEIA++V+R TGIPVSK+++ ER KLL IE L RV+GQD
Sbjct: 517 -QLENKTMK--LLPNRVTEEEIAKVVARWTGIPVSKMLEGERSKLLRIEQELHNRVIGQD 573
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVSNAIRRSR+G++D RP GSF+FLGPTGVGKTELCK L+ +F+ ++++IRIDM
Sbjct: 574 EAIEAVSNAIRRSRAGIADDNRPTGSFLFLGPTGVGKTELCKALAVFLFDTDKAMIRIDM 633
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRLIGAPPGY+GYEEGGYLTEIVRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 634 SEFMEKHTVSRLIGAPPGYVGYEEGGYLTEIVRRRPYSVILLDEVEKAHPDVFNILLQVL 693
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 612
D+GRLTD +G+T++FRNT+I+MTSNLGS+ I+ + D IK VM V +FRPEFI
Sbjct: 694 DEGRLTDGQGKTVDFRNTVIIMTSNLGSELIQAHSTEVDFSKIKNKVMESVSNHFRPEFI 753
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+IIVF L + +++SIA IQL L+ +L + N + ++A L +S GFD +YGA
Sbjct: 754 NRIDEIIVFHRLEQHHLISIAKIQLQRLQQRLAERNYQISATEAVLDLLSQRGFDPVYGA 813
Query: 673 R 673
R
Sbjct: 814 R 814
>gi|119946869|ref|YP_944549.1| chaperone ClpB [Psychromonas ingrahamii 37]
gi|119865473|gb|ABM04950.1| chaperone ClpB containing ATPase AAA-2 domain [Psychromonas
ingrahamii 37]
Length = 857
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/661 (60%), Positives = 530/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLTE+A GKLDPVIGRDDE+RR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LVKYTIDLTEQAEQGKLDPVIGRDDEVRRMIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + II+FIDEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLSELSKEEGKIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGDLHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHKVEITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +DKLER++IQLK+E +A++ + DE+S KRL ++ + + E + L+K
Sbjct: 401 IRLQMDSKPEELDKLERKIIQLKLEEKALQNDTDEASIKRLADLESALAEKEQAFLALDK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W+ EK + +Q IK+ IE+ RL + A+R D +S+L+YG + LE+ L + +Q +
Sbjct: 461 VWRAEKAALSGTQNIKQSIEQARLDLEVASRAVDLTRMSELQYGVIPALEKQLVQAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLLK V EIAEI++ TGIPV+K+++ ER+KLL +E L RV+GQ+
Sbjct: 521 MQ------ETTLLKHAVTENEIAEILAHWTGIPVAKMLEGERDKLLKMETHLHSRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI A++NAIRRSR+GLSD RP GSF+FLGPTGVGKTE CK L+ +F++E++++RIDM
Sbjct: 575 EAIDAIANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTESCKALANFLFDSEDNMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EK S+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKFSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+I+MTSN+GSD I+E +K + IK +++ + F+PEF+
Sbjct: 695 DDGRLTDGQGRTVSFRNTVIIMTSNIGSDIIQEKFDKVSYDEIKSYLLDILASQFKPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L R++I SIA IQL L+ +L + + + A++ + + G+D +YGA
Sbjct: 755 NRIDETVVFHPLGREHIKSIAEIQLRSLQKRLTDKDYLVTFTDQAIQLLVDAGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|297172751|gb|ADI23717.1| hypothetical protein [uncultured Oceanospirillales bacterium
HF4000_21D01]
Length = 889
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/666 (60%), Positives = 527/666 (79%), Gaps = 12/666 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KY +D+TE+A G+LDPVIGRD EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 177 LSKYCVDVTERAENGELDPVIGRDAEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 236
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L KKIL LD+ L+AG K+RGEFE+RLK +L E+S + II+FIDEL
Sbjct: 237 QRIVNGEVPEGLKGKKILSLDMGSLIAGAKFRGEFEERLKAVLNELSKQEGSIILFIDEL 296
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQ+IEKDAA ERRFQK+LVEE
Sbjct: 297 HTMVGAGKAEGAMDAGNMLKPALARGDLHCVGATTLDEYRQFIEKDAALERRFQKVLVEE 356
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P+ E+TI+ILRGL+++YEVHHGV+I+D AI+AA++LS RYI+DR +PDKAIDLIDEAA+
Sbjct: 357 PNEEDTIAILRGLKERYEVHHGVDISDSAIIAAAKLSQRYITDRQLPDKAIDLIDEAASM 416
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MD LERRLIQLKIE EA+K++ D + KR + ++I +LE +YA+LE+
Sbjct: 417 IRMEIDSKPEEMDMLERRLIQLKIEQEALKKDEDPPALKRKAKLAEDIQELEKEYADLEE 476
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q I+ +EK R + A R D +S+++YG + LE L + +
Sbjct: 477 IWKAEKASLQGTQIIRSSLEKARSDMELARRAGDLARMSEIQYGIIPGLEEKLTTAAAAE 536
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ +V EEIA++VSR TGIPVSK+++ ++ KLL++E L +RV+GQ
Sbjct: 537 AAEKQ------LLRNRVTEEEIADVVSRATGIPVSKMLEEDKLKLLDMEAALHRRVIGQH 590
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NA+RRSRSGLSD RP GSFMFLGPTGVGKTELCK L+ +F+ E++++RIDM
Sbjct: 591 EAVVAVANAVRRSRSGLSDPNRPNGSFMFLGPTGVGKTELCKALAEFLFDTEDAMVRIDM 650
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+E+HS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 651 SEFMERHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFNILLQVL 710
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK-----EIIKLAVMNEVKIYF 607
DDGRLTD GRT++FRNT+IVMTSNLGSD+I+E ME G E +K V++ V +F
Sbjct: 711 DDGRLTDGHGRTVDFRNTVIVMTSNLGSDRIQELMETGADDEESYEAVKKIVLDVVAKHF 770
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
PEF+NRID+ +VF L ++ I +IA IQL +L +L+ + LK+S A L I++ G+D
Sbjct: 771 SPEFVNRIDETVVFHPLGKEQIRAIAEIQLELLNQRLVNNELALKVSDAVLDHIASTGYD 830
Query: 668 LIYGAR 673
+YGAR
Sbjct: 831 PVYGAR 836
>gi|71891969|ref|YP_277699.1| ATP-dependent protease [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796075|gb|AAZ40826.1| ATP-dependent protease [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 858
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/662 (61%), Positives = 528/662 (79%), Gaps = 8/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T+D+T+ A G LDPVIGRD+EIRR IQVLQRR+KNNPVLIG+PGVGKTAIVEGLA
Sbjct: 161 LQKFTVDITKFAEQGNLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGQPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +IL LD+ LLAGTKYRGEFE+RLK +L ++S +II+FIDEL
Sbjct: 221 QRIINGEVPEGLKHSRILALDMGGLLAGTKYRGEFEERLKSVLSDVSKEDSNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DA NMLKP LSRGELHC+GATTL+EY +YIEKDAA ERRFQKI V E
Sbjct: 281 HTMVGAGKTDGAMDASNMLKPRLSRGELHCVGATTLDEYSKYIEKDAALERRFQKIFVSE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHNVHITDPAIVAAAILSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL L+ E+ + E Y NLEK
Sbjct: 401 IRIQIDSKPEELDRLERRIIQLKLEQQALKKESDDASMKRLNLLTTELIQKEQNYINLEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + ++Q IK ++E+ ++ I++A R D +S+L+YG++ +LE+ L
Sbjct: 461 EWKKEKVSLSNAQSIKSDLEQAKIAIDQARRVGDLARMSELQYGKIPELEKKLS------ 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
L +N K LL+ +V EIA ++SR TGIPVS+++ E++KLL++E+ L + VVGQ
