BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14500
(938 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q82SD8|CLPB_NITEU Chaperone protein ClpB OS=Nitrosomonas europaea (strain ATCC 19718
/ NBRC 14298) GN=clpB PE=3 SV=1
Length = 863
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/660 (67%), Positives = 562/660 (85%), Gaps = 1/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARSGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +LKE++ ++ I+FIDEL
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLKELAQDEGRTIVFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PGVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E DSKPE+MDKL+RRLIQLKIE EA+++E D++SKKRL L+++EI+KLE +YA+L++
Sbjct: 401 IRMEQDSKPEVMDKLDRRLIQLKIEREAVRKEKDDASKKRLALLEEEISKLEREYADLDE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
I K EK+ K SQ+IKEE++K+R + A RK D Q S+L YG + +LE L E+
Sbjct: 461 ILKAEKSRAKGSQEIKEELDKLRREEEAARRKGDLQRASELLYGRIPQLEAQLAEQLHH- 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ A + L +T+VG+EEIAE+VSR TGIPVSK++Q EREKLL +E+ L +RV+GQD
Sbjct: 520 AESAEEAVQPKLFRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLFMEDKLHERVIGQD 579
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSRSGL+D RPYGSF+FLGPTGVGKTELCK L+ +F++EE +IR+DM
Sbjct: 580 EAVRLVSDAIRRSRSGLADPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRVDM 639
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 640 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVL 699
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKLAVM EVK YFRPEFIN
Sbjct: 700 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKLAVMGEVKTYFRPEFIN 759
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L +I SIA IQL+ L +L +M M L +S+ AL K++ +GFD ++GAR
Sbjct: 760 RIDEVVVFHALGEAHIKSIARIQLSNLGKRLAQMEMKLVVSEPALTKLAEVGFDPVFGAR 819
>sp|Q7NWN7|CLPB_CHRVO Chaperone protein ClpB OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=clpB PE=3 SV=1
Length = 859
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/660 (67%), Positives = 566/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTMDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L ++S + +IFIDE+
Sbjct: 221 QRIVNGEVPESLKNKRLLVLDLAALIAGAKYRGEFEERLKAVLNDLSKDDGQTLIFIDEI 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 281 HTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSQRYITDRFLPDKAIDLIDEAASR 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+E+DSKPE MDKL+RRLIQLKIE EA+ +E DE+S+KRL LI+ EI +L +YA+LE+
Sbjct: 401 IKMELDSKPEAMDKLDRRLIQLKIEREAVNKESDEASQKRLKLIEDEIAELSREYADLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + SQ IKEEI+++++ + + RK DWQ +++L+YG+L +LE LKE
Sbjct: 461 IWKAEKAAQQGSQSIKEEIDRLKVDMEELKRKGDWQKLAELQYGKLPQLEARLKEAESAG 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ N+ LL+T+VG+EEIAE+VSR TGIPVSK++ EREKLL +E++L +RVVGQD
Sbjct: 521 DKGEAKPNR--LLRTQVGAEEIAEVVSRATGIPVSKMLTGEREKLLKMEDVLHQRVVGQD 578
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL++ +F++++ +IRIDM
Sbjct: 579 EAVSAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTLASFLFDSKDHLIRIDM 638
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 639 SEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVL 698
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSN+GS +I+ M D ++IKLAVM EVK FRPEFIN
Sbjct: 699 DDGRLTDGQGRTVDFKNTVIVMTSNIGSQQIQAMATDDYQVIKLAVMAEVKTQFRPEFIN 758
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L+ K+I SIA IQL L+N+L K+ + L+IS AL +S GFD +YGAR
Sbjct: 759 RIDEVVVFHGLDEKHIQSIARIQLKSLENRLAKLELSLQISDEALALLSEAGFDPVYGAR 818
>sp|Q8XZR0|CLPB_RALSO Chaperone protein ClpB OS=Ralstonia solanacearum (strain GMI1000)
GN=clpB PE=3 SV=1
Length = 862
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/660 (67%), Positives = 561/660 (85%), Gaps = 2/660 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L +I+ + I+FIDE+
Sbjct: 220 QRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEI 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 340 PSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI++EI +L+ +YA+LE+
Sbjct: 400 IKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK + + +KEEI++V+L+I + R+ V++L+YG L +LE LK + +
Sbjct: 460 IWKAEKGAAQGAAAVKEEIDRVKLEIARLQREGKLDKVAELQYGRLPELEGKLKAATAAE 519
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL +E+ L +RVVGQD
Sbjct: 520 ASGQRPPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLRMEDRLHERVVGQD 577
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 578 EAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 637
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 638 SEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL 697
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK AV EVK +FRPEF+N
Sbjct: 698 DDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMASESPDVIKGAVWQEVKTHFRPEFLN 757
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+++VF L++ +I SIA IQL L +L M++ L+IS A+ K+++ G+D ++GAR
Sbjct: 758 RIDEVVVFHALDQGHIESIARIQLQRLAARLAHMDLTLEISDPAVAKLASAGYDPVFGAR 817
>sp|Q9JTP9|CLPB_NEIMA Chaperone protein ClpB OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=clpB PE=3 SV=1
Length = 859
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>sp|Q9JYQ8|CLPB_NEIMB Chaperone protein ClpB OS=Neisseria meningitidis serogroup B
(strain MC58) GN=clpB PE=3 SV=1
Length = 859
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/666 (64%), Positives = 554/666 (83%), Gaps = 2/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L +++ + + +
Sbjct: 215 IVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTL 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 IFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DRF+PDKAIDLI
Sbjct: 335 KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL LI +EIN L+ +
Sbjct: 395 DEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL Y +L LE+
Sbjct: 455 YADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER+KLL +E +L +
Sbjct: 515 AAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHR 572
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK L+ +F++E+
Sbjct: 573 RVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDH 632
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
+IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 633 LIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFN 692
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +K VM +VK +F
Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHF 752
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S AAL I+ GFD
Sbjct: 753 RPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFD 812
Query: 668 LIYGAR 673
IYGAR
Sbjct: 813 PIYGAR 818
>sp|Q7W9E6|CLPB_BORPA Chaperone protein ClpB OS=Bordetella parapertussis (strain 12822 /
ATCC BAA-587 / NCTC 13253) GN=clpB PE=3 SV=1
Length = 865
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/661 (65%), Positives = 552/661 (83%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE++ + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I++E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG+L +LE LK +
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAADSAE 519
Query: 374 IQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L KRVVGQ
Sbjct: 520 REAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +IRID
Sbjct: 580 DEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK V +E+K FRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIKEVVWDELKHTFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L K M L +S AAL +I+ GFD ++GA
Sbjct: 760 NRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>sp|Q7WHB6|CLPB_BORBR Chaperone protein ClpB OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=clpB PE=3 SV=1
Length = 865
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/661 (65%), Positives = 552/661 (83%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE++ + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I++E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG+L +LE LK +
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAADSAE 519
Query: 374 IQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L KRVVGQ
Sbjct: 520 REAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +IRID
Sbjct: 580 DEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK V +E+K FRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIKEVVWDELKHTFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L K M L +S AAL +I+ GFD ++GA
Sbjct: 760 NRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>sp|Q7VYV6|CLPB_BORPE Chaperone protein ClpB OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=clpB PE=3 SV=1
Length = 865
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/661 (65%), Positives = 551/661 (83%), Gaps = 1/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LKE++ + I+FIDEL
Sbjct: 220 QRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDEL 279
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV E
Sbjct: 280 HTMAGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGE 339
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
PD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEA A+
Sbjct: 340 PDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGAR 399
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I++E+ KL+ +Y + E+
Sbjct: 400 IRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEE 459
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG+L +LE LK +
Sbjct: 460 IWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYGKLPELEARLKAADSAE 519
Query: 374 IQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 432
+ +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+KLL +E+ L KRVVGQ
Sbjct: 520 REAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQ 579
