BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14504
(951 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|399020377|ref|ZP_10722510.1| ATP-dependent chaperone ClpB [Herbaspirillum sp. CF444]
gi|398095138|gb|EJL85485.1| ATP-dependent chaperone ClpB [Herbaspirillum sp. CF444]
Length = 863
Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/676 (70%), Positives = 594/676 (87%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ SQ+ E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 145 GGASVSSQEGEGQRESLKKYTLDLTERARNGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI++GEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVSGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 EIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKI+V+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKIIVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLTLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KLE +YA+LE+IWK EK ++ SQ +KEEIE++RL++++ATRKSDWQ VS+LKYG
Sbjct: 445 EEEIVKLEREYADLEEIWKSEKATVQGSQHLKEEIERIRLQMDEATRKSDWQKVSELKYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L+ +S++D N +K L++T+VG+EEIAEIV+R TGIPVS+++Q EREK
Sbjct: 505 KLAELEKALETQSKQDAASEQNVSKPRLVRTQVGAEEIAEIVARATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E +L +RVVGQDEAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCK L
Sbjct: 565 LLHMEEVLHQRVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME D ++K+
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQAMEDSDPAVVKM 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EV+++FRPEFINR+D+I+VF L+ KNI +IA IQL+IL+ +L +M++ L IS A
Sbjct: 745 AVMAEVRLHFRPEFINRVDEIVVFHALDEKNIGAIAKIQLHILEERLARMDIGLVISDAG 804
Query: 671 LKKISNIGFDLIYGAR 686
L+KI+ GFD +YGAR
Sbjct: 805 LQKIAEAGFDPVYGAR 820
>gi|398835100|ref|ZP_10592480.1| ATP-dependent chaperone ClpB, partial [Herbaspirillum sp. YR522]
gi|398218198|gb|EJN04711.1| ATP-dependent chaperone ClpB, partial [Herbaspirillum sp. YR522]
Length = 794
Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/676 (70%), Positives = 591/676 (87%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ SQQDE LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 76 GGASVSSQQDEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 135
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 136 IGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKSVLK 195
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 196 EIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 255
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 256 KDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDR 315
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI
Sbjct: 316 FLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQLI 375
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+LE+IWK EK+ + QQ++EEIEK+R+++ +ATRKSDWQ VS+LKYG
Sbjct: 376 EEEIARLDREYADLEEIWKAEKSTAQGGQQLREEIEKLRIQMEEATRKSDWQKVSELKYG 435
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L+ +++KD K L++T+VG+EEIAEIV+R TGIPVS+++Q EREK
Sbjct: 436 KLAELEAALEVQNKKDA-AGVTGEKPRLVRTQVGAEEIAEIVARATGIPVSRMMQGEREK 494
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E +L +RVVGQDEAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCKTL
Sbjct: 495 LLHMEEVLHERVVGQDEAIIAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKTL 554
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+IIRIDMSEF+EKHS++RLIGAPPGY+GYEEGG+LTE VRRKPYS+ILLDE
Sbjct: 555 ASYLFDTEEAIIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGHLTEAVRRKPYSVILLDE 614
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME D ++KL
Sbjct: 615 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEGSDPALVKL 674
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EV+ +FRPEFINR+D+++VF L+ KNI +IA IQL IL+ +L ++ + L+IS AA
Sbjct: 675 AVMAEVRTHFRPEFINRVDELVVFHALDEKNIGAIARIQLRILEQRLARLEIGLEISDAA 734
Query: 671 LKKISNIGFDLIYGAR 686
L+KI+ GFD +YGAR
Sbjct: 735 LQKIAEAGFDPVYGAR 750
>gi|340787492|ref|YP_004752957.1| ClpB protein [Collimonas fungivorans Ter331]
gi|340552759|gb|AEK62134.1| ClpB protein [Collimonas fungivorans Ter331]
Length = 867
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/679 (70%), Positives = 589/679 (86%), Gaps = 3/679 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ SQ E LKKYT+DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 145 GGANVASQDGEGQREALKKYTLDLTERARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKFRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 EIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE+MDKL+RRLIQLKIE EA++RE DE+S+KR LI
Sbjct: 385 FLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLDRRLIQLKIEREAVRREKDEASQKRFSLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL +YA+LE+IWK EK + S+ +KEEIEK+RL+I++ATR SDWQ VS+LKYG
Sbjct: 445 EEEIEKLSREYADLEEIWKSEKASAQGSKHLKEEIEKLRLQIDEATRNSDWQKVSELKYG 504
Query: 371 ELNKLERILKEKSQKD---IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+LN+LE+ L+ +S++D P+ + L++T+VG++EIAEIVSR TGIPVSK++Q E
Sbjct: 505 KLNELEKALETQSRQDALAAAHPDPDGRPQLVRTQVGADEIAEIVSRATGIPVSKMLQGE 564
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KL+ +E+ L KRVVGQ+EAI AVS+AIRRSR+GLSD RPYGSFMFLGPTGVGKTELC
Sbjct: 565 RDKLVKMEDELHKRVVGQNEAIVAVSDAIRRSRAGLSDPDRPYGSFMFLGPTGVGKTELC 624
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRRKPYS+IL
Sbjct: 625 KALAGFLFDSTDALIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRKPYSVIL 684
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
LDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS +I+ ME D +
Sbjct: 685 LDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHRIQAMEGSDPAV 744
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
+K+ VM EV+ +FRPEFINRID+I+VF L+ KNI SIA IQL IL+ +L KM+M L IS
Sbjct: 745 VKMEVMAEVRNHFRPEFINRIDEIVVFHALDEKNIGSIAKIQLKILEQRLAKMDMGLVIS 804
Query: 668 KAALKKISNIGFDLIYGAR 686
+A L+KI+ GFD +YGAR
Sbjct: 805 EAGLQKIAEAGFDPVYGAR 823
>gi|409405922|ref|ZP_11254384.1| ATP-dependent Clp protease subunit [Herbaspirillum sp. GW103]
gi|386434471|gb|EIJ47296.1| ATP-dependent Clp protease subunit [Herbaspirillum sp. GW103]
Length = 862
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/676 (71%), Positives = 592/676 (87%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ SQQDE LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 145 GGASVSSQQDEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 EIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KLE +YA+LE+IWK EK+ + QQ+KEEIEKVRL++ +ATRKSDWQ VS+LKYG
Sbjct: 445 EEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSELKYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L+ +++KD N K L++T+VG+EEIAEIV+R TGIPVS+++Q EREK
Sbjct: 505 KLAELEAALEVQNKKDAAGVKN-EKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E++L +RVVGQDEAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCK L
Sbjct: 564 LLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKAL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 624 ASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME D ++KL
Sbjct: 684 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEDSDPALVKL 743
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EV+ +FRPEFINR+D+I+VF L+ KNI +IA IQL IL+ +L K+ + L+IS+A
Sbjct: 744 AVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLEISEAG 803
Query: 671 LKKISNIGFDLIYGAR 686
L+KI+ GFD +YGAR
Sbjct: 804 LQKIAEAGFDPVYGAR 819
>gi|300311426|ref|YP_003775518.1| ATP-dependent Clp protease subunit [Herbaspirillum seropedicae
SmR1]
gi|300074211|gb|ADJ63610.1| ATP-dependent Clp protease subunit (heat-shock) protein
[Herbaspirillum seropedicae SmR1]
Length = 861
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/676 (71%), Positives = 591/676 (87%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ SQQDE LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 145 GGASVSSQQDEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 EIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KLE +YA+LE+IWK EK+ + QQ+KEEIEKVRL++ +ATRKSDWQ VS+LKYG
Sbjct: 445 EEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSELKYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L+ +++KD K L++T+VG+EEIAEIV+R TGIPVS+++Q EREK
Sbjct: 505 KLAELEAALEVQNKKDA-AGVKTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E++L +RVVGQDEAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCK L
Sbjct: 564 LLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKAL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 624 ASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME D ++KL
Sbjct: 684 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEDSDPALVKL 743
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EV+ +FRPEFINR+D+I+VF L+ KNI +IA IQL IL+ +L K+ + L+IS+A
Sbjct: 744 AVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLEISEAG 803
Query: 671 LKKISNIGFDLIYGAR 686
L+KI+ GFD +YGAR
Sbjct: 804 LQKIAEAGFDPVYGAR 819
>gi|415902608|ref|ZP_11552111.1| Heat-shock protein, ATP-dependent Clp protease subunit
[Herbaspirillum frisingense GSF30]
gi|407763849|gb|EKF72441.1| Heat-shock protein, ATP-dependent Clp protease subunit
[Herbaspirillum frisingense GSF30]
Length = 852
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/676 (70%), Positives = 591/676 (87%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ SQQDE LKK+T+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 136 GGASVSSQQDEGQREALKKFTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 195
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 196 IGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLK 255
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 256 EIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 315
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 316 KDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDR 375
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI
Sbjct: 376 FLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQLI 435
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KLE +YA+LE+IWK EK+ + QQ+KEEIEKVRL++ +ATRKSDWQ VS+LKYG
Sbjct: 436 EEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSELKYG 495
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L+ +++KD K L++T+VG+EEIAEIV+R TGIPVS+++Q EREK
Sbjct: 496 KLAELEAALEVQNKKDA-AGATTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREK 554
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E++L +RVVGQ+EAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCK L
Sbjct: 555 LLHMEDVLHERVVGQEEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKAL 614
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 615 ASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 674
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS +I+ ME D ++KL
Sbjct: 675 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHRIQSMEDSDPALVKL 734
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EV+ +FRPEFINR+D+I+VF L+ KNI +IA IQL IL+ +L K+ + L+IS+A
Sbjct: 735 AVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLQISEAG 794
Query: 671 LKKISNIGFDLIYGAR 686
L+KI+ GFD +YGAR
Sbjct: 795 LQKIAEAGFDPVYGAR 810
>gi|124483534|emb|CAM32640.1| ATP-dependent Clp protease subunit (heat-shock) protein
[Herbaspirillum seropedicae]
Length = 861
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/676 (71%), Positives = 589/676 (87%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ SQQDE LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 145 GGASVSSQQDEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ ++ I+FIDELHTM+G G EG++DAGNMLKP L+R ELHC+GATTL+EYRQYIE
Sbjct: 265 EIAQDEGQTIVFIDELHTMVGAGYAEGAMDAGNMLKPALARAELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KLE +YA+LE+IWK EK+ + QQ+KEEIEKVRL++ +ATRKSDWQ VS+LKYG
Sbjct: 445 EEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSELKYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L+ +++KD K L++T+VG+EEIAEIV+R TGIPVS+++Q EREK
Sbjct: 505 KLAELEAALEVQNKKDA-AGVKTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E++L +RVVGQDEAI AVS+AIRRSR+GL D +PYGSFMFLGPTGVGKTELCK L
Sbjct: 564 LLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKAL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 624 ASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME D ++KL
Sbjct: 684 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEDSDPALVKL 743
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EV+ +FRPEFINR+D+I+VF L+ KNI +IA IQL IL+ +L K+ + L+IS+A
Sbjct: 744 AVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLEISEAG 803
Query: 671 LKKISNIGFDLIYGAR 686
L+KI+ GFD +YGAR
Sbjct: 804 LQKIAEAGFDPVYGAR 819
>gi|329912608|ref|ZP_08275778.1| ClpB protein [Oxalobacteraceae bacterium IMCC9480]
gi|327545580|gb|EGF30751.1| ClpB protein [Oxalobacteraceae bacterium IMCC9480]
Length = 867
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/676 (68%), Positives = 587/676 (86%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ S E L KYTIDLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGASVNSADSEGQREALAKYTIDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A L+AG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALVAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 DLAKDEGQTIVFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ++YEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKILVAEPSVEATIAILRGLQERYEVHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAK+KIEIDS+PE+MDKL+RR IQLKIE EAIK+E DE+S++RL LI
Sbjct: 385 FLPDKAIDLIDEAAAKVKIEIDSRPEVMDKLDRRTIQLKIEREAIKKEKDEASQRRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +YA+LE+IW+ EK ++ SQ IKEEIE+VRL++++ATRKSDW+TVS+L+YG
Sbjct: 445 EEEILRSEREYADLEEIWRAEKAAVQGSQHIKEEIEEVRLQMDEATRKSDWKTVSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L+ +S++D Q K LL+T+VG+EEIAEIVSR TGIPVSK++Q ER+K
Sbjct: 505 KLPELEKALEAQSRQDEQADKANTKPRLLRTQVGAEEIAEIVSRATGIPVSKMMQGERDK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+++E+ L +RV+GQ EAI AVS+AIRRSR+GLSD RPYGSFMFLGPTGVGKTELCK L
Sbjct: 565 LVHMEDFLHQRVIGQHEAIVAVSDAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EES+IRIDMSEF+EKHS++RLIGAPPGY+GY+EGG+LTE VRR+PYS+ILLDE
Sbjct: 625 AGFLFDTEESMIRIDMSEFMEKHSVARLIGAPPGYVGYDEGGFLTEAVRRRPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME+ + ++K+
Sbjct: 685 VEKAHQDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQAMEESEPAVVKM 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EV+ +FRPEFINRID+I+VF L+ K+I +IA IQL IL+ +L KM M L I+ AA
Sbjct: 745 AVMAEVRQHFRPEFINRIDEIVVFHALDEKHIGAIARIQLKILEQRLGKMEMRLDITDAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+KI+ GFD +YGAR
Sbjct: 805 LQKIAEAGFDPVYGAR 820
>gi|253995931|ref|YP_003047995.1| ATP-dependent chaperone ClpB [Methylotenera mobilis JLW8]
gi|253982610|gb|ACT47468.1| ATP-dependent chaperone ClpB [Methylotenera mobilis JLW8]
Length = 863
Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/723 (65%), Positives = 594/723 (82%), Gaps = 12/723 (1%)
Query: 13 KNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIG 72
+N+ SQ+ E LKKYTIDLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIG
Sbjct: 147 ENVDSQEAEGQRESLKKYTIDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIG 206
Query: 73 EPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEI 132
EPGVGKTAIVEGLAQRI+NGEVP SL KK+L LD+A LLAG KYRGEFE+RLK +LKE+
Sbjct: 207 EPGVGKTAIVEGLAQRIVNGEVPESLKGKKVLSLDMAALLAGAKYRGEFEERLKSVLKEL 266
Query: 133 SNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKD 192
+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKD
Sbjct: 267 AQDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKD 326
Query: 193 AAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFM 252
AA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DRF+
Sbjct: 327 AALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFL 386
Query: 253 PDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKK 312
PDKAIDLIDEAA++IK+EIDSKPE+MDKLERRLIQLKIE EA++RE DE SKKR LI+
Sbjct: 387 PDKAIDLIDEAASRIKMEIDSKPEVMDKLERRLIQLKIEREAVRREKDEGSKKRFELIED 446
Query: 313 EINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGEL 372
EI+KLE +YA+LE+IWK EK ++ S IKE IEKV+ ++ +ATRK DWQ VS+L+YG+L
Sbjct: 447 EISKLEKEYADLEEIWKSEKAQVQGSAHIKEAIEKVKFEMEEATRKGDWQKVSELQYGKL 506
Query: 373 NKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLL 432
+LE LK+ S ++ + + +K +L+T+VG++EIAE+VSR TGIPVSK++ EREKLL
Sbjct: 507 PQLETQLKQASTAEVSV--DLSKHKMLRTEVGADEIAEVVSRATGIPVSKMMTGEREKLL 564
Query: 433 NIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSA 492
+E L +RVVGQDEA+ VS+AIRRSRSGL D RPYGSF+FLGPTGVGKTELCK+L+
Sbjct: 565 TMEAKLHERVVGQDEAVRLVSDAIRRSRSGLGDPNRPYGSFLFLGPTGVGKTELCKSLAN 624
Query: 493 CIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIE 552
+F++EE +IRIDMSEF+EKHS++R+IGAPPGY+GYEEGG LTE VRRKPYS+ILLDE+E
Sbjct: 625 FLFDSEEHLIRIDMSEFMEKHSVARMIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVE 684
Query: 553 KANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAV 612
KA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS I+ M D +++KLAV
Sbjct: 685 KAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMSDQDYQLVKLAV 744
Query: 613 MNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALK 672
M EVK +FRPEF+NRID+++VF L +NI SIA IQL L +L M+M L+++ AA+
Sbjct: 745 MGEVKTHFRPEFVNRIDEVVVFHALGEENIKSIAAIQLQYLAKRLAAMDMQLELTDAAIA 804
Query: 673 KISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTL--RM 730
+I+N GFD +YGAR + +S ++P A I G+ I K +D ++
Sbjct: 805 EIANAGFDPVYGARPLKRAIQS--------EIENPLAREILAGNFIAKDTVKIDVRAGKL 856
Query: 731 VYS 733
V+S
Sbjct: 857 VFS 859
>gi|82702670|ref|YP_412236.1| ATPase with chaperone activity [Nitrosospira multiformis ATCC
25196]
gi|82410735|gb|ABB74844.1| ATPase with chaperone activity [Nitrosospira multiformis ATCC
25196]
Length = 869
Score = 982 bits (2539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/676 (67%), Positives = 576/676 (85%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + + E LKKYT+DLTE+AR GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 145 GGENVSNPEAEASREALKKYTLDLTERARAGKLDPVIGRDDEIRRTVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L KK+L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKDKKVLSLDMAALLAGAKYRGEFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ +I+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 EIAQAGGSVIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ VEEP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVEEPTVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL L+
Sbjct: 385 FLPDKAIDLIDEAAARIRMEIDSKPEAMDRLDRRLIQLKIEREAVKKEKDEASQKRLALL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI KLE +YA+LE+IWK EK+ ++ +Q IKEE+EKV+L+I ATRK DWQ VS+L+YG
Sbjct: 445 EDEIAKLEREYADLEEIWKAEKSQVQGTQHIKEEMEKVKLEIEAATRKGDWQKVSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE L+ + ++ + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 505 RLPQLEAQLQMQDRQAEKETVEQNKPKLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L +RVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELC+ L
Sbjct: 565 LLHMEEKLHERVVGQDEAVRLVSDAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCRAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY++ILLDE
Sbjct: 625 AGFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYAVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKL
Sbjct: 685 VEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGDDYQVIKL 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK YFRPEFINRID+++VF L+ K+I SIA IQL L+ +L K+ M LK++ AA
Sbjct: 745 AVMGEVKAYFRPEFINRIDEVVVFHALDEKHIKSIARIQLQQLERRLAKLEMHLKVTDAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L +++ GFD ++GAR
Sbjct: 805 LAEVAQAGFDPVFGAR 820
>gi|152979798|ref|YP_001353008.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Janthinobacterium sp. Marseille]
gi|151279875|gb|ABR88285.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Janthinobacterium sp. Marseille]
Length = 859
Score = 980 bits (2533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/660 (69%), Positives = 572/660 (86%), Gaps = 4/660 (0%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
LKKYT+DLTE+AR+GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARIGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP+SL K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPDSLKGKRVLSLDMASLLAGAKYRGEFEERLKAVLTELAEDEGQTIVFIDEM 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HT++G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKI+V E
Sbjct: 281 HTLVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVAE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAA+K
Sbjct: 341 PTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASK 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
IKIE+DSKPE+MDKL+RR+IQLKIE EAIK+E DE+S+KRL LI++EI +L +YA+LE+
Sbjct: 401 IKIELDSKPEVMDKLDRRVIQLKIEREAIKKEKDEASQKRLALIEEEIERLGREYADLEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK+ + SQ IKEEIEKVRL++ +ATRKSDWQ VS+L+Y L +LE LK + +
Sbjct: 461 IWKAEKSSAQGSQHIKEEIEKVRLQMEEATRKSDWQRVSELQYSTLPQLEAQLKNAVKGE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ +A K L++T+VG+EEIAE+VSR TGIPVS+++ EREKLL +E+ L KRVVGQ
Sbjct: 521 V----SAGKPQLVRTQVGAEEIAEVVSRATGIPVSRMMTGEREKLLQMEDALHKRVVGQH 576
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EAI AVS+AIRRSR+GL D RPYGSFMFLGPTGVGKTELCK L++ +F+ E+S+IRIDM
Sbjct: 577 EAIVAVSDAIRRSRAGLGDPDRPYGSFMFLGPTGVGKTELCKALASFMFDTEDSLIRIDM 636
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY +ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVILLDEIEKAHPDVFNVLLQVL 696
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 626
DDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME + +IK+AVM EV+ +FRPEFIN
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEGNEPALIKMAVMAEVQGHFRPEFIN 756
Query: 627 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
RID+I+ F L+ KNI SIA IQL +L+ +L +M+M + +S+ AL+KI+ GFD +YGAR
Sbjct: 757 RIDEIVAFHALDEKNIGSIAKIQLQVLEKRLARMDMSMDVSEDALQKIAEAGFDPVYGAR 816
>gi|134095329|ref|YP_001100404.1| ATP-dependent protease Hsp 100 [Herminiimonas arsenicoxydans]
gi|133739232|emb|CAL62281.1| Chaperone protein ClpB [Herminiimonas arsenicoxydans]
Length = 860
Score = 976 bits (2523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/660 (69%), Positives = 569/660 (86%), Gaps = 4/660 (0%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
LKKYT+DLTE+AR+GKLDPVIGRDDEIRR IQ+LQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTMDLTERARIGKLDPVIGRDDEIRRTIQILQRRSKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP SL K++L LD+A LLAG KYRGEFE+RLK +L E++ ++ I+FIDE+
Sbjct: 221 QRIVNGEVPESLKGKRVLSLDMASLLAGAKYRGEFEERLKAVLTELAEDEGQTIVFIDEM 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HT++G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTLVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 341 PTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
IKIEIDSKPE+MD+L+RR+IQLKIE EAI++E DE+S+KRL LI++EI KL +YA+LE+
Sbjct: 401 IKIEIDSKPEVMDRLDRRVIQLKIEREAIRKEKDEASQKRLALIEEEIEKLGREYADLEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK+ + SQ IKE IEK RL++ +ATR+SDWQ VS+L+Y L +LE LK
Sbjct: 461 IWKAEKSAAQGSQHIKEAIEKARLQMEEATRQSDWQRVSELQYKTLPELEAQLKNA---- 516
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ +A K L++T+VG+EEIAE+VSR TGIPVS+++Q EREKLL +E+ L KRVVGQ
Sbjct: 517 VTGEASAGKPQLVRTQVGAEEIAEVVSRATGIPVSRMMQGEREKLLQMEDALHKRVVGQH 576
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EAI AVS+AIRRSR+GL D RPYGSFMFLGPTGVGKTELCK L++ +F+ E+S++RIDM
Sbjct: 577 EAIVAVSDAIRRSRAGLGDPDRPYGSFMFLGPTGVGKTELCKALASFLFDTEDSLVRIDM 636
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY +ILLDEIEKA+ DVFN+LLQ+L
Sbjct: 637 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVILLDEIEKAHPDVFNVLLQVL 696
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 626
DDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME + +IK+AVM EV+ +FRPEFIN
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQAMEGNEPALIKMAVMAEVQSHFRPEFIN 756
Query: 627 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
RID+I+VF L+ KNI +IA IQL+ L+ +L +M+M + +S+ AL+KI+ GFD +YGAR
Sbjct: 757 RIDEIVVFHALDEKNIGAIAKIQLHTLEQRLARMDMSMDVSEDALQKIAEAGFDPVYGAR 816
>gi|339482101|ref|YP_004693887.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. Is79A3]
gi|338804246|gb|AEJ00488.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. Is79A3]
Length = 871
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/681 (68%), Positives = 573/681 (84%), Gaps = 5/681 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGEQISSAEAEGSREALKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP SL K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPESLKDKRVLSLDMAALLAGAKYRGEFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAQDEGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+I++EIDSKPE +DKL+RRLIQLKIE EAIK+E DE+S+KRL L+
Sbjct: 385 FLPDKAIDLIDEAAARIRMEIDSKPEALDKLDRRLIQLKIEREAIKKEKDEASQKRLQLL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +YA+L++IWK EK ++ SQQIKEE+EK+RL+I ATRK DWQ VS+L+YG
Sbjct: 445 EEEIKQKEREYADLDEIWKTEKFHVQGSQQIKEEMEKIRLEIEAATRKGDWQKVSELQYG 504
Query: 371 ELNKLERILK-----EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
L +LE L+ +K Q A LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 505 RLPQLEAQLQSQLNAQKQQTGATESGAAAAPKLLRTQVGAEEIAEVVSRATGIPVSKMMQ 564
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
EREKLL +E L RVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTE
Sbjct: 565 GEREKLLLMEQKLHDRVVGQDEAVRLVSDAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 624
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
LCK L+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTEIVRRKPY++
Sbjct: 625 LCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEIVRRKPYAV 684
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 605
ILLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+EM +
Sbjct: 685 ILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQEMSGSEY 744
Query: 606 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
+ IK AVM EVK +FRPEFINRID+++VF L+ K+I SIA IQL+ L+ +L K+ M L+
Sbjct: 745 QAIKEAVMGEVKTHFRPEFINRIDEVVVFHALDEKHIKSIARIQLHYLETRLAKLEMKLE 804
Query: 666 ISKAALKKISNIGFDLIYGAR 686
+S+AAL +S GFD +YGAR
Sbjct: 805 VSEAALAALSQAGFDPVYGAR 825
>gi|119897857|ref|YP_933070.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Azoarcus sp.