Sbjct: 515 TILQSNYKKIRLLRNRVTDIEIAAVLSRWTGIPVSRMLASEKDKLLDMEHSLHQLVVGQH 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ A+S+AIRRSRSGLSD KRP GSFMFLGPTGVGKTELCK LS +F+ +++RIDM
Sbjct: 575 EAVKAISHAIRRSRSGLSDLKRPIGSFMFLGPTGVGKTELCKALSIFLFDTNNAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+S+L+GAPPGYIGYE GGYLTE +RR+PYS+ILLDEIEKA+S++FN+LLQ+L
Sbjct: 635 SEFMEKHSVSKLLGAPPGYIGYESGGYLTESIRRRPYSIILLDEIEKAHSEIFNVLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD GRT++F NT+I+MTSNLGSD I K D + +K+AV+N V +FRPEF+
Sbjct: 695 DDGRLTDGHGRTVHFNNTVIIMTSNLGSDFIQKRFGIVDYQEVKVAVLNIVNQHFRPEFV 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM-DLKISKAALKKISNIGFDLIYG 671
NRID+I+VF L+ ++++ IA+IQL L ++L + + I+ A L +S IGFD +YG
Sbjct: 755 NRIDEIVVFHPLSTEHLMKIASIQLQRLCDRLEEKGYPNTNITNAVLVFLSKIGFDPVYG 814
Query: 672 AR 673
AR
Sbjct: 815 AR 816
>gi|440509763|ref|YP_007347199.1| Chaperone protein ClpB [Candidatus Blochmannia chromaiodes str.
640]
gi|440453976|gb|AGC03468.1| Chaperone protein ClpB [Candidatus Blochmannia chromaiodes str.
640]
Length = 858
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/662 (60%), Positives = 529/662 (79%), Gaps = 8/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+T+D+T+ A G LDPVIGRD+EIRR IQVLQRR+KNNPVLIG+PGVGKTAIVEGLA
Sbjct: 161 LQKFTVDITKFAEQGNLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGQPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L ++L LD+ LLAGTKYRGEFE+RLK +L ++S +II+FIDEL
Sbjct: 221 QRIINGEVPEGLKHSRVLALDMGGLLAGTKYRGEFEERLKSVLSDVSKEDSNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DA NMLKP LSRGELHC+GATTL+EY +YIEKDAA ERRFQKI V E
Sbjct: 281 HTMVGAGKTDGAMDASNMLKPRLSRGELHCVGATTLDEYSKYIEKDAALERRFQKIFVSE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHNVHITDPAIVAAAILSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL L+ E+ + E Y NLEK
Sbjct: 401 IRIQIDSKPEELDRLERRIIQLKLEQQALKKESDDASMKRLNLLTTELIQKEKNYINLEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + ++Q IK ++E+ ++ I++A R D +S+L+YG++ +LE+ L
Sbjct: 461 EWKKEKVSLSNAQSIKSDLEQAKIAIDQARRVGDLARMSELQYGKIPELEKKLS------ 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
L +N K LL+ +V EIA ++SR TGIPVS+++ E++KLL++E+ L + VVGQ
Sbjct: 515 TILQSNYKKIRLLRNRVTDIEIAAVLSRWTGIPVSRMLASEKDKLLDMEHSLHQLVVGQH 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ A+S+AIRRSRSGLSD KRP GSFMFLGPTGVGKTELCK LS +F+ ++++RIDM
Sbjct: 575 EAVKAISHAIRRSRSGLSDLKRPIGSFMFLGPTGVGKTELCKALSIFLFDTNKAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+S+L+GAPPGYIGYE GGYLTE +RR+PYS+ILLDEIEKA+S++FN+LLQ+L
Sbjct: 635 SEFMEKHSVSKLLGAPPGYIGYESGGYLTESIRRRPYSIILLDEIEKAHSEIFNVLLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD GRT++F NT+I+MTSNLGSD I K D + +K+AV+N V +FRPEF+
Sbjct: 695 DDGRLTDGHGRTVHFNNTVIIMTSNLGSDFIQKRFGIVDYQEVKVAVLNIVNQHFRPEFV 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM-DLKISKAALKKISNIGFDLIYG 671
NRID+I+VF L+ ++++ IA+IQL L ++L + + I+ A L +S IGFD +YG
Sbjct: 755 NRIDEIVVFHPLSTEHLMKIASIQLQRLCDRLEEKGYPNTNITNAVLVFLSKIGFDPVYG 814
Query: 672 AR 673
AR
Sbjct: 815 AR 816
>gi|416243668|ref|ZP_11634003.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC7]
gi|326568620|gb|EGE18691.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC7]
Length = 858
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/666 (59%), Positives = 533/666 (80%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNNPVLIGE GVGKTA
Sbjct: 152 EQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEAGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK +L E++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKAVLNELAKQDGNII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 272 LFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDPALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++ ++++I+ + +
Sbjct: 392 DEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQVKSLEQQIDDAQKQ 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L+YGE+ LE+ L
Sbjct: 452 YSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQLQYGEIIALEKQLA 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q ER KLL +E++L +
Sbjct: 512 EEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGERNKLLAMEDVLHE 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL K L+ +F++E++
Sbjct: 567 RVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELTKALANFLFDSEDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E IK AVM V +F
Sbjct: 687 ILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSSYEDIKTAVMASVTGHF 746
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S A+ + ++G+D
Sbjct: 747 RPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVSDEAMNHLVSVGYD 806
Query: 668 LIYGAR 673
++GAR
Sbjct: 807 PVFGAR 812
>gi|416247887|ref|ZP_11635979.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC8]
gi|326568746|gb|EGE18816.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC8]
Length = 858
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/666 (59%), Positives = 533/666 (80%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNNPVLIGE GVGKTA
Sbjct: 152 EQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEAGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK +L E++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKAVLNELAKQDGNII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 272 LFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDPALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++ ++++I+ + +
Sbjct: 392 DEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQVKSLEQQIDDAQKQ 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L+YGE+ LE+ L
Sbjct: 452 YSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQLQYGEIIALEKQLA 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q ER KLL +E++L +
Sbjct: 512 EEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGERNKLLAMEDVLHE 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL K L+ +F++E++
Sbjct: 567 RVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELTKALANFLFDSEDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E IK AVM V +F
Sbjct: 687 ILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPYEDIKTAVMTSVTGHF 746
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S A+ + ++G+D
Sbjct: 747 RPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVSDEAMNHLVSVGYD 806
Query: 668 LIYGAR 673
++GAR
Sbjct: 807 PVFGAR 812
>gi|416218528|ref|ZP_11624942.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 7169]