Query: 433 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 492
DEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L+ +F++EE +IRID
Sbjct: 580 DEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRID 639
Query: 493 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 552
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQV 699
Query: 553 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK V +E+K FRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIKEVVWDELKHTFRPEFL 759
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L K M L +S AAL +I+ GFD ++GA
Sbjct: 760 NRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGA 819
Query: 673 R 673
R
Sbjct: 820 R 820
>sp|Q87AX8|CLPB_XYLFT Chaperone protein ClpB OS=Xylella fastidiosa (strain Temecula1 /
ATCC 700964) GN=clpB PE=3 SV=1
Length = 861
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/717 (59%), Positives = 568/717 (79%), Gaps = 16/717 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L +++ N+ +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL+ ++++I L+ +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLVDLERDIEVLDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG L LE+ L
Sbjct: 455 FSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLV 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+KLL +E L +
Sbjct: 515 AASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDKLLRMEADLGR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII----KLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D + K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMGVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L + AL+ + N
Sbjct: 749 QAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESELKLDLDDRALELLGN 808
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTLRMVYS 720
+GFD +YGAR + K+++ L+ + A GD + G +D ++V+S
Sbjct: 809 VGFDPVYGARPL---KRAIQSQLENALAQQILAGAFVSGDTVQVG---VDGGKLVFS 859
>sp|Q9HVN5|CLPB_PSEAE Chaperone protein ClpB OS=Pseudomonas aeruginosa (strain ATCC 15692
/ PAO1 / 1C / PRS 101 / LMG 12228) GN=clpB PE=3 SV=1
Length = 854
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+ + +I
Sbjct: 215 IVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELGKQEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL ++++I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEEDIVKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++++++Y + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQELHR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDREAQRAAVMDAVNAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ AL K+ +GFD
Sbjct: 748 RPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEALDKLIAVGFD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>sp|Q889C2|CLPB_PSESM Chaperone protein ClpB OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=clpB PE=3 SV=1
Length = 854
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/666 (63%), Positives = 544/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEIVRLEKE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+YG + LER L+
Sbjct: 455 YADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHN 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVSTHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEF+NRID++++F L R I I +IQL L+ +L + + + +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>sp|Q9PGC1|CLPB_XYLFA Chaperone protein ClpB OS=Xylella fastidiosa (strain 9a5c) GN=clpB
PE=3 SV=1
Length = 861
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/717 (59%), Positives = 567/717 (79%), Gaps = 16/717 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L +++ N+ +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL ++++I L+ +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLADLERDIEVLDRE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG L LE+ L
Sbjct: 455 FSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLV 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+KLL +E L +
Sbjct: 515 AASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDKLLRMEADLGR 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVVGQEEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSLILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII----KLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D + K AVM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMEVV 748
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L + AL+ + N
Sbjct: 749 QAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLQGLEKRLAESELKLDLDDRALELLGN 808
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTLRMVYS 720
+GFD +YGAR + K+++ L+ + A GD + G +D ++V++
Sbjct: 809 VGFDPVYGARPL---KRAIQSQLENPLAQQILAEAFVSGDTVQVG---VDGGKLVFA 859
>sp|Q87S63|CLPB_VIBPA Chaperone protein ClpB OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=clpB PE=3 SV=1
Length = 857
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + ++I+FIDEL
Sbjct: 221 QRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + E+N+ E +YA LE+
Sbjct: 401 IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLQALNDELNEKEREYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+W EK + +Q IK E+E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L RVVGQ
Sbjct: 521 MQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHNRVVGQS 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++ VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL++ +F++E++++RIDM
Sbjct: 575 EAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYQGIKSEVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+I+VF L +++I SIA+IQL L +L + L++S AL I+ +GFD +YGA
Sbjct: 755 NRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>sp|Q8P6A0|CLPB_XANCP Chaperone protein ClpB OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=clpB PE=3
SV=1
Length = 861
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/673 (62%), Positives = 547/673 (81%), Gaps = 16/673 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 455 FSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 510
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 511 ----KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
+RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 567 HRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA++DV
Sbjct: 627 EAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-----IKLAVM 600
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ GD +K AVM
Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SGDGSAEAYTQMKAAVM 745
Query: 601 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 660
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AL+
Sbjct: 746 GVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDPALEL 805
Query: 661 ISNIGFDLIYGAR 673
+ N+GFD +YGAR
Sbjct: 806 LGNVGFDPVYGAR 818
>sp|Q9KU18|CLPB_VIBCH Chaperone protein ClpB OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=clpB PE=3 SV=1
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/661 (61%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L KRV+GQ
Sbjct: 521 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 755 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>sp|Q7MNK1|CLPB_VIBVY Chaperone protein ClpB OS=Vibrio vulnificus (strain YJ016) GN=clpB
PE=3 SV=1
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 539/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + +E+N+ E ++A LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSLNEELNEKEREFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 IWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLLK KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIKEQVMEVVTKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L++ +I SIA IQLN L N++ + L++S AL+ I+ +GFD +YGA
Sbjct: 755 NRVDETVVFHPLSQDHIKSIAAIQLNRLANRMEEHGYQLEVSDKALELIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>sp|Q8DEV2|CLPB_VIBVU Chaperone protein ClpB OS=Vibrio vulnificus (strain CMCP6) GN=clpB
PE=3 SV=1
Length = 857
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 538/661 (81%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E+S + +II+FIDEL
Sbjct: 221 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL + +E+N+ E ++A LE+
Sbjct: 401 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSLNEELNEKEREFAELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
IW EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 461 IWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+Q + TLLK KV EIAE++S+ TGIPVSK+++ E+EKLL +E +L KRV+GQ
Sbjct: 521 MQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQK 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL+ +F++E++++RIDM
Sbjct: 575 EAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK VM V +FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIKEQVMEVVTKHFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+ +VF L + +I SIA IQLN L N++ + L++S AL+ I+ +GFD +YGA
Sbjct: 755 NRVDETVVFHPLGQDHIKSIAAIQLNRLANRMEEHGYPLEVSDKALELIAQVGFDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>sp|Q8PHQ4|CLPB_XANAC Chaperone protein ClpB OS=Xanthomonas axonopodis pv. citri (strain
306) GN=clpB PE=3 SV=2
Length = 861
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/672 (61%), Positives = 544/672 (80%), Gaps = 14/672 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L ++S N+ II
Sbjct: 215 IVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+
Sbjct: 335 KVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLM 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL ++ +I+KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLETDIDKLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ +L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG L +LE
Sbjct: 455 FYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLE---- 510