BH72]
gi|119670270|emb|CAL94183.1| probable ATP-dependent Clp protease, ATP-binding subunit ClpB
[Azoarcus sp. BH72]
Length = 860
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/676 (67%), Positives = 573/676 (84%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ SQ E LKKY +DLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 145 GGQNVGSQDAEGQREALKKYCLDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L KK+L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPETLKGKKVLSLDMAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAQDEGRIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTVESTIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE+MDKLERRLIQLKIE EA+KRE DE+S++RLLLI
Sbjct: 385 FLPDKAIDLIDEAAARIKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQRRLLLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI+KLE +YANL+++W+ EK ++ SQ IKEEIEK+R ++ + RK + +++L+YG
Sbjct: 445 RDEIDKLEREYANLDEVWRSEKASVQGSQHIKEEIEKLRAQMAEMQRKGQFDKLAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + +F LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 505 KLPQLEAQLKAAETAG----SGERQFKLLRTQVGAEEIAEVVSRATGIPVSKMMQGERDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCKTL
Sbjct: 561 LLKMEERLHGRVVGQDEAVRLVSDAIRRSRAGLADENRPYGSFLFLGPTGVGKTELCKTL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL DE
Sbjct: 621 AEFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKL
Sbjct: 681 VEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKL 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK +FRPEFINRID+++VF L+ KNI IA IQL L+ +L K++M +++S AA
Sbjct: 741 AVMAEVKTFFRPEFINRIDEVVVFHALDEKNIAGIARIQLKYLEKRLAKLDMSMEVSDAA 800
Query: 671 LKKISNIGFDLIYGAR 686
L +I++ GFD ++GAR
Sbjct: 801 LAEIASAGFDPVFGAR 816
>gi|394988952|ref|ZP_10381787.1| ATP-dependent chaperone ClpB [Sulfuricella denitrificans skB26]
gi|393792331|dbj|GAB71426.1| ATP-dependent chaperone ClpB [Sulfuricella denitrificans skB26]
Length = 870
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/660 (67%), Positives = 572/660 (86%), Gaps = 4/660 (0%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
LKKYT+DLTE+ARLGKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARLGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIINGEVP +L K++L+LD+A LLAG KYRGEFE+RLK +LKE+ + +I+FIDEL
Sbjct: 221 QRIINGEVPETLKGKRVLVLDMAGLLAGAKYRGEFEERLKAVLKEVGQEEGQVILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYVEKDAALERRFQKVLVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGLQ+KYE+HHGV+ITDPAI+AA+ELS+RYI+DRF+PDKAIDLIDEAA++
Sbjct: 341 PSVEDTIAILRGLQEKYELHHGVDITDPAIIAAAELSHRYITDRFLPDKAIDLIDEAASR 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDSKPE+MDKL+RRLIQLKIE EA+K+E DE+SKKRL+L+ +EI KL+ +Y +LE+
Sbjct: 401 IRMEIDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASKKRLVLLDQEIVKLQREYNDLEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK ++ SQ IKEE+++++++++ ATRK +WQ VS+++YG++ +LE LK D
Sbjct: 461 IWKAEKAQVQGSQHIKEELDRLKVEMDAATRKGEWQKVSEIQYGKIPQLEAQLKHADTAD 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+P + LL+T+VG+EEIAE+VSR TGIPVSK+++ ER+KLL++E+ L +RVVGQD
Sbjct: 521 EAMPAH----QLLRTQVGAEEIAEVVSRATGIPVSKMMEGERDKLLHMEDQLHQRVVGQD 576
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ VS+AIRRSR+GL D RPYGSF+FLGPTGVGKTELCK L+ +F++EE +IRIDM
Sbjct: 577 EAVRLVSDAIRRSRAGLGDPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM 636
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+E+HS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 637 SEFMERHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 696
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 626
DDGR+TD +GRT++F+NT+IVMTSNLGS I++ME D +++KLAVM EVK YFRPEFIN
Sbjct: 697 DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMEGDDYQVVKLAVMAEVKSYFRPEFIN 756
Query: 627 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
RID+++VF L+ +NI SIA IQL L +L M M L++S AAL +++ GFD ++GAR
Sbjct: 757 RIDEVVVFHALDEENIKSIAGIQLQYLTKRLAAMEMKLEVSDAALTELAAAGFDPVFGAR 816
>gi|291614661|ref|YP_003524818.1| ATP-dependent chaperone ClpB [Sideroxydans lithotrophicus ES-1]
gi|291584773|gb|ADE12431.1| ATP-dependent chaperone ClpB [Sideroxydans lithotrophicus ES-1]
Length = 861
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/676 (68%), Positives = 575/676 (85%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ SQ+ E LKKY +DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGESVGSQEAEGQREALKKYCMDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP +L K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 ELSQDEGKNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVESTIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RRLIQLKIE EA+K+E DE+S+KR+ LI
Sbjct: 385 FLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASRKRMGLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI KLE +YA+LE+IWK EK + + +KEEI+ V+ ++ R+ + V++L+YG
Sbjct: 445 EDEIRKLEREYADLEEIWKAEKGAAQGAANVKEEIDHVKAEMVALQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LKE +Q++ + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 505 KLPQLEAKLKEAAQREAEGTGTRNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCKTL
Sbjct: 563 LLKMEDKLHERVVGQDEAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKTL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 623 ANFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVF +LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++ME D +++KL
Sbjct: 683 VEKAHPDVFGVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMEGDDYQVVKL 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK YFRPEFINRID+++VF L+ KNI SIA IQL+ L+ +L M M L ++ AA
Sbjct: 743 AVMGEVKNYFRPEFINRIDEVVVFHALDEKNIKSIARIQLHGLEKRLAAMEMKLDVTDAA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +I+N GFD +YGAR
Sbjct: 803 LAEIANAGFDPVYGAR 818
>gi|56479246|ref|YP_160835.1| ClpB protein [Aromatoleum aromaticum EbN1]
gi|56315289|emb|CAI09934.1| ClpB protein [Aromatoleum aromaticum EbN1]
Length = 860
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/676 (67%), Positives = 569/676 (84%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E L KY +DLT++AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 145 GGSGVGSQDAEGQREALNKYCLDLTDRARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ + II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 EIAQEEGRIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVESTIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE+MDKLERRLIQLKIE EA+KRE DE+S+KRL+LI
Sbjct: 385 FLPDKAIDLIDEAAARIKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQKRLVLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI+KLE +YANL++IW+ EK ++ SQ IKEEIE +R ++ + RK + +++L+YG
Sbjct: 445 RDEIDKLEREYANLDEIWRSEKASVQGSQHIKEEIEALRTQMAEMQRKGQYDKLAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + KF LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 505 KLPQLEAQLKAAESAG----SGERKFKLLRTEVGTEEIAEVVSRATGIPVSKMMQGEREK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEA+ V++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCKTL
Sbjct: 561 LLKMEERLHQRVVGQDEAVRLVADAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKTL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL DE
Sbjct: 621 AEFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKL
Sbjct: 681 VEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGDDHQVIKL 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK YFRPEF+NRID+++VF L+ K+I SIA IQL L +L +++M +++S AA
Sbjct: 741 AVMAEVKTYFRPEFVNRIDEVVVFHALDEKHIASIARIQLQYLDKRLARLDMSMEVSDAA 800
Query: 671 LKKISNIGFDLIYGAR 686
L ++++ GFD ++GAR
Sbjct: 801 LAELASAGFDPVFGAR 816
>gi|91776550|ref|YP_546306.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
gi|91710537|gb|ABE50465.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
Length = 861
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/670 (68%), Positives = 572/670 (85%), Gaps = 2/670 (0%)
Query: 17 SQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGV 76
SQ+ E + LKK+TIDLTE+ARLGKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGV
Sbjct: 151 SQEAESNREALKKFTIDLTERARLGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGV 210
Query: 77 GKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQ 136
GKTAIVEGLAQRI+NGEVP +L +K++L+LD+A LLAG KYRGEFE+RL+ +LKE++ ++
Sbjct: 211 GKTAIVEGLAQRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLQAVLKELAQDE 270
Query: 137 KDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFE 196
I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA E
Sbjct: 271 GKTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALE 330
Query: 197 RRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKA 256
RRFQK+LV+EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DRF+PDKA
Sbjct: 331 RRFQKVLVDEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDRFLPDKA 390
Query: 257 IDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINK 316
IDLIDEAAA+IK+EIDSKPE +DKLERRLIQLKIE EA+ RE DE+S+KRL LI+ EI +
Sbjct: 391 IDLIDEAAARIKMEIDSKPEALDKLERRLIQLKIEREAVHREKDEASQKRLSLIEDEIRR 450
Query: 317 LEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE 376
LE +YA+LE+IWK EK ++ S+ +KEEIEKV+L+I +ATRK +WQ VS+L+YG+L +LE
Sbjct: 451 LEKEYADLEEIWKAEKAQVQGSKHLKEEIEKVKLQIEEATRKGEWQKVSELQYGKLPQLE 510
Query: 377 RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIEN 436
LK+ + + Q ++ LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+KLL++E
Sbjct: 511 TQLKQAASAEEQGGQKPHR--LLRTQVGAEEIAEVVSRATGIPVSKMLQGERDKLLHMEE 568
Query: 437 LLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFN 496
L +RVVGQDEA+ VS+AIRRSRSGL+D RPYGSF+FLGPTGVGKTEL K L+ +F+
Sbjct: 569 KLHERVVGQDEAVRLVSDAIRRSRSGLADPNRPYGSFLFLGPTGVGKTELTKALAGFLFD 628
Query: 497 NEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANS 556
+E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+
Sbjct: 629 SEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHP 688
Query: 557 DVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEV 616
DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS I+ M + +++KLAVM EV
Sbjct: 689 DVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQNMSGDEYQVVKLAVMAEV 748
Query: 617 KIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISN 676
K FRPEF+NRID+++VF L ++ SIA IQL L +L M M L +S AAL +I+N
Sbjct: 749 KANFRPEFVNRIDEVVVFHALGESHVKSIARIQLQNLAKRLAAMEMHLDVSDAALAEIAN 808
Query: 677 IGFDLIYGAR 686
GFD +YGAR
Sbjct: 809 AGFDPVYGAR 818
>gi|206560283|ref|YP_002231047.1| ClpB heat-shock protein [Burkholderia cenocepacia J2315]
gi|444358706|ref|ZP_21160085.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia BC7]
gi|444365745|ref|ZP_21165861.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia
K56-2Valvano]
gi|198036324|emb|CAR52220.1| ClpB heat-shock protein [Burkholderia cenocepacia J2315]
gi|443603407|gb|ELT71418.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia BC7]
gi|443605667|gb|ELT73504.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia
K56-2Valvano]
Length = 865
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/676 (67%), Positives = 574/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREK
Sbjct: 505 KLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKAN DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK
Sbjct: 685 IEKANPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGSPQDEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPVFGAR 820
>gi|107028974|ref|YP_626069.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]
gi|116689868|ref|YP_835491.1| ATPase [Burkholderia cenocepacia HI2424]
gi|105898138|gb|ABF81096.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]
gi|116647957|gb|ABK08598.1| ATPase AAA-2 domain protein [Burkholderia cenocepacia HI2424]
Length = 865
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/676 (67%), Positives = 575/676 (85%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI++L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREK
Sbjct: 505 KLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQDEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPVFGAR 820
>gi|115351836|ref|YP_773675.1| ATPase [Burkholderia ambifaria AMMD]
gi|172060806|ref|YP_001808458.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MC40-6]
gi|115281824|gb|ABI87341.1| ATPase AAA-2 domain protein [Burkholderia ambifaria AMMD]
gi|171993323|gb|ACB64242.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MC40-6]
Length = 865
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/676 (67%), Positives = 574/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI++L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPVFGAR 820
>gi|421866946|ref|ZP_16298608.1| ClpB protein [Burkholderia cenocepacia H111]
gi|358073110|emb|CCE49486.1| ClpB protein [Burkholderia cenocepacia H111]
Length = 865
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/676 (67%), Positives = 574/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREK
Sbjct: 505 KLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGSPQDEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPVFGAR 820
>gi|413962472|ref|ZP_11401699.1| ATP-dependent chaperone ClpB [Burkholderia sp. SJ98]
gi|413928304|gb|EKS67592.1| ATP-dependent chaperone ClpB [Burkholderia sp. SJ98]
Length = 865
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/676 (67%), Positives = 572/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGAQVNSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLH 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI++L +Y++LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIDRLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q NN + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREK
Sbjct: 505 KLPELEARLKQVTQAESQEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE L +RV+GQDEAI AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIEAKLHERVIGQDEAIGAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AAFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQGMVGEPQERVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++MDL +S AA
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRTNIESIAKIQLARLHERLAKLDMDLDVSDAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L +I +G+D ++GAR
Sbjct: 805 LAQIGKVGYDPLFGAR 820
>gi|170703405|ref|ZP_02894181.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria IOP40-10]
gi|170131681|gb|EDT00233.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria IOP40-10]
Length = 865
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/676 (67%), Positives = 574/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI++L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPVFGAR 820
>gi|170733207|ref|YP_001765154.1| ATP-dependent chaperone ClpB [Burkholderia cenocepacia MC0-3]
gi|169816449|gb|ACA91032.1| ATP-dependent chaperone ClpB [Burkholderia cenocepacia MC0-3]
Length = 865
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/676 (67%), Positives = 575/676 (85%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI++L +YA+LE+IW EK ++ S Q+KE+IEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEDIEKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREK
Sbjct: 505 KLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQDEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPVFGAR 820
>gi|297537752|ref|YP_003673521.1| ATP-dependent chaperone ClpB [Methylotenera versatilis 301]
gi|297257099|gb|ADI28944.1| ATP-dependent chaperone ClpB [Methylotenera versatilis 301]
Length = 863
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/676 (66%), Positives = 565/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E + LKKYT+DLTE+AR+GKLDPVIGRDDEIRR IQ+L RR+KNNPVL
Sbjct: 145 GGEQVNESDAESNREALKKYTLDLTERARMGKLDPVIGRDDEIRRTIQILGRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+SL KK+L LD+A LLAG KYRG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDSLKGKKVLSLDMAALLAGAKYRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAQDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE+MDKLERR+IQLKIE EA++RE DE SKKR LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMEIDSKPEVMDKLERRMIQLKIEREAVRREKDEGSKKRFNLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E +LE +YA+LE IWK EK ++ S IKEEIEK++ ++ +ATRK +WQ VS+L+YG
Sbjct: 445 EEEFGRLEKEYADLEDIWKAEKAQVQGSAHIKEEIEKIKFEMEEATRKGEWQKVSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LK+ S + + K +L+T+VG++EIAE+VSR TGIPVSK++Q ER K
Sbjct: 505 KLPALEAQLKQASNS--EATSTQTKHKMLRTEVGADEIAEVVSRATGIPVSKMMQGERGK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEA+ VS+AIRRSRSGL D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 563 LLTMETKLHERVVGQDEAVRLVSDAIRRSRSGLGDPNRPYGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++R+IGAPPGY+GYEEGG LTE VRRKPYS+ILLDE
Sbjct: 623 AGFLFDSEDHLIRIDMSEFMEKHSVARMIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS I+ M D +++KL
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMADQDYQVVKL 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK +FRPEF+NRID+++VF L NI +IA IQL L +L M+M L+++ AA
Sbjct: 743 AVMGEVKAHFRPEFVNRIDEVVVFHALGEDNIKAIAEIQLQYLAKRLAAMDMQLELTDAA 802
Query: 671 LKKISNIGFDLIYGAR 686
+ +I+N GFD +YGAR
Sbjct: 803 ITEIANAGFDPVYGAR 818
>gi|254248039|ref|ZP_04941360.1| ATPase with chaperone activity, ATP-binding subunit [Burkholderia
cenocepacia PC184]
gi|124872815|gb|EAY64531.1| ATPase with chaperone activity, ATP-binding subunit [Burkholderia
cenocepacia PC184]
Length = 865
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/676 (67%), Positives = 575/676 (85%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI++L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +L+ LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREK
Sbjct: 505 KLPQLDAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQDEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPVFGAR 820
>gi|171317872|ref|ZP_02907049.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MEX-5]
gi|171096941|gb|EDT41811.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MEX-5]
Length = 865
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/676 (67%), Positives = 573/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI++L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLERVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ EAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQHEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPVFGAR 820
>gi|170692320|ref|ZP_02883483.1| ATP-dependent chaperone ClpB [Burkholderia graminis C4D1M]
gi|170142750|gb|EDT10915.1| ATP-dependent chaperone ClpB [Burkholderia graminis C4D1M]
Length = 865
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/676 (66%), Positives = 572/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +Y++LE+IW EK ++ S Q+KEEI+K R +I + R+ + V++L+YG
Sbjct: 445 EEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIDKTRAEITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LKE +Q + + NN + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREK
Sbjct: 505 KLPGLEAQLKEVTQAEAKEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE+ L +RV+GQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIEDKLHERVIGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AAFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQEAVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R N+ SIA IQL L ++L K++M L +S A
Sbjct: 745 AVWTEVKLHFRPEFLNRIDDVVVFHALDRSNVQSIARIQLQRLHDRLAKLDMQLVVSDEA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+ + +G+D ++GAR
Sbjct: 805 LEHVGKVGYDPLFGAR 820
>gi|377821024|ref|YP_004977395.1| ATP-dependent chaperone ClpB [Burkholderia sp. YI23]
gi|357935859|gb|AET89418.1| ATP-dependent chaperone ClpB [Burkholderia sp. YI23]
Length = 865
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/676 (66%), Positives = 573/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G I SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGAQIDSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGMTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +Y++LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPELEARLKQVTQAESQEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE+ L +RV+GQDEAI AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIESKLHERVIGQDEAIGAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AAFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQGMIGEPQESVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M+ ++S AA
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRSNISAIAKIQLQRLHDRLAKLDMEFEVSDAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPVFGAR 820
>gi|402566351|ref|YP_006615696.1| ClpB protein [Burkholderia cepacia GG4]
gi|402247548|gb|AFQ48002.1| ClpB protein [Burkholderia cepacia GG4]
Length = 865
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/676 (67%), Positives = 572/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ EAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQHEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGSPQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPVFGAR 820
>gi|358636852|dbj|BAL24149.1| ClpB protein [Azoarcus sp. KH32C]
Length = 859
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/676 (67%), Positives = 568/676 (84%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E L KY IDLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 145 GGAGVASQDAEGQREALTKYCIDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNAEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ + II+FIDE+HTM+G GK EG+IDAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 EIAQEEGQIIVFIDEIHTMVGAGKAEGAIDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVESTIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE+MDKLERRLIQLKIE EA+KRE DE+S+KRL+LI
Sbjct: 385 FLPDKAIDLIDEAAARIKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQKRLVLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI KLE +YANL++IW+ EK ++ SQ IKEEI+K+R ++ + RK + +++L+YG
Sbjct: 445 RDEIEKLEREYANLDEIWRSEKASVQGSQHIKEEIDKLRAQMAEMQRKGQYDKLAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + KF LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 505 KLPQLEAQLKVAEEAG----SGERKFKLLRTQVGTEEIAEVVSRATGIPVSKMMQGEREK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQDEA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 561 LLRMEERLHSRVVGQDEAVRLVSDAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL DE
Sbjct: 621 AEFLFDSEEHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKL
Sbjct: 681 VEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKL 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK +FRPEF+NRID+++VF L+ K+I SIA IQL L+ +L +++M L+++ AA
Sbjct: 741 AVMAEVKTFFRPEFVNRIDEVVVFHALDEKHIASIARIQLQYLERRLARLDMTLQVTDAA 800
Query: 671 LKKISNIGFDLIYGAR 686
L +++ GFD I+GAR
Sbjct: 801 LAELAAAGFDPIFGAR 816
>gi|134295878|ref|YP_001119613.1| ATPase [Burkholderia vietnamiensis G4]
gi|134139035|gb|ABO54778.1| ATPase AAA-2 domain protein [Burkholderia vietnamiensis G4]
Length = 865
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/676 (67%), Positives = 571/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q + + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLESQLKQVTQAEAQEQHAPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ + +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSLTGSPQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPLFGAR 820
>gi|78066617|ref|YP_369386.1| ATPase AAA [Burkholderia sp. 383]
gi|77967362|gb|ABB08742.1| AAA ATPase, ClpB [Burkholderia sp. 383]
Length = 865
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/676 (67%), Positives = 572/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQRDGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREK
Sbjct: 505 KLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ EAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQHEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S+AA
Sbjct: 745 AVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSEAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPLFGAR 820
>gi|221198117|ref|ZP_03571163.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M]
gi|221208392|ref|ZP_03581395.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2]
gi|221215144|ref|ZP_03588111.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1]
gi|421471427|ref|ZP_15919714.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans ATCC
BAA-247]
gi|421475449|ref|ZP_15923396.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans CF2]
gi|221165080|gb|EED97559.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1]
gi|221171805|gb|EEE04249.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2]
gi|221182049|gb|EEE14450.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M]
gi|400225514|gb|EJO55675.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans ATCC
BAA-247]
gi|400230122|gb|EJO59935.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans CF2]
Length = 865
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/676 (67%), Positives = 573/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAI+AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAINAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMTGSPQDEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWLEVKQHFRPEFLNRIDDVVVFHGLDRHNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPLFGAR 820
>gi|350545741|ref|ZP_08915197.1| ClpB protein [Candidatus Burkholderia kirkii UZHbot1]
gi|350526470|emb|CCD40355.1| ClpB protein [Candidatus Burkholderia kirkii UZHbot1]
Length = 865
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/676 (67%), Positives = 571/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGAQVNSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEMLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEKDETSQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +Y++LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L++ +Q + Q NN + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREK
Sbjct: 505 KLPELEARLRQVTQAESQEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQREREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE L +RV+GQDEAI AV+NAIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIEGKLHERVIGQDEAIGAVANAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AAFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQGMVGKPQEKVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L+ +L K++M L++S A
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRTNIESIAKIQLQRLQERLAKLDMQLEVSDAV 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D +GAR
Sbjct: 805 LEQIGKVGYDPHFGAR 820
>gi|161524599|ref|YP_001579611.1| ATP-dependent chaperone ClpB [Burkholderia multivorans ATCC 17616]
gi|189350645|ref|YP_001946273.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
gi|160342028|gb|ABX15114.1| ATP-dependent chaperone ClpB [Burkholderia multivorans ATCC 17616]
gi|189334667|dbj|BAG43737.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
Length = 865
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/676 (67%), Positives = 572/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N + LL+T VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTHVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAI+AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAINAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMTGSPQDEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWLEVKQHFRPEFLNRIDDVVVFHGLDRHNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPLFGAR 820
>gi|330817193|ref|YP_004360898.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
gladioli BSR3]
gi|327369586|gb|AEA60942.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
gladioli BSR3]
Length = 865
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/676 (66%), Positives = 574/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSADAESQREALKKYTVDLTERARSGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVIVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPESMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KE+I++VR +I K R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGSAQLKEDIDRVRAEIAKLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q +N +K LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEAQLKQVTQAEEQEQHNPSKPRLLRTQVGTEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RV+GQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVIGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E++K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGSPQEVVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L+++ AA
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLARLHERLAKLDMQLEVTDAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L +I +G+D ++GAR
Sbjct: 805 LDQIGKVGYDPLFGAR 820
>gi|387902393|ref|YP_006332732.1| ClpB protein [Burkholderia sp. KJ006]
gi|387577285|gb|AFJ86001.1| ClpB protein [Burkholderia sp. KJ006]
Length = 865
Score = 959 bits (2479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/676 (67%), Positives = 569/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGGAQLKEEIEKVRADIVRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE LK+ +Q + Q + + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 RLPQLESQLKQVTQAEAQEQHAPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAISAV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ + +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSLTGSPQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPLFGAR 820
>gi|187923803|ref|YP_001895445.1| ATP-dependent chaperone ClpB [Burkholderia phytofirmans PsJN]
gi|187714997|gb|ACD16221.1| ATP-dependent chaperone ClpB [Burkholderia phytofirmans PsJN]
Length = 865
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/676 (66%), Positives = 568/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +Y++LE+IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG
Sbjct: 445 EEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LKE ++ + NN + LL+T+VG+EEIAE+VSR+TGIPVS+++Q EREK
Sbjct: 505 KLPGLEAQLKEVTKAEASEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE L RVVGQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIEEKLHARVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGEPQEAVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L +S +A
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLQRLHERLAKLDMQLVVSDSA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+ + +G+D ++GAR
Sbjct: 805 LEHVGKVGYDPLFGAR 820
>gi|307729565|ref|YP_003906789.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1003]
gi|307584100|gb|ADN57498.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1003]
Length = 865
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/676 (66%), Positives = 569/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +Y++LE+IW EK ++ S Q+KEEI++ R +I + R+ + V++L+YG
Sbjct: 445 EEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIDRTRAEITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LKE +Q + + NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPGLEAQLKEVTQAEAKEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE L +RV+GQDEAI+AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIEEKLHERVIGQDEAINAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AAFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGEPQEAVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R N+ SIA IQL L +L K++M L +S A