gi|326559576|gb|EGE09990.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 7169]
Length = 858
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/666 (59%), Positives = 533/666 (80%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNNPVLIGE GVGKTA
Sbjct: 152 EQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEAGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK +L E++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKAVLNELAKQDGNII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 272 LFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDPALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++ ++++I+ + +
Sbjct: 392 DEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQVKSLEQQIDDAQKQ 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L+YGE+ LE+ L
Sbjct: 452 YSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQLQYGEIIALEKQLA 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q ER KLL +E++L +
Sbjct: 512 EEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGERNKLLAMEDVLHE 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL K L+ +F++E++
Sbjct: 567 RVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELTKALANFLFDSEDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E IK AVM V +F
Sbjct: 687 ILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSSYEDIKTAVMASVTGHF 746
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S A+ + ++G+D
Sbjct: 747 RPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVSDEAMNHLVSVGYD 806
Query: 668 LIYGAR 673
++GAR
Sbjct: 807 PVFGAR 812
>gi|416234148|ref|ZP_11629697.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 12P80B1]
gi|326565494|gb|EGE15665.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 12P80B1]
Length = 858
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/666 (59%), Positives = 533/666 (80%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNNPVLIGE GVGKTA
Sbjct: 152 EQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEAGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK +L E++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKAVLNELAKQDGNII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 272 LFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDPALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++ ++++I+ + +
Sbjct: 392 DEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQVKSLEQQIDDAQKQ 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L+YGE+ LE+ L
Sbjct: 452 YSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQLQYGEIIALEKQLA 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q ER KLL +E++L +
Sbjct: 512 EEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGERNKLLAMEDVLHE 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL K L+ +F++E++
Sbjct: 567 RVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELTKALANFLFDSEDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E IK AVM V +F
Sbjct: 687 ILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPYEDIKTAVMASVTGHF 746
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S A+ + ++G+D
Sbjct: 747 RPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVSDEAMNHLVSVGYD 806
Query: 668 LIYGAR 673
++GAR
Sbjct: 807 PVFGAR 812
>gi|296113575|ref|YP_003627513.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis RH4]
gi|295921269|gb|ADG61620.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BBH18]
Length = 858
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/666 (59%), Positives = 533/666 (80%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNNPVLIGE GVGKTA
Sbjct: 152 EQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEAGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK +L E++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKAVLNELAKQDGNII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 272 LFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDPALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++ ++++I+ + +
Sbjct: 392 DEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQVKSLEQQIDDAQKQ 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L+YGE+ LE+ L
Sbjct: 452 YSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQLQYGEIIALEKQLA 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q ER KLL +E++L +
Sbjct: 512 EEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGERNKLLAMEDVLHE 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL K L+ +F++E++
Sbjct: 567 RVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELTKALANFLFDSEDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E IK AVM V +F
Sbjct: 687 ILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPYEDIKTAVMASVTRHF 746
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S A+ + ++G+D
Sbjct: 747 RPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVSDEAMNHLVSVGYD 806
Query: 668 LIYGAR 673
++GAR
Sbjct: 807 PVFGAR 812
>gi|416227810|ref|ZP_11627294.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 46P47B1]
gi|416252188|ref|ZP_11638023.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis CO72]
gi|421780382|ref|ZP_16216871.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis RH4]
gi|326564678|gb|EGE14896.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 46P47B1]
gi|326572614|gb|EGE22603.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis CO72]
gi|407812538|gb|EKF83323.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis RH4]
Length = 858
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/666 (59%), Positives = 533/666 (80%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNNPVLIGE GVGKTA
Sbjct: 152 EQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEAGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK +L E++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKAVLNELAKQDGNII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 272 LFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDPALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++ ++++I+ + +
Sbjct: 392 DEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQVKSLEQQIDDAQKQ 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L+YGE+ LE+ L
Sbjct: 452 YSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQLQYGEIIALEKQLA 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q ER KLL +E++L +
Sbjct: 512 EEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGERNKLLAMEDVLHE 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL K L+ +F++E++