Query: 368 EKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 425
K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+KLL +E+ L
Sbjct: 511 ----KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDEL 566
Query: 426 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 485
RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++
Sbjct: 567 HHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDST 626
Query: 486 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 545
E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+ DV
Sbjct: 627 EAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDV 686
Query: 546 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE----IIKLAVMN 601
FNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +K AVM
Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMG 746
Query: 602 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 661
V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L + AAL+ +
Sbjct: 747 VVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVL 806
Query: 662 SNIGFDLIYGAR 673
++GFD +YGAR
Sbjct: 807 GSVGFDPVYGAR 818
>sp|P44403|CLPB_HAEIN Chaperone protein ClpB OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=clpB PE=3 SV=1
Length = 856
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/666 (61%), Positives = 542/666 (81%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ + E +
Sbjct: 395 DEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG + LE+ L+
Sbjct: 455 YAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPDLEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+ L K
Sbjct: 515 QAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V +F
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHF 748
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +G+D
Sbjct: 749 RPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYD 808
Query: 668 LIYGAR 673
IYGAR
Sbjct: 809 PIYGAR 814
>sp|Q88Q71|CLPB_PSEPK Chaperone protein ClpB OS=Pseudomonas putida (strain KT2440)
GN=clpB PE=3 SV=1
Length = 854
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 545/666 (81%), Gaps = 7/666 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
Q + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>sp|Q6LMY0|CLPB_PHOPR Chaperone protein ClpB OS=Photobacterium profundum GN=clpB PE=3
SV=2
Length = 857
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/667 (61%), Positives = 545/667 (81%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IG+PGVGKTA
Sbjct: 155 EENRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLRHKRVLSLDMGSLIAGAKYRGEFEERLKSVLNELSQEEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 335 KVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAARLSHRYVSDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+ +E D +S+KRL I +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALSKESDAASQKRLNDICEELDVKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG++ +LE+ L
Sbjct: 455 YAELEEVWNAEKAALSGTQHIKSELEQARMNMEVARRAGDLNRMSELQYGKIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q ++Q + +LLK KV EIAE++S+ TGIPV+K+++ ER+KLL +E+ L +
Sbjct: 515 LAAQAEMQ------EMSLLKNKVTDAEIAEVLSKQTGIPVAKMLEGERDKLLRMEDELHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++
Sbjct: 569 RVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDN 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E + E IK V+ V Y
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQENFGNLNYEGIKNMVLEVVSQY 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINR+D+ +VF L ++NI IA+IQ+ L N+L + + +L + ++AL ++ GF
Sbjct: 749 FRPEFINRVDETVVFHPLGQENIKHIASIQIERLVNRLKEKDYELTVQESALDFVAKAGF 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>sp|Q83F55|CLPB_COXBU Chaperone protein ClpB OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=clpB PE=3 SV=1
Length = 859
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/701 (61%), Positives = 566/701 (80%), Gaps = 12/701 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KYTIDLTEKA GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LAKYTIDLTEKAETGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +LK+I+ + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERLKAVLKDIAKEEGRVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P E+ I+ILRGL+++YEVHHGVEITDPAI+AA+ LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQRYITDRNLPDKAIDLIDEAASQ 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I++E+DSKP +D+LERRLIQLKIE EA+K+E DE+SKKRL ++ EI +E +Y++LE+
Sbjct: 401 IRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASKKRLSDLETEIKNVEKEYSDLEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK + +QQIKEE+E+ R+++ A R D +S+L+YG + +L++ LK SQK+
Sbjct: 461 VWKSEKASLHGTQQIKEELEQARIELEAAGRAGDLARMSELQYGIIPELDKKLKAASQKE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q ++ LL+++V EE+AE+VS+ T IPVSK+++ EREKLL++E L KRV+GQD
Sbjct: 521 EQFHDH----KLLRSRVTEEEVAEVVSKWTHIPVSKMLEGEREKLLHMETELHKRVIGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ E++++RIDM
Sbjct: 577 EAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTELCKALAVFLFDTEDAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYS+ILLDEIEKA++DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHNDVFNVLLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 613
DDGRLTD +GRT++FRNT+IVMTSNLGSD I+E + + +K AVM V +FRPEFIN
Sbjct: 697 DDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGENYDKMKDAVMEVVAQHFRPEFIN 756
Query: 614 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 673
RID+ +VF L ++ I +IA IQ++ +K +L + + L IS AL +S +G+D +YGAR
Sbjct: 757 RIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLTISDDALDYLSELGYDPVYGAR 816
Query: 674 DVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN---KGPQ 710
+ K+ L L+ + +K E F+ G LIN KG Q
Sbjct: 817 PL---KRVLQQQLENPLSQKILEGKFV-PGSLINIEKKGEQ 853
>sp|Q9CKC0|CLPB_PASMU Chaperone protein ClpB OS=Pasteurella multocida (strain Pm70)
GN=clpB PE=3 SV=1
Length = 855
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 533/666 (80%), Gaps = 6/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 154 EESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTA 213
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S + +I
Sbjct: 214 IVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVI 273
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 274 LFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQ 333
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR +PDKAIDLI
Sbjct: 334 KVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI 393
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL +++KE+ + E +
Sbjct: 394 DEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAMLEKELGEKERE 453
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG + LE+ L
Sbjct: 454 YAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYGVIPALEKQLA 513
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EKLL +E L K
Sbjct: 514 QAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEELHK 567
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E +
Sbjct: 568 RVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENA 627
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 628 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFN 687
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K VM+ V +F
Sbjct: 688 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYPSMKELVMSVVGQHF 747
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ +VF L ++NI IA IQL L ++ L + A L I +G+D
Sbjct: 748 RPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDFIGEVGYD 807
Query: 668 LIYGAR 673
+YGAR
Sbjct: 808 PVYGAR 813
>sp|Q8EBE6|CLPB_SHEON Chaperone protein ClpB OS=Shewanella oneidensis (strain MR-1)
GN=clpB PE=3 SV=1
Length = 857
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/706 (58%), Positives = 557/706 (78%), Gaps = 21/706 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAQEEGQVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL +++E+ +E K
Sbjct: 395 DEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLDHLQEELRDVEAK 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ L +IW+ EK + +Q IK ++E+ RL + A R D +S+L+YG + +LE+ L
Sbjct: 455 ASELSEIWRTEKAALAGTQHIKADLEQARLDLEVARRAGDLTRMSELQYGRIPELEKQLD 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREKLL +E L +
Sbjct: 515 LASQAEMQ------DMTLLRNKVTDLEIAEVLSKATGIPVSKMLEGEREKLLQMEVALHE 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+ +F++E +
Sbjct: 569 RVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLARFLFDSESA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 LVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI----IKLAVMNEV 603
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G + +K AVMN V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFGHLSYSEMKSAVMNVV 745
Query: 604 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 663
FRPEF+NRID+ +VF L+ +NI IA+IQ+ L+ +L + + L+I+ AL I+
Sbjct: 746 THSFRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKDYTLEITDEALSLIAE 805
Query: 664 IGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 709
IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 806 IGFDPVYGARPL---KRAL-----QQEMENPLAQKLLRGDLLPGKP 843
>sp|Q7VNH1|CLPB_HAEDU Chaperone protein ClpB OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=clpB PE=3 SV=1
Length = 856
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/704 (58%), Positives = 557/704 (79%), Gaps = 20/704 (2%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KYTIDLTE+A+ GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LQKYTIDLTERAKTGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDE+
Sbjct: 219 QRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVILFIDEI 278
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 279 HTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 338