Sbjct: 745 AVWTEVKLHFRPEFLNRIDDVVVFHALDRSNVQSIARIQLQRLHERLAKLDMQLVVSDEA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+ + +G+D ++GAR
Sbjct: 805 LEHVGKVGYDPLFGAR 820
>gi|427401776|ref|ZP_18892848.1| chaperone ClpB [Massilia timonae CCUG 45783]
gi|425719488|gb|EKU82421.1| chaperone ClpB [Massilia timonae CCUG 45783]
Length = 869
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/676 (65%), Positives = 572/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 145 GGETVNSPEAEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+SL K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 265 ELAQDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKI+V+EP +E TI+ILRGLQ+KYE+HH V+ITDPAI+AA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKIIVDEPSVEATIAILRGLQEKYELHHQVDITDPAIIAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE+MD+LERR+IQLKIE EA+++E DE+S++RL L+
Sbjct: 385 FLPDKAIDLIDEAAAKIKIEIDSKPEVMDRLERRMIQLKIEREAVRKETDEASQRRLELL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI +LE +Y + E++ K EK ++ + I+EEIE++R ++ +A R+S+WQ S+L+YG
Sbjct: 445 GEEIARLEREYNDYEEVLKAEKAAVQGTTHIREEIERIRYQMEEARRQSNWQLASELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE L++ + + K LL+T+VG+EEIAE+VSR TGIPV++++Q ER+K
Sbjct: 505 RLPELEAQLRQAEDATARAEADNVKPKLLRTQVGAEEIAEVVSRATGIPVARMMQGERDK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE+ L KRVVGQDEAI AVS+AIRRSR+GLSD RPYGSFMFLGPTGVGKTELCK L
Sbjct: 565 LLHIEDELHKRVVGQDEAIEAVSDAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ E+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AAFLFDTEDALIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ LDDGR+TD +GRT++F+NT+IVMTSNLGS +I+ M+ + ++KL
Sbjct: 685 IEKAHPDVFNVLLQALDDGRMTDGQGRTVDFKNTVIVMTSNLGSHRIQSMDTDEPAVVKL 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EV+ +FRPEFINRID+I+VF L+ KNI +IA IQL+ L+ +L KM M L I +
Sbjct: 745 AVMAEVRGHFRPEFINRIDEIVVFHALDEKNIGAIARIQLHNLEARLAKMEMTLDIDDES 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ G+D +YGAR
Sbjct: 805 LQRIAEAGYDPVYGAR 820
>gi|254252226|ref|ZP_04945544.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
gi|124894835|gb|EAY68715.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
Length = 865
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/676 (66%), Positives = 572/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +Y++LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEAQLKQVTQAEEREQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQDEAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQDEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M ++ IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMSGSPQDEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S AA
Sbjct: 745 AVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDVSPAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I+ +G+D ++GAR
Sbjct: 805 LEQIAKVGYDPLFGAR 820
>gi|167836362|ref|ZP_02463245.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
gi|424903869|ref|ZP_18327382.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
gi|390931742|gb|EIP89143.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
Length = 865
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/676 (66%), Positives = 572/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQKRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEARLKQVAQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGASQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AA
Sbjct: 745 AVWVEVKQHFRPEFLNRIDDVVVFHSLDRSNIQAIARIQLARLHDRLAKLDMALDVSEAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++IS +G+D ++GAR
Sbjct: 805 LEQISKVGYDPLFGAR 820
>gi|209519546|ref|ZP_03268339.1| ATP-dependent chaperone ClpB [Burkholderia sp. H160]
gi|209500025|gb|EEA00088.1| ATP-dependent chaperone ClpB [Burkholderia sp. H160]
Length = 865
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 571/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +Y++LE+IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG
Sbjct: 445 EEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LKE ++ + + N+ + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPGLEAQLKEVTRAEAEEQNSPKRLRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE+ L +RVVGQDEAI+AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIESKLHERVVGQDEAINAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQEAVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L +S AA
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLGRLHERLAKLDMQLVVSDAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+ I +G+D ++GAR
Sbjct: 805 LEHIGKVGYDPLFGAR 820
>gi|186475703|ref|YP_001857173.1| ATP-dependent chaperone ClpB [Burkholderia phymatum STM815]
gi|184192162|gb|ACC70127.1| ATP-dependent chaperone ClpB [Burkholderia phymatum STM815]
Length = 865
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/676 (66%), Positives = 569/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGAQVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RR IQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRRIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +Y++LE+IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG
Sbjct: 445 EEEIQRLDREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK ++ + + NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEAQLKAVTKAEAEEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE L +RVVGQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIEEKLHQRVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AAFLFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHVIQSMVGEPQEAVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI SIA IQL + +L K++M L +S+AA
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRANIQSIAKIQLERVHERLAKLDMQLVVSEAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+ I +G+D ++GAR
Sbjct: 805 LELIGKVGYDPLFGAR 820
>gi|295676449|ref|YP_003604973.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1002]
gi|295436292|gb|ADG15462.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1002]
Length = 865
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 571/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +Y++LE+IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG
Sbjct: 445 EEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEIVRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LKE ++ + + N+ + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPGLEAQLKEVTRAEAEEQNSPKRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE+ L +RVVGQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIESKLHERVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQEAVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L +S AA
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLQRLHERLAKLDMQLVVSDAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+ I +G+D ++GAR
Sbjct: 805 LEHIGKVGYDPLFGAR 820
>gi|167587015|ref|ZP_02379403.1| AAA ATPase, ClpB [Burkholderia ubonensis Bu]
Length = 865
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 572/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +Y++LE+IW EK ++ S Q+KEEIEKVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +L+ LK+ +Q + + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLDAQLKQVTQAEEREQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AAFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMAGSPQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L ++L K++M L +S+AA
Sbjct: 745 AVWLEVKQHFRPEFLNRIDDVVVFHALDRGNIQSIAKIQLARLHDRLAKLDMALDVSEAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+++ +G+D ++GAR
Sbjct: 805 LEQVGKVGYDPLFGAR 820
>gi|323526162|ref|YP_004228315.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1001]
gi|407713481|ref|YP_006834046.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Burkholderia phenoliruptrix BR3459a]
gi|323383164|gb|ADX55255.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1001]
gi|407235665|gb|AFT85864.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Burkholderia phenoliruptrix BR3459a]
Length = 865
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/676 (66%), Positives = 569/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +Y++LE+IW EK ++ S Q+KEEI++ R +I + R+ + V++L+YG
Sbjct: 445 EEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIDRTRAEITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LKE +Q + + NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPGLEAQLKEVTQAEAKEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE L +RV+GQDEAI+AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIEEKLHERVIGQDEAINAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AAFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQEAVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R N+ SIA IQL L +L K++M L +S A
Sbjct: 745 AVWAEVKLHFRPEFLNRIDDVVVFHALDRSNVQSIARIQLQRLHERLAKLDMQLVVSDEA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+ + +G+D ++GAR
Sbjct: 805 LEHVGKVGYDPLFGAR 820
>gi|91783442|ref|YP_558648.1| heat-shock protein, chaperone ClpB [Burkholderia xenovorans LB400]
gi|385209766|ref|ZP_10036634.1| ATP-dependent chaperone ClpB [Burkholderia sp. Ch1-1]
gi|91687396|gb|ABE30596.1| Heat-shock protein, chaperone ClpB [Burkholderia xenovorans LB400]
gi|385182104|gb|EIF31380.1| ATP-dependent chaperone ClpB [Burkholderia sp. Ch1-1]
Length = 865
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/676 (66%), Positives = 567/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +Y++L++IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG
Sbjct: 445 EEEIERLNREYSDLDEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LKE ++ + NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPGLEAQLKEVTKAEASEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE L RVVGQDEAISAV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIEEKLHARVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 ASFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQEAVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI SIA IQL L+ +L K++M L +S A
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLQRLQERLAKLDMQLLVSDEA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+ + +G+D ++GAR
Sbjct: 805 LEHVGKVGYDPLFGAR 820
>gi|83719137|ref|YP_442726.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
gi|167581671|ref|ZP_02374545.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis TXDOH]
gi|167619788|ref|ZP_02388419.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis Bt4]
gi|257138938|ref|ZP_05587200.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
gi|83652962|gb|ABC37025.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
Length = 865
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 570/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQKRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGRQYADLEEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K+ M L +S+AA
Sbjct: 745 AVWVEVKQHFRPEFLNRIDDVVVFHSLDRSNIQAIAKIQLARLHDRLAKLEMALDVSEAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPLFGAR 820
>gi|325982689|ref|YP_004295091.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. AL212]
gi|325532208|gb|ADZ26929.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. AL212]
Length = 860
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/676 (67%), Positives = 570/676 (84%), Gaps = 3/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E + LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNN VL
Sbjct: 145 GGEQVGSAEAEGNREALKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNLVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP SL K++L+LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPESLKDKRVLVLDMAALLAGAKYRGEFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAQDEGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEVTIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+I++EIDSKPEI+DKL+RRLIQLKIE EAIK+E DE+S+KRL L+
Sbjct: 385 FLPDKAIDLIDEAAARIRMEIDSKPEILDKLDRRLIQLKIEREAIKKEKDEASQKRLQLL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI E +Y +L +IWK EK + SQQIKE +EK++L+I ATRK DWQ VS+L+YG
Sbjct: 445 EEEIKHKEREYDDLAEIWKAEKFQVHGSQQIKEAMEKLKLEIEAATRKGDWQKVSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE L++ + + +A LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 505 RLPQLEAQLQQTAGNE---STSALTPRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLLMEQKLHDRVVGQDEAVRLVSDAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRRKPY++ILLDE
Sbjct: 622 AGFLFDSEDHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRKPYAVILLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+EM + + IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQEMSGNEYQAIKQ 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVMNEVK YFRPEFINRID+++VF L K+I SIA IQL+ L+ +L K+ + L +S+AA
Sbjct: 742 AVMNEVKTYFRPEFINRIDEVVVFHALGEKHIHSIARIQLHSLEARLAKLEIQLIVSEAA 801
Query: 671 LKKISNIGFDLIYGAR 686
L +S GFD ++GAR
Sbjct: 802 LTALSQAGFDPVFGAR 817
>gi|253998254|ref|YP_003050317.1| ATP-dependent chaperone ClpB [Methylovorus glucosetrophus SIP3-4]
gi|253984933|gb|ACT49790.1| ATP-dependent chaperone ClpB [Methylovorus glucosetrophus SIP3-4]
Length = 861
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/676 (66%), Positives = 570/676 (84%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ+ E + LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGDQVNSQESEGNREALKKYTMDLTERARAGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+A LLAG KYRG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDMAALLAGAKYRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAQDEGQTIVFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE+MDKL+RRLIQLKIE EA+++E DE+S+KR LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMEIDSKPEVMDKLDRRLIQLKIEREAVRKEKDEASQKRFDLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI +LE +YA+L+ IWK EK ++ S IKE IEK++ ++ +A R+ DWQ VS+++YG
Sbjct: 445 EDEIKRLEREYADLDDIWKSEKAQVQGSAHIKEAIEKLKQQMEEAKREGDWQRVSEMQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L + + +++ N+ LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 505 KLPQLEAQLNKAASEELNGVPVKNR--LLRTQVGAEEIAEVVSRATGIPVSKMLQGERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ V++AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 563 LLTMEDKLHERVVGQDEAVRLVADAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE ++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGG LTE VRRKPYS+ILLDE
Sbjct: 623 ANFLFDSEEHLVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS I+ M D +++KL
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMSGDDYQVVKL 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK +FRPEFINRID+++VF L ++ SIA IQL L +L M+M L+++ +A
Sbjct: 743 AVMGEVKTHFRPEFINRIDEVVVFHSLGEAHVKSIAGIQLQSLAKRLNAMDMQLEVTPSA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +I+ GFD +YGAR
Sbjct: 803 LAEIAAAGFDPVYGAR 818
>gi|126442131|ref|YP_001059258.1| ATPase AAA [Burkholderia pseudomallei 668]
gi|167719228|ref|ZP_02402464.1| ATPase AAA-2 [Burkholderia pseudomallei DM98]
gi|167893910|ref|ZP_02481312.1| ATPase AAA-2 [Burkholderia pseudomallei 7894]
gi|167918626|ref|ZP_02505717.1| ATPase AAA-2 [Burkholderia pseudomallei BCC215]
gi|126221624|gb|ABN85130.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 668]
Length = 865
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 571/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AA
Sbjct: 745 AVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPLFGAR 820
>gi|390572032|ref|ZP_10252259.1| ATP-dependent chaperone ClpB [Burkholderia terrae BS001]
gi|420256959|ref|ZP_14759764.1| ATP-dependent chaperone ClpB [Burkholderia sp. BT03]
gi|389936015|gb|EIM97916.1| ATP-dependent chaperone ClpB [Burkholderia terrae BS001]
gi|398042076|gb|EJL35121.1| ATP-dependent chaperone ClpB [Burkholderia sp. BT03]
Length = 865
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/676 (66%), Positives = 568/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYTIDLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGAQVHSQDAESQREALKKYTIDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR+YIE
Sbjct: 265 DIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RR IQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRRIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +Y++LE+IW EK ++ S Q+KEEIEK R +I + R+ + V++L+YG
Sbjct: 445 EEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK ++ + + NN + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLESQLKAVTKAEAEEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE L +RVVGQDEAI+AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLQIEEKLHQRVVGQDEAITAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AAFLFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGQPEEAVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI SIA IQL + +L K++M L +S AA
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLERVHERLAKLDMQLVVSDAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L+ I +G+D ++GAR
Sbjct: 805 LELIGKVGYDPLFGAR 820
>gi|134277175|ref|ZP_01763890.1| ATP-dependent chaperone protein ClpB [Burkholderia pseudomallei
305]
gi|134250825|gb|EBA50904.1| ATP-dependent chaperone protein ClpB [Burkholderia pseudomallei
305]
Length = 865
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 571/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSPQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AA
Sbjct: 745 AVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPLFGAR 820
>gi|313200327|ref|YP_004038985.1| ATP-dependent chaperone clpb [Methylovorus sp. MP688]
gi|312439643|gb|ADQ83749.1| ATP-dependent chaperone ClpB [Methylovorus sp. MP688]
Length = 886
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/676 (66%), Positives = 570/676 (84%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ+ E + LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 170 GGDQVNSQESEGNREALKKYTMDLTERARAGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 229
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+A LLAG KYRG+FE+RLK +LK
Sbjct: 230 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDMAALLAGAKYRGDFEERLKSVLK 289
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 290 ELAQDEGQTIVFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 349
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS RYI+DR
Sbjct: 350 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSQRYITDR 409
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE+MDKL+RRLIQLKIE EA+++E DE+S+KR LI
Sbjct: 410 FLPDKAIDLIDEAASRIKMEIDSKPEVMDKLDRRLIQLKIEREAVRKEKDEASQKRFDLI 469
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI +LE +YA+L+ IWK EK ++ S IKE IEK++ ++ +A R+ DWQ VS+++YG
Sbjct: 470 EDEIKRLEREYADLDDIWKSEKAQVQGSAHIKEAIEKLKQQMEEAKREGDWQRVSEMQYG 529
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L + + +++ N+ LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 530 KLPQLEAQLNKAASEELNGVPVKNR--LLRTQVGAEEIAEVVSRATGIPVSKMLQGERDK 587
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ V++AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 588 LLTMEDKLHERVVGQDEAVRLVADAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKAL 647
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE ++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGG LTE VRRKPYS+ILLDE
Sbjct: 648 ANFLFDSEEHLVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDE 707
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS I+ M D +++KL
Sbjct: 708 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMSGDDYQVVKL 767
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK +FRPEFINRID+++VF L ++ SIA IQL L +L M+M L+++ +A
Sbjct: 768 AVMGEVKTHFRPEFINRIDEVVVFHSLGEAHVKSIAGIQLQSLAKRLNAMDMQLEVTPSA 827
Query: 671 LKKISNIGFDLIYGAR 686
L +I+ GFD +YGAR
Sbjct: 828 LAEIAAAGFDPVYGAR 843
>gi|53719118|ref|YP_108104.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243]
gi|254189090|ref|ZP_04895601.1| clpB protein [Burkholderia pseudomallei Pasteur 52237]
gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243]
gi|157936769|gb|EDO92439.1| clpB protein [Burkholderia pseudomallei Pasteur 52237]
Length = 876
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/676 (66%), Positives = 571/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 156 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 215
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 216 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 275
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 276 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 335
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 336 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 395
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 396 FLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALI 455
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG
Sbjct: 456 EEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYG 515
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 516 KLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 575
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 576 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 635
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 636 AGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 695
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 696 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSPQEEIKD 755
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AA
Sbjct: 756 AVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAA 815
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 816 LEQIGKVGYDPLFGAR 831
>gi|76812125|ref|YP_333784.1| ClpB heat-shock protein [Burkholderia pseudomallei 1710b]
gi|167738226|ref|ZP_02411000.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei 14]
gi|167902362|ref|ZP_02489567.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei NCTC 13177]
gi|167910600|ref|ZP_02497691.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei 112]
gi|254261495|ref|ZP_04952549.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1710a]
gi|254297398|ref|ZP_04964851.1| clpB protein [Burkholderia pseudomallei 406e]
gi|386861504|ref|YP_006274453.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026b]
gi|418533774|ref|ZP_13099633.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026a]
gi|418540647|ref|ZP_13106174.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258a]
gi|418546892|ref|ZP_13112080.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258b]
gi|76581578|gb|ABA51053.1| ClpB heat-shock protein [Burkholderia pseudomallei 1710b]
gi|157807919|gb|EDO85089.1| clpB protein [Burkholderia pseudomallei 406e]
gi|254220184|gb|EET09568.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1710a]
gi|385360734|gb|EIF66648.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026a]
gi|385361021|gb|EIF66923.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258a]
gi|385362820|gb|EIF68618.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258b]
gi|385658632|gb|AFI66055.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026b]
Length = 865
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/676 (66%), Positives = 571/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AA
Sbjct: 745 AVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPLFGAR 820
>gi|53723604|ref|YP_103036.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 23344]
gi|67639679|ref|ZP_00438519.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei GB8 horse
4]
gi|121598639|ref|YP_993186.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei SAVP1]
gi|124385885|ref|YP_001026039.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei NCTC 10229]
gi|126448469|ref|YP_001080692.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei NCTC 10247]
gi|167003461|ref|ZP_02269247.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei PRL-20]
gi|254178097|ref|ZP_04884752.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 10399]
gi|254206315|ref|ZP_04912667.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei JHU]
gi|254358273|ref|ZP_04974546.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei
2002721280]
gi|52427027|gb|AAU47620.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 23344]
gi|121227449|gb|ABM49967.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei SAVP1]
gi|124293905|gb|ABN03174.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei NCTC
10229]
gi|126241339|gb|ABO04432.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei NCTC
10247]
gi|147753758|gb|EDK60823.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei JHU]
gi|148027400|gb|EDK85421.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei
2002721280]
gi|160699136|gb|EDP89106.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 10399]
gi|238520268|gb|EEP83730.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei GB8 horse
4]
gi|243061022|gb|EES43208.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei PRL-20]
Length = 865
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/676 (66%), Positives = 571/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AA
Sbjct: 745 AVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPLFGAR 820
>gi|126453997|ref|YP_001066525.1| clpB protein [Burkholderia pseudomallei 1106a]
gi|167815415|ref|ZP_02447095.1| ClpB heat-shock protein [Burkholderia pseudomallei 91]
gi|167823825|ref|ZP_02455296.1| ClpB heat-shock protein [Burkholderia pseudomallei 9]
gi|167845366|ref|ZP_02470874.1| ClpB heat-shock protein [Burkholderia pseudomallei B7210]
gi|217421888|ref|ZP_03453392.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 576]
gi|226197488|ref|ZP_03793065.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei Pakistan 9]
gi|237812581|ref|YP_002897032.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei MSHR346]
gi|242314296|ref|ZP_04813312.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106b]
gi|254179519|ref|ZP_04886118.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1655]
gi|254197201|ref|ZP_04903623.1| clpB protein [Burkholderia pseudomallei S13]
gi|403518952|ref|YP_006653085.1| clpB protein [Burkholderia pseudomallei BPC006]
gi|418382969|ref|ZP_12966888.1| ClpB heat-shock protein [Burkholderia pseudomallei 354a]
gi|418553114|ref|ZP_13117952.1| ClpB heat-shock protein [Burkholderia pseudomallei 354e]
gi|126227639|gb|ABN91179.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106a]
gi|169653942|gb|EDS86635.1| clpB protein [Burkholderia pseudomallei S13]
gi|184210059|gb|EDU07102.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1655]
gi|217395630|gb|EEC35648.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 576]
gi|225930867|gb|EEH26877.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei Pakistan 9]
gi|237506453|gb|ACQ98771.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei MSHR346]
gi|242137535|gb|EES23937.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106b]
gi|385372048|gb|EIF77180.1| ClpB heat-shock protein [Burkholderia pseudomallei 354e]
gi|385376808|gb|EIF81443.1| ClpB heat-shock protein [Burkholderia pseudomallei 354a]
gi|403074594|gb|AFR16174.1| clpB protein [Burkholderia pseudomallei BPC006]
Length = 865
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/676 (66%), Positives = 571/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSQDAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+L++IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSPQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S+AA
Sbjct: 745 AVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDVSEAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPLFGAR 820
>gi|395761758|ref|ZP_10442427.1| ATP-dependent protease Hsp 100 [Janthinobacterium lividum PAMC
25724]
Length = 868
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/677 (67%), Positives = 577/677 (85%), Gaps = 4/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + SQ+ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRRSKNNPVL
Sbjct: 145 GGNKVDSQEAEGQREALKKYTLDLTERARKGKLDPVIGRDDEIRRTIQILQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAMDEGQTIVFIDEMHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ KY +HH VEITD AI+AA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQDKYALHHKVEITDAAIIAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S +RL LI
Sbjct: 385 FLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASLRRLGLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL+ +Y + E+I K EK +++ S IKEEIE V+L++ +ATR+S+WQ VS+L+YG
Sbjct: 445 EEEIVKLQREYNDFEEILKAEKAVVQGSTHIKEEIENVKLQMEQATRESNWQKVSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLP-NNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L +LE LK Q D +P + ++ LL+T+VG+EEIAE+VSR TGIPVS+++Q ER+
Sbjct: 505 KLPQLEAQLK---QADSGIPKRDPDQPKLLRTEVGAEEIAEVVSRATGIPVSRMMQGERD 561
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL+IE L +RVVGQDEAI+AV++AIRRSR+GL+D RPYGSFMFLGPTGVGKTEL K
Sbjct: 562 KLLHIEEKLHERVVGQDEAITAVADAIRRSRAGLADPNRPYGSFMFLGPTGVGKTELSKA 621
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EES+IRIDMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS+ILLD
Sbjct: 622 LATFLFDTEESMIRIDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSVILLD 681
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA++DVFN+LLQ+LDDGR+TD +GRT++F+NT+I+MTSNLGS KI+ ME D ++K
Sbjct: 682 EVEKAHADVFNVLLQVLDDGRMTDGQGRTVDFKNTVIIMTSNLGSHKIQAMESDDPGVVK 741
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
LAVM EV+ +FRPEF+NRID+I+VF L+ KNI +IA IQL IL+ +L +M+M L ++ A
Sbjct: 742 LAVMAEVRSHFRPEFVNRIDEIVVFHGLDEKNIGAIAKIQLKILEERLARMDMQLSLTDA 801
Query: 670 ALKKISNIGFDLIYGAR 686
AL++I+ G+D +YGAR
Sbjct: 802 ALQQIAEAGYDPVYGAR 818
>gi|326316084|ref|YP_004233756.1| ATP-dependent chaperone ClpB [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323372920|gb|ADX45189.1| ATP-dependent chaperone ClpB [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 869
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/676 (66%), Positives = 565/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 143 GGAQVNSAEAEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPSVEATIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE +DKL+RRLIQL+IE EA+++E DE+S+KRL L+
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEIDSKPEAIDKLDRRLIQLQIEREAVRKEKDEASQKRLALL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI KL+ + A+LE IW EK + SQQ++E++EKV+L+I + RK D+ V++L+YG
Sbjct: 443 EDEIGKLQKEIADLEDIWTSEKAQAQGSQQVREQVEKVKLQIEELKRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LER LKE K+ A LL+T+VG+EEIAE+VSR TGIPVSK++Q E++K
Sbjct: 503 KLPDLERQLKEAQAKEEGTDGTATPNRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEKDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEAI+AV+NAIRRSRSGL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLQMEDKLHERVVGQDEAIAAVANAIRRSRSGLADPNRPMGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 623 AGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + +K
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDADDVKE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K YFRPEF+NRID+ +VF L+ KNI +IA IQL +L+ +L KM++ L++S A
Sbjct: 743 AVWGELKNYFRPEFLNRIDETVVFHALDAKNIEAIARIQLQLLEARLAKMDLHLQVSPGA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 803 LSELAKVGFDPVFGAR 818
>gi|388570198|ref|ZP_10156558.1| ATP-dependent chaperone ClpB [Hydrogenophaga sp. PBC]
gi|388262580|gb|EIK88210.1| ATP-dependent chaperone ClpB [Hydrogenophaga sp. PBC]