Sbjct: 567 RVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELTKALANFLFDSEDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E IK AVM V +F
Sbjct: 687 ILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPYEDIKTAVMASVTGHF 746
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S A+ + ++G+D
Sbjct: 747 RPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVSDEAMNHLVSVGYD 806
Query: 668 LIYGAR 673
++GAR
Sbjct: 807 PVFGAR 812
>gi|416238939|ref|ZP_11631622.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC1]
gi|326567744|gb|EGE17850.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC1]
Length = 858
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/666 (59%), Positives = 532/666 (79%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNNPVLIGE GVGKTA
Sbjct: 152 EQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEAGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK +L E++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKAVLNELAKQDGNII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 272 LFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDPALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++ ++++I+ + +
Sbjct: 392 DEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQVKSLEQQIDDAQKQ 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK ++ S+Q + +++ R+ + KA R+ D+ S+L+YGE+ LE+ L
Sbjct: 452 YSELEEVWKAEKVGVEKSKQFQAKLDTARITLEKALREGDYARASQLQYGEIIALEKQLA 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q ER KLL +E++L +
Sbjct: 512 EEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGERNKLLAMEDVLHE 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL K L+ +F++E++
Sbjct: 567 RVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELTKALANFLFDSEDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E IK AVM V +F
Sbjct: 687 ILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSSYEDIKTAVMASVTGHF 746
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S A+ + ++G+D
Sbjct: 747 RPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVSDEAMNHLVSVGYD 806
Query: 668 LIYGAR 673
++GAR
Sbjct: 807 PVFGAR 812
>gi|416157355|ref|ZP_11605098.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 101P30B1]
gi|416224348|ref|ZP_11626489.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 103P14B1]
gi|416255816|ref|ZP_11639385.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis O35E]
gi|326562685|gb|EGE12987.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 103P14B1]
gi|326574211|gb|EGE24159.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 101P30B1]
gi|326574996|gb|EGE24925.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis O35E]
Length = 858
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/666 (58%), Positives = 532/666 (79%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNNPVLIGE GVGKTA
Sbjct: 152 EQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEAGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK +L E++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKAVLNELAKQDGNII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKD A ERRFQ
Sbjct: 272 LFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDPALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++ ++++I+ + +
Sbjct: 392 DEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQVKSLEQQIDDAQKQ 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L+YGE+ LE+ L
Sbjct: 452 YSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQLQYGEIIALEKQLA 511
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E+ + P + K LL+ KV EIAE+VS TGIPV+K++Q ER KLL +E++L +
Sbjct: 512 EEQTDE---PEHTPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGERNKLLAMEDVLHE 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL K L+ +F++E++
Sbjct: 567 RVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELTKALANFLFDSEDA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E IK AVM V +F
Sbjct: 687 ILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPYEDIKTAVMTSVTGHF 746
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S A+ + ++G+D
Sbjct: 747 RPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVSDEAMNHLVSVGYD 806
Query: 668 LIYGAR 673
++GAR
Sbjct: 807 PVFGAR 812
>gi|400405050|ref|YP_006587909.1| ATP-dependent chaperone ClpB [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400363413|gb|AFP84481.1| ATP-dependent chaperone ClpB [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 857
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/703 (57%), Positives = 537/703 (76%), Gaps = 15/703 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKK+T+DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKFTVDLTARAAQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L ++L LD+ L+AG KYRGEFE+RLK +L ++ + ++ +FIDEL
Sbjct: 221 QRIVNGEVPEGLKKNRVLSLDMGSLVAGAKYRGEFEERLKSVLNDLLKEEGNVTLFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTMIG G EG+IDA NMLKP L+RGELHCIGATTL+EYR++IEKDAA ERRFQK+ V E
Sbjct: 281 HTMIGAGNAEGTIDACNMLKPALARGELHCIGATTLDEYRKFIEKDAALERRFQKVFVVE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P++E TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PNVENTIAILRGLKERYELHHNVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+I+IDSKPE +D+LERR++QLK+E +A+K+E DE+S KRL L+ E+ K E Y+ LE+
Sbjct: 401 IRIQIDSKPEELDRLERRIMQLKLEQQALKKESDEASIKRLALLHDELAKKESDYSALEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q +K +E+ ++ I +A R D +S+L+YG + +LE+ L+ +
Sbjct: 461 KWKAEKASLSGTQYLKATLEQAKISIEQARRACDLARMSELQYGTIPELEKKLEAAAT-- 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
F LL+ +V EIAE+V+R TGIPVS++++ EREKLL +E L + V+GQ
Sbjct: 519 ----FKEEGFCLLRNRVTDIEIAEVVARWTGIPVSRMLESEREKLLRMEQDLHQWVIGQH 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSFMFLGPTGVGKTELCK L+ +F++ ++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLADPNRPIGSFMFLGPTGVGKTELCKALTTFLFDSYDAMLRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTETVRRRPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD++GRT++FRNT+++MTSNLGS+ I+E + + +K V++ V +FRPEF+
Sbjct: 695 DDGRLTDSQGRTVDFRNTVVIMTSNLGSELIQERFGQMSYQEMKRIVLDVVSHHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+I+VF L+R++I I IQL L +L + IS+ L + GFD +YGA
Sbjct: 755 NRVDEIVVFHPLSREDISDIVQIQLQRLYQRLEERGYKTTISEEVLALLEQSGFDPVYGA 814
Query: 673 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTL 715
R + K+++ + ++P + I G L+ P L L
Sbjct: 815 RPL---KRTIQQAI-----ENPLSQQILSGQLLPGKPVHLQVL 849
>gi|336314900|ref|ZP_08569814.1| ATP-dependent chaperone ClpB [Rheinheimera sp. A13L]