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 339 PSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 398
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL + +E+ +Y+ LE+
Sbjct: 399 LRMEIDSKPEPLDKLERRIIQLKLERQALQKEKDEASRQRLAKLDEEMTAKAQEYSALEE 458
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
+WK EK+ + +Q +K E+E R+ +++A R +++ +S+L+YG + LE+ L Q
Sbjct: 459 VWKAEKSALLGTQHLKTELENARIAMDQAKRADNFEKMSELQYGTIPALEKQL----QDA 514
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
I+ N LL+TKV EEIAE++S+ TGIP++K+++ E+EKLL +E +L RV+GQ+
Sbjct: 515 IKREEENNDHHLLRTKVTEEEIAEVLSKATGIPITKMMEGEKEKLLRMEQVLHSRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+NAI RSR+GL+D +P GSF+FLGPTGVGKTEL KTL+ +F++E +I+RIDM
Sbjct: 575 EAVEAVANAILRSRAGLADPNKPIGSFLFLGPTGVGKTELSKTLANFLFDDENAIVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYE+GGYLTE VRR+PYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLA----VMNEVKIYFRP 609
DDGRLTD +GRT++FRNT+++MTSNLG+ I+E + EI LA VM+ V +FRP
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGAHLIQE----NAEITYLAMKEMVMSVVSQHFRP 750
Query: 610 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 669
EFINRID+ +VF L++++I +IANIQL L +L + + IS AL IS GFD +
Sbjct: 751 EFINRIDETVVFHPLDQQHIRAIANIQLQRLIRRLAERGYQVTISDTALDHISQAGFDSL 810
Query: 670 YGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
+GAR + K+++ L ++P A I G L+ P +D
Sbjct: 811 FGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNNPVIID 846
>sp|P63284|CLPB_ECOLI Chaperone protein ClpB OS=Escherichia coli (strain K12) GN=clpB
PE=1 SV=1
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>sp|P63286|CLPB_ECOL6 Chaperone protein ClpB OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=clpB PE=3 SV=1
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>sp|P63285|CLPB_ECO57 Chaperone protein ClpB OS=Escherichia coli O157:H7 GN=clpB PE=3
SV=1
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/661 (61%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>sp|Q7CQ01|CLPB_SALTY Chaperone protein ClpB OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=clpB PE=3 SV=1
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>sp|Q7AMH5|CLPB_SALTI Chaperone protein ClpB OS=Salmonella typhi GN=clpB PE=3 SV=1
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/667 (60%), Positives = 536/667 (80%), Gaps = 7/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +
Sbjct: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQ 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+
Sbjct: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L
Sbjct: 515 AATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHS 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+
Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGY 808
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 809 DPVYGAR 815
>sp|Q7UBW5|CLPB_SHIFL Chaperone protein ClpB OS=Shigella flexneri GN=clpB PE=3 SV=2
Length = 857
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/661 (60%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +++TI+ILRG+++++E+ H V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PSVQDTIAILRGVKERFELLHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q +
Sbjct: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
LL+ KV EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+
Sbjct: 521 ------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDM
Sbjct: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K V+ V FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+++VF L ++I SIA IQL L +L + ++ IS ALK +S G+D +YGA
Sbjct: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>sp|Q74X11|CLPB_YERPE Chaperone protein ClpB OS=Yersinia pestis GN=clpB PE=3 SV=2
Length = 857
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/707 (58%), Positives = 554/707 (78%), Gaps = 15/707 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG + +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGTIPELEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ + LL+ +V E+AE+++R TGIPVS++++ ER+KLL +E L +
Sbjct: 515 AATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLKSERDKLLRMEQDLHQ 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM+ V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHH 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+++VF L R ++ SIANIQL L +L + ++KI++ AL+ + GF
Sbjct: 749 FRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 713
D +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 809 DPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVTLD 847
>sp|Q7N788|CLPB_PHOLL Chaperone protein ClpB OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=clpB PE=3 SV=1
Length = 857
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/708 (57%), Positives = 556/708 (78%), Gaps = 15/708 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L +++ + ++I
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKGVLNDLAKQEGNVI 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLI 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++ +E+ E +
Sbjct: 395 DEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKRLEMLNEELLVKERE 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
Y+ LE+ WK EK + +Q IK E+E R+ + +A R D +S+++YG++ LE+ L
Sbjct: 455 YSELEEEWKAEKAALTGTQHIKAELENARISLEQARRSGDLAKMSEIQYGKIPGLEKQLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+Q + + LL+ KV EIA+I++R TGIPV+++++ E++KLL +E L K
Sbjct: 515 AATQAE------SKHMKLLRNKVTDAEIADILARWTGIPVARMLESEKDKLLRMEQELHK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RV+GQDEA++A+SNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVNAISNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+SDVFN
Sbjct: 629 MVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIY 606
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDMIQERFGSLNYDEMKDIVMGIVSHN 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEFINRID+ +VF L R+++ +IA+IQL L +L + + I++ AL+ ++ GF
Sbjct: 749 FRPEFINRIDEAVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVTITQQALEILAEAGF 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 714
D +YGAR + K+++ + ++P A I G L+ P +LD
Sbjct: 809 DPVYGARPL---KRAIQQEI-----ENPLAQKILSGQLLPGKPVTLDV 848
>sp|P17422|CLPB_DICNO Chaperone protein ClpB OS=Dichelobacter nodosus GN=clpB PE=3 SV=2
Length = 860
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/666 (60%), Positives = 541/666 (81%), Gaps = 5/666 (0%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E+ G LKKYT+D+T++ GK+DPVIGRD+EIRRA+Q+LQRRSKNNPVLIGEPGVGKTA
Sbjct: 159 EDKRGALKKYTLDVTQRPLDGKIDPVIGRDEEIRRAMQILQRRSKNNPVLIGEPGVGKTA 218
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLAQRI + VP SL K++L LD+A LLAGTKYRGEFE+RLK +L EI+ II
Sbjct: 219 IVEGLAQRIADRAVPESLKGKRLLSLDLAALLAGTKYRGEFEERLKAVLDEITKADGQII 278
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HTM+G GK EGS+DAGNMLKP L+RG+LHCIGATTL+EYRQY+EKDAA ERRFQ
Sbjct: 279 LFIDEIHTMVGAGKSEGSLDAGNMLKPALARGDLHCIGATTLDEYRQYMEKDAALERRFQ 338
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
K++V+EP +E+TI+ILR LQ++YEVHHG+ ITDPA+VAA++LS+RYIS R +PDKAIDL+
Sbjct: 339 KVIVDEPSVEDTIAILRNLQERYEVHHGINITDPALVAAAQLSHRYISGRKLPDKAIDLM 398
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAAA+I++E+DSKPE+MDK++RRLIQL+IE A+++E D +SK+RL ++ EI E +
Sbjct: 399 DEAAAQIRMELDSKPEVMDKIDRRLIQLQIERMALEKETDAASKRRLSDLEAEIAAQEKE 458
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
YA+LE+IW EK + +IKE+++K+R+++ A R+ D+ S+++YG + E+ L
Sbjct: 459 YADLEEIWLAEKAGNAGAAEIKEQLDKLRVELEAAKRRGDFARASEIQYGLIPAKEKQLL 518
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E Q+ Q P+ L++ KV +EEIAEIVSR TGIPV+K+++ E+E+LL++E +L +
Sbjct: 519 ENEQQTEQRPHR-----LMRNKVTAEEIAEIVSRWTGIPVAKMMEGEKERLLHLETVLNE 573
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ A+ AV+NAIRR+R+GLSD KRP GSF+FLGPTGVGKTELC+TL+ +F++EE+
Sbjct: 574 RVVGQKTAVEAVANAIRRNRAGLSDPKRPIGSFLFLGPTGVGKTELCRTLAQFLFDSEEN 633
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GY++GGYLTE VRRKPYS++L DE+EKA+SDVFN
Sbjct: 634 MVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRKPYSVVLFDEVEKAHSDVFN 693
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 607
LLQ+LD+GRLTD +GRT++FR+T+I+MTSNLGSD I+ + + E +K AVM V +F
Sbjct: 694 TLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSDMIQLLAEKSYEEMKSAVMEIVMAHF 753
Query: 608 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 667
RPEFINRID+ IVF L + ++ IA IQL L+ +L + L + + A+ ++ +G+D
Sbjct: 754 RPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLSVEEDAINQLVELGYD 813
Query: 668 LIYGAR 673
++GAR
Sbjct: 814 PLFGAR 819
>sp|Q7VQF3|CLPB_BLOFL Chaperone protein ClpB OS=Blochmannia floridanus GN=clpB PE=3 SV=1
Length = 872
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/662 (60%), Positives = 521/662 (78%), Gaps = 9/662 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+++T+D+T A LDPVIGRD+EIRR IQVLQRR+KNNPVLIG PGVGKTAIVEGLA
Sbjct: 164 LEQFTVDITSLAEQNNLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGNPGVGKTAIVEGLA 223
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN EVP L + +IL LDIA LLAGTKYRGEFE+R KK+L +S + + I+FIDEL
Sbjct: 224 QRIINKEVPEGLKNSRILSLDIAALLAGTKYRGEFEERFKKVLYAVSKDN-NTILFIDEL 282
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
H M+G GK +GS+DA NM+KP+L+RGELHC+GATTL+EY +YIEKDAA ERRFQKI + E
Sbjct: 283 HVMVGAGKTDGSMDASNMIKPKLARGELHCVGATTLDEYSRYIEKDAALERRFQKIFIIE 342
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P+IE TI+ILRGL+++YE+HH V ITDPAIVAA+ LS RYISDR +PDKAIDLIDEAA+
Sbjct: 343 PNIENTIAILRGLKERYELHHNVHITDPAIVAAATLSNRYISDRQLPDKAIDLIDEAASS 402
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
I+I+IDSKPE +D+L+RR+IQLK+E +A+K+E DE SKKRL ++ E+++ E +Y+ LE