Length = 868
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/676 (67%), Positives = 570/676 (84%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 143 GGQQVDSPEAEGQREALKKYTMDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP+SL K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLH 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE MD+L+RRLIQL+IE EAIK+E DE+S+KRL LI
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEIDSKPEAMDRLDRRLIQLQIEREAIKKETDEASQKRLGLI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
EI++L+ + A+LE+IWK EK + S Q+KEEI+K+R +I + TRK D+ V++L+YG
Sbjct: 443 DVEIDRLKRELADLEEIWKAEKAQAQGSAQVKEEIDKLRHQIEEFTRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ LK+ +Q +A + LL+T+VG+EEIAE+V+R TGIPVSK++Q ER+K
Sbjct: 503 KLPELEKRLKD-AQAAETGKKDAGRPQLLRTQVGAEEIAEVVARATGIPVSKLMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 562 LLQMEDKLHQRVVGQDEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + +K
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHMIQSMVGQPYDEVKE 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K YFRPEF+NRID+ +VF L+ KNI +IA IQL L+ +L KM++ L +S AA
Sbjct: 742 AVWGELKGYFRPEFLNRIDETVVFHALDAKNIEAIAAIQLKALQARLHKMDLSLDVSPAA 801
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 802 LGELAKVGFDPVFGAR 817
>gi|120609936|ref|YP_969614.1| ATPase [Acidovorax citrulli AAC00-1]
gi|120588400|gb|ABM31840.1| ATPase AAA-2 domain protein [Acidovorax citrulli AAC00-1]
Length = 869
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/676 (66%), Positives = 565/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 143 GGAQVNSAEAEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPSVEATIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE +DKL+RRLIQL+IE EA+K+E DE+S+KRL L+
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEIDSKPEAIDKLDRRLIQLQIEREAVKKEKDEASQKRLALL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL+ + A+LE IW EK + SQQ++E++EKV+L+I + RK D+ V++L+YG
Sbjct: 443 EEEIGKLQKEIADLEDIWTSEKAQAQGSQQVREQVEKVKLQIEELKRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L LER LKE K+ A LL+T+VG+EEIAE+VSR TGIPVSK++Q E++K
Sbjct: 503 RLPDLERQLKEAQAKEEGTDGTATPNRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEKDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEAI+AV+NAIRRSRSGL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLQMEDKLHERVVGQDEAIAAVANAIRRSRSGLADPNRPMGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 623 AGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + +K
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDADDVKE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ KNI +IA IQL +L+ +L KM++ L++S A
Sbjct: 743 AVWGELKNHFRPEFLNRIDETVVFHALDAKNIEAIARIQLQLLEARLAKMDLHLQVSPGA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 803 LSELAKVGFDPVFGAR 818
>gi|238027045|ref|YP_002911276.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
glumae BGR1]
gi|237876239|gb|ACR28572.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
glumae BGR1]
Length = 865
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/676 (65%), Positives = 570/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSADAESQREALKKYTVDLTERARSGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVIVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPESMDRLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IW EK ++ S Q+KE+I++VR I + R+ + V++L+YG
Sbjct: 445 EEEIERLGREYADLEEIWTAEKAAVQGSAQLKEDIDRVRADIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK+ +Q + Q N ++ LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEAQLKQVTQAEEQNEQNPSRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RV+GQ+EAI AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTE+CK L
Sbjct: 565 LLHIEEKLHERVIGQEEAIDAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTEVCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMAGSPQEAVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK++FRPEF+NRIDD++VF L+R NI +IA IQL L ++L K++M L +S AA
Sbjct: 745 AVWEEVKLHFRPEFLNRIDDVVVFHALDRANIQAIAKIQLARLHDRLAKLDMQLDVSDAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L +I +G+D ++GAR
Sbjct: 805 LDQIGKVGYDPLFGAR 820
>gi|339326277|ref|YP_004685970.1| chaperone protein ClpB [Cupriavidus necator N-1]
gi|338166434|gb|AEI77489.1| chaperone protein ClpB [Cupriavidus necator N-1]
Length = 862
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/676 (66%), Positives = 570/676 (84%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGDSVNSAEAEGQREALKKYTIDLTERARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPESMDKLERRTIQLKIEREAVKKETDEASMKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +YA+L++IWK EK + + +KEEIEKV+L+I K R+ V++L+YG
Sbjct: 444 EQEIARLEKEYADLDEIWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LK + + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 504 KLPGLEGKLKAATDAEASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLKMEDRLHARVVGQDEAVRLVSDAIRRSRAGLADENRPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AEFMFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMTGEPQEAIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EV+ +FRPEF+NRID+++VF L++K+I SIA IQL+ L+ +L +M+M L++S+ A
Sbjct: 742 AVWQEVRTHFRPEFLNRIDEVVVFHALDQKHIESIARIQLHRLQARLARMDMTLEVSETA 801
Query: 671 LKKISNIGFDLIYGAR 686
L+KI++ G+D ++GAR
Sbjct: 802 LEKIASAGYDPVFGAR 817
>gi|332528193|ref|ZP_08404221.1| ATP-dependent chaperone ClpB [Rubrivivax benzoatilyticus JA2]
gi|332112761|gb|EGJ12554.1| ATP-dependent chaperone ClpB [Rubrivivax benzoatilyticus JA2]
Length = 864
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/676 (66%), Positives = 569/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 144 GGQKVDSPEAEGQREALKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDMAGLLAGAKYRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S ++ II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+Y+E
Sbjct: 264 EVSADEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYVE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E T++ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATVAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE MD+L+RR+IQLKIE EA+K+E DE+S++RL LI
Sbjct: 384 FLPDKAIDLIDEAAAKIKIEIDSKPEAMDRLDRRMIQLKIEREAVKKEQDEASQRRLGLI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +Y +LE+IW EK + S Q+KEEI++++ +I + RK D+ V++L+YG
Sbjct: 444 EEELLKLQREYNDLEEIWTAEKAQAQGSAQVKEEIDRIKFQIEELKRKGDFNRVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ LKE K+ LL+T VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 504 KLPELEKRLKEAQAKEAGKAQGGQGPQLLRTMVGAEEIAEVVSRATGIPVSKLMQGERDK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEAI AV++AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 564 LLQMESRLHERVVGQDEAIVAVADAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTELCKAL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E+ +IR+DMSE++EKHS+SRLIGAPPGY+GY+EGG LTE VRRKPYS++LLDE
Sbjct: 624 ASFLFDSEDHMIRVDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRKPYSVLLLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I +M E+++
Sbjct: 684 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMAGQPTELVRE 743
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+ +VF L+ KNI +IA IQL +L+ +L K+ M L++S AA
Sbjct: 744 AVWGEVKSHFRPEFLNRIDEAVVFHALDEKNIEAIAKIQLKLLETRLEKLEMKLEVSPAA 803
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 804 LAELAKVGFDPVFGAR 819
>gi|113868225|ref|YP_726714.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
gi|113527001|emb|CAJ93346.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
Length = 862
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/676 (66%), Positives = 569/676 (84%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGDSVNSAEAEGQREALKKYTIDLTERARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPESMDKLERRTIQLKIEREAVKKETDEASMKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +YA+L++IWK EK + + +KEEIEKV+L+I K R+ V++L+YG
Sbjct: 444 EQEIARLEKEYADLDEIWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LK + + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 504 KLPGLEGKLKAATDAEASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLKMEDRLHGRVVGQDEAVRLVSDAIRRSRAGLADENRPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AEFMFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMTGEPQEAIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EV+ +FRPEF+NRID+++VF L++K+I SIA IQL L+ +L +M+M L++S+ A
Sbjct: 742 AVWQEVRTHFRPEFLNRIDEVVVFHALDQKHIESIARIQLQRLQARLARMDMTLEVSETA 801
Query: 671 LKKISNIGFDLIYGAR 686
L+KI++ G+D ++GAR
Sbjct: 802 LEKIASAGYDPVFGAR 817
>gi|30250327|ref|NP_842397.1| ClpB ATPase dependent protease, chaperonin [Nitrosomonas europaea
ATCC 19718]
gi|54035824|sp|Q82SD8.1|CLPB_NITEU RecName: Full=Chaperone protein ClpB
gi|30181122|emb|CAD86314.1| ClpB ATPase dependent protease, chaperonin [Nitrosomonas europaea
ATCC 19718]
Length = 863
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/676 (66%), Positives = 567/676 (83%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + E LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVTDAEAEGSREALKKYTLDLTERARSGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 265 ELAQDEGRTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPGVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+I++E DSKPE+MDKL+RRLIQLKIE EA+++E D++SKKRL L+
Sbjct: 385 FLPDKAIDLIDEAAARIRMEQDSKPEVMDKLDRRLIQLKIEREAVRKEKDDASKKRLALL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI+KLE +YA+L++I K EK+ K SQ+IKEE++K+R + A RK D Q S+L YG
Sbjct: 445 EEEISKLEREYADLDEILKAEKSRAKGSQEIKEELDKLRREEEAARRKGDLQRASELLYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE L E+ + A + L +T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 505 RIPQLEAQLAEQLHH-AESAEEAVQPKLFRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQDEA+ VS+AIRRSRSGL+D RPYGSF+FLGPTGVGKTELCK L
Sbjct: 564 LLFMEDKLHERVIGQDEAVRLVSDAIRRSRSGLADPNRPYGSFLFLGPTGVGKTELCKAL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 624 AGFLFDSEEHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKL
Sbjct: 684 VEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKL 743
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK YFRPEFINRID+++VF L +I SIA IQL+ L +L +M M L +S+ A
Sbjct: 744 AVMGEVKTYFRPEFINRIDEVVVFHALGEAHIKSIARIQLSNLGKRLAQMEMKLVVSEPA 803
Query: 671 LKKISNIGFDLIYGAR 686
L K++ +GFD ++GAR
Sbjct: 804 LTKLAEVGFDPVFGAR 819
>gi|222111721|ref|YP_002553985.1| ATP-dependent chaperone clpb [Acidovorax ebreus TPSY]
gi|221731165|gb|ACM33985.1| ATP-dependent chaperone ClpB [Acidovorax ebreus TPSY]
Length = 867
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/691 (65%), Positives = 577/691 (83%), Gaps = 8/691 (1%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+ SL G+ + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRR
Sbjct: 128 GVTRKSLEAAIDAVRGGQKVDSAEAEGQREALKKYTLDLTERARQGKLDPVIGRDDEIRR 187
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRI+ GEVP +L +K++L+LD+A LLAG
Sbjct: 188 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVEGEVPETLKNKRVLVLDMAGLLAGA 247
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRGEFE+RLK +LKE+++ + II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELH
Sbjct: 248 KYRGEFEERLKSVLKEVAHEEGRIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELH 307
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
CIGATTL+EYR+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGLQ +YE HHGV+ITDPA
Sbjct: 308 CIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLQVRYEAHHGVDITDPA 367
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS+RYI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE MDKLERR+IQLKIE EA+
Sbjct: 368 IVAAAELSHRYITDRFLPDKAIDLIDEAAAKIKIEIDSKPESMDKLERRMIQLKIEREAM 427
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
K+E DE+S+KRL LI++E+ +E +YA+LE++WK EK + S+QI+++I+ +R +I+
Sbjct: 428 KKETDEASQKRLQLIEEELGNVEREYADLEEVWKAEKASAQGSEQIRKDIDAIRTQIDDL 487
Query: 356 TRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRT 415
RK D+ V++L+YG L +LE+ LKE +D + K LL+T+VG+EEIAE+VSR
Sbjct: 488 KRKGDFNKVAELQYGTLPELEKRLKEA--QDSEAGGTGTKHKLLRTQVGAEEIAEVVSRA 545
Query: 416 TGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMF 475
TGIPV+K++Q E++KLL++E L +RVVGQDEAISAV+NAIRRSRSGLSD RP GSF+F
Sbjct: 546 TGIPVAKMMQGEKDKLLHMEEKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPLGSFLF 605
Query: 476 LGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLT 535
LGPTGVGKTELCK L+ +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLT
Sbjct: 606 LGPTGVGKTELCKALAGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLT 665
Query: 536 EIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSD 595
E VRRKPYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS
Sbjct: 666 EAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSH 725
Query: 596 KIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKN 655
I+ M D E IK AV E+K +FRPEF+NRID+ +VF L+ K+I +IA IQL +L+
Sbjct: 726 LIQAMVGQDAEDIKEAVWGELKGHFRPEFLNRIDETVVFHGLDAKHIEAIARIQLRLLEA 785
Query: 656 KLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+L KM++ L++S AA+ +++ +GFD ++GAR
Sbjct: 786 RLAKMDLALQVSPAAMGELAKVGFDPVFGAR 816
>gi|319763932|ref|YP_004127869.1| ATP-dependent chaperone clpb [Alicycliphilus denitrificans BC]
gi|330823804|ref|YP_004387107.1| ATP-dependent chaperone ClpB [Alicycliphilus denitrificans K601]
gi|317118493|gb|ADV00982.1| ATP-dependent chaperone ClpB [Alicycliphilus denitrificans BC]
gi|329309176|gb|AEB83591.1| ATP-dependent chaperone ClpB [Alicycliphilus denitrificans K601]
Length = 867
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/676 (66%), Positives = 573/676 (84%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 143 GGQKVDSAEAEGQREALKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP +L +K++L+LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKSVLK 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ II+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 263 EVAQDEGRIILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGLQ +YE HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKVLVEEPSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IKIEIDSKPE +DKLERR+IQLKIE EA+K+E DE+S+KRL LI
Sbjct: 383 FLPDKAIDLIDEAAARIKIEIDSKPEALDKLERRMIQLKIEREAMKKETDEASQKRLQLI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ E +YA+LE++WK EK + S+QI+++I+ +R++I RK D+ V++L+YG
Sbjct: 443 EEELANAEREYADLEEVWKAEKASAQGSEQIRKDIDAIRIQIEDLKRKGDYNRVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ LKE +D + A + LL+T VG+EEIAE+VSR TGIPV+K++Q E++K
Sbjct: 503 KLPELEKRLKEA--QDSEAGGGAPRHQLLRTHVGAEEIAEVVSRATGIPVAKMMQGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L +RVVGQDEAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 561 LLHMEEKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPLGSFLFLGPTGVGKTELCKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 621 AGFLFDSEEHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D E IK
Sbjct: 681 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPLIQAMVGQDAEDIKE 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ K+I +IA IQL +L+ +L KM++ L++S AA
Sbjct: 741 AVWGELKSHFRPEFLNRIDETVVFHGLDAKHIEAIARIQLRLLEARLAKMDLSLQVSPAA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ +++ +GFD ++GAR
Sbjct: 801 MGELAKVGFDPVFGAR 816
>gi|34497399|ref|NP_901614.1| ATP-dependent Clp protease subunit [Chromobacterium violaceum ATCC
12472]
gi|54035800|sp|Q7NWN7.1|CLPB_CHRVO RecName: Full=Chaperone protein ClpB
gi|34103255|gb|AAQ59618.1| ATP-dependent Clp protease subunit; heat-shock protein
[Chromobacterium violaceum ATCC 12472]
Length = 859
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/676 (66%), Positives = 572/676 (84%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ S E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGESVNSADAEGQREALKKYTMDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRLLVLDLAALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKDDGQTLIFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVGEPSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RRLIQLKIE EA+ +E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMELDSKPEAMDKLDRRLIQLKIEREAVNKESDEASQKRLKLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI +L +YA+LE+IWK EK + SQ IKEEI+++++ + + RK DWQ +++L+YG
Sbjct: 445 EDEIAELSREYADLEEIWKAEKAAQQGSQSIKEEIDRLKVDMEELKRKGDWQKLAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LKE + N+ LL+T+VG+EEIAE+VSR TGIPVSK++ EREK
Sbjct: 505 KLPQLEARLKEAESAGDKGEAKPNR--LLRTQVGAEEIAEVVSRATGIPVSKMLTGEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L +RVVGQDEA+SAV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL
Sbjct: 563 LLKMEDVLHQRVVGQDEAVSAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++++ +IRIDMSE++EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 623 ASFLFDSKDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS +I+ M D ++IKL
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQQIQAMATDDYQVIKL 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK FRPEFINRID+++VF L+ K+I SIA IQL L+N+L K+ + L+IS A
Sbjct: 743 AVMAEVKTQFRPEFINRIDEVVVFHGLDEKHIQSIARIQLKSLENRLAKLELSLQISDEA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +S GFD +YGAR
Sbjct: 803 LALLSEAGFDPVYGAR 818
>gi|149927826|ref|ZP_01916077.1| probable atp-dependent protease (heat shock protein) [Limnobacter
sp. MED105]
gi|149823448|gb|EDM82679.1| probable atp-dependent protease (heat shock protein) [Limnobacter
sp. MED105]
Length = 862
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/693 (65%), Positives = 576/693 (83%), Gaps = 13/693 (1%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+ SLN G + S E LKKYTIDLTE+AR+GKLDPVIGRDDEIRR
Sbjct: 130 GLNAQSLNTAIEQVRGGAAVDSADGESQREALKKYTIDLTERARMGKLDPVIGRDDEIRR 189
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
AIQ+LQRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP++L +K++L+LD+ALLLAG
Sbjct: 190 AIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDTLKNKRVLVLDMALLLAGA 249
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRGEFE+RLK +LK+++ ++ I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELH
Sbjct: 250 KYRGEFEERLKAVLKDVAADEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELH 309
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
CIGATTL+EYR+YIEKDAA ERRFQK+LV EP +E TI+ILRGLQ++YE+HHGV+ITDPA
Sbjct: 310 CIGATTLDEYRKYIEKDAALERRFQKVLVGEPSVESTIAILRGLQERYELHHGVDITDPA 369
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RR+IQLKIE EA+
Sbjct: 370 IVAAAELSHRYITDRFLPDKAIDLIDEAAARIKMEIDSKPEEMDKLDRRIIQLKIEREAV 429
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
KRE D++SKKRL LI++EI +LE +YA+L++IWK EK ++ S IKEEI+ +R +I +
Sbjct: 430 KREQDDASKKRLALIEEEIVRLEREYADLDEIWKSEKAAVQGSAAIKEEIDHIRAEIEQW 489
Query: 356 TRKSDWQTVSKLKYGELNKLERILKE--KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVS 413
RK DWQ VS+L+YG+L LE+ L + ++ + PN LL+T+VG+EEIAE+VS
Sbjct: 490 KRKGDWQKVSELQYGKLPDLEKKLNDVKDNEGGEKKPNR-----LLRTQVGTEEIAEVVS 544
Query: 414 RTTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSF 473
R TGIPVSK++Q ER+KLL +E L RVVGQDEA++ VS+AIRRSR+GLSD +P GSF
Sbjct: 545 RATGIPVSKMLQGERDKLLQMEAALHMRVVGQDEAVTLVSDAIRRSRAGLSDPNKPLGSF 604
Query: 474 MFLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGY 533
+FLGPTGVGKTELCK L+ +F++E+ ++RIDMSEF+EKH++SRL+GAPPGY+GY+EGGY
Sbjct: 605 LFLGPTGVGKTELCKALAGFLFDSEDHLVRIDMSEFMEKHTVSRLVGAPPGYVGYDEGGY 664
Query: 534 LTEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLG 593
LTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLG
Sbjct: 665 LTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLG 724
Query: 594 SDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNIL 653
S +I+ + D E+IK AVM EVK++FRPEFINR+D+++VF L+ +I +IA IQL L
Sbjct: 725 SHEIQRLAGQDGEVIKAAVMEEVKMHFRPEFINRVDELVVFHALDNAHIANIARIQLQRL 784
Query: 654 KNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+ +L +M L++S AAL ++ GFD +YGAR
Sbjct: 785 QQRLASRDMRLEVSDAALAEVVKAGFDPLYGAR 817
>gi|194289894|ref|YP_002005801.1| chaperone [Cupriavidus taiwanensis LMG 19424]
gi|193223729|emb|CAQ69736.1| Chaperone [Cupriavidus taiwanensis LMG 19424]
Length = 862
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/676 (66%), Positives = 568/676 (84%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGESVNSAEAEGQREALKKYTIDLTERARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASLKRLDLI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +YA+L++IWK EK + + +KEEIEKV+L+I K R+ V++L+YG
Sbjct: 444 EQEIARLEKEYADLDEIWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LK + + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 504 KLPGLEGKLKAATDAEASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQDEA+ VS+AIRRSR+GL+D +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLKMEERLHARVVGQDEAVRLVSDAIRRSRAGLADENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AEFMFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMAGEPQEAIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EV+ +FRPEF+NRID+++VF L++KNI SIA IQL L+ +L +M+M L++S A
Sbjct: 742 AVWQEVRTHFRPEFLNRIDEVVVFHALDQKNIESIARIQLQRLQARLARMDMTLEVSDHA 801
Query: 671 LKKISNIGFDLIYGAR 686
L+KI++ G+D ++GAR
Sbjct: 802 LEKIASAGYDPVFGAR 817
>gi|124266742|ref|YP_001020746.1| ATP-dependent protease (heat shock protein) [Methylibium
petroleiphilum PM1]
gi|124259517|gb|ABM94511.1| putative ATP-dependent protease (heat shock protein) [Methylibium
petroleiphilum PM1]
Length = 867
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/676 (65%), Positives = 573/676 (84%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 144 GGQKVDSAESEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL SK++L+LD+ALLLAG KYRGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVAGEVPESLKSKRVLVLDMALLLAGAKYRGEFEERLKSVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+Y+E
Sbjct: 264 EVAQDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYVE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAK+KIEIDSKPE+MD+L+RRLIQLKIE EA+++E DE+S+KR LI
Sbjct: 384 FLPDKAIDLIDEAAAKVKIEIDSKPEVMDRLDRRLIQLKIEREAVRKEKDEASQKRFGLI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I KLE + A+L+++WK EK + S +KE+I+++R +I + RK D+ V++L+YG
Sbjct: 444 EEDIAKLEREAADLDEVWKAEKATAQGSAHLKEDIDRIRTQIEEFKRKGDFNKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ LK+ K+ + + K TLL+T VGSEEIAE+V+R TGIPV+K++Q ER+K
Sbjct: 504 KLPELEKKLKDAQAKEAKGGVD-GKPTLLRTLVGSEEIAEVVARATGIPVAKLMQGERQK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L +RVVGQDEAI AVS++IRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLDMEVKLHERVVGQDEAIRAVSDSIRRSRAGLSDPNRPTGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS++LLDE
Sbjct: 623 AGFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSVLLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I +M D E+I+
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMAGQDPELIRE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ ++I +IA IQL L+ +L K+++ L++S AA
Sbjct: 743 AVWGELKTHFRPEFLNRIDETVVFHALDAQHIEAIAGIQLKALEARLAKLDIRLEVSAAA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 803 LSELAKVGFDPVFGAR 818
>gi|237653311|ref|YP_002889625.1| ATP-dependent chaperone ClpB [Thauera sp. MZ1T]
gi|237624558|gb|ACR01248.1| ATP-dependent chaperone ClpB [Thauera sp. MZ1T]
Length = 860
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 560/676 (82%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ SQ E L KY +DLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 145 GGANVGSQDAEGQRESLSKYCLDLTERARSGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ + II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 EIAQEEGRIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEATIAILRGLQEKYEIHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+S KRL LI
Sbjct: 385 FLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRMIQLKIEREAVKKEKDEASLKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL+ +Y +LE++WK EK + S IKEEI+ +R ++ + RK V++L+YG
Sbjct: 445 EDELAKLQREYNDLEEVWKAEKAKVAGSAHIKEEIDALRAQMAEYQRKGQLDKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L+ Q NA LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 505 KLPQLEGQLRMAEQAG----QNAAPNKLLRTEVGAEEIAEVVSRATGIPVSKMMQGEREK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ V++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCKTL
Sbjct: 561 LLKMEDKLHERVVGQDEAVRLVADAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKTL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL DE
Sbjct: 621 ANFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M D +IKL
Sbjct: 681 VEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQAMAGDDYGVIKL 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK YFRPEFINRID+++VF L+ K+I IA IQL L+ +L ++ M ++IS AA
Sbjct: 741 AVMAEVKTYFRPEFINRIDEVVVFHALDEKHIAGIAKIQLQYLEKRLARLEMGMEISDAA 800
Query: 671 LKKISNIGFDLIYGAR 686
L +++ GFD ++GAR
Sbjct: 801 LAELATAGFDPVFGAR 816
>gi|73541668|ref|YP_296188.1| ATPase AAA [Ralstonia eutropha JMP134]
gi|72119081|gb|AAZ61344.1| AAA ATPase, central region:Clp, N terminal [Ralstonia eutropha
JMP134]
Length = 862
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGDAVNSADAETQREALKKYTIDLTERARMGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASLKRLDLI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +YA+L++IWK EK + + +KEEIEKV+L+I K R+ V++L+YG
Sbjct: 444 EQEITRLEKEYADLDEIWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE LK + + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 504 KLPGLEGKLKAATDAEASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQDEA+ VS+AIRRSR+GL+D +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLKMEDRLHNRVVGQDEAVRLVSDAIRRSRAGLADENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMVGEPQEAVKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EV+ +FRPEF+NRID+++VF L++KNI SIA IQL L+ +L +M+M L++S+ A
Sbjct: 742 AVWQEVRTHFRPEFLNRIDEVVVFHALDQKNIESIARIQLQRLQGRLARMDMTLEVSELA 801
Query: 671 LKKISNIGFDLIYGAR 686
L+KI++ G+D ++GAR
Sbjct: 802 LEKIASAGYDPVFGAR 817
>gi|121595501|ref|YP_987397.1| ATPase [Acidovorax sp. JS42]
gi|120607581|gb|ABM43321.1| ATPase AAA-2 domain protein [Acidovorax sp. JS42]
Length = 867
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/691 (64%), Positives = 576/691 (83%), Gaps = 8/691 (1%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+ SL G+ + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRR
Sbjct: 128 GVTRKSLEAAIDAVRGGQKVDSAEAEGQREALKKYTLDLTERARQGKLDPVIGRDDEIRR 187
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
IQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRI+ GEVP +L +K++L+LD+A LLAG
Sbjct: 188 VIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVEGEVPETLKNKRVLVLDMAGLLAGA 247
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRGEFE+RLK +LKE+++ + II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELH
Sbjct: 248 KYRGEFEERLKSVLKEVAHEEGRIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELH 307
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
CIGATTL+EYR+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGLQ +YE HHGV+ITDPA
Sbjct: 308 CIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLQVRYEAHHGVDITDPA 367
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS+RYI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE MDKLERR+IQLKIE EA+
Sbjct: 368 IVAAAELSHRYITDRFLPDKAIDLIDEAAAKIKIEIDSKPESMDKLERRMIQLKIEREAM 427
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
K+E DE+S+KRL LI++E+ +E +YA+LE++WK EK + S+QI+++I+ +R +I+
Sbjct: 428 KKETDEASQKRLQLIEEELGNVEREYADLEEVWKAEKASAQGSEQIRKDIDAIRTQIDDL 487
Query: 356 TRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRT 415
RK D+ V++L+YG L +LE+ LKE +D + K LL+T+VG+EEIAE+VSR
Sbjct: 488 KRKGDFNKVAELQYGTLPELEKRLKEA--QDSEAGGTGTKHKLLRTQVGAEEIAEVVSRA 545
Query: 416 TGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMF 475
TGIPV+K++Q E++KLL++E L +RVVGQDEAISAV+NAIRRSRSGLSD RP GSF+F
Sbjct: 546 TGIPVAKMMQGEKDKLLHMEEKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPLGSFLF 605
Query: 476 LGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLT 535
LGPTGVGKTELCK L+ +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLT
Sbjct: 606 LGPTGVGKTELCKALAGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLT 665
Query: 536 EIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSD 595
E VRRKPYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS
Sbjct: 666 EAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSH 725
Query: 596 KIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKN 655
I+ M D E IK AV E+K +FRPEF+NRID+ +VF L+ K+I +IA IQL +L+
Sbjct: 726 LIQAMVGQDAEDIKEAVWGELKGHFRPEFLNRIDETVVFHGLDAKHIEAIARIQLRLLEA 785
Query: 656 KLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+L KM++ L++S AA+ +++ +GFD ++GAR
Sbjct: 786 RLAKMDLTLQVSPAAMGELAKVGFDPVFGAR 816
>gi|334131884|ref|ZP_08505646.1| Chaperone protein ClpB [Methyloversatilis universalis FAM5]
gi|333443357|gb|EGK71322.1| Chaperone protein ClpB [Methyloversatilis universalis FAM5]
Length = 861
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/676 (66%), Positives = 567/676 (83%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ S + E LKKY IDLTE+A GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 145 GGSSVGSAEAEGAREALKKYCIDLTERAAAGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L+LD+A LLAG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNEEVPETLKGKRVLVLDMAGLLAGAKFRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ II+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 EVAKDEGRIILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S +RL LI
Sbjct: 385 FLPDKAIDLIDEAAARIKMEIDSKPESMDKLDRRLIQLKIEREAVKKEKDEASIRRLGLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI+KL +Y++LE+IWK EK + S IKEEIEKVR+++ RK + +++L+YG
Sbjct: 445 EEEIDKLHKEYSDLEEIWKAEKAQVVGSAHIKEEIEKVRVQMADLQRKGQFDKLAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE LK+ + P N LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 505 RLPQLEAQLKQAEKSGDVKPQN----KLLRTEVGAEEIAEVVSRATGIPVSKMMQGERDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQDEA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCKTL
Sbjct: 561 LLKMEDRLHQRVIGQDEAVRLVSDAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKTL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPYS+IL DE
Sbjct: 621 AEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYSVILFDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++KL
Sbjct: 681 VEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGSDYGVVKL 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+EVK +FRPEFINRID+++VF L+ +NI SIA IQL L+ +L K++M L++S AA
Sbjct: 741 AVMSEVKTFFRPEFINRIDEVVVFHALDERNIQSIAKIQLAYLEKRLAKLDMGLQVSDAA 800
Query: 671 LKKISNIGFDLIYGAR 686
L ++ GFD ++GAR
Sbjct: 801 LSELGKAGFDPVFGAR 816
>gi|171058702|ref|YP_001791051.1| ATP-dependent chaperone ClpB [Leptothrix cholodnii SP-6]
gi|170776147|gb|ACB34286.1| ATP-dependent chaperone ClpB [Leptothrix cholodnii SP-6]
Length = 865
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/676 (66%), Positives = 562/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + + + E LKKYT+DLTE+AR+GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 144 GGATVDNAEAEGQREALKKYTLDLTERARMGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEYR+Y+E