gi|335880727|gb|EGM78612.1| ATP-dependent chaperone ClpB [Rheinheimera sp. A13L]
Length = 861
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/667 (59%), Positives = 531/667 (79%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALTKYTVDLTARAEAGKLDPVIGRDEEIRRCIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLA RIIN EVP L K++L LD+ LLAG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLALRIINKEVPEGLKDKRVLSLDMGSLLAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHRYVSDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR+IQLK+E A+ +E DE++KKR +I+++I +L++K
Sbjct: 395 DEAASSIRMQMDSKPEELDRLERRIIQLKLEDNALAKETDEATKKRRDMIQEQIRELDLK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y L+++W EK ++ +Q IK ++E+ RL + A R D +S+LKY + LE+ L
Sbjct: 455 YNELDEVWSSEKAALQGTQNIKADLEQARLDMEVARRAGDLNRMSQLKYERIPALEKRLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++ ++ TLL+ KV +EIA+++S+ TGIPVSK+++ ER+KLL +E L K
Sbjct: 515 LASQVEM------HEMTLLRNKVTEQEIADVLSKATGIPVSKMLEGERDKLLRMEQELQK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ AVSN+IRRSR+GL+D +P GSF+FLGPTGVGKTEL K L+ +F+ E++
Sbjct: 569 RVVGQAEALEAVSNSIRRSRAGLADPNKPIGSFLFLGPTGVGKTELTKALAQFLFDTEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 LIRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D + +K +M +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDLIQEHYQHQDYQQMKDMLMEVLSKQ 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D+ +VF L+ +I IA+IQL L+ +L L ++ AAL ++ GF
Sbjct: 749 FRPEFLNRLDETVVFHPLDSAHIRHIASIQLQRLRLRLQDKGFALSVTDAALDLLAAAGF 808
Query: 667 DLIYGAR 673
D ++GAR
Sbjct: 809 DAVFGAR 815
>gi|226881149|gb|ACO90024.1| ClpB [Psychromonas arctica]
Length = 858
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/661 (59%), Positives = 525/661 (79%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+A GKLDPVIGRDDE+RR +QVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTERAAAGKLDPVIGRDDEVRRIVQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGKRVLSLDMGSLIAGAKYRGEFEERLKAVLAELNKEEGQVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DA NMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK++V+E
Sbjct: 281 HTMVGAGKGDGAMDASNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVIVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHKVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKL R++IQL +E ++++ DE+S KRL +++ + +Y L++
Sbjct: 401 IRLQIDSKPESLDKLGRKIIQLTVEQKSLQNSSDEASIKRLNDLEQTLKSKGTEYKELDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + +Q IK+ +E+ RL + A+R SD +S+L+YG + LE+ L SQ +
Sbjct: 461 IWKTEKAALSGTQNIKQALEQARLDLEVASRASDLTRMSELQYGRIPDLEKQLDLASQVE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLLK V EIA+I++ TGIPVSK+++ ER+KLL +E L +VVGQ+
Sbjct: 521 MQ------EMTLLKHSVTENEIADILAHWTGIPVSKMLEGERDKLLKMEKYLHSQVVGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTE CK L+ +F++ ++++RIDM
Sbjct: 575 EAIEAVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTESCKALANFLFDSVDNMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+I+MTSN+GS+ I+E + + +K ++ + F+PEF+
Sbjct: 695 DDGRLTDGKGRTVDFRNTVIIMTSNIGSEIIQEAFPRASYDDVKNTLLGILAKQFKPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L+ K+I SIA IQL+ L+ +L + L + A+++ + G+D +YGA
Sbjct: 755 NRIDETVVFHPLSEKHIKSIATIQLHALQARLKERGYLLTFNDASIELLVEAGYDPMYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>gi|403053914|ref|ZP_10908398.1| clpB [Acinetobacter bereziniae LMG 1003]
gi|445412446|ref|ZP_21433190.1| ATP-dependent chaperone protein ClpB [Acinetobacter sp. WC-743]
gi|444767082|gb|ELW91335.1| ATP-dependent chaperone protein ClpB [Acinetobacter sp. WC-743]
Length = 859
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/668 (59%), Positives = 530/668 (79%), Gaps = 8/668 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ L KYTIDLT +A GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLNKYTIDLTARAAEGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ LLAG KYRGEFE+RLK +LK+++ +II
Sbjct: 212 IVEGLAQRIINGEVPEGLKGKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKFDGEII 271
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQFIEKDAALERRFQ 331
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+ KY HHGV+I D AI+AA+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKDKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLI 391
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++IK+EIDSKPE +D+L+RRLIQLK++ EA+K++ D SK + ++K+I +++ +
Sbjct: 392 DEAASRIKMEIDSKPEALDRLDRRLIQLKMQLEAVKKDADSVSKAEVEHLEKQIAEVQKE 451
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE-RIL 366
Y++LE++W EK L+ + Q + E++K R KA R+ D S+L+YG + +L+ R+
Sbjct: 452 YSDLEEVWIAEKRLVDGTNQAQIELDKARTAFEKAQREGDLAEASRLQYGVIPELQKRLN 511
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+E+ + + P L++TKV EIAE+VS TGIPVSK++Q EREKLL++E+ L
Sbjct: 512 EEEVAEVNEEPK------LIRTKVTENEIAEVVSAATGIPVSKMLQGEREKLLHMEDFLH 565
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
RVVGQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L +F++++
Sbjct: 566 NRVVGQDEAVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALGNFLFDSDD 625
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+IIRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVF
Sbjct: 626 AIIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVF 685
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKI 605
NILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G E ++ VMN V
Sbjct: 686 NILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSSDVRELGEGASDEDVRATVMNAVSQ 745
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID+++VF L + I IA+IQL+ L+ +L + ++ L + A + + G
Sbjct: 746 HFRPEFINRIDELVVFHSLKKSQIRGIADIQLDRLRARLAERDIRLNVDDQAFDILIDAG 805
Query: 666 FDLIYGAR 673
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|417729516|ref|ZP_12378211.1| chaperone protein clpB [Shigella flexneri K-671]
gi|419192641|ref|ZP_13736093.1| chaperone protein ClpB [Escherichia coli DEC7E]
gi|332754018|gb|EGJ84390.1| chaperone protein clpB [Shigella flexneri K-671]
gi|378037994|gb|EHW00516.1| chaperone protein ClpB [Escherichia coli DEC7E]
Length = 678
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/642 (60%), Positives = 517/642 (80%), Gaps = 7/642 (1%)
Query: 33 VIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILL 92
+IGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP L +++L
Sbjct: 1 MIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 60