Sbjct: 403 IRIQIDSKPEDLDRLDRRIIQLKLECQALKKESDELSKKRLEILSMELSQKEQEYSVLES 462
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
WK E++ + D Q IK ++EK + ++++ R D +S+L+YG + +LE+ L Q
Sbjct: 463 EWKRERSSLFDIQNIKSDLEKAKTILDQSRRIGDLAQMSELQYGRIPELEKKLFNAIQ-- 520
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
++ K LL+ V EIAE++S+ TGIP+S+I+ E+ KLLN+E +L + V+GQD
Sbjct: 521 ----SSNKKMRLLRNYVSEVEIAEVLSKWTGIPISRILANEKNKLLNMETILHQLVIGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ +SNAIRRSRSGLSD KRP GSFMFLGPTGVGKTELCK LS +F+ + +++RIDM
Sbjct: 577 EAVRVISNAIRRSRSGLSDPKRPIGSFMFLGPTGVGKTELCKALSQFLFDTDNAMVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS+S+L+GAPPGYIGYE G YLTE +RR+PYS++LLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSKLLGAPPGYIGYESGAYLTESIRRRPYSIVLLDEIEKAHLDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGDKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTDN+GR ++F NT+I+MTSNLGSD I K+ + D + +K V+N V YFRPEFI
Sbjct: 697 DDGRLTDNQGRMVDFNNTVIIMTSNLGSDLIQKKFDISDYDTMKKTVLNVVNQYFRPEFI 756
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD-LKISKAALKKISNIGFDLIYG 671
NRID+I+VF L+ K+++ IANIQL L ++L + I+ AL +S IGFD IYG
Sbjct: 757 NRIDEIVVFHPLSIKHLIDIANIQLKYLYSRLEERGYPRTGITNKALLFLSKIGFDPIYG 816
Query: 672 AR 673
AR
Sbjct: 817 AR 818
>sp|Q9A9T4|CLPB_CAUCR Chaperone protein ClpB OS=Caulobacter crescentus (strain ATCC 19089
/ CB15) GN=clpB PE=3 SV=1
Length = 859
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/667 (56%), Positives = 510/667 (76%), Gaps = 9/667 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE LK+Y DLT AR GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 155 EEGYEALKRYARDLTAAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 214
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
IVEGLA RI+NG+VP SL KK+L LD+ L+AG KYRGEFE+RLK +L E++ + II
Sbjct: 215 IVEGLALRIVNGDVPESLKDKKLLSLDMGSLIAGAKYRGEFEERLKAVLGEVTAAEGSII 274
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DA N+LKP L+RGELHC+GATTL+EYR+++EKDAA RRFQ
Sbjct: 275 LFIDEMHTLVGAGKGDGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQ 334
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
+ V EP +E+T+SILRGL++KYEVHHGV I+D AIVAA+ LS RYI+DRF+PDKAIDL+
Sbjct: 335 PVFVSEPTVEDTVSILRGLKEKYEVHHGVRISDSAIVAAATLSNRYIADRFLPDKAIDLV 394
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEA+++++++IDSKPE +D+++RRL+QLKIE EA+ +E D +SK+RL ++ EI+ L+ +
Sbjct: 395 DEASSRVRMQIDSKPEELDEIDRRLVQLKIEREALSKETDAASKQRLENLEVEIDDLQFR 454
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ WK EK + + Q +E ++++R + A R D+ +++YGE+ LER L
Sbjct: 455 SDEMTARWKAEKEKVGGAAQAREALDRLRADLANAQRAGDFARAGQIQYGEIPALERRLA 514
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E D Q L V +E+IA +VSR TG+PV K+++ EREKLL +E+ L
Sbjct: 515 EAEAGDTQ--------ALTPEVVDAEQIAAVVSRWTGVPVEKMLEGEREKLLKMEDELRG 566
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQDEA+ AVS+A+RR+R+GL D +P GSF+FLGPTGVGKTEL K+L+ +F +E +
Sbjct: 567 RVVGQDEALEAVSDAVRRARAGLQDPSKPIGSFLFLGPTGVGKTELTKSLAEFLFADEAA 626
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
I R+DMSE++EKHS+SRLIGAPPGY+GY+EGG LTE +RR+PY ++L DEIEKA+ DVFN
Sbjct: 627 ITRMDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAIRRRPYQVVLFDEIEKAHPDVFN 686
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLG++ + E G D E ++ VMN V+ +
Sbjct: 687 VLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLASQEDGEDVEAVRPMVMNTVRGH 746
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NRID+II+F+ L+R N+ I IQL ++ L M L + AL +++ G+
Sbjct: 747 FRPEFLNRIDEIILFKRLSRHNMGDIVRIQLQRVEKLLADRRMALALDAEALNWLADKGY 806
Query: 667 DLIYGAR 673
D +YGAR
Sbjct: 807 DPVYGAR 813
>sp|O87444|CLPB_PLEBO Chaperone protein ClpB OS=Plectonema boryanum GN=clpB PE=2 SV=2
Length = 873
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/662 (58%), Positives = 528/662 (79%), Gaps = 6/662 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KY DLT+ AR GKLDPVIGRDDEIRR IQ+L RR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 164 LEKYGRDLTQYAREGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLA 223
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI++G+VP SL +K++ LD+ L+AG KYRGEFE+RLK +LKE+++++ +II+FIDE+
Sbjct: 224 QRILSGDVPQSLKDRKLIALDMGALIAGAKYRGEFEERLKAVLKEVTDSRGNIILFIDEI 283
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G G +G++DAGN+LKP L+RGEL CIGATTL+EYR+YIEKDAA ERRFQ++ V++
Sbjct: 284 HTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQ 343
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TISILRGL+++YEVHHGV+I+D A+VAA+ LS RYISDRF+P KAIDL+DEAAAK
Sbjct: 344 PSVEDTISILRGLKERYEVHHGVKISDSALVAAATLSTRYISDRFLPSKAIDLVDEAAAK 403
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+EI SKPE +D+++R+++QL++E ++++E D S+ RL +++E+ + + L
Sbjct: 404 LKMEITSKPEELDEVDRKVLQLEMERLSLQKENDAGSRDRLERLERELADFKEDQSKLNA 463
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
W+ EK++I D Q++KEEI++V L+I +A R D ++LKYG+LN+L R ++E +
Sbjct: 464 QWQAEKSVITDLQKLKEEIDRVNLEIQQAERDYDLNRAAELKYGKLNELNRKVEETESQL 523
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
Q+ + TLL+ +V +IAEI+S+ TGIPVSK+V+ E +KLL ++++L +RV+GQD
Sbjct: 524 SQIQKSGA--TLLREEVLESDIAEIISKWTGIPVSKLVESEMQKLLQLDDVLHQRVIGQD 581
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AVS+AI+RSR+GLSD RP SF+FLGPTGVGKTEL K L+A +F+ EE+++RIDM
Sbjct: 582 EAVTAVSDAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAAFLFDTEEAMVRIDM 641
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS+SRLIGAPPGY+GYEEGG LTE VRR+PYS+IL DEIEKA+ DVFN++LQIL
Sbjct: 642 SEYMEKHSVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQIL 701
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKIYFRPEF 611
DDGR+TD++GRT++F+NTII+MTSN+GS I E D E I VM + FRPEF
Sbjct: 702 DDGRVTDSQGRTVDFKNTIIIMTSNIGSQYIFEYGGDDDRYEEILSRVMEAMLSNFRPEF 761
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NRID+II+F L + + I IQ + L+++L + M LK+S AAL ++ GFD +YG
Sbjct: 762 LNRIDEIIIFHSLQKAQLREIVKIQTHRLESRLAR-KMSLKLSDAALDFLAE-GFDPVYG 819
Query: 672 AR 673
AR
Sbjct: 820 AR 821
>sp|Q7NFE9|CLPB_GLOVI Chaperone protein ClpB OS=Gloeobacter violaceus (strain PCC 7421)
GN=clpB PE=3 SV=1
Length = 872
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/662 (56%), Positives = 529/662 (79%), Gaps = 4/662 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KY DLT+ AR GKLDPVIGRD+EIRR IQ+L RR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 164 LDKYGRDLTQLAREGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLA 223
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI++G+VP SL +K++ LD+ L+AG+KYRGEFE+RLK +L E++ ++ I++FIDE+
Sbjct: 224 QRIVSGDVPESLQGRKLIALDMGALIAGSKYRGEFEERLKAVLNEVTKSEGQIVLFIDEI 283
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G G +G++DAGN+LKP L+RGEL CIGATTL+EYR+YIEKDAA ERRFQ++ V++
Sbjct: 284 HTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQ 343
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TISILRGL+++YEVHHGV I+D A+VAA+ LS+RYISDRF+PDKAIDL+DEAAAK
Sbjct: 344 PTVEDTISILRGLKERYEVHHGVRISDSALVAAAVLSHRYISDRFLPDKAIDLMDEAAAK 403
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+EI SKPE +D+++R+++QL++E ++ +E D +S+ RL ++KE+ L+ + +L
Sbjct: 404 LKMEITSKPEALDEVDRKILQLEMERLSLAKESDAASRDRLERLEKELADLKEEQRSLNA 463
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
W+ EK +I Q +KEEI++V ++I +A R D ++LKYG+L++L++ L + + K
Sbjct: 464 QWQAEKDIIDQVQAVKEEIDQVNVQIQQAERDYDLNRAAELKYGKLSELQKRL-DAADKQ 522
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + + +LL+ +V E+IAEI+S+ TGIPVSK+V EREKLL++E+ L KRVVGQ+
Sbjct: 523 LSETQTSGR-SLLREEVTEEDIAEIISKWTGIPVSKLVASEREKLLHLEDELHKRVVGQE 581
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ VS AI+RSR+GL+D RP SF+FLGPTGVGKTEL K L++ +F++E +++RIDM
Sbjct: 582 EAVRIVSEAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALASFLFDDENAMVRIDM 641
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS+SRLIGAPPGY+GY+EGG LTE VRR+PY+++L DEIEKA++DVFN+LLQ+L
Sbjct: 642 SEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPYAVVLFDEIEKAHNDVFNVLLQVL 701
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKIYFRPEF 611
DDGR+TD++GRTI+F+N +I+MTSN+GSD I + D E ++ VM ++++FRPEF
Sbjct: 702 DDGRITDSQGRTIDFKNAVIIMTSNIGSDAILRLGGNDAYYEQMREEVMRAMQVHFRPEF 761
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NR+DDII+FR L R + +I +Q+ L+ +L + LK+S+AA+ I G+D +YG
Sbjct: 762 LNRVDDIIIFRNLRRDQLAAIVKLQIARLEKRLADRKITLKLSEAAIDYIVEAGYDPVYG 821
Query: 672 AR 673
AR
Sbjct: 822 AR 823
>sp|P53533|CLPB1_SYNE7 Chaperone protein ClpB 1 OS=Synechococcus elongatus (strain PCC
7942) GN=clpB1 PE=2 SV=3
Length = 874
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/662 (57%), Positives = 527/662 (79%), Gaps = 4/662 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KY DLTE AR GKLDPVIGRDDEIRR IQ+L RR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 163 LEKYGRDLTEMARRGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLA 222
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIING+VP SL ++++ LD+ L+AG K+RGEFE+RLK +LKE+++++ II+FIDE+
Sbjct: 223 QRIINGDVPQSLKDRRLIALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGIIILFIDEI 282
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G G V+GS+DAGN+LKP L+RGEL CIGATTL+EYRQYIEKDAA ERRFQ++ V++
Sbjct: 283 HTVVGAGAVQGSMDAGNLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVFVDQ 342
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TISILRGL+++YEVHHGV I+D A+VAA+ LS RYISDRF+PDKAIDL+DE+AA+
Sbjct: 343 PTVEDTISILRGLKERYEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDESAAR 402
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+EI SKPE +D+++R+++QL++E ++++E D +S++RL ++KE+ L+ + +L
Sbjct: 403 LKMEITSKPEELDEIDRKILQLEMERLSLQKESDLASQERLQRLEKELADLKEEQRSLSS 462
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