Sbjct: 264 EVAADEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYRKYVE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E T++ILRGLQ+KYEVHHGV+ITDPAI+AA+ELS+RY++DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATVAILRGLQEKYEVHHGVQITDPAIIAAAELSHRYVTDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIE+DSKPE MDKL+RRLIQLKIE EA+++E DE S +R LI
Sbjct: 384 FLPDKAIDLIDEAAAKIKIEMDSKPESMDKLDRRLIQLKIEREAVRKEKDEGSVRRFGLI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KLE + A+LE+IWK EK + S+Q EEIE RL+I + RK D+ V++L+YG
Sbjct: 444 EEEIAKLEREAADLEEIWKAEKAAAQGSKQFMEEIESARLQIEEFKRKGDFNRVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L + K+ LL+T VG+EEIAE+VSR TGIPV+K++Q ER+K
Sbjct: 504 KLPELEKKLHDAQAKEAGKAKGGQGPQLLRTVVGAEEIAEVVSRATGIPVAKLMQGERDK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 564 LLQMEGKLHDRVVGQSEAIIAVSNAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTELCKAL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++++ +IRIDMSEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPYS++LLDE
Sbjct: 624 AGFLFDSDDHMIRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYSVLLLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I +M D E+I+
Sbjct: 684 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHQIMQMAGQDTELIRE 743
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+ +VF L++K+I +IA IQL L +L KM M L++S A
Sbjct: 744 AVWAEVKQHFRPEFLNRIDEAVVFHALDQKHIEAIAQIQLKALAARLGKMEMTLEVSPEA 803
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 804 LAELAKVGFDPVFGAR 819
>gi|160900639|ref|YP_001566221.1| ATP-dependent chaperone ClpB [Delftia acidovorans SPH-1]
gi|333913063|ref|YP_004486795.1| ATP-dependent chaperone ClpB [Delftia sp. Cs1-4]
gi|160366223|gb|ABX37836.1| ATP-dependent chaperone ClpB [Delftia acidovorans SPH-1]
gi|333743263|gb|AEF88440.1| ATP-dependent chaperone ClpB [Delftia sp. Cs1-4]
Length = 870
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/676 (66%), Positives = 572/676 (84%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYT+DLTE+AR+GKLDPVIGRDDEIRR+IQVLQRRSKNNPVL
Sbjct: 146 GGQTMDSAEGEGQREALKKYTMDLTERARIGKLDPVIGRDDEIRRSIQVLQRRSKNNPVL 205
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRG+FE+RLK +LK
Sbjct: 206 IGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLSLDMAGLLAGAKYRGDFEERLKSVLK 265
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 266 EVAQEEGRIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 325
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGLQ +YE HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 326 KDAALERRFQKVLVEEPSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHRYITDR 385
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE+MDKLERR+IQLKIE EA+K+E DE+S+KRL LI
Sbjct: 386 FLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLERRMIQLKIEREAMKKEKDEASQKRLQLI 445
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ LE +YA+LE++WK EK + S+QI++EI+++R++I + RK D+ V++L+YG
Sbjct: 446 EEELGSLEREYADLEEVWKSEKASAQGSEQIRKEIDQIRIQIEELKRKGDFNKVAELQYG 505
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L E +Q + Q A LL+T VG+EEIAE+VSR TGIPV+K++Q E++K
Sbjct: 506 KLPSLEKQLNE-AQANEQGQGGAPAHRLLRTHVGAEEIAEVVSRATGIPVAKMMQGEKDK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQDEAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 565 LLRMEDRLHDRVVGQDEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 625 AGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + +K
Sbjct: 685 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSLLIQAMVGEDYDDVKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ KNI SIA IQL +L+ +L KM++ L++S A
Sbjct: 745 AVWGELKNHFRPEFLNRIDETVVFHALDAKNIESIARIQLKLLERRLEKMDLALQVSDQA 804
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 805 LAELAKVGFDPVFGAR 820
>gi|257094822|ref|YP_003168463.1| ATP-dependent chaperone ClpB [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047346|gb|ACV36534.1| ATP-dependent chaperone ClpB [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 859
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/678 (64%), Positives = 571/678 (84%), Gaps = 8/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + +Q+ E L KY IDLTE+ARLGKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 145 GGQAVDNQEAEGQRQSLSKYCIDLTERARLGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L KK++ LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKGKKVMSLDMAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ + II+FIDELHTM+G GK EG+IDAGNMLKP L+RG+LHC+GATTL+EYR+YIE
Sbjct: 265 EIAQEEGQIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGDLHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E TI+ILRGL+++YE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPTVESTIAILRGLRERYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RR+IQLKIE EA+++E D++SKKR+ LI
Sbjct: 385 FLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRMIQLKIEREAVRKERDDASKKRMHLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KLE +Y +L+++WK EK+ ++ S IKEEI+K++L++ + R++ W V++++YG
Sbjct: 445 EEELVKLEREYNDLDEVWKAEKSQVQGSAHIKEEIDKLKLELAQLQRENKWDKVAEIQYG 504
Query: 371 ELNKLERIL--KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
+L +LE L EKS + LL+T+VG+EEIAE+VSR TGIPVSK++Q ER
Sbjct: 505 KLPQLEAQLTVAEKS------GDGGQHNKLLRTEVGTEEIAEVVSRATGIPVSKMMQGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
EKLL +E + +RVVGQDEA+ V+NAIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK
Sbjct: 559 EKLLQMEERMHQRVVGQDEAVRLVANAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++EE +IR+DMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEEHLIRVDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFN+LLQ+LDDGR+TD GRT++F+NT++VMTSNLGS I++M D ++I
Sbjct: 679 DEVEKAHPDVFNVLLQVLDDGRMTDGHGRTVDFKNTVVVMTSNLGSQMIQQMAGDDYQLI 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
KLAVM EVK YFRPEFINRID+++VF L+ ++I +IA IQL L+ +L ++ + L+++
Sbjct: 739 KLAVMGEVKTYFRPEFINRIDEVVVFHALDEQHIKAIARIQLAYLEKRLAQLELRLEVAD 798
Query: 669 AALKKISNIGFDLIYGAR 686
+AL +++ GFD +YGAR
Sbjct: 799 SALAEVATAGFDPVYGAR 816
>gi|383759106|ref|YP_005438091.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rubrivivax
gelatinosus IL144]
gi|381379775|dbj|BAL96592.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rubrivivax
gelatinosus IL144]
Length = 864
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/676 (65%), Positives = 566/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 144 GGQKVDSPEAEGQREALKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKDKRVLSLDMAGLLAGAKYRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S ++ II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+Y+E
Sbjct: 264 EVSADEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYVE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E T++ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATVAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE MD+L+RR+IQLKIE EA+K+E DE+S++RL LI
Sbjct: 384 FLPDKAIDLIDEAAAKIKIEIDSKPEAMDRLDRRMIQLKIEREAVKKEQDEASQRRLGLI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL+ +Y +LE+IW EK + S Q+KEEI++++ +I + RK D+ V++L+YG
Sbjct: 444 EDELLKLQREYNDLEEIWTAEKAQAQGSAQVKEEIDRIKFQIEELKRKGDFNRVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +L++ LKE K+ LL+T VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 504 KLPELDKRLKEAQAKEAGKAKGGQGPQLLRTMVGAEEIAEVVSRATGIPVSKLMQGERDK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAISAV++AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 564 LLQMEAKLHERVVGQDEAISAVADAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTELCKAL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E+ +IR+DMSE++EKHS+SRLIGAPPGY+GY+EGG LTE VRRKPYS++LLDE
Sbjct: 624 ASFLFDSEDHMIRVDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRKPYSVLLLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I +M E+++
Sbjct: 684 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMSGQPNEVVRE 743
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+ +VF L+ K+I +IA IQL L+ +L K+ M L++S AA
Sbjct: 744 AVWAEVKSHFRPEFLNRIDETVVFHALDEKHIENIARIQLKALEARLEKLEMKLEVSPAA 803
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 804 LAELAKVGFDPVFGAR 819
>gi|71908340|ref|YP_285927.1| ATPase AAA [Dechloromonas aromatica RCB]
gi|71847961|gb|AAZ47457.1| AAA ATPase, central region:Clp, N terminal [Dechloromonas aromatica
RCB]
Length = 863
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 566/676 (83%), Gaps = 3/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ+ E LKKY IDLTE+A GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 145 GGQGVDSQEAEGQRESLKKYCIDLTERAAQGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L KK+L+LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNEEVPETLKGKKVLVLDMAGLLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEYR+YIE
Sbjct: 265 EVAQDEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVESTIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+SKKR LI
Sbjct: 385 FLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKEKDEASKKRFGLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL +Y++LE++WK EK+ + S QIKEEI+ ++ I + R+ V++L+YG
Sbjct: 445 EEEIAKLTKEYSDLEEVWKAEKSAVLGSAQIKEEIDHLKADIARLQREGKLGEVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK ++K + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 505 KLPQLEAQLK-AAEKAGEGEGRKNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRVVGQDEA+ V +AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLNMEDRLHKRVVGQDEAVRLVGDAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 622 AEFMFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D +IK+
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYGVIKV 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK YFRPEFINRID+++VF L+ K+I IA IQL L+ +L ++ M + + +A
Sbjct: 742 AVMAEVKNYFRPEFINRIDEVVVFHALDEKHIAGIAKIQLGYLEKRLAQLEMGIVVEDSA 801
Query: 671 LKKISNIGFDLIYGAR 686
L +++ GFD ++GAR
Sbjct: 802 LAELAQAGFDPVFGAR 817
>gi|300691677|ref|YP_003752672.1| chaperone [Ralstonia solanacearum PSI07]
gi|299078737|emb|CBJ51397.1| Chaperone [Ralstonia solanacearum PSI07]
gi|344169981|emb|CCA82355.1| chaperone [blood disease bacterium R229]
Length = 862
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/676 (66%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAGARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+LE+IWK EK + + +KEEI+K RL+I K R+ V++L+YG
Sbjct: 444 EQEIERLQKEYADLEEIWKAEKGAAQGAAALKEEIDKTRLEIAKLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 504 KLPELEGKLKAATAAEASGQTQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G+SD +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGISDENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQMIQQMATEPLDVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L++ +I SIA IQL L +L M++ L+I+ AA
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHALDQTHIESIARIQLQRLAARLAHMDLTLEITDAA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ G+D ++GAR
Sbjct: 802 VAKLASAGYDPVFGAR 817
>gi|344171531|emb|CCA84146.1| chaperone [Ralstonia syzygii R24]
Length = 862
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/676 (65%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAGARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+LE+IWK EK + + +KEEI+K RL+I K R+ V++L+YG
Sbjct: 444 EQEIERLQKEYADLEEIWKAEKGAAQGAAALKEEIDKTRLEIAKLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 504 KLPELEGKLKAATAAEASGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G+SD +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGISDENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQMIQQMATEPLDVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L++ +I SIA IQL L +L M++ L+I+ AA
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHALDQTHIESIARIQLQRLAARLAHMDLTLEITDAA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ G+D ++GAR
Sbjct: 802 VAKLASAGYDPVFGAR 817
>gi|167562511|ref|ZP_02355427.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
oklahomensis EO147]
Length = 865
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 568/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSADAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +YA+LE+IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG
Sbjct: 445 EEEIRRLEREYADLEEIWTAEKAAVQGSAQLKEEIDKVRADITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE K+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEARHKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDTEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQAMSGSSQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L +S++A
Sbjct: 745 AVWGEVKQHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLARLHERLAKLDMALDVSESA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LERIGKVGYDPLFGAR 820
>gi|421888400|ref|ZP_16319495.1| Chaperone [Ralstonia solanacearum K60-1]
gi|378966210|emb|CCF96243.1| Chaperone [Ralstonia solanacearum K60-1]
Length = 862
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/676 (65%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K +L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKHVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+LE+IWK EK + + +KEEI+KV+L+I + R+ V++L+YG
Sbjct: 444 EQEIERLQKEYADLEEIWKAEKGAAQGAAAVKEEIDKVKLEITRLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 504 KLPELEGKLKAATAAEASGQKSPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M ++IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMAGESFDVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L++ NI SIA IQL L +L M++ L +S A
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLTLDVSDEA 801
Query: 671 LKKISNIGFDLIYGAR 686
L K++++G+D ++GAR
Sbjct: 802 LAKLASVGYDPVFGAR 817
>gi|398804069|ref|ZP_10563072.1| ATP-dependent chaperone ClpB [Polaromonas sp. CF318]
gi|398095077|gb|EJL85427.1| ATP-dependent chaperone ClpB [Polaromonas sp. CF318]
Length = 866
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/676 (65%), Positives = 567/676 (83%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E LKKY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQGVNSADAEGQREALKKYCMDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP+SL K++L LD+A LLAG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERLKTVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ+KYE HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPTVEATIAILRGLQEKYEAHHGVQITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DE+S+KR LI
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRREKDEASQKRFELI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL+ + ++L++IW+ EK S+ + EEI+++R +I + TRK D+ V++L+YG
Sbjct: 443 EEEIAKLQKEISDLDEIWQAEKAQALGSKDVMEEIDRIRFQIEEFTRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ LKE +Q +N TLL+T+VG+EEIAE+V+R TGIPVSK++Q ER+K
Sbjct: 503 KLPELEKRLKE-AQDSEASKGKSNAPTLLRTQVGAEEIAEVVARATGIPVSKLMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAISAV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 562 LLQMEGKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEDHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGKPTEEIKD 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV +E+K YFRPEF+NRID+ +VF L+ KNI SIA IQL +L +L KM++ L +S+AA
Sbjct: 742 AVTDELKNYFRPEFLNRIDETVVFHALDAKNIESIARIQLKVLIARLQKMDLTLDVSEAA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ +++ +GFD ++GAR
Sbjct: 802 IAELAKVGFDPVFGAR 817
>gi|167569691|ref|ZP_02362565.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
oklahomensis C6786]
Length = 865
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 568/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S E LKKYT+DLTE+AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGSQVHSADAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +YA+LE+IW EK ++ S Q+KEEI+KVR I + R+ + V++L+YG
Sbjct: 445 EEEIRRLEREYADLEEIWTAEKAAVQGSAQLKEEIDKVRADITRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE K+ +Q + +N + LL+T+VG+EEIAE+VSR TGIPVS+++Q EREK
Sbjct: 505 KLPQLEARHKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL+IE L +RVVGQ+EAI AV++AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 625 AGFLFDTEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +E IK
Sbjct: 685 IEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQAMSGSSQEEIKD 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRIDD++VF L+R NI SIA IQL L +L K++M L +S++A
Sbjct: 745 AVWGEVKQHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLARLHERLAKLDMALDVSESA 804
Query: 671 LKKISNIGFDLIYGAR 686
L++I +G+D ++GAR
Sbjct: 805 LEQIGKVGYDPLFGAR 820
>gi|89900705|ref|YP_523176.1| ATPase [Rhodoferax ferrireducens T118]
gi|89345442|gb|ABD69645.1| ATPase AAA-2 [Rhodoferax ferrireducens T118]
Length = 870
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/679 (65%), Positives = 565/679 (83%), Gaps = 3/679 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S E+ LKKY IDLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQNVDSADAEDQRESLKKYCIDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP+SL K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMASLLAGAKFRGEFEERLKNVLK 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 263 DLAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E+TI+ILRGLQ KYE HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPTVEDTIAILRGLQAKYETHHGVQITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DE+S+KR LI
Sbjct: 383 FLPDKAIDLIDEAASKIKIELDSKPEVMDKLDRRLIQLQIEREAVRREKDEASQKRFGLI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ + A+L++IWK EK + S+ I EEIEKVR +I + TRK D+ +L+YG
Sbjct: 443 EEEIVRLQKEIADLDEIWKAEKAQAQGSKAIMEEIEKVRFQIEELTRKGDFNRAGELQYG 502
Query: 371 ELNKLERILKEKSQKD---IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+L LE+ LK+ ++ + + + LL+T VG+EEIAE+VSR TGIPVSK++Q E
Sbjct: 503 KLPGLEKQLKDAQDQEAGRAKTAKDGGRAQLLRTMVGAEEIAEVVSRATGIPVSKMMQGE 562
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E L +RVVGQDEAI+AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 563 RDKLLLMEAKLHQRVVGQDEAITAVANAIRRSRAGLSDPNRPTGSFLFLGPTGVGKTELC 622
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L
Sbjct: 623 KALAGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLL 682
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
LDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D E
Sbjct: 683 LDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQMIQSMVGQDSED 742
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AV E+K YFRPEF+NRID+ +VF L+ +I IA IQ+ +L+ +L KM + L++S
Sbjct: 743 IKDAVTAELKNYFRPEFLNRIDETVVFHALDASHIAKIAAIQIQVLQERLAKMELTLEVS 802
Query: 668 KAALKKISNIGFDLIYGAR 686
AAL +++ +GFD ++GAR
Sbjct: 803 PAALAELAKVGFDPVFGAR 821
>gi|17546054|ref|NP_519456.1| ATP-dependent protease [Ralstonia solanacearum GMI1000]
gi|54035873|sp|Q8XZR0.1|CLPB_RALSO RecName: Full=Chaperone protein ClpB
gi|17428350|emb|CAD15037.1| probable chaperone clpb protein [Ralstonia solanacearum GMI1000]
Length = 862
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/676 (65%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+LE+IWK EK + + +KEEI++V+L+I + R+ V++L+YG
Sbjct: 444 EQEIERLQKEYADLEEIWKAEKGAAQGAAAVKEEIDRVKLEIARLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE LK + + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 504 RLPELEGKLKAATAAEASGQRPPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK
Sbjct: 682 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMASESPDVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L++ +I SIA IQL L +L M++ L+IS A
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHALDQGHIESIARIQLQRLAARLAHMDLTLEISDPA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ G+D ++GAR
Sbjct: 802 VAKLASAGYDPVFGAR 817
>gi|430807090|ref|ZP_19434205.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
sp. HMR-1]
gi|429500631|gb|EKZ98994.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
sp. HMR-1]
Length = 862
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/676 (65%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGDTVNSADAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEYR+YIE
Sbjct: 264 DVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HH VEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHKVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASRKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +YA+L++IW+ EK + + +KEEIEK++L I + R+ V++L+YG
Sbjct: 444 EQEIIRLEKEYADLDEIWRAEKGAAQGAAALKEEIEKIKLDITRLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L+ ++ + NK LL+T+VG+EEIAE+VSR TGIPV+K++Q EREK
Sbjct: 504 KLPELEGKLQAATKAEASEQKQQNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+GLSD +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLKMEDRLHQRVVGQDEAVRLVSDAIRRSRAGLSDENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
S +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPY++ILLDE
Sbjct: 622 SEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYAVILLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHIIQSMAGEPQEAVKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EV+ +FRPEF+NRID+++VF L++KNI SIA IQL L+ +L +M+M L +S+ A
Sbjct: 742 AVWQEVRTHFRPEFLNRIDEVVVFHALDQKNIESIAKIQLKRLQVRLARMDMTLDVSERA 801
Query: 671 LKKISNIGFDLIYGAR 686
L+KI++ G+D ++GAR
Sbjct: 802 LEKIASAGYDPVFGAR 817
>gi|94310897|ref|YP_584107.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
metallidurans CH34]
gi|93354749|gb|ABF08838.1| ATP-dependent Clp protease, ATP-binding subunit ClpB (protein
disaggregation chaperone) [Cupriavidus metallidurans
CH34]
Length = 862
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/676 (65%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGDTVNSADAESQREALKKYTVDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEYR+YIE
Sbjct: 264 DVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HH VEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHKVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASRKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +YA+L++IW+ EK + + +KEEIEK++L I + R+ V++L+YG
Sbjct: 444 EQEIIRLEKEYADLDEIWRAEKGAAQGAAALKEEIEKIKLDITRLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE L+ ++ + NK LL+T+VG+EEIAE+VSR TGIPV+K++Q EREK
Sbjct: 504 KLPELEGKLQAATKAEASEQKQQNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+GLSD +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLKMEDRLHQRVVGQDEAVRLVSDAIRRSRAGLSDENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
S +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPY++ILLDE
Sbjct: 622 SEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYAVILLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M +E +K
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHIIQSMAGEPQEAVKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EV+ +FRPEF+NRID+++VF L++KNI SIA IQL L+ +L +M+M L +S+ A
Sbjct: 742 AVWQEVRTHFRPEFLNRIDEVVVFHALDQKNIESIAKIQLKRLQVRLARMDMTLDVSERA 801
Query: 671 LKKISNIGFDLIYGAR 686
L+KI++ G+D ++GAR
Sbjct: 802 LEKIASAGYDPVFGAR 817
>gi|386333685|ref|YP_006029855.1| chaperone [Ralstonia solanacearum Po82]
gi|334196134|gb|AEG69319.1| chaperone [Ralstonia solanacearum Po82]
Length = 862
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/676 (65%), Positives = 566/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+LE+IWK EK + + +KEEI+KV+L+I + R+ V++L+YG
Sbjct: 444 EQEIERLQKEYADLEEIWKAEKGAAQGAAAVKEEIDKVKLEITRLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE LK + + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 504 RLPELEGKLKAATAAEASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M ++IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMAGESFDVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L++ NI SIA IQL L +L M++ L+IS A
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLTLEISDEA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ G+D ++GAR
Sbjct: 802 VAKLASAGYDPVFGAR 817
>gi|375105822|ref|ZP_09752083.1| ATP-dependent chaperone ClpB [Burkholderiales bacterium JOSHI_001]
gi|374666553|gb|EHR71338.1| ATP-dependent chaperone ClpB [Burkholderiales bacterium JOSHI_001]
Length = 862
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/676 (66%), Positives = 569/676 (84%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGATVDSAESEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP +L K++L+LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPETLKDKRVLVLDMAGLLAGAKYRGEFEERLKAVLK 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEYR+Y+E
Sbjct: 263 EVAQDEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEYRKYVE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKVMVDEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE+MD+L+RR+IQLKIE EA+K+E DE+S+KRL L+
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEIDSKPEVMDRLDRRMIQLKIEREAVKKERDEASQKRLGLL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +Y +LE+IWK EK + S Q+KEEI++ R +I + RK ++ V++L+YG
Sbjct: 443 EEELLKLQREYNDLEQIWKAEKATAQGSAQVKEEIDRSRFQIEEYKRKGNFDKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE+ LKE K+ A LL+T VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 503 RLPELEKRLKEAQAKEAGKKGGAAP-QLLRTMVGAEEIAEVVSRATGIPVSKLMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEAI+AVS+AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLKMEDKLHERVVGQDEAITAVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IR+DMSE++EKHS+SR+IGAPPGY+GY+EGG LTE VRRKPYS+ILLDE
Sbjct: 622 ANFLFDSEDHLIRVDMSEYMEKHSVSRMIGAPPGYVGYDEGGALTEAVRRKPYSVILLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT++VMTSNLGS +I +M E I+
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVVVMTSNLGSHQIMQMVGQSSEDIRD 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+ +VF L++KNI SIA IQL IL+ +L +M M L++S A
Sbjct: 742 AVWAEVKEHFRPEFLNRIDETVVFHALDQKNIESIARIQLRILEQRLARMEMKLEVSAEA 801
Query: 671 LKKISNIGFDLIYGAR 686
L +I+ +GFD ++GAR
Sbjct: 802 LAEIAKVGFDPVFGAR 817
>gi|300704290|ref|YP_003745893.1| chaperone [Ralstonia solanacearum CFBP2957]
gi|299071954|emb|CBJ43284.1| Chaperone [Ralstonia solanacearum CFBP2957]
Length = 862
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/676 (65%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+LE+IWK EK + + +KEEI+KV+L+I + R+ V++L+YG
Sbjct: 444 EQEIERLQKEYADLEEIWKAEKGAAQGAATVKEEIDKVKLEITRLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + NK LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+K
Sbjct: 504 KLPELEGKLKAATAAEASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G+SD +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGISDENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M ++IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMVGESFDVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L++ NI SIA IQL L +L M++ L+IS A
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLTLEISDEA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ G+D ++GAR
Sbjct: 802 VAKLASAGYDPVFGAR 817
>gi|83748548|ref|ZP_00945568.1| ClpB protein [Ralstonia solanacearum UW551]
gi|207743315|ref|YP_002259707.1| chaperone clpb protein [Ralstonia solanacearum IPO1609]
gi|83724756|gb|EAP71914.1| ClpB protein [Ralstonia solanacearum UW551]
gi|206594712|emb|CAQ61639.1| chaperone clpb protein [Ralstonia solanacearum IPO1609]
Length = 862
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/676 (65%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+LE+IWK EK + + +KEEI+KV+L+I + R+ V++L+YG
Sbjct: 444 EQEIERLQKEYADLEEIWKAEKGAAQGAATVKEEIDKVKLEITRLQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + NK LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 504 KLPELEGKLKAATAAEASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M ++IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMAGESFDVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L++ NI SIA IQL L +L M++ L+IS A
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLMLEISDEA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ G+D ++GAR
Sbjct: 802 VAKLASAGYDPVFGAR 817
>gi|121610528|ref|YP_998335.1| ATPase [Verminephrobacter eiseniae EF01-2]
gi|121555168|gb|ABM59317.1| ATPase AAA-2 domain protein [Verminephrobacter eiseniae EF01-2]
Length = 867
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/676 (64%), Positives = 568/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E G L KY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQKVDSAEAEGQRGALAKYCLDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL K++L LD+A LLAG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERLKAVLT 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ +Q I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDQGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP +E +I+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 323 KDAALERRFQKILVDEPTVEASIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQ++IE EA++RE DE+S+KRL LI
Sbjct: 383 FLPDKAIDLIDEAASKIKIEMDSKPEVMDKLDRRLIQVQIEREAVRREKDEASQKRLALI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ + A+ ++IW+ EK + S Q++E I+K+R +I + TRK D+ V++L+YG
Sbjct: 443 EEEITRLQKEIADYDEIWQAEKAQAQGSAQLREAIDKLRFQIEEFTRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L++ ++ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++K
Sbjct: 503 QLPALEKQLRQAQAQEAGKDGAPATRRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI+AV+NAIRRSRSGLSD +RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLQMEARLHQRVVGQDEAIAAVANAIRRSRSGLSDPQRPSGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 623 AGFLFDSEDHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
++KA+ DVFN+LLQ+LDDGRLTD++GRT++F+NT+IVMTSN+GS I+ M D + IK
Sbjct: 683 VDKAHPDVFNVLLQVLDDGRLTDSQGRTVDFKNTVIVMTSNIGSPLIQAMVGQDPQDIKD 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ ++I SIA IQL L+++L KM++ L++S AA
Sbjct: 743 AVWGELKNHFRPEFLNRIDETVVFHALDAQHIASIARIQLQSLQSRLAKMDLQLQVSDAA 802
Query: 671 LKKISNIGFDLIYGAR 686
+ +++ +GFD ++GAR
Sbjct: 803 VAELAKVGFDPVFGAR 818
>gi|351731245|ref|ZP_08948936.1| ATPase [Acidovorax radicis N35]
Length = 868
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/677 (65%), Positives = 571/677 (84%), Gaps = 2/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E G L KY +DLTE+AR+GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQKMDSAEAEGQRGALAKYCMDLTERARIGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLS 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DESS+KR LI
Sbjct: 383 FLPDKAIDLIDEAASKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRREKDESSQKRFALI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL+ + A+ ++IW+ EK + S ++E I+K++ +I + TRK D+ V++L+YG
Sbjct: 443 EEEITKLQKEIADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKE-KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L LER LKE ++Q+D + A + LL+T+VG+EEIAE+VSR TGIPV+K++Q E++
Sbjct: 503 KLPDLERQLKEAQAQEDGKDGAPAAR-RLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKD 561
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E L +RVVGQ EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 562 KLLQMETKLHERVVGQQEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKA 621
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLD
Sbjct: 622 LAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLD 681
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D E IK
Sbjct: 682 EVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDSEDIK 741
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AV E+K +FRPEF+NRID+ +VF L+ ++I SIA IQL +L+ +L KM+++L++S A
Sbjct: 742 EAVWGELKNHFRPEFLNRIDETVVFHALDAQHIASIAKIQLQLLQTRLAKMDLELQVSDA 801
Query: 670 ALKKISNIGFDLIYGAR 686
AL +++ +GFD ++GAR
Sbjct: 802 ALAELAKVGFDPVFGAR 818
>gi|337280035|ref|YP_004619507.1| heat shock protein [Ramlibacter tataouinensis TTB310]