Query: 93 LDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNML 152
LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDELHTM+G GK +G++DAGNML
Sbjct: 61 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 120
Query: 153 KPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEV 212
KP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+
Sbjct: 121 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 180
Query: 213 HHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRL 272
HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+
Sbjct: 181 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 240
Query: 273 IQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEI 332
IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+ WK EK + +Q IK E+
Sbjct: 241 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 300
Query: 333 EKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGS 392
E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q + LL+ KV
Sbjct: 301 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTD 354
Query: 393 EEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSD 452
EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D
Sbjct: 355 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 414
Query: 453 AKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGY 512
RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY
Sbjct: 415 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 474
Query: 513 IGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTI 572
+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+
Sbjct: 475 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 534
Query: 573 IVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILS 631
++MTSNLGSD I+E + D +K V+ V FRPEFINRID+++VF L ++I S
Sbjct: 535 VIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 594
Query: 632 IANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
IA IQL L +L + ++ IS ALK +S G+D +YGAR
Sbjct: 595 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 636
>gi|148244858|ref|YP_001219552.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Vesicomyosocius okutanii HA]
gi|146326685|dbj|BAF61828.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Vesicomyosocius okutanii HA]
Length = 852
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/662 (60%), Positives = 525/662 (79%), Gaps = 13/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT DLT+ A GKLDPVIGRD EIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LNKYTQDLTQLAIDGKLDPVIGRDSEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EV + K++L LD+ L+AG KYRGEFE+RLK +LKE+ + Q II+FIDEL
Sbjct: 221 QRIINHEVSEGIKGKRVLSLDMTALIAGAKYRGEFEERLKVVLKELEDKQGQIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +GS+DAGN+LKP L+RG+LHCIGATTLNEYRQYIEKD+A ERRFQK+LV+E
Sbjct: 281 HTMVGIGKSDGSMDAGNILKPALARGDLHCIGATTLNEYRQYIEKDSALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P ++TI+ILRGL++KYEVHHGVEITDPAI+ A S RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PTEQDTIAILRGLKEKYEVHHGVEITDPAIIVAVTYSTRYITDRQLPDKAIDLIDEAASQ 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MDKL+R+L+QLKIE A+K+E D++SK RL + K I LE +YANLEK
Sbjct: 401 IRMEIDSKPESMDKLDRKLVQLKIERMALKKEKDKASKTRLEELVKLIKSLEKEYANLEK 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK +++ + +KEE+E+ + + A R ++ +S+L+YG I+ E QK
Sbjct: 461 IWKKEKLVVQSAHHLKEELEQAKSDLENAHRNNNLAKMSELQYG-------IIPELEQK- 512
Query: 374 IQLPNNAN--KFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 431
I + NA+ + TLL+ KV EIA IV+R TGIPV K++ E++KLL +E ++ KR+VG
Sbjct: 513 INMAENADTEQMTLLRNKVTENEIAHIVARWTGIPVDKMMAGEKDKLLQMETIIHKRLVG 572
Query: 432 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 491
QD+A+ +S+A+RR+RSGLSD RP GSF+F+GPTGVGKTEL K L+ +F+ E++I+RI
Sbjct: 573 QDKAVKVISDAVRRARSGLSDPNRPDGSFLFMGPTGVGKTELTKALADFLFDTEQAIVRI 632
Query: 492 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 551
DMSEF+EKHS++RLIGAPPGY+GYE+GG LTE VRRKPYS+ILLDEIEKA+SD+FNILLQ
Sbjct: 633 DMSEFMEKHSVARLIGAPPGYVGYEQGGVLTEAVRRKPYSIILLDEIEKAHSDLFNILLQ 692
Query: 552 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 611
+LDDGRLTD++GRT++F+NTII+MTSNLGS I++ D + +++E +FRPEF
Sbjct: 693 VLDDGRLTDSQGRTVDFKNTIIIMTSNLGSHLIQQNPGKDMSVELTKIVSE---HFRPEF 749
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NRID+I+ F+ L + I IA Q+ IL ++L K+N+ + +S A+ I N G++ ++G
Sbjct: 750 VNRIDEIVTFKTLEKSQIKGIALRQIEILSSRLSKLNLRITLSDIAISMIVNKGYNPVFG 809
Query: 672 AR 673
AR
Sbjct: 810 AR 811
>gi|90408475|ref|ZP_01216634.1| putative clpB, ATPase with chaperone activity [Psychromonas sp.
CNPT3]
gi|90310407|gb|EAS38533.1| putative clpB, ATPase with chaperone activity [Psychromonas sp.
CNPT3]
Length = 854
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/661 (59%), Positives = 529/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L K+TIDLTE+A LGKLDPVIGRDDE+RR IQVLQRR+KNNPV+IGEPGVGKTA+VEGLA
Sbjct: 158 LAKFTIDLTERAELGKLDPVIGRDDEVRRMIQVLQRRTKNNPVIIGEPGVGKTALVEGLA 217
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP+ L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 218 QRIVNGEVPDGLKNKRVLSLDMGALIAGAKYRGEFEERLKDVLNELAKKEGQVILFIDEL 277
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKI V+E
Sbjct: 278 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIQVDE 337
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P+++++I+ILRGL+++YE+HH VEITDPAIVAA LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 338 PNVQDSIAILRGLKERYELHHKVEITDPAIVAAVTLSHRYIADRRLPDKAIDLIDEAASS 397
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++++DSKPE +DKL R++IQL +E ++++ + D +S +RL ++K + + +Y L++
Sbjct: 398 IRLQLDSKPECLDKLGRKIIQLTVEQKSLQDDTDPASIERLKDLEKSLRQKGKEYKVLDE 457
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK+E+E+ RL + ATR SD +S+L+YG++ LE+ L +Q +
Sbjct: 458 VWKTEKAALSGTQNIKKELEQRRLDLEVATRASDLSRMSELQYGKIPALEKQLDLATQAE 517
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ TLLK V EIAEI++ TGIPV K++Q EREKLL +E L RVVGQ+
Sbjct: 518 M------TDMTLLKHCVTEHEIAEILAHWTGIPVDKMLQGEREKLLKMEKHLHTRVVGQN 571
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI+A++NAIRRSR+GLSD +P GSF+FLGPTGVGKTE CK L+ +F++E++++RIDM
Sbjct: 572 EAINAIANAIRRSRAGLSDPDKPIGSFLFLGPTGVGKTESCKALAHFLFDSEDNMVRIDM 631
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 632 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 691
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRN +I+MTSN+GSD I++ ++ + IK ++ ++ F+PEF+