W+ EK +I D Q +KEEI++V L I +A R D ++LKYG+L +L+R L E +
Sbjct: 463 QWQAEKDVITDIQSVKEEIDQVNLLIQQAERDYDLNKAAELKYGKLTELQRKLNEM-EGG 521
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + + K +LL+ +V +IAEI+S+ TGIPVSK+V+ E +KLLN++ L +RV+GQ+
Sbjct: 522 LATTHTSGK-SLLREEVTEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQE 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+SAV++AI+RSR+GLSD KRP SF+FLGPTGVGKTEL K L+A +F+ E+++IRIDM
Sbjct: 581 EAVSAVADAIQRSRAGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKH++SRLIGAPPGY+GY+EGG LTE VRR+PYS+IL DEIEKA+ DVFN++LQIL
Sbjct: 641 SEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQIL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKIYFRPEF 611
DDGR+TD+RGRT++F+NTI+++TSN+GS I ++ D E ++ V ++ FRPEF
Sbjct: 701 DDGRVTDSRGRTVDFKNTILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEF 760
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NR+D+ I+F L + + I IQL+ L+ +L + L +S A+ + IGFD +YG
Sbjct: 761 LNRVDETIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYG 820
Query: 672 AR 673
AR
Sbjct: 821 AR 822
>sp|Q6N1H2|CLPB_RHOPA Chaperone protein ClpB OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=clpB PE=3 SV=1
Length = 879
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/661 (56%), Positives = 502/661 (75%), Gaps = 8/661 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY DLT+ AR GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 163 LKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
RI+NG+VP SL KK+L LD+ L+AG KYRGEFE+RLK +L E++ + II+FIDE+
Sbjct: 223 LRILNGDVPESLKDKKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGGIILFIDEM 282
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK +G++DA N+LKP L+RGELHCIGATTL+EYR+++EKDAA RRFQ + V E
Sbjct: 283 HTLVGAGKADGAMDASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSE 342
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+T+SILRGL+ KYE HHGV I D A+VAA LS RYI+DRF+PDKAIDL+DEAAA+
Sbjct: 343 PTVEDTVSILRGLKDKYEQHHGVRIADSALVAAVTLSNRYITDRFLPDKAIDLMDEAAAR 402
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+++DSKPE +D ++R +++LKIE EA+K+E D SK RL+ ++KE+ LE K A L +
Sbjct: 403 LKMQVDSKPEELDSMDREIVRLKIEQEALKKETDPGSKARLVTLEKELADLEEKSAALTQ 462
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
W EK + D+Q++K E++ +R+++ A R+ ++Q +L YG + +LE+ + E
Sbjct: 463 RWSAEKNKLSDAQKLKSELDALRIELANAQRRGEYQRAGELAYGRIPELEKKIAE----- 517
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ N N +++ V + IA++VSR TG+PV K+++ E+EKLL +E L +RVVGQ
Sbjct: 518 --IEANENSGAMVEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKLLRMEEQLGQRVVGQF 575
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AVS A+RR+R+GL D RP GSFMFLGPTGVGKTEL K L+ +F++E +++RIDM
Sbjct: 576 EAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDM 635
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SEF+EKHS++RLIGAPPGY+GY+EGG LTE VRR+PY +IL DEIEKA+ DVFN+LLQ+L
Sbjct: 636 SEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVL 695
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+IVMTSNLGS+ + +G D ++ VM V+ +FRPEF+
Sbjct: 696 DDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQPEGEDTGAVREQVMGMVRAHFRPEFL 755
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+II+F L + + I +IQ L L + L + AA ++ G+D YGA
Sbjct: 756 NRVDEIILFHRLQKSEMGRIVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGA 815
Query: 673 R 673
R
Sbjct: 816 R 816
>sp|Q7CEG6|CLPB_BRUSU Chaperone protein ClpB OS=Brucella suis biovar 1 (strain 1330)
GN=clpB PE=2 SV=1
Length = 874
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/700 (53%), Positives = 524/700 (74%), Gaps = 16/700 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E + LKKY DLTE AR GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 156 ESNYDALKKYARDLTEDARAGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 215
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLA RI+NG+VP SL K+++ LD+ L+AG KYRGEFE+RLK +L E+ II
Sbjct: 216 IAEGLALRIVNGDVPESLKDKQLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQII 275
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DA N+LKP L+RGELHC+GATTL EYR+Y+EKDAA RRFQ
Sbjct: 276 LFIDEMHTLVGAGKTDGAMDASNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQ 335
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
+ V+EP +E+TISILRGL++KYE HH V ++D A+VAA+ LS RYI+DRF+PDKAIDL+
Sbjct: 336 PVFVDEPTVEDTISILRGLKEKYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLV 395
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++ +DSKPE +D+++RR++QLKIE EA+K E D +SK RL I+KE++ LE +
Sbjct: 396 DEAASRLRMHVDSKPEELDEIDRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEE 455
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A L W+ EK + + +K ++E+ R + A R ++Q +L YG + +LE+ L
Sbjct: 456 SAELTAKWQAEKQKLGLAADLKRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLA 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ ++ NK +LL+ V + +A+++SR TGIPV ++++ EREKLL +E+ + K
Sbjct: 516 DAESQE-------NKGSLLEETVTPDHVAQVISRWTGIPVDRMLEGEREKLLRMEDEIGK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ A+S A+RR+R+GL D RP GSF+FLGPTGVGKTEL K L++ +F ++ +
Sbjct: 569 RVVGQGEAVQAISKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFQDDTA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGG LTE VRR+PY +IL DEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLG++ + + E D E ++ VM V+
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEYLVNLGENDDVETVRDDVMGVVRAS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D+II+F L R+++ +I +IQ+ L+ L + L++ A + ++N G+
Sbjct: 749 FRPEFLNRVDEIILFHRLRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
D YGAR + ++ K++ + P A I LGD+++
Sbjct: 809 DPAYGARPLK------RVIQKEV--QDPLAERILLGDILD 840
>sp|P74459|CLPB1_SYNY3 Chaperone protein ClpB 1 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=clpB1 PE=3 SV=1
Length = 898
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/677 (55%), Positives = 527/677 (77%), Gaps = 13/677 (1%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
EE L KY DLTE+AR GKLDPVIGRD+EIRR IQVL RRSKNNPVLIGEPGVGKTA
Sbjct: 157 EEKYEALDKYGRDLTEQARQGKLDPVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTA 216
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLAQRIING+VP SL +++++ LD+ L+AG KYRGEFE+RL+ ++KE++N+ II
Sbjct: 217 IAEGLAQRIINGDVPESLKNRQLISLDMGSLIAGAKYRGEFEERLRSVMKEVTNSDGQII 276
Query: 128 IFIDELHTMIGTGKVEGS--IDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERR 185
+FIDE+HT++G G EGS +DAGN+LKP L+RGEL CIGATTL+EYR+ IEKD A ERR
Sbjct: 277 LFIDEVHTVVGAGGREGSGSMDAGNLLKPMLARGELRCIGATTLDEYRKNIEKDPALERR 336
Query: 186 FQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAID 245
FQ++ V++P +++TISILRGL++KYEVHHGV+ITD A+VAA+ LS+RYI DRF+PDKAID
Sbjct: 337 FQQVYVKQPSVDDTISILRGLKEKYEVHHGVKITDSALVAAATLSHRYIQDRFLPDKAID 396
Query: 246 LIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKRE-------YDESSKKRLLLIK 298
L+DEAAA++K+EI SKP ++ ++RRL+QL++E +++ E D+SSK+RL I+
Sbjct: 397 LVDEAAARLKMEITSKPVELEDIDRRLMQLQMEKLSLEGEEKRPGLGADKSSKERLEKIQ 456
Query: 299 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 358
+EI +LE + L W EK ++++ +KE+ +++RL++ KA R +DW+ +K+KYGE
Sbjct: 457 QEITELEGQQQELSGQWLSEKQMLEEINTLKEKEQELRLQVEKAERATDWEKAAKIKYGE 516
Query: 359 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 418
L L+ ++EK K +++ + N TLL+ +V +IAEIV+ TGIP++++++ ER+KL
Sbjct: 517 LEVLQHDIEEKESKLLEIQGSGN--TLLREQVTESDIAEIVAGWTGIPMNRLMETERQKL 574
Query: 419 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 478
L +E L +RV+GQ EA++AVS AIRR+R+G+ D RP GSF+F+GPTGVGKTEL + L+
Sbjct: 575 LQLEGHLHQRVIGQKEAVAAVSAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARALA 634
Query: 479 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 538
+F++EE+++RIDMSE++EKH++SRLIGAPPGY+GYEEGG L+E VRR+PYS++LLDE+
Sbjct: 635 GFLFDSEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEV 694
Query: 539 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL- 597
EKA+ DVFNILLQ+LDDGR+TD++GR ++FRNTIIVMTSN+GSD I + D + K+
Sbjct: 695 EKAHLDVFNILLQVLDDGRITDSQGRVVDFRNTIIVMTSNIGSDHILSLSADDADYDKMQ 754
Query: 598 -AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 656
V+ ++ +FRPEF+NRIDD+I+F L R + I +Q+ ++ L + + L +S A
Sbjct: 755 KQVLQSLRKHFRPEFLNRIDDLIIFHTLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDA 814
Query: 657 ALKKISNIGFDLIYGAR 673
AL I + G+D YGAR
Sbjct: 815 ALDHIVSAGYDPTYGAR 831
>sp|Q8YJ91|CLPB_BRUME Chaperone protein ClpB OS=Brucella melitensis biotype 1 (strain 16M
/ ATCC 23456 / NCTC 10094) GN=clpB PE=3 SV=2
Length = 874
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/700 (53%), Positives = 524/700 (74%), Gaps = 16/700 (2%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E + LKKY DLTE AR GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 156 ESNYDALKKYARDLTEDARAGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 215
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLA RI+NG+VP SL K+++ LD+ L+AG KYRGEFE+RLK +L E+ II
Sbjct: 216 IAEGLALRIVNGDVPESLKDKQLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQII 275
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DA N+LKP L+RGELHC+GATTL EYR+Y+EKDAA RRFQ
Sbjct: 276 LFIDEMHTLVGAGKTDGAMDASNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQ 335
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
+ V+EP +E+TISILRGL++KYE HH V ++D A+VAA+ LS RYI+DRF+PDKAIDL+
Sbjct: 336 PVFVDEPTVEDTISILRGLKEKYEQHHKVRVSDSALVAAAMLSNRYITDRFLPDKAIDLV 395
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++++DSKPE +D+++RR++QLKIE EA+K E D +SK RL I+KE++ LE +
Sbjct: 396 DEAASRLRMQVDSKPEELDEIDRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEE 455
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
A L W+ EK + + +K ++E+ R + A R ++Q +L YG + +LE+ L