gi|334731112|gb|AEG93488.1| Candidate heat shock protein [Ramlibacter tataouinensis TTB310]
Length = 874
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/676 (65%), Positives = 566/676 (83%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ S + E LKKY +DLTE+ARLGKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGSSVNSAEAEGQREALKKYCLDLTERARLGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLT 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ+KYE HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPTVEATIAILRGLQEKYEAHHGVDITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIEIDSKPE +D+L+RR+IQL+IE EA+++E DE+S+KRL LI
Sbjct: 383 FLPDKAIDLIDEAASKIKIEIDSKPEAIDRLDRRMIQLQIEREAMRKETDEASQKRLALI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI KL + A+LE IWK EK + S QI+EE+++VR +I + RK+D+ V++L+YG
Sbjct: 443 EDEIAKLRKEIADLEDIWKAEKAAAQGSAQIREEMDRVRFQIEEFKRKADFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LER LKE +Q A K LL+T+VG+EEIAE+V+R TGIPVSK++Q EREK
Sbjct: 503 RLPELERKLKE-AQDAEAGKAKAGKAQLLRTQVGAEEIAEVVARATGIPVSKLMQGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI+AV+NAIRRSRSGL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 562 LLQMEERLHQRVVGQDEAIAAVANAIRRSRSGLADPNRPTGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 622 ATFLFDSEEHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E +K
Sbjct: 682 VEKAHHDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHMIQAMVGRPYEDVKE 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV +E+K +FRPEF+NRID+ +VF L+ +I IA IQL +L+ +L KM++ L++S+AA
Sbjct: 742 AVWDELKNHFRPEFLNRIDETVVFHGLHAAHIARIARIQLGVLEQRLAKMDLTLQVSEAA 801
Query: 671 LKKISNIGFDLIYGAR 686
L++++ +GFD ++GAR
Sbjct: 802 LEELAKVGFDPVFGAR 817
>gi|237748625|ref|ZP_04579105.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes OXCC13]
gi|229379987|gb|EEO30078.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes OXCC13]
Length = 864
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/678 (67%), Positives = 577/678 (85%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN + Q++ LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNSADAEGQRE-----ALKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+N EVP SL K++L LD+A LLAG K+RGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNDEVPESLKGKRVLALDMAALLAGAKFRGEFEERLKAV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L E++ ++ I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y
Sbjct: 263 LNELAKDEGQDIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQKI+V+EP +E+TI+ILRGLQ+KYE+HHGVEITDPAI+AA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKIMVDEPTVEDTIAILRGLQEKYELHHGVEITDPAIIAAAELSQRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+S KRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDEASLKRLA 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI++EINKLE +YA+ ++I K EK ++ S+ IKEEIEKVRL++++A R+ D+Q +S+L
Sbjct: 443 LIEEEINKLEKEYADYDEILKAEKAGVEGSKHIKEEIEKVRLEMDEAKRRGDFQKMSELM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YG+L +LE+ L QK+ +L + K LL+T V +EEIAE+VSR TGIPVSK++Q ER
Sbjct: 503 YGKLPELEKALAADDQKETKLETDHPK--LLRTHVDAEEIAEVVSRATGIPVSKMMQGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL++E+ L KRVVGQ EAI AVS AIRRSR+GLSD RPYGSFMFLGPTGVGKTELCK
Sbjct: 561 DKLLHMEDYLHKRVVGQHEAIVAVSEAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L++ +F+ E+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALASFLFDTEDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M +++++
Sbjct: 681 DEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHLIQSMTGSEQDLV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K+AVM+EV+ +FRPEFINR+D+I+VF L+ KNI +IA IQL +L +L KM M L +S+
Sbjct: 741 KVAVMDEVRKHFRPEFINRVDEIVVFHALDEKNIGAIAKIQLELLNKRLEKMEMSLDVSE 800
Query: 669 AALKKISNIGFDLIYGAR 686
AL KI+ GFD ++GAR
Sbjct: 801 KALHKIAEAGFDPLFGAR 818
>gi|187928299|ref|YP_001898786.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12J]
gi|187725189|gb|ACD26354.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12J]
Length = 862
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/676 (65%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEMARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGQTILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+L++IWK EK + + +KEEI+K++L+I K R+ + V++L+YG
Sbjct: 444 EQEIERLQKEYADLDEIWKAEKGAAQGAAALKEEIDKIKLEITKLQREGKLEKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + NK LL+T+VG+EEIAE+VSR TGIPV+K++ EREK
Sbjct: 504 KLPELEGKLKAATAAESAGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMTGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLKMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMATEPADVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L+++NI SIA IQL L +L M++ L+IS A
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHALDQRNIESIARIQLKRLSARLAHMDLALEISDEA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ G+D ++GAR
Sbjct: 802 VAKLASAGYDPVFGAR 817
>gi|299067390|emb|CBJ38589.1| Chaperone [Ralstonia solanacearum CMR15]
Length = 862
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/676 (65%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGQTILFIDEIHTMVGAGKAEGALDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+LE+IWK EK + + +KEEI++V+L+I + R+ V++L+YG
Sbjct: 444 EQEIERLQKEYADLEEIWKAEKGAAQGAAAVKEEIDRVKLEIARQQREGKLDKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE LK + + NK LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+K
Sbjct: 504 RLPELEGKLKAATAAEASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK
Sbjct: 682 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMASEPPDVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L++ +I SIA IQL L +L M++ L+IS A
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHALDQDHIESIARIQLQRLAARLAHMDLMLEISDPA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ G+D ++GAR
Sbjct: 802 VAKLASAGYDPVFGAR 817
>gi|260219645|emb|CBA26490.1| Chaperone protein clpB [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 863
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/676 (65%), Positives = 561/676 (82%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E+ LKKY IDLTE+AR+GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQKVDSSDAEDQRESLKKYCIDLTERARMGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP+SL K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVEGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERLKNVLK 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 DLAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGL+++YEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPTVEATIAILRGLKERYEVHHGVDITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA+K+E DE+S KR LI
Sbjct: 383 FLPDKAIDLIDEAASKIKIELDSKPEVMDKLDRRLIQLQIEREAVKKEKDEASLKRFELI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EIN L+ + A+L++IWK EK + S Q++EEI+K+R +I TRK D V++L+YG
Sbjct: 443 NEEINSLQKEIADLDEIWKAEKATAQGSAQVREEIDKLRTQIESLTRKGDLAKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ LKE ++ LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+K
Sbjct: 503 KLPELEKRLKEAQDQEAGKAAAGGANRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQ+EAI+AVSNAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLQMEGKLRDRVVGQEEAIAAVSNAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY+++LLDE
Sbjct: 623 AGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYAVLLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D E +K
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQLIQSMVGQDYEDVKE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ NI SIA IQL L +L KM++ L +S AA
Sbjct: 743 AVTGELKNHFRPEFLNRIDETVVFHSLDAANIASIAKIQLATLMARLAKMDLTLAVSDAA 802
Query: 671 LKKISNIGFDLIYGAR 686
+ +++ +GFD ++GAR
Sbjct: 803 VAELAKVGFDPVFGAR 818
>gi|347821362|ref|ZP_08874796.1| ATPase [Verminephrobacter aporrectodeae subsp. tuberculatae At4]
Length = 869
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/676 (65%), Positives = 563/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E G L KY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQKMDSAEAEGQRGALTKYCMDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIE+DSKPE MD+L+RRLIQL+IE EA++RE DESS+KR LI
Sbjct: 383 FLPDKAIDLIDEAASKIKIEMDSKPEAMDRLDRRLIQLQIEREAVRREKDESSQKRFALI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL+ + A+ ++IW+ EK + S Q++E I+K+R +I + TRK D+ V++L+YG
Sbjct: 443 EQEITKLQKEIADYDEIWQAEKAQAQGSAQVREAIDKLRFQIEEFTRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ LK+ ++ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++K
Sbjct: 503 KLPELEKQLKQAQAQEAGKDGVPAARRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLQMEARLHERVVGQDEAIAAVANAIRRSRSGLSDPSRPTGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGG+LTE VRRKPYS++LLDE
Sbjct: 623 AGFLFDGEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGHLTEAVRRKPYSVLLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M D + IK
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQAMVGQDPDDIKE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E++ FRPEF+NRID+ ++F L+ ++I SIA IQL L+++L KM++DL++S AA
Sbjct: 743 AVWGELRARFRPEFLNRIDETVLFHALDAQHIASIARIQLQGLQSRLAKMDLDLQVSDAA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 803 LAELAKVGFDPVFGAR 818
>gi|365093659|ref|ZP_09330720.1| ATPase [Acidovorax sp. NO-1]
gi|363414143|gb|EHL21297.1| ATPase [Acidovorax sp. NO-1]
Length = 868
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/676 (64%), Positives = 565/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E G L KY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQKMDSAEAEGQRGALAKYCLDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DESS+KR LI
Sbjct: 383 FLPDKAIDLIDEAASKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDESSQKRFALI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL+ + A+ ++IW+ EK + S ++E I+K++ +I + TRK D+ V++L+YG
Sbjct: 443 EEEITKLQKEIADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ LKE ++ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++K
Sbjct: 503 KLPDLEKQLKEAQAQEAGKDGAPATRRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQ EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLQMEAKLHERVVGQQEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 623 AGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + IK
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDSDDIKE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ ++I SIA IQL +L+ +L KM+++L++S AA
Sbjct: 743 AVWGELKNHFRPEFLNRIDETVVFHALDAQHIASIAKIQLQLLQTRLAKMDLELQVSDAA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 803 LAELAKVGFDPVFGAR 818
>gi|372488803|ref|YP_005028368.1| ATP-dependent chaperone ClpB [Dechlorosoma suillum PS]
gi|359355356|gb|AEV26527.1| ATP-dependent chaperone ClpB [Dechlorosoma suillum PS]
Length = 861
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/678 (65%), Positives = 569/678 (83%), Gaps = 7/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ+ E LKKY +DLTE+A GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 145 GGQGVDSQEAEGQRESLKKYCVDLTERAAQGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L KK+L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPETLKGKKVLVLDMAGLLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ II+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDEGRIILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+SKKR LI
Sbjct: 385 FLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKEKDEASKKRFGLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI KL+ +Y++LE++WK EK + + +KEEI+K++ +I + R+ + V++L+YG
Sbjct: 445 EDEIAKLQKEYSDLEEVWKAEKAQVHGAAHVKEEIDKIKAEIARLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
+L +LE LK EK+ + Q N LL+T+VG+EEIAE+VSR TGIPVSK++Q ER
Sbjct: 505 KLPQLEAQLKVAEKASEGGQQQNK-----LLRTQVGAEEIAEVVSRATGIPVSKMMQGER 559
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L +RVVGQDEA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK
Sbjct: 560 DKLLKMEDRLHQRVVGQDEAVRLVSDAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCK 619
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGG LTE VRRKPYS+ILL
Sbjct: 620 ALAEFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGTLTEAVRRKPYSVILL 679
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++I
Sbjct: 680 DEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGDDYQLI 739
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
KLAVM EVK YFRPEFINRID+ +VF L+ KNI +IA IQL L+ ++ ++ M L+++
Sbjct: 740 KLAVMGEVKSYFRPEFINRIDEAVVFHSLDEKNIRNIARIQLGYLEKRVAQLEMRLEVAD 799
Query: 669 AALKKISNIGFDLIYGAR 686
+AL +++ GFD I+GAR
Sbjct: 800 SALDELAKAGFDPIFGAR 817
>gi|398808737|ref|ZP_10567597.1| ATP-dependent chaperone ClpB [Variovorax sp. CF313]
gi|398087089|gb|EJL77687.1| ATP-dependent chaperone ClpB [Variovorax sp. CF313]
Length = 873
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/676 (65%), Positives = 565/676 (83%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E LKKY +DLTE+ARLGKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQGVNSADAEGQREALKKYCLDLTERARLGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL K++L LD+A LLAG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERLKTVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKI+V EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 323 KDAALERRFQKIIVGEPSVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KRL LI
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRLGLI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI KL+ + A+ ++IW+ EK + S Q++E+++K++ +I + RK D+ V++L+YG
Sbjct: 443 EGEIEKLQKEIADYDEIWQAEKAQAQGSAQVREDVDKIKFQIEEWKRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ LKE + ++ TLL+T+VGSEEIAE+V+R TGIPV+K++Q ER+K
Sbjct: 503 QLPALEKRLKEAEASEAS-KGKSSAPTLLRTQVGSEEIAEVVARATGIPVAKLMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEAI AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 562 LLVMEDKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQAMVGKPSEEIKE 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV +E+K YFRPEF+NRID+ +VF L+ KNI SIA IQL +L+ +L KM++ L++S AA
Sbjct: 742 AVWDELKNYFRPEFLNRIDETVVFHALDAKNIESIAAIQLKVLQARLAKMDLGLEVSPAA 801
Query: 671 LKKISNIGFDLIYGAR 686
L +I+ +GFD ++GAR
Sbjct: 802 LAEIAKVGFDPVFGAR 817
>gi|445497963|ref|ZP_21464818.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Janthinobacterium sp. HH01]
gi|444787958|gb|ELX09506.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Janthinobacterium sp. HH01]
Length = 862
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/660 (68%), Positives = 565/660 (85%), Gaps = 1/660 (0%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKYTLDLTERARSGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+N EVP+SL K++L LD+A L+AG KYRGEFE+RLK +LKE++ ++ I+FIDE+
Sbjct: 221 QRIVNNEVPDSLKGKRVLSLDMAALVAGAKYRGEFEERLKSVLKELAMDEGQTIVFIDEM 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKILV+E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E TI+ILRGLQ KYE+HH V I+D AI+AA+ELS+RYI+DRF+PDKAIDLIDEAA+K
Sbjct: 341 PSVEATIAILRGLQDKYELHHKVAISDAAIIAAAELSHRYITDRFLPDKAIDLIDEAASK 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
IKIEIDSKPE+MDKLERRLIQLKIE EA+K+E DE S++RL LI +EI +L+ + + E+
Sbjct: 401 IKIEIDSKPEVMDKLERRLIQLKIEKEAVKKEKDEGSRRRLDLIDEEILRLQRELNDYEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
I K EK +++ S IKEEIE+++L++ +ATR S+WQ VS+L+YG L +LE LK+ +
Sbjct: 461 ILKAEKAVVQGSTHIKEEIERIKLQMEQATRDSNWQRVSELQYGRLPELEAQLKQAESVN 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
++ A K LL+T+VG+EEIAE+VSR TGIPVS+++Q ER+KLL+IE L +RVVGQD
Sbjct: 521 LK-AGEAAKPKLLRTEVGAEEIAEVVSRATGIPVSRMMQGERDKLLHIEEKLHERVVGQD 579
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EAI+AVS+AIRRSR+GLSD RPYGSFMFLGPTGVGKTEL K L+ +F+ EES+IRIDM
Sbjct: 580 EAIAAVSDAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTELTKALAGFLFDTEESMIRIDM 639
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ L
Sbjct: 640 SEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQAL 699
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 626
DDGR+TD +GRT++F+NT+I+MTSNLGS KI+ ME D ++KLAVM EV+ +FRPEFIN
Sbjct: 700 DDGRMTDGQGRTVDFKNTVIIMTSNLGSHKIQAMEDSDPGVVKLAVMAEVRSHFRPEFIN 759
Query: 627 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
RID+I+VF L+ KNI +IA IQL IL+ +L KM M L I++AAL KI+ G+D +YGAR
Sbjct: 760 RIDEIVVFHGLDEKNIGAIAKIQLAILEQRLAKMEMTLTITEAALHKIAEAGYDPVYGAR 819
>gi|241766421|ref|ZP_04764297.1| ATP-dependent chaperone ClpB [Acidovorax delafieldii 2AN]
gi|241363400|gb|EER58901.1| ATP-dependent chaperone ClpB [Acidovorax delafieldii 2AN]
Length = 868
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/676 (65%), Positives = 566/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + + E LKKY IDLTE+AR+GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQKMDNPEAEGQREALKKYCIDLTERARIGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERLKTVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPTVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIEIDSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR LI
Sbjct: 383 FLPDKAIDLIDEAASKIKIEIDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI L+ + A+L++IW+ EK + SQQ++E++E+V+ +I + RK D+ V++L+YG
Sbjct: 443 EEEIASLQKEIADLDEIWQSEKAQAQGSQQVREQVEQVKQQIEELKRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ LKE K+ + LL+T+VG+EEIAE+VSR TGIPV+K++Q E++K
Sbjct: 503 KLPDLEKQLKEAQAKEEGKDGTSAPNRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQ+EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLQMETKLHERVVGQEEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 623 AGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + IK
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDSDDIKE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ +I +IA IQL +L+++L KM++ L +S AA
Sbjct: 743 AVWGELKNHFRPEFLNRIDETVVFHALDAAHIEAIARIQLQLLESRLAKMDLALDVSPAA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 803 LAELAKVGFDPVFGAR 818
>gi|319792779|ref|YP_004154419.1| ATP-dependent chaperone clpb [Variovorax paradoxus EPS]
gi|315595242|gb|ADU36308.1| ATP-dependent chaperone ClpB [Variovorax paradoxus EPS]
Length = 873
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/676 (65%), Positives = 565/676 (83%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E LKKYT+DLTE+ARLGKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQGVNSADAEGQREALKKYTMDLTERARLGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP+SL K++L LD+A LLAG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMASLLAGAKFRGEFEERLKTVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKI+V EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 323 KDAALERRFQKIIVGEPSVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR LI
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI KL+ + A+ ++IW+ EK + S I+EEIEK++ +I + RK D+ +++L+YG
Sbjct: 443 EDEIAKLQKEIADYDEIWQAEKAQAQGSAHIREEIEKLKTEIKEWERKGDFNKLAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ LKE + ++ TLL+T+VG+EEIAE+V+R TGIPV+K++Q ER+K
Sbjct: 503 QLPALEKRLKEAEASEAS-KGKSSAPTLLRTQVGAEEIAEVVARATGIPVAKLMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEAI AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 562 LLVMEDKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQAMVGKPSEEIKE 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV +E+K YFRPEF+NRID+ +VF L+ KNI SIA IQL +LK +L KM++ L++S AA
Sbjct: 742 AVWDELKNYFRPEFLNRIDETVVFHALDAKNIESIAAIQLKVLKARLAKMDLGLEVSPAA 801
Query: 671 LKKISNIGFDLIYGAR 686
L +I+ +GFD ++GAR
Sbjct: 802 LAEIAKVGFDPVFGAR 817
>gi|332529046|ref|ZP_08405011.1| ATPase [Hylemonella gracilis ATCC 19624]
gi|332041490|gb|EGI77851.1| ATPase [Hylemonella gracilis ATCC 19624]
Length = 874
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/661 (67%), Positives = 562/661 (85%), Gaps = 1/661 (0%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
LKKYT+DLT +AR GKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 160 LKKYTLDLTARARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 219
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP SL K++L+LD+A LLAG K+RGEFE+RLK +LKE++ ++ II+FIDE+
Sbjct: 220 QRIVNGEVPESLRDKRVLVLDMAGLLAGAKFRGEFEERLKAVLKEVAQDEGRIILFIDEI 279
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 280 HTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVEE 339
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAAK
Sbjct: 340 PTVEQTIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK 399
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
IKIEIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+S+KRL LI++EI KL+ + A+LE+
Sbjct: 400 IKIEIDSKPEVMDKLDRRMIQLKIEREAMKKETDEASQKRLALIEEEIGKLQKEAADLEE 459
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK + Q ++EEIEK++ +I + TRK D+ V++L+YG+L +LE+ L E +
Sbjct: 460 IWKLEKAQAQGGQHLREEIEKLKGQIEELTRKGDFNRVAELQYGKLPELEKRLNEVQASE 519
Query: 387 IQLPNNANKFT-LLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQ 445
+K LL+T VG+EEIAE+VSR TGIPV+K++Q E++KLL +E+ L +RVVGQ
Sbjct: 520 AAGAGGGSKTPRLLRTLVGAEEIAEVVSRATGIPVAKMMQGEKDKLLRMEDKLHERVVGQ 579
Query: 446 DEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRID 505
+EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L+ +F++ + ++RID
Sbjct: 580 EEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSVDHLVRID 639
Query: 506 MSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQI 565
MSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN+LLQ+
Sbjct: 640 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQV 699
Query: 566 LDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFI 625
LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + +K AV E+K YFRPEF+
Sbjct: 700 LDDGRLTDGQGRTVDFKNTVIVMTSNIGSQLIQNMAGRSYDDVKDAVWGELKNYFRPEFL 759
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+ +VF L+ NI SIA IQL L+++L+KM + L +S AL +++ +GFD ++GA
Sbjct: 760 NRVDETVVFHGLDAANIASIAKIQLQALQDRLVKMELSLHVSDKALAELAKVGFDPVFGA 819
Query: 686 R 686
R
Sbjct: 820 R 820
>gi|302879019|ref|YP_003847583.1| ATP-dependent chaperone ClpB [Gallionella capsiferriformans ES-2]
gi|302581808|gb|ADL55819.1| ATP-dependent chaperone ClpB [Gallionella capsiferriformans ES-2]
Length = 861
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/676 (67%), Positives = 573/676 (84%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ SQ+ E LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGESVGSQEAEGQRESLKKYTVDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +KK+L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKKVLSLDMAALLAGAKYRGEFEERLKNVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAMDEGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGL+++YE+HHGV+ITDPAI+AA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVESTIAILRGLRERYELHHGVDITDPAIIAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA++++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+SKKR LI
Sbjct: 385 FLPDKAIDLIDEAAARVRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASKKRHALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL +YA+LE+IWK EK + + Q+KEEI++VR +I + R+ + V++L+YG
Sbjct: 445 EEEIAKLSREYADLEEIWKAEKGAAQGTAQLKEEIDRVRAEIVRLQREGKLEKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +E LKE +Q++ + + NK LL+T+VG+EEIAE+VSR TGIPVSK++ ER+K
Sbjct: 505 QLPMMEAKLKEAAQREAEGGVSKNK--LLRTQVGAEEIAEVVSRATGIPVSKMMTGERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 563 LLKMEDKLHERVVGQDEAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSE++EKHS++RLIGAPPGY+GYEEGG LTE VRRKPYS+ILLDE
Sbjct: 623 AGFMFDSEDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGGLTEAVRRKPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D ++IKL
Sbjct: 683 VEKAHPDVFNVLLQALDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKL 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK YFRPEFINRID+++VF L+ KNI SIA IQL L+ +L M M L +S++A
Sbjct: 743 AVMGEVKTYFRPEFINRIDEVVVFHALDEKNIKSIAGIQLQYLEKRLAAMEMKLAVSESA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +I+ GFD +YGAR
Sbjct: 803 LAEIATAGFDPVYGAR 818
>gi|237745846|ref|ZP_04576326.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes HOxBLS]
gi|229377197|gb|EEO27288.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes HOxBLS]
Length = 864
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/678 (66%), Positives = 577/678 (85%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN + Q++ LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNSADAEGQRE-----ALKKYTMDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+N EVP SL K++L LD+A LLAG K+RGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNNEVPESLKGKRVLALDMAALLAGAKFRGEFEERLKAV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L E++ ++ I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y
Sbjct: 263 LNELAKDEGQDIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQKI+V+EP +E+TI+ILRGLQ+KYEVHHGVEI+DPAI+AA+ELS+RYI+
Sbjct: 323 IEKDAALERRFQKIMVDEPSVEDTIAILRGLQEKYEVHHGVEISDPAIIAAAELSHRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+EIDSKPE+MD+L+RR+IQLKIE EA+K+E DE+S+KRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDEASRKRLA 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
L+++EI KLE +YA+ ++I K EK ++ S+ IKEEIEK+RL+I +A R+ D+Q +S+L
Sbjct: 443 LLEEEIAKLEKEYADYDEILKAEKAGVEGSKHIKEEIEKIRLQIEEAKRRGDYQKMSELM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YG L +LE+ L ++ KD +L + + LL+T+V +EEIAE+VSR TGIPVSK++Q ER
Sbjct: 503 YGRLPELEKALAMENDKDARLEHAHPR--LLRTEVDAEEIAEVVSRATGIPVSKMMQGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL++E+ L KRVVGQ EAI AVS AIRRSR+GLSD RPYGSFMFLGPTGVGKTELCK
Sbjct: 561 DKLLHMEDELHKRVVGQHEAIVAVSEAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F+ E+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDTEDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I+ M D+ ++
Sbjct: 681 DEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMGGSDQGLV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K+AVM EV+ +FRPEFINR+D+I+VF L+ KNI +IA IQL ++ +L KM+M +++S
Sbjct: 741 KMAVMEEVRKHFRPEFINRVDEIVVFHALDEKNIGAIARIQLELVNRRLQKMDMSMEVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL KI+ GFD ++GAR
Sbjct: 801 AALHKIAEAGFDPLFGAR 818
>gi|407940132|ref|YP_006855773.1| ATPase [Acidovorax sp. KKS102]
gi|407897926|gb|AFU47135.1| ATPase [Acidovorax sp. KKS102]
Length = 868
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/676 (64%), Positives = 567/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E G L KY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQKMDSAEAEGQRGALAKYCLDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA+++E DESS+KR LI
Sbjct: 383 FLPDKAIDLIDEAASKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRKEKDESSQKRFALI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ + A+ ++IW+ EK + S ++E I+K++ +I + TRK D+ V++L+YG
Sbjct: 443 EEEITRLQKEIADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ LKE ++ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++K
Sbjct: 503 KLPELEKQLKEAQAQEAGKDGAPAARRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQ+EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLQMEAKLHERVVGQNEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 623 AGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + IK
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDSDDIKE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ ++I SIA IQL +L+++L KM+++L++S AA
Sbjct: 743 AVWGELKNHFRPEFLNRIDETVVFHALDAQHIASIAKIQLQLLQSRLAKMDLELQVSDAA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD ++GAR
Sbjct: 803 LAELAKVGFDPVFGAR 818
>gi|241662872|ref|YP_002981232.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12D]
gi|240864899|gb|ACS62560.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12D]
Length = 862
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/676 (65%), Positives = 567/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEMARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNEEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGRTILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+L++IWK EK + + +KEEI+K++L+I K R+ + V++L+YG
Sbjct: 444 EQEIERLQKEYADLDEIWKAEKGAAQGAAALKEEIDKIKLEITKLQREGKLEKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + NK LL+T+VG+EEIAE+VSR TGIPV+K++ EREK
Sbjct: 504 KLPELEGKLKAATAAESAGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMTGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLKMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMATEPADVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L+++NI SIA IQL L +L +M++ L+IS A
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHALDQRNIESIARIQLKRLSARLAQMDLALEISDEA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ G+D ++GAR
Sbjct: 802 VAKLASAGYDPVFGAR 817
>gi|393778254|ref|ZP_10366533.1| ATP-dependent chaperone ClpB [Ralstonia sp. PBA]
gi|392714720|gb|EIZ02315.1| ATP-dependent chaperone ClpB [Ralstonia sp. PBA]
Length = 861
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/710 (62%), Positives = 582/710 (81%), Gaps = 11/710 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E LKKYTIDLTE+AR GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSADAESQREALKKYTIDLTERARSGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLS 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVEEPTVEATIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE+MD+L+RR+IQL+IE EA+K+E DE+S KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEVMDRLDRRVIQLQIEREAVKKETDEASMKRLDLI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+L++IW+ EK + + +KEEI++++L+I + R+ V++L+Y
Sbjct: 444 EQEIARLQKEYADLDEIWRAEKGAAQGTASLKEEIDRIKLEIVRLQREGKLDKVAELQYA 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + Q A + LL+T+VG+EEIAE+VSR TGIPV+K++ EREK
Sbjct: 504 KLPELEGKLKAANAAETQ---GATQNKLLRTQVGAEEIAEVVSRATGIPVAKMMTGEREK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 561 LLQMEDRLHQRVVGQDEAVRLVSDAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 621 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+ M E IK
Sbjct: 681 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIQAMTNEPYEAIKG 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L + +I +IA IQL L+++L KM+M L IS AA
Sbjct: 741 AVWQEVKEHFRPEFLNRIDEVVVFHALGQDHITNIARIQLQRLRDRLAKMDMSLDISDAA 800
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINK 720
L +++ G+D ++GAR + K+++ + H ++P + I G L+ K
Sbjct: 801 LTHLASAGYDPVFGARPL---KRAI-----QQHIENPLSRLILEGKLVPK 842
>gi|395003976|ref|ZP_10388065.1| ATP-dependent chaperone ClpB [Acidovorax sp. CF316]
gi|394318076|gb|EJE54546.1| ATP-dependent chaperone ClpB [Acidovorax sp. CF316]
Length = 869
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/676 (65%), Positives = 565/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E G L KY +DLTE+AR+GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQKMDSPEAEGQRGALAKYCLDLTERARIGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DESS KR LI
Sbjct: 383 FLPDKAIDLIDEAASKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRREKDESSVKRFGLI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ + A+ ++IW+ EK + S ++E I+K++ +I + TRK D+ V++L+YG
Sbjct: 443 EEEIVRLQKEIADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LER LKE K+ A+ LL+T+VG+EEIAE+VSR TGIPV+K++Q E++K
Sbjct: 503 KLPDLERQLKEAQAKEDGKDGVASAPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQ+EAI+AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLQMEGKLHERVVGQEEAITAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 623 AGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + IK