Sbjct: 692 DDGRLTDGQGRTVDFRNAVIIMTSNIGSDIIQDSFDESSYKDIKQRLLGVLREKFKPEFL 751
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+ +VF L R+++ SIA IQL+ L+ +L + L S+ ++ + GFD +YGA
Sbjct: 752 NRIDETVVFHPLGRQHLKSIAIIQLHKLQARLKARHYFLTFSEGSVDFMVEAGFDPVYGA 811
Query: 673 R 673
R
Sbjct: 812 R 812
>gi|440730877|ref|ZP_20910938.1| ATP-dependent clp protease subunit protein [Xanthomonas translucens
DAR61454]
gi|440376400|gb|ELQ13074.1| ATP-dependent clp protease subunit protein [Xanthomonas translucens
DAR61454]
Length = 897
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/664 (57%), Positives = 526/664 (79%), Gaps = 10/664 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L ++T +LT++AR ++DPVIGRD EIR+ I +L RR +NNP+L GE GVGKTA+VEGLA
Sbjct: 197 LDQFTTNLTQRARDAQIDPVIGRDGEIRQVIDILMRRRQNNPILTGEAGVGKTAVVEGLA 256
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
+RI +VP+ L ++ +LD+ LL AG +GEFE+RLK ++ E+ + II+FIDE
Sbjct: 257 RRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENRLKNVIDEVKKSPHPIILFIDEA 316
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTMIG G G DA N+LKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+ V E
Sbjct: 317 HTMIGAGGTAGQNDAANLLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGE 376
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+DEAA++
Sbjct: 377 PTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIADRQLPDKAIDLMDEAASR 436
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KL+ ++++L++
Sbjct: 437 IRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLQREFSDLDE 496
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W+ EK ++ + +IKE+IE+ R+++ A R+ D+ +S+++YG L LE+ L +
Sbjct: 497 VWRSEKATLQGATRIKEQIEQARVELEAAQRRQDYAKMSEIQYGLLPNLEKQLAAAGDAE 556
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ FTL++ +V +EEIAE+VSR TGIPV+++++ ER+KLL +E+ L +RVVGQ
Sbjct: 557 ------HHDFTLVQDRVTAEEIAEVVSRWTGIPVNRMLEGERDKLLRMEDELHRRVVGQQ 610
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++ E++IRIDM
Sbjct: 611 EAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSEAMIRIDM 670
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+SDVFNILLQ+L
Sbjct: 671 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFNILLQVL 730
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI---IKLAVMNEVKIYFRP 609
DDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E +K AVM V+ +FRP
Sbjct: 731 DDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRP 790
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EF+NR+DDI+VF L++ I SIA IQL L +L + + +++S AL+ + N+GFD +
Sbjct: 791 EFVNRLDDIVVFHPLDKAQIKSIARIQLGGLDKRLAERGLKIELSDRALELLGNVGFDPV 850
Query: 670 YGAR 673
YGAR
Sbjct: 851 YGAR 854
>gi|392377944|ref|YP_004985103.1| chaperone [Azospirillum brasilense Sp245]
gi|356879425|emb|CCD00337.1| chaperone [Azospirillum brasilense Sp245]
Length = 874
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/667 (58%), Positives = 523/667 (78%), Gaps = 9/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE LKKYT DLT AR GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 157 EEGYDALKKYTRDLTAVARDGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTA 216
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+ G+VP SL KK+L LD+ LLAG KYRGEFE+RLK +L E+++ ++ +I
Sbjct: 217 IVEGLAQRIVKGDVPESLKDKKLLALDLGSLLAGAKYRGEFEERLKAVLSEVTSGREGVI 276
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHT++G G EG++DA NMLKP L+RGELHC+GATTL EYR++IEKDAA RRFQ
Sbjct: 277 LFIDELHTLVGAGGAEGAMDASNMLKPALARGELHCVGATTLEEYRKHIEKDAALARRFQ 336
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
+LV EP +E+TISILRG+++KYEVHHGV ITD AIVAA+ LS+RYI+DRF+PDKAIDL+
Sbjct: 337 PVLVGEPTVEDTISILRGIKEKYEVHHGVRITDSAIVAAATLSHRYITDRFLPDKAIDLM 396
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++ +DSKPE +D+L+RR++Q+KIE EA+K+E D +S++RL ++KE+++LE K
Sbjct: 397 DEAASRLRMAVDSKPEEIDELDRRIVQMKIEREALKKESDPASRERLQRLEKELSELEQK 456
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A L W+ EK + ++ +KE +++ R+++ +A R+ DW +L YG L LER LK
Sbjct: 457 SAELTATWRAEKEKLAGARTLKERLDQARIELEQAQRRGDWTRAGELAYGILPDLERQLK 516
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E + Q +L+ V +E IA +VSR TGIPV K+++ EREKLL++E L +
Sbjct: 517 EAEAQGDQ--------RMLEEAVTAEHIAAVVSRWTGIPVDKMLEGEREKLLHMEGALRQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEAI AVSNA+RR+R+GL D RP GSF+FLGPTGVGKTEL K L+ +F++E +
Sbjct: 569 RVIGQDEAIVAVSNAVRRARAGLQDPNRPMGSFLFLGPTGVGKTELTKALAEFLFDDEHA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGG LTE VRR+PY +IL DE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGSLTEAVRRRPYQVILFDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ + + E D + ++ VM V+
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLATLGEDQDVDTVRAEVMEAVRAA 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D+I++FR L+R+++ I +IQ L+ L + L++ AA + +++ G+
Sbjct: 749 FRPEFLNRLDEILIFRRLSREDMSGIVDIQFRRLQRLLDDRKLVLEVDDAAKRWLADAGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>gi|374313940|ref|YP_005060369.1| protease of ClpA/ClpB type [Serratia symbiotica str. 'Cinara
cedri']
gi|363988166|gb|AEW44357.1| protease of ClpA/ClpB type [Serratia symbiotica str. 'Cinara
cedri']
Length = 858
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/668 (59%), Positives = 529/668 (79%), Gaps = 9/668 (1%)
Query: 7 DEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKT 66
D++ I LKKYTIDLTE A GKLDPVIGRD+EIRR IQVLQRRSKNNPVL+GEPGVGKT
Sbjct: 156 DQQQI--LKKYTIDLTELAEQGKLDPVIGRDEEIRRTIQVLQRRSKNNPVLLGEPGVGKT 213
Query: 67 AIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDI 126
AIVEG+AQRI+NGEVP + K++LLLD+ L+AG KYRG+FE+RLK +L +S + ++
Sbjct: 214 AIVEGMAQRIVNGEVPEGIKHKRVLLLDMTSLIAGAKYRGDFEERLKAVLNNLSKQEGNV 273
Query: 127 IIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRF 186
I+FIDELH M+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRF
Sbjct: 274 ILFIDELHIMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333
Query: 187 QKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDL 246
QK+ + EP IE+TI+ILRGL+++YE+HH V+ITD +IVAA+ LS+RYISDR +PDKAIDL
Sbjct: 334 QKVYISEPSIEDTIAILRGLKERYELHHHVQITDLSIVAAATLSHRYISDRQLPDKAIDL 393
Query: 247 IDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEI 306
IDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+ +E D SSKK L ++ E+ + E
Sbjct: 394 IDEAASSIRMQIDSKPEPLDRLERRIIQLKLEQQALNKESDASSKKCLDILNNELEQKER 453
Query: 307 KYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERIL 366