Sbjct: 456 SAELTAKWQAEKQKLGLAADLKRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLA 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
+ ++ NK +LL+ V + +A+++SR TGIPV ++++ EREKLL +E+ + K
Sbjct: 516 DAESQE-------NKGSLLEETVTPDHVAQVISRWTGIPVDRMLEGEREKLLRMEDEIGK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ A+S A+RR+R+GL D RP GSF+FLGPTGVGKTEL K L++ +F ++ +
Sbjct: 569 RVVGQGEAVQAISKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFQDDTA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGG LTE VRR+PY +IL DEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +G T++FRNT+I+MTSNLG++ + + E D E ++ VM V+
Sbjct: 689 VLLQVLDDGRLTDGQGHTVDFRNTVIIMTSNLGAEYLVNLGENDDVETVRDDVMGVVRAS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D+II+F L R+++ +I +IQ+ L+ L + L++ A + ++N G+
Sbjct: 749 FRPEFLNRVDEIILFHRLRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 706
D YGAR + ++ K++ + P A I LGD+++
Sbjct: 809 DPAYGARPLK------RVIQKEV--QDPLAERILLGDILD 840
>sp|Q8YM56|CLPB2_NOSS1 Chaperone protein ClpB 2 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=clpB2 PE=3 SV=2
Length = 872
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/663 (55%), Positives = 525/663 (79%), Gaps = 6/663 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KY DLTE AR G+LDPVIGRDDEIRR IQ+L RR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 163 LEKYGRDLTEAARKGQLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLA 222
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ G+VP SL +K++ LD+ ++AG K+RGEFE+RLK +LKE++ + +I++FIDE+
Sbjct: 223 QRIVAGDVPQSLKDRKLISLDMGAMIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEI 282
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G G +G++DAGN+LKP L+RGEL CIGATTL+EYR+YIEKDAA ERRFQ++ V++
Sbjct: 283 HTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQ 342
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TISILRGL+++YEVHHGV+I+D ++VAA+ LS RYISDRF+PDKAIDL+DEAAA+
Sbjct: 343 PSVEDTISILRGLKERYEVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAAR 402
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+EI SKPE +D+++R+++QL++E ++++E D +S++RL ++KE+ L+ + L
Sbjct: 403 LKMEITSKPEELDEIDRKILQLEMEKLSLQKESDAASRERLERLEKELADLKEEQRTLNT 462
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
W+ EK +I Q +KEEI+KV L+I +A R D ++LKYG L L R L E ++++
Sbjct: 463 QWQSEKDVINKLQSVKEEIDKVNLEIQQAERNYDLNRAAELKYGNLTDLHRRL-EATERE 521
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ K +LL+ +V +IAEI+S+ TGIP+SK+V+ E+EKLL++E+ L RV+GQD
Sbjct: 522 LSQTQGTGK-SLLREEVTEADIAEIISKWTGIPISKLVESEKEKLLHLEDELHHRVIGQD 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV++AI+RSR+GL+D RP SF+FLGPTGVGKTEL K L++ +F+ E++++RIDM
Sbjct: 581 EAVTAVADAIQRSRAGLADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDALVRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKH++SRLIGAPPGY+GYEEGG LTE +RR+PY++IL DEIEKA+ DVFNI LQIL
Sbjct: 641 SEYMEKHAVSRLIGAPPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQIL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK---EIIKLAVMNEVKIYFRPE 610
DDGR+TD +G T++F+NTII+MTSN+GS I ++ GD + ++ VM ++ FRPE
Sbjct: 701 DDGRVTDAQGHTVDFKNTIIIMTSNIGSQYILDI-AGDNSRYDEMRHRVMEAMRNSFRPE 759
Query: 611 FINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIY 670
F+NRID++I+F L++K + I +Q+ LK +L + L++S AL ++ +G+D ++
Sbjct: 760 FLNRIDEVIIFHSLDKKELRQIVQLQVERLKARLDDRKISLRLSDVALDFLAEVGYDPVF 819
Query: 671 GAR 673
GAR
Sbjct: 820 GAR 822
>sp|P74361|CLPB2_SYNY3 Chaperone protein ClpB 2 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=clpB2 PE=3 SV=1
Length = 872
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/662 (56%), Positives = 522/662 (78%), Gaps = 4/662 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KY DLTE AR GKLDPVIGRD+E+RR IQ+L RR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 163 LEKYGRDLTELAREGKLDPVIGRDEEVRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLA 222
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRIIN +VP SL +K++ LD+ L+AG KYRGEFE+RLK +LKE++++Q II+FIDE+
Sbjct: 223 QRIINHDVPESLRDRKLISLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEI 282
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G G +G++DAGN+LKP L+RG L CIGATTL+EYR+YIEKDAA ERRFQ++LV+E
Sbjct: 283 HTVVGAGATQGAMDAGNLLKPMLARGALRCIGATTLDEYRKYIEKDAALERRFQEVLVDE 342
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P++ +TISILRGL+++YEVHHGV+I D A+VAA+ LS RYISDRF+PDKAIDL+DEAAAK
Sbjct: 343 PNVLDTISILRGLKERYEVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAK 402
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+EI SKPE +D+++R+++QL++E +++RE D +SK+RL ++KE+ + + + L
Sbjct: 403 LKMEITSKPEELDEVDRKILQLEMERLSLQRENDSASKERLEKLEKELADFKEEQSKLNG 462
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
W+ EKT+I + +KE I++V L+I +A R D+ ++L+YG+L L+R + E +
Sbjct: 463 QWQSEKTVIDQIRTVKETIDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQV-EALETQ 521
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ + K +LL+ +V +IAEI+S+ TGIP+SK+V+ E+EKLL++E+ L RV+GQD
Sbjct: 522 LAEQQTSGK-SLLREEVLESDIAEIISKWTGIPISKLVESEKEKLLHLEDELHSRVIGQD 580
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA++AV+ AI+RSR+GLSD RP SF+FLGPTGVGKTEL K L+ +F+ EE+++RIDM
Sbjct: 581 EAVTAVAEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDM 640
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKH++SRL+GAPPGY+GYEEGG LTE +RR+PYS+IL DEIEKA+ DVFN++LQIL
Sbjct: 641 SEYMEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQIL 700
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIKLAVMNEVKIYFRPEF 611
DDGRLTD +G ++F+NTII+MTSNLGS I ++ D E ++ VM+ ++ FRPEF
Sbjct: 701 DDGRLTDAQGHVVDFKNTIIIMTSNLGSQYILDVAGDDSRYEEMRSRVMDVMRENFRPEF 760
Query: 612 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 671
+NR+D+ I+F L + + SI IQ+ L +L + + LK++ AL ++ +G+D +YG
Sbjct: 761 LNRVDETIIFHGLQKSELRSIVQIQIQSLATRLEEQKLTLKLTDKALDFLAAVGYDPVYG 820
Query: 672 AR 673
AR
Sbjct: 821 AR 822
>sp|Q98G96|CLPB_RHILO Chaperone protein ClpB OS=Rhizobium loti (strain MAFF303099)
GN=clpB PE=3 SV=1
Length = 868
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/703 (52%), Positives = 528/703 (75%), Gaps = 22/703 (3%)
Query: 8 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 67
E++ LKKY DLT AR GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 156 EQNYDALKKYARDLTADARAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 215
Query: 68 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 127
I EGLA RI+NG+VP SL K+++ LD+ L+AG KYRGEFE+RLK +L E+++ +II
Sbjct: 216 IAEGLALRIVNGDVPESLKDKQLMALDMGALIAGAKYRGEFEERLKAVLSEVTSANGNII 275
Query: 128 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 187
+FIDE+HT++G GK +G++DA N+LKP L+RGELHC+GATTL+EYR+++EKD A RRFQ
Sbjct: 276 LFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQ 335
Query: 188 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 247
+ V+EP +E+T+SILRGL++KYE HH V I+D A+VAA+ LS RYI+DRF+PDKAIDL+
Sbjct: 336 PVFVDEPTVEDTVSILRGLKEKYEQHHKVRISDSALVAAATLSNRYIADRFLPDKAIDLV 395
Query: 248 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 307
DEAA+++++++DSKPE +D+++RR++QLKIE EA+K E D++SK RL+ ++KE+ LE +
Sbjct: 396 DEAASRLRMQVDSKPEALDEIDRRIMQLKIEREALKVETDDASKDRLVRLEKELVGLEEE 455
Query: 308 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 367
+ W+ EK + + +K+++++ R ++ A RK ++Q +L YG++ +LE+ LK
Sbjct: 456 STEITAKWQAEKQKLGLAADLKKQLDEARNELAIAQRKGEFQRAGELAYGKIPELEKKLK 515
Query: 368 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 427
E +D K +++ V + +A IVSR TGIPV K++Q ER+KLL +E+ + K
Sbjct: 516 EAEAQD-------GKAGMVEEVVTPDHVAHIVSRWTGIPVDKMLQGERDKLLRMEDEIGK 568
Query: 428 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 487
RVVGQ EA+ AVS A+RR+R+GL D RP GSF+FLGPTGVGKTEL K L++ +F+++ +
Sbjct: 569 RVVGQGEAVQAVSKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFDDDSA 628
Query: 488 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 547
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGG LTE VRR+PY ++L DEIEKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFN 688
Query: 548 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKLAVMNEVKIY 606
+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLG++ + + E D + ++ VM V+
Sbjct: 689 VLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLVNLGEDQDVDAVRDEVMGVVRAS 748
Query: 607 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 666
FRPEF+NR+D++I+F L RK++ I IQ L++ L+ + L + A++ ++ G+
Sbjct: 749 FRPEFLNRVDEVILFHRLRRKDMDRIVEIQFKRLESLLVDRKITLSLDHEAIEWLAAKGY 808
Query: 667 DLIYGARDVHGCKKSLSILLKKIHKK---SPEANFIFLGDLIN 706
D YGAR LK++ +K P A I LG++++
Sbjct: 809 DPAYGARP-----------LKRVMQKELQDPLAEKILLGEILD 840
>sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic OS=Arabidopsis thaliana
GN=CLPB3 PE=1 SV=1
Length = 968
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/667 (56%), Positives = 520/667 (77%), Gaps = 7/667 (1%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L+KY DLT AR GKLDPVIGRDDEIRR IQ+L RR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 237 LEKYGKDLTAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLA 296
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
QRI+ G+VP +L+++K++ LD+ L+AG KYRGEFEDRLK +LKE+++++ II+FIDE+
Sbjct: 297 QRIVQGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEI 356
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G G G++DAGN+LKP L RGEL CIGATTL+EYR+YIEKD A ERRFQ++ V++
Sbjct: 357 HTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQ 416
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TISILRGL+++YE+HHGV I+D A+V A+ LS RYIS RF+PDKAIDL+DEAAAK
Sbjct: 417 PTVEDTISILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAK 476
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+EI SKP +D+L+R +I+L++E ++ + D++S++RL I+ E+ L+ K A L +