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDADDIKE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ KNI +IA IQL +L+ +L KM++ L+IS A
Sbjct: 743 AVWGELKNHFRPEFLNRIDETVVFHALDAKNIEAIARIQLQLLEARLAKMDLQLQISGPA 802
Query: 671 LKKISNIGFDLIYGAR 686
L++++ +GFD ++GAR
Sbjct: 803 LEELAKVGFDPVFGAR 818
>gi|224825048|ref|ZP_03698154.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania ferrooxidans 2002]
gi|224602719|gb|EEG08896.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania ferrooxidans 2002]
Length = 858
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/693 (65%), Positives = 576/693 (83%), Gaps = 13/693 (1%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G N+LN G N+ SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR
Sbjct: 130 GGSANALNAAIDAVRGGANVESQDAESQREALKKYTLDLTERARQGKLDPVIGRDDEIRR 189
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
AIQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL KK+L+LD+A LLAG
Sbjct: 190 AIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKHKKLLVLDLAALLAGA 249
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRG+FE+RLK +L +++ ++ + +IFIDE+HT++G GK EG++DAGNMLKP L+RGELH
Sbjct: 250 KYRGDFEERLKSVLSDLAKDEGNTLIFIDEIHTLVGAGKAEGAMDAGNMLKPALARGELH 309
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
C+GATTL+EYR+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGLQ+KYE+HHGV+ITDPA
Sbjct: 310 CLGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLQEKYEIHHGVDITDPA 369
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS+RYI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RRLIQLKIE EA+
Sbjct: 370 IVAAAELSHRYITDRFLPDKAIDLIDEAASRIKMELDSKPEEMDKLDRRLIQLKIEREAV 429
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
K+E DE+S+KRL LI+ EI++L +YA+LE+IWK EK + SQ IKEEI+++++++
Sbjct: 430 KKESDEASQKRLGLIEDEIDRLSREYADLEEIWKAEKATAQGSQSIKEEIDRLKVEMEDL 489
Query: 356 TRKSDWQTVSKLKYGELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVS 413
R+ DWQ +++L+YG+L +LE LK E + Q PN LL+T+VG+EEIAE+VS
Sbjct: 490 KRQGDWQKLAELQYGKLPQLEARLKEAEAAGAGTQKPNR-----LLRTQVGAEEIAEVVS 544
Query: 414 RTTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSF 473
R TGIPVSK++ EREKLL +E +L +R+VGQDEA+ AVS+AIRRSRSGLSD RPYGSF
Sbjct: 545 RMTGIPVSKMLAGEREKLLRMEEVLHERLVGQDEAVRAVSDAIRRSRSGLSDPNRPYGSF 604
Query: 474 MFLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGY 533
+FLGPTGVGKTELCKTL+ +F++E+ +IRIDMSE++EKHS++RLIGAPPGY+GYEEGG
Sbjct: 605 LFLGPTGVGKTELCKTLAGFLFDSEDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQ 664
Query: 534 LTEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLG 593
LTE VRRKPYS+ILLDE+EKA+ +VFNILLQ+LDDGRLTD +GRT++F+NT++VMTSN+G
Sbjct: 665 LTEQVRRKPYSVILLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFKNTVVVMTSNIG 724
Query: 594 SDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNIL 653
S I+ M D ++IKLAVM EVK YFRPEFINRID+++VF L I SIA IQL L
Sbjct: 725 SQHIQAMGSDDYQVIKLAVMAEVKGYFRPEFINRIDEVVVFHALGSAQIRSIARIQLKSL 784
Query: 654 KNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+ +L K+ + L+++ AAL I+ GFD +YGAR
Sbjct: 785 ERRLAKLELSLQVTDAALDAIAEAGFDPVYGAR 817
>gi|347539270|ref|YP_004846695.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania sp. NH8B]
gi|345642448|dbj|BAK76281.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania sp. NH8B]
Length = 858
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/693 (65%), Positives = 576/693 (83%), Gaps = 13/693 (1%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G N+LN G N+ SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR
Sbjct: 130 GGSANALNAAIDAVRGGANVESQDAESQREALKKYTLDLTERARQGKLDPVIGRDDEIRR 189
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
AIQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL KK+L+LD+A LLAG
Sbjct: 190 AIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKHKKLLVLDLAALLAGA 249
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRG+FE+RLK +L +++ ++ + +IFIDE+HT++G GK EG++DAGNMLKP L+RGELH
Sbjct: 250 KYRGDFEERLKSVLSDLAKDEGNTLIFIDEIHTLVGAGKAEGAMDAGNMLKPALARGELH 309
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
C+GATTL+EYR+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGLQ+KYE+HHGV+ITDPA
Sbjct: 310 CLGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLQEKYEIHHGVDITDPA 369
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS+RYI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RRLIQLKIE EA+
Sbjct: 370 IVAAAELSHRYITDRFLPDKAIDLIDEAASRIKMELDSKPEEMDKLDRRLIQLKIEREAV 429
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
K+E DE+S+KRL LI+ EI++L +YA+LE+IWK EK + SQ IKEEI+++++++
Sbjct: 430 KKESDEASQKRLGLIEDEIDRLSREYADLEEIWKAEKATAQGSQSIKEEIDRLKVEMEDL 489
Query: 356 TRKSDWQTVSKLKYGELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVS 413
R+ DWQ +++L+YG+L +LE LK E + Q PN LL+T+VG+EEIAE+VS
Sbjct: 490 KRQGDWQKLAELQYGKLPQLEARLKEAEAAGAGTQKPNR-----LLRTQVGAEEIAEVVS 544
Query: 414 RTTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSF 473
R TGIPVSK++ EREKLL +E ++ +R+VGQDEA+ AVS+AIRRSRSGLSD RPYGSF
Sbjct: 545 RMTGIPVSKMLAGEREKLLKMEEVMHERLVGQDEAVRAVSDAIRRSRSGLSDPNRPYGSF 604
Query: 474 MFLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGY 533
+FLGPTGVGKTELCKTL+ +F++E+ +IRIDMSE++EKHS++RLIGAPPGY+GYEEGG
Sbjct: 605 LFLGPTGVGKTELCKTLAGFLFDSEDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQ 664
Query: 534 LTEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLG 593
LTE VRRKPYS+ILLDE+EKA+ +VFNILLQ+LDDGRLTD +GRT++F+NT++VMTSN+G
Sbjct: 665 LTEQVRRKPYSVILLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFKNTVVVMTSNIG 724
Query: 594 SDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNIL 653
S I+ M D ++IKLAVM EVK YFRPEFINRID+++VF L I SIA IQL L
Sbjct: 725 SQHIQAMGSDDYQVIKLAVMAEVKGYFRPEFINRIDEVVVFHALGSAQIRSIARIQLKSL 784
Query: 654 KNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+ +L K+ + L+++ AAL I+ GFD +YGAR
Sbjct: 785 ERRLAKLELSLQVTDAALDAIAEAGFDPVYGAR 817
>gi|91788074|ref|YP_549026.1| ATPase [Polaromonas sp. JS666]
gi|91697299|gb|ABE44128.1| ATPase AAA-2 [Polaromonas sp. JS666]
Length = 866
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/676 (65%), Positives = 566/676 (83%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E LKKY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQGVNSADAEGQREALKKYCMDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP+SL K++L LD+A LLAG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERLKTVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVDEPTVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR LI
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI KL+ + ++L++IW+ EK S+ + EEI+++R +I + TRK D+ V++L+YG
Sbjct: 443 EVEIAKLQKEISDLDEIWQAEKAQALGSKDVMEEIDRIRFQIEEFTRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ LK + Q ++ LL+T+VG+EEIAE+V+R TGIPVSK++Q ER+K
Sbjct: 503 KLPELEKRLKAAQDTEAQ-KETSDVPKLLRTQVGAEEIAEVVARATGIPVSKLMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 562 LLLMEGKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGG+LTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEDHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGHLTEAVRRKPYSVLLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK
Sbjct: 682 IEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGQPAEDIKD 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV +E+K YFRPEF+NRID+ +VF L+ KNI SIA IQL +L +L KM++ +++S+AA
Sbjct: 742 AVTDELKNYFRPEFLNRIDETVVFHALDAKNIESIARIQLKVLMERLQKMDLAMEVSEAA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ +++ +GFD ++GAR
Sbjct: 802 IAELAKVGFDPVFGAR 817
>gi|309782202|ref|ZP_07676931.1| ATP-dependent chaperone protein ClpB [Ralstonia sp. 5_7_47FAA]
gi|404377897|ref|ZP_10982997.1| chaperone ClpB [Ralstonia sp. 5_2_56FAA]
gi|308918973|gb|EFP64641.1| ATP-dependent chaperone protein ClpB [Ralstonia sp. 5_7_47FAA]
gi|348616016|gb|EGY65522.1| chaperone ClpB [Ralstonia sp. 5_2_56FAA]
Length = 862
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/676 (65%), Positives = 566/676 (83%), Gaps = 2/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S + E LKKYTIDLTE AR+GKLDPVIGRDDEIRRAIQ+LQRR+KNNPVL
Sbjct: 144 GGQTVGSAEAESQREALKKYTIDLTEMARIGKLDPVIGRDDEIRRAIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP SL +K++L+LD+A LLAG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNEEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 DIAKEEGRTILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 384 FLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKRLELI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+L++IWK EK + + +KEEI+K++L+I K R+ + V++L+YG
Sbjct: 444 EQEIERLQKEYADLDEIWKAEKGAAQGAAALKEEIDKIKLEITKLQREGKLEKVAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + NK LL+T+VG+EEIAE+VSR TGIPV+K++ EREK
Sbjct: 504 KLPELEGKLKAATAAESAGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMTGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ VS+AIRRSR+G++D +PYGSF+FLGPTGVGKTELCK L
Sbjct: 562 LLKMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I++M ++IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMATEPADVIKG 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L+++NI SIA IQL L +L M++ L+IS A
Sbjct: 742 AVWQEVKTHFRPEFLNRIDEVVVFHALDQRNIESIARIQLKRLSARLAHMDLALEISDEA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ G+D ++GAR
Sbjct: 802 VAKLASAGYDPVFGAR 817
>gi|221068631|ref|ZP_03544736.1| ATP-dependent chaperone ClpB [Comamonas testosteroni KF-1]
gi|220713654|gb|EED69022.1| ATP-dependent chaperone ClpB [Comamonas testosteroni KF-1]
Length = 870
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/692 (64%), Positives = 584/692 (84%), Gaps = 9/692 (1%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+ +SL G+N+ S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRR
Sbjct: 131 GVSKSSLEAAINAVRGGQNVDSAEAEGQREALKKYTLDLTERARSGKLDPVIGRDDEIRR 190
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG
Sbjct: 191 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLQNKRVLSLDMAGLLAGA 250
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRG+FE+RLK +LKEI+ ++ II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELH
Sbjct: 251 KYRGDFEERLKSVLKEIAQDEGRIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELH 310
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
C+GATTL+EYR+YIEKDAA ERRFQK++V+EP +E+TI+ILRGLQ KYE HH V+ITDPA
Sbjct: 311 CVGATTLDEYRKYIEKDAALERRFQKVIVDEPSVEDTIAILRGLQVKYEAHHNVDITDPA 370
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS+RYI+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MDKLERR+IQLKIE EA+
Sbjct: 371 IVAAAELSHRYITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDKLERRMIQLKIEREAM 430
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
KRE DE+S+KRL LI++E+ LE +YA+LE+IWK EK S+QI++E++++R++I +
Sbjct: 431 KREKDEASQKRLQLIEEELESLEREYADLEEIWKAEKASALGSEQIRKEVDQLRIQIEEF 490
Query: 356 TRKSDWQTVSKLKYGELNKLERILKE-KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
RK D+ V++L+YG+L LE+ L E +++++ Q ANK LL+T+VG+EEIAE+VSR
Sbjct: 491 KRKGDFNKVAELQYGKLPALEKQLHEAQAKEEGQDGATANK--LLRTQVGAEEIAEVVSR 548
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q E++KLL++E+ L +RVVGQ+EAISAV+NAIRRSRSGLSD RP GSF+
Sbjct: 549 ATGIPVAKMMQGEKDKLLHMEDKLHERVVGQEEAISAVANAIRRSRSGLSDPNRPTGSFL 608
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTELCK L+ +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYL
Sbjct: 609 FLGPTGVGKTELCKALAGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 668
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS
Sbjct: 669 TEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGS 728
Query: 595 DKIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILK 654
I+ M D + +K AV E+K +FRPEF+NRID+ +VF L+ KNI +IA IQL +L+
Sbjct: 729 HLIQAMVGEDADDVKEAVWGELKNHFRPEFLNRIDETVVFHALDAKNIEAIARIQLKLLE 788
Query: 655 NKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
++L KM + +++S+ AL +++ +GFD ++GAR
Sbjct: 789 SRLQKMELSMQVSEQALAELAKVGFDPVFGAR 820
>gi|410693234|ref|YP_003623855.1| Chaperone clpB (Heat-shock protein F84.1) [Thiomonas sp. 3As]
gi|294339658|emb|CAZ88018.1| Chaperone clpB (Heat-shock protein F84.1) [Thiomonas sp. 3As]
Length = 861
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 565/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S + E LKKYTIDLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQNVNSAEAEGARESLKKYTIDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP+SL K++L+LDIALLLAG K+RGEFE+RLK +LK
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNDEVPDSLRGKRLLVLDIALLLAGAKFRGEFEERLKNVLK 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 263 ELSQDAGQTIVFIDEIHTMVGAGKGEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP +E+TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKVMVDEPSVEDTIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE MDKL+RR IQLKIE EA+KRE DE+S+KRL LI
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEIDSKPEAMDKLDRRRIQLKIEREAVKREKDEASQKRLALI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +YA+L++IWK EK ++ S IKEEI+K+R +I + RK D+ V++L+YG
Sbjct: 443 EEELAKLDREYADLDEIWKAEKAAVQGSAAIKEEIDKIRFEIEELKRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LER L E K+ + LL+T+VG+EEIAE+VSR TGIPVSK+VQ ER+K
Sbjct: 503 RLPELERKLHEAQAKETADGDQPQARRLLRTQVGAEEIAEVVSRATGIPVSKLVQGERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+++E L +RVVGQDEAI AVS+AIRRSR+GLSD +RPYGSF+FLGPTGVGKTEL K L
Sbjct: 563 LVHMEERLHRRVVGQDEAIRAVSDAIRRSRAGLSDPRRPYGSFLFLGPTGVGKTELTKGL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +E I+R+DMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS++L DE
Sbjct: 623 AEFLFDTDEHIVRLDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSVVLFDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I M ++ I+
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHQIMAMSGQPQQAIRD 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L K I IA IQL L+ +L +++M L +S A
Sbjct: 743 AVWEEVKAHFRPEFLNRIDEVVVFHALGEKEIADIARIQLRGLEGRLAQLDMRLDVSSEA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +I+ GFD ++GAR
Sbjct: 803 LAEIAREGFDPVFGAR 818
>gi|296135529|ref|YP_003642771.1| ATP-dependent chaperone ClpB [Thiomonas intermedia K12]
gi|295795651|gb|ADG30441.1| ATP-dependent chaperone ClpB [Thiomonas intermedia K12]
Length = 861
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/676 (66%), Positives = 565/676 (83%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S + E LKKYTIDLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQNVNSAEAEGARESLKKYTIDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP+SL K++L+LDIALLLAG K+RGEFE+RLK +LK
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNDEVPDSLRGKRLLVLDIALLLAGAKFRGEFEERLKNVLK 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 263 ELSQDAGQTIVFIDEIHTMVGAGKGEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP +E+TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKVMVDEPSVEDTIAILRGLQEKYEVHHGVEITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE MDKL+RR IQLKIE EA+KRE DE+S+KRL LI
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEIDSKPEAMDKLDRRRIQLKIEREAVKREKDEASQKRLALI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +YA+L++IWK EK ++ S IKEEI+K+R +I + RK D+ V++L+YG
Sbjct: 443 EEELAKLDREYADLDEIWKAEKAAVQGSAAIKEEIDKIRFEIEELKRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LER L E K+ + LL+T+VG+EEIAE+VSR TGIPVSK+VQ ER+K
Sbjct: 503 RLPELERKLHEAQAKETADGDQPQARRLLRTQVGAEEIAEVVSRATGIPVSKLVQGERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+++E L +RVVGQDEAI AVS+AIRRSR+GLSD +RPYGSF+FLGPTGVGKTEL K L
Sbjct: 563 LVHMEERLHRRVVGQDEAIRAVSDAIRRSRAGLSDPRRPYGSFLFLGPTGVGKTELTKGL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +E I+R+DMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS++L DE
Sbjct: 623 AEFLFDTDEHIVRLDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSVVLFDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I M ++ I+
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHQIMAMSGQPQQAIRD 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV EVK +FRPEF+NRID+++VF L K I IA IQL L+ +L +++M L +S A
Sbjct: 743 AVWEEVKAHFRPEFLNRIDEVVVFHALGEKEIADIARIQLRGLEGRLAQLDMRLDVSSEA 802
Query: 671 LKKISNIGFDLIYGAR 686
L +I+ GFD ++GAR
Sbjct: 803 LAEIAREGFDPVFGAR 818
>gi|299530720|ref|ZP_07044135.1| ATPase AAA-2 [Comamonas testosteroni S44]
gi|418530573|ref|ZP_13096496.1| ATPase AAA [Comamonas testosteroni ATCC 11996]
gi|298721236|gb|EFI62178.1| ATPase AAA-2 [Comamonas testosteroni S44]
gi|371452292|gb|EHN65321.1| ATPase AAA [Comamonas testosteroni ATCC 11996]
Length = 870
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/692 (64%), Positives = 583/692 (84%), Gaps = 9/692 (1%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+ +SL G+N+ S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRR
Sbjct: 131 GVSKSSLEAAINAVRGGQNVDSAEAEGQREALKKYTLDLTERARSGKLDPVIGRDDEIRR 190
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG
Sbjct: 191 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLQNKRVLSLDMAGLLAGA 250
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRG+FE+RLK +LKEI+ ++ II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELH
Sbjct: 251 KYRGDFEERLKSVLKEIAQDEGRIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELH 310
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
C+GATTL+EYR+YIEKDAA ERRFQK++V+EP +E+TI+ILRGLQ KYE HH V+ITDPA
Sbjct: 311 CVGATTLDEYRKYIEKDAALERRFQKVIVDEPSVEDTIAILRGLQVKYEAHHNVDITDPA 370
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS+RYI+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MDKLERR+IQLKIE EA+
Sbjct: 371 IVAAAELSHRYITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDKLERRMIQLKIEREAM 430
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
KRE DE+S+KRL LI++E+ LE +YA+LE+IWK EK S+QI++E++++R++I +
Sbjct: 431 KREKDEASQKRLQLIEEELESLEREYADLEEIWKAEKASALGSEQIRKEVDQLRIQIEEF 490
Query: 356 TRKSDWQTVSKLKYGELNKLERILKE-KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
RK D+ V++L+YG+L LE+ L E +++++ Q ANK LL+T+VG+EEIAE+VSR
Sbjct: 491 KRKGDFNKVAELQYGKLPALEKQLHEAQAKEEGQDGATANK--LLRTQVGAEEIAEVVSR 548
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q E++KLL++E L +RVVGQ+EAISAV+NAIRRSRSGLSD RP GSF+
Sbjct: 549 ATGIPVAKMMQGEKDKLLHMEGKLHERVVGQEEAISAVANAIRRSRSGLSDPNRPTGSFL 608
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTELCK L+ +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYL
Sbjct: 609 FLGPTGVGKTELCKALAGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 668
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS
Sbjct: 669 TEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGS 728
Query: 595 DKIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILK 654
I+ M D + +K AV E+K +FRPEF+NRID+ +VF L+ KNI +IA IQL +L+
Sbjct: 729 HLIQAMVGEDADDVKEAVWGELKNHFRPEFLNRIDETVVFHALDAKNIEAIARIQLKLLE 788
Query: 655 NKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
++L KM + +++S+ AL +++ +GFD ++GAR
Sbjct: 789 SRLQKMELSMQVSEQALAELAKVGFDPVFGAR 820
>gi|264677176|ref|YP_003277082.1| ATPase AAA [Comamonas testosteroni CNB-2]
gi|262207688|gb|ACY31786.1| ATPase AAA-2 [Comamonas testosteroni CNB-2]
Length = 877
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/692 (64%), Positives = 584/692 (84%), Gaps = 9/692 (1%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+ +SL G+N+ S + E LKKYT+DLTE+AR GKLDPVIGRDDEIRR
Sbjct: 138 GVSKSSLEAAINAVRGGQNVDSAEAEGQREALKKYTLDLTERARSGKLDPVIGRDDEIRR 197
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG
Sbjct: 198 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLQNKRVLSLDMAGLLAGA 257
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRG+FE+RLK +LKEI+ ++ II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELH
Sbjct: 258 KYRGDFEERLKSVLKEIAQDEGRIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELH 317
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
C+GATTL+EYR+YIEKDAA ERRFQK++V+EP +E+TI+ILRGLQ KYE HH V+ITDPA
Sbjct: 318 CVGATTLDEYRKYIEKDAALERRFQKVIVDEPSVEDTIAILRGLQVKYEAHHNVDITDPA 377
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS+RYI+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MDKLERR+IQLKIE EA+
Sbjct: 378 IVAAAELSHRYITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDKLERRMIQLKIEREAM 437
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
KRE DE+S+KRL LI++E+ LE +YA+LE+IWK EK S+QI++E++++R++I +
Sbjct: 438 KREKDEASQKRLQLIEEELESLEREYADLEEIWKAEKASALGSEQIRKEVDQLRIQIEEF 497
Query: 356 TRKSDWQTVSKLKYGELNKLERILKE-KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
RK D+ V++L+YG+L LE+ L E +++++ Q ANK LL+T+VG+EEIAE+VSR
Sbjct: 498 KRKGDFNKVAELQYGKLPALEKQLHEAQAKEEGQDGATANK--LLRTQVGAEEIAEVVSR 555
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q E++KLL++E+ L +RVVGQ+EAISAV+NAIRRSRSGLSD RP GSF+
Sbjct: 556 ATGIPVAKMMQGEKDKLLHMEDKLHERVVGQEEAISAVANAIRRSRSGLSDPNRPTGSFL 615
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTELCK L+ +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYL
Sbjct: 616 FLGPTGVGKTELCKALAGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 675
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS
Sbjct: 676 TEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGS 735
Query: 595 DKIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILK 654
I+ M D + +K AV E+K +FRPEF+NRID+ +VF L+ KNI +IA IQL +L+
Sbjct: 736 HLIQAMVGEDADDVKEAVWGELKNHFRPEFLNRIDETVVFHALDAKNIEAIARIQLKLLE 795
Query: 655 NKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
++L KM + +++S+ AL +++ +GFD ++GAR
Sbjct: 796 SRLQKMELSMQVSEQALAELAKVGFDPVFGAR 827
>gi|239814845|ref|YP_002943755.1| ATP-dependent chaperone ClpB [Variovorax paradoxus S110]
gi|239801422|gb|ACS18489.1| ATP-dependent chaperone ClpB [Variovorax paradoxus S110]
Length = 873
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/676 (65%), Positives = 565/676 (83%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E LKKY +DLTE+ARLGKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQGVNSADAEGQREALKKYCLDLTERARLGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL K++L LD+A LLAG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERLKTVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKI+V EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 323 KDAALERRFQKIIVGEPSVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR LI
Sbjct: 383 FLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI +L+ + A+ ++IW+ EK + S +I+E+I+K++ +I + RK D+ +++L+YG
Sbjct: 443 EDEIARLQKEIADYDEIWQAEKAQAQGSAKIREDIDKIKFEIEEWKRKGDFNKLAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L+E + + ++ TLL+T+VGSEEIAE+V+R TGIPV+K++Q ER+K
Sbjct: 503 QLPALEKRLREAEESEAS-KGKSSAPTLLRTQVGSEEIAEVVARATGIPVAKLMQGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEAI AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 562 LLVMEDKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK
Sbjct: 682 VEKAHHDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGQPAEEIKE 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV +E+K YFRPEF+NRID+ +VF L+ KNI SIA IQL +L+ +L KM++ L++S AA
Sbjct: 742 AVWDELKNYFRPEFLNRIDETVVFHALDAKNIESIAAIQLKVLQARLAKMDLGLEVSPAA 801
Query: 671 LKKISNIGFDLIYGAR 686
L +I+ +GFD ++GAR
Sbjct: 802 LAEIAKVGFDPVFGAR 817
>gi|456063699|ref|YP_007502669.1| ATPase [beta proteobacterium CB]
gi|455440996|gb|AGG33934.1| ATPase [beta proteobacterium CB]
Length = 864
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/677 (65%), Positives = 564/677 (83%), Gaps = 1/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ S E LKKYT+DLTE+AR+GKLDPVIGRDDEIRR IQ+LQRR KNNPVL
Sbjct: 145 GGESVNSADAEGQREALKKYTVDLTERARMGKLDPVIGRDDEIRRTIQILQRRGKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP +L +K++L+LD+ALLLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPETLKNKRVLVLDMALLLAGAKYRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ IIFIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DVAKDEGQTIIFIDEIHTMVGAGKGDGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++VEEP +E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDPALERRFQKVMVEEPSVEATIAILRGLQERYELHHGIEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA ++I++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAGSRIRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASQKRLSLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI +L +YA+LE+IWK EK + + +KEEIEKVR I K R+ + V++L+YG
Sbjct: 445 EDEIKRLGAEYADLEEIWKAEKGAVLGAAHLKEEIEKVRADIAKLQREGKLEQVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L +LE LK + + + + K LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+
Sbjct: 505 KLPELEAKLKSAAAAEAKGDKDGVVKNKLLRTQVGAEEIAEVVSRATGIPVSKMMQGERD 564
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL KRVVGQ+EAI AVS+AIRRSR+GL++ RPYGSF+FLGPTGVGKTELCK
Sbjct: 565 KLLKMEELLHKRVVGQEEAIRAVSDAIRRSRAGLAEENRPYGSFLFLGPTGVGKTELCKA 624
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+IL D
Sbjct: 625 LAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRHPYSVILFD 684
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
EIEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + IK
Sbjct: 685 EIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQSMTDKKQSEIK 744
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AV E+K +FRPEF+NRID+I+VF L++ NI +IA I L L ++L K++M +++S A
Sbjct: 745 DAVFEELKNHFRPEFLNRIDEIVVFHGLDKGNIANIAKILLKNLSDRLAKVDMQMEVSDA 804
Query: 670 ALKKISNIGFDLIYGAR 686
AL KI+ +GFD ++GAR
Sbjct: 805 ALSKIAEVGFDPVFGAR 821
>gi|301630819|ref|XP_002944514.1| PREDICTED: chaperone protein clpB-like, partial [Xenopus (Silurana)
tropicalis]
Length = 739
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/676 (65%), Positives = 574/676 (84%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S++ E LKKY +DLTE+AR+GKLDPVIGRDDEIRRAIQVLQRRSKNNPVL
Sbjct: 10 GGQKVDSREAEGQREALKKYCLDLTERARVGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 69
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 70 IGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLALDMAALLAGAKYRGEFEERLKTVLN 129
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 130 ELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 189
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP +E TI+ILRGL++KYE+HHGVEITDPAIVAA+ELS+RY++DR
Sbjct: 190 KDAALERRFQKILVDEPSVEATIAILRGLREKYELHHGVEITDPAIVAAAELSHRYVTDR 249
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAKIKIEIDSKPE +DKL+RRLIQL+IE EA+KRE DE+S+KRL LI
Sbjct: 250 FLPDKAIDLIDEAAAKIKIEIDSKPEAIDKLDRRLIQLQIEREAVKREKDEASQKRLQLI 309
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL+ + A+LE IWK EK + SQQ++E+IEKV+L+I + R+ D+ V++L+YG
Sbjct: 310 EEEITKLQREIADLEDIWKSEKAQAQGSQQVREQIEKVKLQIEELKRQGDFNKVAELQYG 369
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ LKE ++ + LL+T+VG+EEIAE+VSR TGIPVSK++Q E++K
Sbjct: 370 QLPELEKRLKEAQAQEEGQGGTVHAHRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEKDK 429
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E+ L +RV+GQDEAISAV++AIRRSR+GLSD +RP GSF+FLGPTGVGKTELCK L
Sbjct: 430 LLHMEDKLHERVIGQDEAISAVAHAIRRSRAGLSDPQRPTGSFLFLGPTGVGKTELCKAL 489
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY+++LLDE
Sbjct: 490 AGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYAVLLLDE 549
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M D + IK
Sbjct: 550 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMLGQDSDDIKE 609
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV E+K +FRPEF+NRID+ +VF L+ ++I +IA IQL +L+ +L ++ + L IS AA
Sbjct: 610 AVWGELKQHFRPEFLNRIDETVVFHGLDARHIAAIARIQLQLLQTRLARVELTLDISDAA 669
Query: 671 LKKISNIGFDLIYGAR 686
L++++ +GFD ++GAR
Sbjct: 670 LEELAKVGFDPVFGAR 685
>gi|121605125|ref|YP_982454.1| ATPase [Polaromonas naphthalenivorans CJ2]
gi|120594094|gb|ABM37533.1| ATPase AAA-2 domain protein [Polaromonas naphthalenivorans CJ2]
Length = 867
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/676 (64%), Positives = 564/676 (83%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S E LKKY +DLTE+ARLGKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 143 GGQNVNSADAEGQREALKKYCMDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP+SL K++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMAALVAGAKFRGEFEERLKTVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 ELAKEEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV EP +E TI+ILRGLQ+KYE HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 323 KDAALERRFQKILVGEPTVEATIAILRGLQEKYETHHGVQITDPAIVAAAELSHRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAAK+KIEIDSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR LI
Sbjct: 383 FLPDKAIDLIDEAAAKVKIEIDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL+ + +++++IW+ EK S+ + EEI+ + +I + TRK D+ V++L+YG
Sbjct: 443 EEEIGKLQKEISDMDEIWQAEKAQALGSKDVMEEIDTINTQIEEFTRKGDFNKVAELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +L++ LK+ +Q + +K LL+T+VG+EEIAE+VSR TGIPV+K++Q E++K
Sbjct: 503 KLPELKKRLKQ-AQDTEESKGVDDKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI AV+NAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 562 LLQMEGKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M E IK
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGQPYEEIKD 741
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV +E+K YFRPEF+NRID+ +VF L+ KNI SIA IQL +L +L KM++ L +S+AA
Sbjct: 742 AVTDELKNYFRPEFLNRIDETVVFHALDAKNIESIARIQLKVLLARLAKMDLVLDVSEAA 801
Query: 671 LKKISNIGFDLIYGAR 686
+ +++ +GFD ++GAR
Sbjct: 802 IGELAKVGFDPVFGAR 817
>gi|145588634|ref|YP_001155231.1| ATPase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047040|gb|ABP33667.1| ATPase AAA-2 domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 867
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/677 (64%), Positives = 562/677 (83%), Gaps = 1/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ S E LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR KNNPVL
Sbjct: 145 GGESVNSADAEGQREALKKYTVDLTERARAGKLDPVIGRDDEIRRTIQILQRRGKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L+LD+ALLLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLVLDMALLLAGAKYRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ IIFIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DVAKDEGQTIIFIDEIHTMVGAGKGDGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++VEEP +E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDPALERRFQKVMVEEPSVEATIAILRGLQERYELHHGIEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA ++I++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAGSRIRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASQKRLGLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI +L +YA+LE+IWK EK + + +KEEIEK+R I K R+ + V++L+Y
Sbjct: 445 EDEIKRLGAEYADLEEIWKAEKGAVLGAANLKEEIEKIRADIVKLQREGKLEQVAELQYS 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L +LE LK + + + N K LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+
Sbjct: 505 KLPELEAKLKSAAAAEAKGDKNGVVKNKLLRTQVGAEEIAEVVSRATGIPVSKMMQGERD 564
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL KRVVGQ+EAI AVS+AIRRSR+GL++ RPYGSF+FLGPTGVGKTELCK
Sbjct: 565 KLLKMEELLHKRVVGQEEAIRAVSDAIRRSRAGLAEENRPYGSFLFLGPTGVGKTELCKA 624
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+IL D
Sbjct: 625 LAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRHPYSVILFD 684
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
EIEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + IK
Sbjct: 685 EIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQSMVDKKQAEIK 744