+Y+ LE+ WK EK + +Q IK +E+ ++ + +A R SD +S+L+YG L LE+ L
Sbjct: 454 EYSELEEEWKSEKASLSGAQNIKAALEQAKINLEQARRVSDLGKMSELQYGTLPALEKQL 513
Query: 367 KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLC 426
+Q ++ N LL+ +V E+AEI++R+TGIPV++I++ ER+KLL +E L
Sbjct: 514 AIMTQ------SSGNTMKLLRNRVTDIEVAEILARSTGIPVARILEGERDKLLRLEQALH 567
Query: 427 KRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEE 486
RV+GQ+EA+SA+SNAIRR+R GLSD RP GSF+FLG TG+GKTELCK L++ +F +
Sbjct: 568 SRVIGQNEAVSAISNAIRRNRVGLSDPNRPIGSFLFLGSTGIGKTELCKALASFLFECDR 627
Query: 487 SIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVF 546
+++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE+VRR+PYS+ILLDEIEKA+ DVF
Sbjct: 628 AMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEVVRRRPYSVILLDEIEKAHKDVF 687
Query: 547 NILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKI 605
NILLQ+LDD RLTD +GRT++FRNT+++MTSNLGS+ +E K E I+ +VM +
Sbjct: 688 NILLQVLDDARLTDGQGRTVDFRNTVVIMTSNLGSNLFQEHYKQIGHEHIQDSVMEMLSH 747
Query: 606 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 665
+FRPEFINRID++++F L++K+I IA IQL L +L + + I+ AL+ + IG
Sbjct: 748 HFRPEFINRIDEVVLFHPLSQKHIFDIAKIQLACLYKRLEERGYKVVITTPALEWLVKIG 807
Query: 666 FDLIYGAR 673
F +YGAR
Sbjct: 808 FSSMYGAR 815
>gi|118602768|ref|YP_903983.1| ATPase [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|118567707|gb|ABL02512.1| ATPase AAA-2 domain protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 859
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/660 (60%), Positives = 519/660 (78%), Gaps = 9/660 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT DLT+ A KLDPVIGRD EIRRAIQVLQRR+KNNPVLIG+PGVGKTAIVEGLA
Sbjct: 168 LKKYTQDLTQLAIDSKLDPVIGRDSEIRRAIQVLQRRTKNNPVLIGKPGVGKTAIVEGLA 227
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP + K++L LD+A L+AG KYRGEFE+RLK +LKE+ Q +I+FIDEL
Sbjct: 228 QRIINNEVPEGIKGKRVLSLDMAALVAGAKYRGEFEERLKAVLKELEAEQGQVILFIDEL 287
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G+ K +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKD+A ERRFQK+LV+E
Sbjct: 288 HTVVGSSKSDGAMDAGNMLKPALARGDLHCMGATTLDEYRQYIEKDSALERRFQKVLVDE 347
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
++TI+ILRGL++KYEVHHGVEITDPAI+AA S RYI+DR +PDKAIDLIDEAA++
Sbjct: 348 STEQDTIAILRGLKEKYEVHHGVEITDPAIIAAVTYSTRYITDRQLPDKAIDLIDEAASQ 407
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE MDKL+R+L+QLKIE A+K+E D++SK RL + I LE +Y +LE+
Sbjct: 408 IRMEIDSKPESMDKLDRKLVQLKIERMALKKEKDKASKVRLKELVALIQSLEKEYTDLEE 467
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK +++D+ +KEE+E+ + A R +D +S+L+YG + +LE+ + D
Sbjct: 468 IWKKEKLVVQDAHHLKEELEQAKANFENAHRNNDLAKMSELQYGIIPELEKKIGTTENAD 527
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q + TLL+ KV +EIA IV+R TGIP+ K++ E++KLL +E ++ KR+VGQD
Sbjct: 528 TQ------QMTLLRNKVTEDEIAHIVARWTGIPMDKMIAGEKDKLLKMEAIIHKRLVGQD 581
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
+A+ +SNAIRR+RSGLSD RP GSF+F+GPTGVGKTEL K L+ +F+ E++I+R+DM
Sbjct: 582 KAVKVISNAIRRARSGLSDPNRPDGSFLFMGPTGVGKTELTKALADFLFDTEQAIVRVDM 641
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYE+GG LTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 642 SEFMEKHSVARLIGAPPGYVGYEQGGMLTEAVRRKPYSIILLDEIEKAHLDVFNILLQVL 701
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRTI+F+NT+I+MTSNLGS I++ D ++NE +FRPEF+N
Sbjct: 702 DDGRLTDGQGRTIDFKNTVIIMTSNLGSYLIQQNPGKDMSAELSKIVNE---HFRPEFVN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+II F+ L + I IA Q+ IL +L K+N+ L +S A+ I + G+D ++GAR
Sbjct: 759 RIDEIITFKMLEKYQIKDIALKQIEILSVRLAKLNLKLTLSNTAINMIVDRGYDPVFGAR 818
>gi|365922414|ref|ZP_09446626.1| ATP-dependent chaperone protein ClpB [Cardiobacterium valvarum
F0432]
gi|364573633|gb|EHM51121.1| ATP-dependent chaperone protein ClpB [Cardiobacterium valvarum
F0432]
Length = 754
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/595 (63%), Positives = 499/595 (83%), Gaps = 6/595 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTID+T +A GK+DPVIGRD+EIRRA+Q+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LKKYTIDVTARAEQGKIDPVIGRDEEIRRAMQILQRRNKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL K++L LD+A L+AG+KYRG+FE+RLK +L +I II+FIDE+
Sbjct: 219 QRIVNGEVPESLKGKRLLSLDLAALMAGSKYRGDFEERLKAVLSDIEKANGQIILFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYRQY+EKDAA ERRFQK++VEE
Sbjct: 279 HTMVGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEYRQYMEKDAALERRFQKVMVEE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ++YEVHHG++ITDPA+VAA+ LS RYI++R +PDKAIDLIDEAAA+
Sbjct: 339 PSVEDTIAILRGLQERYEVHHGIDITDPALVAAAVLSNRYITNRQLPDKAIDLIDEAAAQ 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKPE MD+++RRLIQLK+E A+++E+D++SKKRL ++ +I KLE +YA+L +
Sbjct: 399 IRMELDSKPEAMDRIDRRLIQLKMERLALEKEHDDASKKRLADLEDDIQKLEKEYADLNE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW+ EK + S IKEEI+++R+++ A R+ D T+S+++YG++ LE+ L + D
Sbjct: 459 IWQAEKASNQGSAGIKEEIDRLRIELEVAKRRGDLATMSEIQYGKIPALEKQLTAANAAD 518
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ L+++KV EEIA+IVSR TGIPV+K+++ E+EKLL +E+ L RVVGQ
Sbjct: 519 ------STPHQLMRSKVTEEEIAQIVSRWTGIPVAKMLESEKEKLLALESALSARVVGQQ 572
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
A+ AV+NAIRR+R+GLSD RP GSF+FLGPTGVGKTELC+TL+A +F+++E+I+R+DM
Sbjct: 573 TAVEAVANAIRRNRAGLSDPNRPIGSFLFLGPTGVGKTELCRTLAAFLFDSDEAIVRLDM 632
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS++RLIGAPPGY+GY++GGYLTE VRR+PYS++L DEIEKA+ DVFN+LLQ+L
Sbjct: 633 SEYMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRRPYSVVLFDEIEKAHPDVFNVLLQVL 692
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFR 608
DDGRLTD +GRT++FRNT+I+MTSNLGS I+E D E +K+ VM V +FR
Sbjct: 693 DDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQEAPNDDYEAMKIKVMEVVAAHFR 747
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,961,906,442
Number of Sequences: 23463169
Number of extensions: 597668371
Number of successful extensions: 2520123
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14526
Number of HSP's successfully gapped in prelim test: 13569
Number of HSP's that attempted gapping in prelim test: 2430061
Number of HSP's gapped (non-prelim): 61280
length of query: 938
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 786
effective length of database: 8,792,793,679
effective search space: 6911135831694
effective search space used: 6911135831694
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)