Sbjct: 477 LKMEITSKPTALDELDRSVIKLEMERLSLTNDTDKASRERLNRIETELVLLKEKQAELTE 536
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
W++E++++ Q IKEEI++V L+I +A R+ D ++LKYG LN L+R L E ++K+
Sbjct: 537 QWEHERSVMSRLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLNE-AEKE 595
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ ++ K ++ + +V +IAEIVS+ TGIPVSK+ Q ER+KLL++E L KRVVGQ+
Sbjct: 596 LNEYLSSGK-SMFREEVLGSDIAEIVSKWTGIPVSKLQQSERDKLLHLEEELHKRVVGQN 654
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
A++AV+ AI+RSR+GLSD RP SFMF+GPTGVGKTEL K L++ +FN EE+++RIDM
Sbjct: 655 PAVTAVAEAIQRSRAGLSDPGRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDM 714
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKH++SRLIGAPPGY+GYEEGG LTE VRR+PYS+IL DEIEKA+ DVFN+ LQIL
Sbjct: 715 SEYMEKHAVSRLIGAPPGYVGYEEGGQLTETVRRRPYSVILFDEIEKAHGDVFNVFLQIL 774
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-----EIIKLAVMNEVKIYFR 608
DDGR+TD++GRT++F NT+I+MTSN+GS I D E IK VMN + FR
Sbjct: 775 DDGRVTDSQGRTVSFTNTVIIMTSNVGSQFILNNTDDDANELSYETIKERVMNAARSIFR 834
Query: 609 PEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDL 668
PEF+NR+D+ IVF+ L+R+ I I +QL ++ ++ M + I+ AA+ + ++G+D
Sbjct: 835 PEFMNRVDEYIVFKPLDREQINRIVRLQLARVQKRIADRKMKINITDAAVDLLGSLGYDP 894
Query: 669 IYGARDV 675
YGAR V
Sbjct: 895 NYGARPV 901
>sp|Q7X2S8|CLPB_MEIRU Chaperone protein ClpB OS=Meiothermus ruber GN=clpB PE=3 SV=1
Length = 854
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/675 (55%), Positives = 517/675 (76%), Gaps = 14/675 (2%)
Query: 5 TLDEEHI----GYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 60
T++ EH L++Y +DLT +A GKLDPVIGRD+EIRR IQ+L RR+KNNPVLIGE
Sbjct: 140 TVNSEHAEGTYNALEQYGLDLTRQAEEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGE 199
Query: 61 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 120
PGVGKTA+VEGLAQRI+ G+VP L K+I+ L + LLAG KYRGEFE+RLK +++E
Sbjct: 200 PGVGKTAVVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQETV 259
Query: 121 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 180
+ II+FIDE+HT++G GK EG++DAGNMLKP L+RGELH IGATTL+EYR+ IEKD
Sbjct: 260 QSAGQIILFIDEIHTVVGAGKAEGAVDAGNMLKPALARGELHLIGATTLDEYRE-IEKDP 318
Query: 181 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 240
A ERRFQ + V+EP +EET+SILRG+++KYEVHHGV I+DPA++AA++LS+RYI+DR +P
Sbjct: 319 ALERRFQPVFVDEPSLEETVSILRGIKEKYEVHHGVRISDPALIAAAQLSHRYIADRKLP 378
Query: 241 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 300
DKAIDL+DEAAA++++ ++S PE +D L RR +QL+IE EA+K+E D SK RL ++KE
Sbjct: 379 DKAIDLVDEAAARLRMALESSPESIDALNRRKLQLEIEREALKKETDAESKFRLGELEKE 438
Query: 301 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 360
I LE + + W+ E+ +++ + ++ +++VR +I +A R D + L+YGEL
Sbjct: 439 IADLEEEIRKQQAEWEAEREIMQKLRAAQQRLDEVRTQIEQAERAYDLNKAAPLRYGELP 498
Query: 361 KLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLN 420
KLE+ + E L + ++ V E+IA IVSR TGIPV+K+++ EREKLL
Sbjct: 499 KLEQEVNE-------LADRMAGAQFVRPMVTEEDIAAIVSRWTGIPVAKLMEGEREKLLR 551
Query: 421 IENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSAC 480
+E+ L KRVVGQDEAI AV++AIRR+R+GL D RP GSF+FLGPTGVGKTEL KTL+A
Sbjct: 552 LEDELHKRVVGQDEAIVAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAAS 611
Query: 481 IFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEK 540
+F+ EE+++RIDMSE+ EKH+++RLIGAPPGY+GYEEGG LTE VRR+PYS+IL DEIEK
Sbjct: 612 LFDTEENMVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEK 671
Query: 541 ANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK-EIIKLA 598
A+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+I++TSN+GS I E ++ G E I+
Sbjct: 672 AHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIILTSNIGSPLIFEGIQSGQSYETIRER 731
Query: 599 VMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAAL 658
V ++ +FRPEF+NR+D+I+VFR L R+ I +I IQL ++ +L + + L++S+ AL
Sbjct: 732 VFGVLQQHFRPEFLNRLDEIVVFRPLAREQIAAIVQIQLEAVRKRLAERRITLELSQEAL 791
Query: 659 KKISNIGFDLIYGAR 673
++ G+D ++GAR
Sbjct: 792 DFLAQRGYDPVFGAR 806
>sp|Q6MIV0|CLPB_BDEBA Chaperone protein ClpB OS=Bdellovibrio bacteriovorus (strain ATCC
15356 / DSM 50701 / NCIB 9529 / HD100) GN=clpB PE=3 SV=1
Length = 855
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/661 (55%), Positives = 520/661 (78%), Gaps = 3/661 (0%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
L KY DLT A GKLDPV+GRD+EIRR +QVL RR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 157 LNKYARDLTALAAEGKLDPVVGRDEEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 216
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
RII +VP++L+ KK++ LD+ L+AG KYRGEFEDRLK ++KE++++ II+FIDEL
Sbjct: 217 LRIIKQDVPDNLIGKKLMSLDMGALIAGAKYRGEFEDRLKAVIKEVTSSDGQIILFIDEL 276
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT++G GK EG++DAG +LKP L+RGEL CIGATTL+EYR+YIEKDAA ERRFQ ++VEE
Sbjct: 277 HTLVGAGKTEGAMDAGQLLKPALARGELRCIGATTLDEYRKYIEKDAALERRFQTVMVEE 336
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+ I+ILRGL++KYEVHHG+ ITD A+V+A +LS+RYI++RF+PDKAIDLIDEAA+K
Sbjct: 337 PSVEDAITILRGLKEKYEVHHGIRITDAALVSAVKLSHRYITNRFLPDKAIDLIDEAASK 396
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+ IE S PE +DK+ER L+QL+IE EA+K+E DES+++RL +I KEI +L K L +
Sbjct: 397 LGIETRSVPEEVDKIERELMQLRIEKEALKKEKDESARERLAVIDKEITELNAKNQLLRE 456
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
W++EK I+ +++K +IE +++ + KA R+ D ++LKYG+L + E+ LK ++
Sbjct: 457 QWEFEKGGIEGIKKLKADIEDLKVAVAKAEREGDLGKAAELKYGKLPEAEKKLKALEERS 516
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
+ ++++ +LK +VG E++AE+V++ TGIPVSK+++ E +KLL++E+ L RVVGQD
Sbjct: 517 KEGAKSSSENRMLKEEVGPEDVAEVVAKWTGIPVSKMLESESQKLLHMEDSLKHRVVGQD 576
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
A++ V++AIRR+R+ +SD RP G+FMFLGPTGVGKTE K L+ +F++E++++RIDM
Sbjct: 577 HALTIVADAIRRARAEISDPNRPIGTFMFLGPTGVGKTETVKALAEFLFDDEQAVVRIDM 636
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKH++SRLIGAPPGY+GYEEGG LTE VRR+PYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 637 SEYMEKHAVSRLIGAPPGYVGYEEGGQLTESVRRRPYSVVLLDEVEKAHPDVFNILLQVL 696
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNE-VKIYFRPEFI 612
DDGRLTD +GRT++F+NT+++MTSN+GS I ++ G E K +NE ++ FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVLIMTSNVGSQSI--LDPGMSENQKREAVNEALRERFRPEFL 754
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NRID+I++F+ L I I +QL+++ +L + + ++ A+ ++ G+D IYGA
Sbjct: 755 NRIDEIVMFKSLGEAQISGIVKVQLDLVAQRLRAKKIGIDFNQEAIDFLAKKGYDPIYGA 814
Query: 673 R 673
R
Sbjct: 815 R 815
>sp|Q89UL2|CLPB_BRAJA Chaperone protein ClpB OS=Bradyrhizobium japonicum (strain USDA
110) GN=clpB PE=3 SV=1
Length = 879
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/695 (54%), Positives = 519/695 (74%), Gaps = 22/695 (3%)
Query: 14 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 73
LKKY DLT+ AR GKLDPVIGRD+EIRR IQVL RR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 163 LKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 222
Query: 74 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 133
RI+NG+VP SL KK+L LD+ L+AG KYRGEFE+RLK +L+E++ ++ I+FIDE+
Sbjct: 223 LRIVNGDVPESLKDKKLLSLDLGALIAGAKYRGEFEERLKAVLQEVTGSEGTFILFIDEM 282
Query: 134 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 193
HT+IG GK +G++DA N+LKP L+RGELHCIGATTL+EY++++EKDAA RRFQ I V E
Sbjct: 283 HTLIGAGKGDGAMDASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSE 342
Query: 194 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 253
P +E+TISILRGL+ KYE HHGV ITD A+VA++ LS RYI+DRF+PDKAIDL+DEAAA+
Sbjct: 343 PSVEDTISILRGLKDKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAAR 402
Query: 254 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 313
+K+++DSKPE +D ++R +I+LKIE EA+K+E D SK RL ++KE+ +LE K A+L
Sbjct: 403 LKMQVDSKPEELDSMDREIIRLKIEQEALKKESDAGSKSRLQTLEKELVELEEKSASLTA 462
Query: 314 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 373
W EK + D+Q++K E++ +R+++ A R+ ++Q +L YG + +LER L D
Sbjct: 463 RWSAEKNKLSDAQKLKAELDGLRVELANAQRRGEFQKAGELAYGRIPELERQL-----AD 517
Query: 374 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 433
I+ N+ + +++ V + IA++VSR TG+PV K+++ E++KLL +E+ L KRVVGQ
Sbjct: 518 IEAKENSGE--MMEEAVTANHIAQVVSRWTGVPVDKMLEGEKDKLLKMEDSLGKRVVGQA 575
Query: 434 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 493
EA+ AV+ A+RRSR+GL D RP GSFMFLGPTGVGKTEL K L+ +FN+E +++R+DM
Sbjct: 576 EAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDM 635
Query: 494 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 553
SE++EKHS+SRLIGAPPGY+GY+EGG LTE VRR+PY ++L DEIEKA+ DVFN+LLQ+L
Sbjct: 636 SEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVL 695
Query: 554 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIYFRPEFI 612
DDGRLTD +GRT++FRNT+I+MTSNLGS+ + +G D ++ VM V+ +FRPEF+
Sbjct: 696 DDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQPEGEDTSAVREQVMGMVRGHFRPEFL 755
Query: 613 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 672
NR+D+II+F L R + I IQ L+ L + L + AA ++ G+D YGA
Sbjct: 756 NRVDEIILFHRLQRSEMGRIVEIQFARLQKLLTDRKIVLTLDGAARDWLAAKGWDPAYGA 815
Query: 673 RDVHGCKKSLSILLKKI---HKKSPEANFIFLGDL 704
R LK++ + + P A I GD+
Sbjct: 816 RP-----------LKRVIQRYLQDPLAEMILAGDV 839
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 338,706,470
Number of Sequences: 539616
Number of extensions: 14831073
Number of successful extensions: 69967
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 2045
Number of HSP's that attempted gapping in prelim test: 64551
Number of HSP's gapped (non-prelim): 5572
length of query: 938
length of database: 191,569,459
effective HSP length: 127
effective length of query: 811
effective length of database: 123,038,227
effective search space: 99784002097
effective search space used: 99784002097
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)