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AV E+K +FRPEF+NRID+I+VF L++ NI +IA I L L ++L K++M L++S A
Sbjct: 745 EAVFEELKNHFRPEFLNRIDEIVVFHGLDKGNIANIAKILLKNLSDRLAKVDMQLEVSDA 804
Query: 670 ALKKISNIGFDLIYGAR 686
AL KI+ +GFD ++GAR
Sbjct: 805 ALSKIAEVGFDPVFGAR 821
>gi|114330749|ref|YP_746971.1| ATPase [Nitrosomonas eutropha C91]
gi|114307763|gb|ABI59006.1| ATPase AAA-2 domain protein [Nitrosomonas eutropha C91]
Length = 863
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/676 (66%), Positives = 566/676 (83%), Gaps = 1/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + E LKKYT+DLTE+AR GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEQVTDAEAEGSREALKKYTLDLTERARSGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKTVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++ I+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 265 ELAQDEGRTIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCVGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPGVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+I++E DSKPE+MDKL+RRLIQLKIE EA+K+E DE+SKKRL L+
Sbjct: 385 FLPDKAIDLIDEAAARIRMEQDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASKKRLALL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KLE +YA+L++I K EK+ K SQ+IKEE+EK+R + A RK D Q S+L YG
Sbjct: 445 EEEIEKLEREYADLDEILKAEKSRAKGSQEIKEELEKLRREEEAARRKGDLQKASELLYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE L E+ D + A + L +T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 505 RIPQLETQLAEQLHHD-ESAEEATQPKLFRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQDEA+ VS+AIRRSRSGLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 564 LLFMEDKLHERVIGQDEAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKAL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RRKPYS+ILLDE
Sbjct: 624 AGFLFDSEEHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQIRRKPYSVILLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS I++M D + IK
Sbjct: 684 VEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQAIKQ 743
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM EVK YFRPEFINRID+++VF L+ +I SIA IQL+ L +L +M M L +S++A
Sbjct: 744 AVMGEVKTYFRPEFINRIDEVVVFHSLDEAHIKSIAKIQLSNLGARLAQMEMKLVVSESA 803
Query: 671 LKKISNIGFDLIYGAR 686
L K++ GFD I+GAR
Sbjct: 804 LAKLAEAGFDPIFGAR 819
>gi|238022814|ref|ZP_04603240.1| hypothetical protein GCWU000324_02727 [Kingella oralis ATCC 51147]
gi|237866017|gb|EEP67153.1| hypothetical protein GCWU000324_02727 [Kingella oralis ATCC 51147]
Length = 858
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/683 (64%), Positives = 560/683 (81%), Gaps = 10/683 (1%)
Query: 5 NNSLNVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRS 64
N V+ N Q+D LKKYT DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+
Sbjct: 144 NQGQTVDNPNAEDQRD-----ALKKYTTDLTERAREGKLDPVIGRDDEIRRAIQVLQRRT 198
Query: 65 KNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDR 124
KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL K++L+LD+A L+AG KYRGEFE+R
Sbjct: 199 KNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKYRGEFEER 258
Query: 125 LKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNE 184
LK +L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+E
Sbjct: 259 LKAVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDE 318
Query: 185 YRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSY 244
YRQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS
Sbjct: 319 YRQYIEKDAALERRFQKVLVNEPSVEDTIAILRGLQERYEIHHGVDITDPAIVAAAELSN 378
Query: 245 RYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSK 304
RYI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RR+IQLK+E +++E DE+SK
Sbjct: 379 RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEQMDKLDRRIIQLKMERMHVEKESDEASK 438
Query: 305 KRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTV 364
KRL LI +EI LE +YA+L++IWK EK +K +I+ ++ +I +A R D+
Sbjct: 439 KRLTLIDEEIAGLEKEYADLDEIWKAEKASSVSMSDLKTQIDNLKTRIEQAKRAGDYGLA 498
Query: 365 SKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 424
S+L+YGEL KL LK+ + +N TL +T+VG+EEIAEIVSR TGIPVSK++
Sbjct: 499 SELEYGELPKLTLQLKDAERSGSLKKHN----TLFRTEVGAEEIAEIVSRMTGIPVSKMM 554
Query: 425 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 484
+ EREKLL +E++L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKT
Sbjct: 555 EGEREKLLKMEDVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKT 614
Query: 485 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 544
ELCK L+ +F++E+ +IRIDMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 615 ELCKALAGFLFDSEDHLIRIDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYS 674
Query: 545 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKG 603
+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M +
Sbjct: 675 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQAIQAMGDTS 734
Query: 604 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
D + +K AVM +VK YFRPE INRID+++VF LN NI SIA IQL+ LK +L + N+
Sbjct: 735 DYDAVKAAVMEDVKAYFRPELINRIDEVVVFHGLNAANIRSIAQIQLDSLKKRLAEQNLR 794
Query: 664 LKISKAALKKISNIGFDLIYGAR 686
L++S+AAL ++ GFD +YGAR
Sbjct: 795 LEVSEAALDVLAQAGFDPVYGAR 817
>gi|226939364|ref|YP_002794437.1| ClpB [Laribacter hongkongensis HLHK9]
gi|226714290|gb|ACO73428.1| ClpB [Laribacter hongkongensis HLHK9]
Length = 857
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/676 (65%), Positives = 571/676 (84%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E L KYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGETVNSADAEGKREALSKYTLDLTERAREGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRLLVLDLAALLAGAKFRGEFEERLKSVLD 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S ++ +IFIDE+HT++G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 ELSKDEGQTLIFIDEIHTLVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V EP +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVMVNEPSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RR+IQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMEIDSKPESMDKLDRRIIQLKIEREAVKKETDEASQKRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI KL +YA+L++IWK EK + SQ IK+E++KVR +I A R+ D+ S+L+YG
Sbjct: 445 EEEIGKLSKEYADLDEIWKAEKAQVVGSQSIKDELDKVRSQIEDAKRRGDFGKASELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + + + LL+T+VG+EEIAE+VSR TGIPVSK+++ EREK
Sbjct: 505 KLPELESRLKAAEAGE----GSKGQNRLLRTEVGAEEIAEVVSRATGIPVSKMLEGEREK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E++L +RVVGQDEA+ V++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL
Sbjct: 561 LLHMEDVLHQRVVGQDEAVRVVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSE++EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 621 AGFMFDSEDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT++VMTSN+GS +I+ M ++IKL
Sbjct: 681 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVVVMTSNVGSQQIQSMAGDHYDLIKL 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVMNEVK YFRPEFINRID+++VF L++ NI +IA IQL L+ +L K+ + L+++ A
Sbjct: 741 AVMNEVKGYFRPEFINRIDEVVVFHGLDQANIRAIARIQLKRLEARLDKLELSLQVTDDA 800
Query: 671 LKKISNIGFDLIYGAR 686
L K++ GFD +YGAR
Sbjct: 801 LDKLAEAGFDPVYGAR 816
>gi|74316833|ref|YP_314573.1| ClpB protein [Thiobacillus denitrificans ATCC 25259]
gi|74056328|gb|AAZ96768.1| ClpB protein [Thiobacillus denitrificans ATCC 25259]
Length = 859
Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/676 (65%), Positives = 564/676 (83%), Gaps = 5/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ SQ+ E L KYT+DLT++AR GKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGENVQSQEAEGQREALAKYTLDLTQRARDGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L KK+L+LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPETLKGKKVLVLDLAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + I+F+DE+HT++G GK EG+IDAGNMLKP L+RGELH IGATTL+EYR+YIE
Sbjct: 265 ELAMDPGRYIVFLDEIHTLVGAGKAEGAIDAGNMLKPALARGELHLIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDAALERRFQKVMVDEPSVESTIAILRGLQERYELHHGVDITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+SKKRL L+
Sbjct: 385 FLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDEASKKRLGLL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI+KL +YA+LE++WK EK ++ S +KEEI+K+R ++ R+ V++++YG
Sbjct: 445 EDEIDKLGREYADLEEVWKSEKAQVQGSAHLKEEIDKLRGEMADLQRQGKLDKVAEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + F LL+T+VG+EEIAE+VSR TGIPVSK++Q ER+K
Sbjct: 505 KLPQLEAQLKHA-----EASGEKPVFKLLRTEVGAEEIAEVVSRATGIPVSKMMQGERDK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+++E+ L RVVGQDEA++ VS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 560 LMHMEDHLHGRVVGQDEAVAVVSDAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTELCKTL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ E ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE
Sbjct: 620 AEYLFDSAEHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++M D +++KL
Sbjct: 680 IEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQQMSGDDYQVVKL 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AV+ EVK YFRPEFINRID+++VF L+ NI SIA IQL L+ +L M M L ++ AA
Sbjct: 740 AVLGEVKSYFRPEFINRIDEVVVFHALSESNIASIARIQLKALEARLAAMEMKLDVTDAA 799
Query: 671 LKKISNIGFDLIYGAR 686
L +I+ GFD +YGAR
Sbjct: 800 LAEIAKAGFDPVYGAR 815
>gi|333375879|ref|ZP_08467677.1| chaperone protein ClpB [Kingella kingae ATCC 23330]
gi|332969337|gb|EGK08362.1| chaperone protein ClpB [Kingella kingae ATCC 23330]
Length = 858
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/678 (64%), Positives = 565/678 (83%), Gaps = 7/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + +Q E+ LKKYT DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 QGQTVDNQNAEDQREALKKYTTDLTERARNGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL K++L+LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKDDGNSLIFIDEIHTLVGAGKSDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQERYEIHHGVDITDPAIVAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQL++E + +E D++SKKRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLQMEKMHVAKETDDASKKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI L+ +YA+L++IWK EK S +K++IE RLKI +A R D+ S+L+YG
Sbjct: 445 DEEIGSLQKEYADLDEIWKAEKASSVSSNDVKKQIEDTRLKIEQAKRAGDFAKASELEYG 504
Query: 371 ELNKL-ERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
L KL +++ +S ++ ANK L +T+VG+EE+AEIVSR TGIPVSK+++ ERE
Sbjct: 505 VLPKLTQQLHAAESSGSLK---QANK--LFRTQVGAEEVAEIVSRMTGIPVSKMMEGERE 559
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E +L KRVVGQDEA+ AV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKT
Sbjct: 560 KLLKMEEVLHKRVVGQDEAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKT 619
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++EE +IR+DMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 620 LANFLFDSEEHLIRVDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLD 679
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEII 608
E+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT++VMTSN+GS I+EM + D +
Sbjct: 680 EVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVVMTSNIGSQNIQEMGDTSDYAAV 739
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM++VK YFRPE INRID+++VF L++ NI +IA IQL L+N+L N+ L++S+
Sbjct: 740 KEAVMDDVKAYFRPELINRIDEVVVFHGLSQANIRNIAKIQLIGLRNRLAAQNLRLEVSE 799
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I++ GFD +YGAR
Sbjct: 800 AALDLIADAGFDPVYGAR 817
>gi|171463224|ref|YP_001797337.1| ATP-dependent chaperone ClpB [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192762|gb|ACB43723.1| ATP-dependent chaperone ClpB [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 867
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/677 (64%), Positives = 564/677 (83%), Gaps = 1/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ S E LKKYT+DLTE+AR+GKLDPVIGRDDEIRR IQ+LQRR KNNPVL
Sbjct: 145 GGESVNSANAEGQREALKKYTVDLTERARMGKLDPVIGRDDEIRRTIQILQRRGKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGE GVGKTAIVEGLAQRI+NGEVP +L +K++L+LD+ALLLAG KYRGEFE+RLK +L
Sbjct: 205 IGESGVGKTAIVEGLAQRIVNGEVPETLKNKRVLVLDMALLLAGAKYRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ IIFIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DVAKDEGQTIIFIDEIHTMVGAGKGDGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+++EEP +E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS+RYI+DR
Sbjct: 325 KDPALERRFQKVMIEEPSVEATIAILRGLQERYELHHGIEITDPAIVAAAELSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA ++I++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAGSRIRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASQKRLGLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L +YA+LE+IWK EK + + +KEEIEKV+ +I+K R + V++L+YG
Sbjct: 445 EEEIKRLGAEYADLEEIWKAEKGAVLGAANLKEEIEKVKAEISKLQRDGKLEQVAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L +LE LK + + + + K LL+T+VG EEIAE+VSR TGIPVSK++Q ER+
Sbjct: 505 KLPELEAKLKSAAAAEAKGDKDGVVKNKLLRTQVGVEEIAEVVSRATGIPVSKMMQGERD 564
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL KRVVGQ+EAI AVS+AIRRSR+GL++ RPYGSF+FLGPTGVGKT+LCK
Sbjct: 565 KLLKMEELLHKRVVGQEEAIRAVSDAIRRSRAGLAEENRPYGSFLFLGPTGVGKTKLCKA 624
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+IL D
Sbjct: 625 LAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRHPYSVILFD 684
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
EIEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + IK
Sbjct: 685 EIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQSMADKKQSEIK 744
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AV E+K +FRPEF+NRID+I+VF L++ NI +IA I L L ++L K++M L++S A
Sbjct: 745 EAVFEELKNHFRPEFLNRIDEIVVFHGLDKGNIANIAKILLKNLSDRLAKVDMQLEVSDA 804
Query: 670 ALKKISNIGFDLIYGAR 686
AL KI+ +GFD ++GAR
Sbjct: 805 ALNKIAEVGFDPVFGAR 821
>gi|381401592|ref|ZP_09926490.1| ClpB protein [Kingella kingae PYKK081]
gi|380833446|gb|EIC13316.1| ClpB protein [Kingella kingae PYKK081]
Length = 858
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/678 (64%), Positives = 564/678 (83%), Gaps = 7/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + +Q E+ LKKYT DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 QGQTVDNQNAEDQREALKKYTTDLTERARNGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL K++L+LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKDDGNSLIFIDEIHTLVGAGKSDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQERYEIHHGVDITDPAIVAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA+ IK+E+DSKPE MDKL+RR+IQL++E + +E D++SKKRL LI
Sbjct: 385 FLPDKAIDLIDEAASHIKMELDSKPEQMDKLDRRIIQLQMEKMHVAKETDDASKKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI L+ +YA+L++IWK EK S +K++IE RLKI +A R D+ S+L+YG
Sbjct: 445 DEEIGNLQKEYADLDEIWKAEKASSVSSNDVKKQIEDTRLKIEQAKRAGDFAKASELEYG 504
Query: 371 ELNKL-ERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
L KL +++ +S ++ ANK L +T+VG+EE+AEIVSR TGIPVSK+++ ERE
Sbjct: 505 VLPKLTQQLHAAESSGSLK---QANK--LFRTQVGAEEVAEIVSRMTGIPVSKMMEGERE 559
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E +L KRVVGQDEA+ AV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKT
Sbjct: 560 KLLKMEEVLHKRVVGQDEAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKT 619
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++EE +IR+DMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 620 LANFLFDSEEHLIRVDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLD 679
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEII 608
E+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT++VMTSN+GS I+EM + D +
Sbjct: 680 EVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVVMTSNIGSQNIQEMGDTSDYAAV 739
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM++VK YFRPE INRID+++VF L++ NI +IA IQL L+N+L N+ L++S+
Sbjct: 740 KEAVMDDVKAYFRPELINRIDEVVVFHGLSQANIRNIAKIQLIGLRNRLAAQNLRLEVSE 799
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I++ GFD +YGAR
Sbjct: 800 AALDLIADAGFDPVYGAR 817
>gi|340362813|ref|ZP_08685179.1| chaperone protein ClpB [Neisseria macacae ATCC 33926]
gi|339886971|gb|EGQ76574.1| chaperone protein ClpB [Neisseria macacae ATCC 33926]
Length = 857
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 561/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVSKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM EVK YFRPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+
Sbjct: 739 KEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 799 AALDLIAKAGFDPVYGAR 816
>gi|261364438|ref|ZP_05977321.1| ATP-dependent chaperone protein ClpB [Neisseria mucosa ATCC 25996]
gi|288567348|gb|EFC88908.1| ATP-dependent chaperone protein ClpB [Neisseria mucosa ATCC 25996]
Length = 857
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 561/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM EVK YFRPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+
Sbjct: 739 KEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 799 AALDLIAKAGFDPVYGAR 816
>gi|349611011|ref|ZP_08890327.1| chaperone ClpB [Neisseria sp. GT4A_CT1]
gi|419797400|ref|ZP_14322885.1| ATP-dependent chaperone protein ClpB [Neisseria sicca VK64]
gi|348615041|gb|EGY64573.1| chaperone ClpB [Neisseria sp. GT4A_CT1]
gi|385698231|gb|EIG28607.1| ATP-dependent chaperone protein ClpB [Neisseria sicca VK64]
Length = 857
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 561/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM EVK YFRPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+
Sbjct: 739 KEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 799 AALDLIAKAGFDPVYGAR 816
>gi|294669705|ref|ZP_06734772.1| hypothetical protein NEIELOOT_01606 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308618|gb|EFE49861.1| hypothetical protein NEIELOOT_01606 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 857
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 561/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM EVK YFRPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+
Sbjct: 739 KEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 799 AALDLIAEAGFDPVYGAR 816
>gi|332284688|ref|YP_004416599.1| ATP-dependent protease, ATPase subunit [Pusillimonas sp. T7-7]
gi|330428641|gb|AEC19975.1| ATP-dependent protease, ATPase subunit [Pusillimonas sp. T7-7]
Length = 864
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/717 (61%), Positives = 574/717 (80%), Gaps = 16/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ + E + L KYT DLTE+ARLGKLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGESVTDSEGESNREALAKYTTDLTERARLGKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNNEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + I+FIDELHTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 ELSQDDGRTIVFIDELHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+ EPD+E TI+ILRGLQ++YE+HHGV ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLINEPDVESTIAILRGLQERYELHHGVAITDPAIVAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+I++EIDSKPE+MDKL+RR+IQLKIE EA+ ++ DE S++RL I
Sbjct: 385 FLPDKAIDLIDEAAARIRMEIDSKPEVMDKLDRRIIQLKIEREAVNKDTDEGSQRRLKAI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL+ +Y + E++WK EK ++ SQ IKEEIE+VR + + RK + +++L+YG
Sbjct: 445 EDELVKLQREYNDYEEVWKSEKAAVQGSQAIKEEIERVRADMAELQRKGQFDKLAELQYG 504
Query: 371 ELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
+L +LE L+ E SQ Q + + LL+T+VG+EEIAE+VSR TGIPV+K++Q ER
Sbjct: 505 KLPELESRLQSAEASQ---QQEVDDERPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGER 561
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L +RVVGQ+EA+S V++AIRRSR+GLSD RPYGSF+FLGPTGVGKTEL K
Sbjct: 562 DKLLKMEDFLHQRVVGQNEAVSLVADAIRRSRAGLSDPSRPYGSFLFLGPTGVGKTELTK 621
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LL
Sbjct: 622 ALANFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLL 681
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS I+ M E++
Sbjct: 682 DEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQSMAGQPYEVV 741
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K + +E+K FRPEF+NRID+++VF L K+I SIA IQ+ L ++ + M L++S
Sbjct: 742 KEVIWDELKQSFRPEFLNRIDEVVVFHGLEAKHIESIARIQIQRLAQRMAQKEMRLEVSD 801
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 725
AAL +++ GFD ++GAR + K+++ + H ++P A I G GP+ +
Sbjct: 802 AALAQLARTGFDPVFGARPL---KRAI-----QQHIENPIARLILEGKF---GPKDV 847
>gi|298368650|ref|ZP_06979968.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 014
str. F0314]
gi|298282653|gb|EFI24140.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 014
str. F0314]
Length = 857
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/678 (63%), Positives = 561/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D + +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYDAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM EVK YFRPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+
Sbjct: 739 KEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 799 AALDLIAKAGFDPVYGAR 816
>gi|225023847|ref|ZP_03713039.1| hypothetical protein EIKCOROL_00713 [Eikenella corrodens ATCC
23834]
gi|224943321|gb|EEG24530.1| hypothetical protein EIKCOROL_00713 [Eikenella corrodens ATCC
23834]
Length = 857
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/679 (63%), Positives = 564/679 (83%), Gaps = 11/679 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILK-EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
YGEL KL L+ +S D + N L +T+VG++E+AEIVSR TGIPVSK+++ E
Sbjct: 503 YGELPKLGAQLQAAESNADGKKQNK-----LFRTEVGADEVAEIVSRMTGIPVSKMMEGE 557
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELC
Sbjct: 558 RDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELC 617
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL
Sbjct: 618 KALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVIL 677
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
LDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E
Sbjct: 678 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEA 737
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
+K AVM+EVK YFRPE INRID+++VF L+++NI SIA IQL L+ +L ++ LK+
Sbjct: 738 VKKAVMDEVKAYFRPEMINRIDEVVVFHGLDQENIRSIAKIQLKGLEKRLEAQHLHLKVD 797
Query: 668 KAALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 798 DAALDLIAEAGFDPVYGAR 816
>gi|329119993|ref|ZP_08248665.1| chaperone protein ClpB [Neisseria bacilliformis ATCC BAA-1200]
gi|327463906|gb|EGF10220.1| chaperone protein ClpB [Neisseria bacilliformis ATCC BAA-1200]
Length = 857
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/678 (63%), Positives = 560/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL + L+ P L +T+VG++E+AEIVSR TGIPV+K+++ ER
Sbjct: 503 YGELPKLGQQLQAAESN----PEGKKANKLFRTEVGADEVAEIVSRMTGIPVAKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM EVK YFRPE INRID+++VF LN++NI +IA IQL L+ +L ++ LK+
Sbjct: 739 KEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLKVDD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 799 AALDLIAKAGFDPVYGAR 816
>gi|387128271|ref|YP_006296876.1| clpB protein [Methylophaga sp. JAM1]
gi|386275333|gb|AFI85231.1| ClpB protein [Methylophaga sp. JAM1]
Length = 861
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/677 (63%), Positives = 555/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+KYTIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGERVTDQNAEEQRQALEKYTIDLTARAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGMKNKRVLALDMGSLIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQY+E
Sbjct: 265 DLSKQEGQIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E TI+ILRGL ++YEVHHGV+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVGEPSVESTIAILRGLSERYEVHHGVDITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLKIE A+++E DE+SKKRL +
Sbjct: 385 NLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKIERVALQKESDEASKKRLDTL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL +Y +LE++WK EK + SQ IKEE+EK RL++ A R + + +S+L+YG
Sbjct: 445 ETEMKKLAREYTDLEEVWKSEKAALHGSQHIKEELEKARLELESANRSGNLEKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L +Q ++Q FTLL+ +VG EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 RIPALEKQLDIATQAEMQ------DFTLLRNRVGEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL ++ L +RV+GQDEA+++V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLKMDEALHERVIGQDEAVNSVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ATFLFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I+EM DK + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSNVIQEMAGEDKYDTMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+DD++VF L + I +IA+IQL+ L+ +L + M L++S A
Sbjct: 739 NAVMEIVGQHFRPEFINRVDDVVVFHPLQKSQIHAIADIQLSHLRQRLAEKEMGLELSDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL +S GFD +YGAR
Sbjct: 799 ALDMLSEAGFDPVYGAR 815
>gi|261377553|ref|ZP_05982126.1| ATP-dependent chaperone protein ClpB [Neisseria cinerea ATCC 14685]
gi|269146293|gb|EEZ72711.1| ATP-dependent chaperone protein ClpB [Neisseria cinerea ATCC 14685]
Length = 857
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 560/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKETDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++I+ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQIDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 739 KEIVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 799 AALDIIAKAGFDPIYGAR 816
>gi|349575394|ref|ZP_08887312.1| chaperone protein ClpB [Neisseria shayeganii 871]
gi|348013042|gb|EGY51968.1| chaperone protein ClpB [Neisseria shayeganii 871]
Length = 861
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/676 (62%), Positives = 560/676 (82%), Gaps = 5/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ + E+ LKKYT+DLTE+AR GKLDPVIGRDDEIRRA+QVLQRR+KNNPVL
Sbjct: 150 GGESVDNPNAEDQREALKKYTLDLTERAREGKLDPVIGRDDEIRRAVQVLQRRTKNNPVL 209
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI++GEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +L
Sbjct: 210 IGEPGVGKTAIVEGLAQRIVDGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKAVLN 269
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 270 DLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 329
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DR
Sbjct: 330 KDAALERRFQKVLVSEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSNRYITDR 389
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQL++E +++E DE+SKKRLLLI
Sbjct: 390 FLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLRMEKMHVEKESDEASKKRLLLI 449
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI L+ +YA+L++IWK EK S IK+ I+++++KI + R+ + + ++++YG
Sbjct: 450 DEEIAALQKEYADLDEIWKAEKAATSGSADIKKRIDEIKIKIEQFKRQGNLEAAARMQYG 509
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L ++E LK A L +TKVG++E+AEIVSR TGIPVSK+++ EREK
Sbjct: 510 DLPQMEAQLKAAENS-----GGAQSNRLFRTKVGADEVAEIVSRMTGIPVSKMMEGEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L +RVVGQDEA+ AV++AIRRSRSGLSD +PYGSF+FLGPTGVGKTELCKTL
Sbjct: 565 LLKMEDVLHRRVVGQDEAVRAVADAIRRSRSGLSDPNKPYGSFLFLGPTGVGKTELCKTL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 625 AGFLFDSEEHLIRIDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSVVLLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D + +K
Sbjct: 685 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTADYDALKA 744
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM +VK +FRPE INRID+++VF L++++I SIA IQL L +L + L++S AA
Sbjct: 745 VVMEDVKQHFRPELINRIDEVVVFHGLDQQHIRSIAKIQLQGLTRRLAAQELHLEVSDAA 804
Query: 671 LKKISNIGFDLIYGAR 686
L ++ GFD IYGAR
Sbjct: 805 LDVLAQAGFDPIYGAR 820
>gi|254468710|ref|ZP_05082116.1| ATP-dependent chaperone ClpB [beta proteobacterium KB13]
gi|207087520|gb|EDZ64803.1| ATP-dependent chaperone ClpB [beta proteobacterium KB13]
Length = 863
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/676 (64%), Positives = 570/676 (84%), Gaps = 5/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
N +NI + E H L+KYTIDLT AR GKLDPVIGRDDEIRR IQVLQRRSKNNPVL
Sbjct: 145 NEENIKTPDAENHRQSLQKYTIDLTYLARDGKLDPVIGRDDEIRRTIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI+EGLAQRI+N EVP+SL +K++L LD+A LLAG KYRG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIIEGLAQRIVNQEVPDSLKNKQVLSLDMASLLAGAKYRGDFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ +Q +II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYR Y+E
Sbjct: 265 EINASQGNIILFIDEIHTMVGAGKTEGAMDAGNMLKPALARGELHCVGATTLNEYRMYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++++EP++E TI+ILRGLQ+KYE+HH VEITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVMIDEPNVEATIAILRGLQEKYELHHNVEITDPAIVAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IKIEIDSKPE +DKLERRL+QLKIE EA+K++ D +SK+R +I
Sbjct: 385 FLPDKAIDLIDEAASRIKIEIDSKPEQLDKLERRLVQLKIEREAVKKDKDAASKERFEII 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI K+E ++A+LE+IWK EK + ++ IKE++E +++ + + RK +WQ VS+L+YG
Sbjct: 445 ESEIKKIEKEFADLEEIWKSEKATLIGAKGIKEKLESLKISMEEEKRKGNWQRVSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
E+ +LE LK + D+ P + NK +L+T+VG++EIAE+VSR TGIPV+K++Q E+EK
Sbjct: 505 EIPQLEEQLK---KADVTKPASQNK--MLRTEVGADEIAEVVSRATGIPVAKMMQGEKEK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+N+E++L +RVVGQDEA+ ++SNAIRRSRSGLSD RPYGSF+FLGPTGVGKTEL K+L
Sbjct: 560 LINMESVLHQRVVGQDEAVKSISNAIRRSRSGLSDEGRPYGSFLFLGPTGVGKTELSKSL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 620 ASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LD+GRLTD +G+T++F+NT+I+MTSNLGS+ I++M + D ++IK+
Sbjct: 680 IEKAHPDVFNVLLQVLDEGRLTDGKGKTVDFKNTVIIMTSNLGSNLIQKMTQDDYQVIKI 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
+VM EVK YF+PEFINRIDD++VF L +++ I QL L KL K+ + K++ A
Sbjct: 740 SVMAEVKNYFKPEFINRIDDVVVFHGLGERHLHDITKNQLENLLLKLKKIGIQAKVTDRA 799
Query: 671 LKKISNIGFDLIYGAR 686
+ +I GFD IYGAR
Sbjct: 800 IFEIGKAGFDPIYGAR 815
>gi|404379863|ref|ZP_10984912.1| chaperone ClpB [Simonsiella muelleri ATCC 29453]
gi|294484380|gb|EFG32063.1| chaperone ClpB [Simonsiella muelleri ATCC 29453]
Length = 857
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/677 (64%), Positives = 561/677 (82%), Gaps = 6/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
NG+ I SQ E+ LKKYT DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 NGQTIDSQDAEDQREALKKYTTDLTERARNGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL K++L+LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKDDGNSLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEATIAILRGLQERYEIHHGVDITDPAIVAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQL++E + +E D++SKKRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLQMEKMHVAKETDDASKKRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI L+ +YA+L++IWK EK S IK++I+ ++LKI +A R D+ S+L+YG
Sbjct: 445 DEEIASLQKEYADLDEIWKAEKAASSSSADIKKQIDDLKLKIEQAKRAGDYAKASELEYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L L + L+ D+ NK L +T+VG+EEIAEIVSR TGIPVSK+++ ER+K
Sbjct: 505 QLPNLTQQLQ---AADVSGSLKTNK--LFRTQVGAEEIAEIVSRMTGIPVSKMMEGERDK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQDEA+ AV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL
Sbjct: 560 LLKMEEVLHKRVIGQDEAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E+ +IRIDMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 620 ASFLFDSEDHLIRIDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I+ M + D + +K
Sbjct: 680 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQNIQNMGDTSDYDAVK 739
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM +VK YFRPE INRID+++VF LN+ NI +IA IQL LK +L N+ L++S A
Sbjct: 740 AAVMEDVKAYFRPELINRIDEVVVFHGLNQANIRNIAQIQLGSLKRRLAAQNLRLEVSDA 799
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD IYGAR
Sbjct: 800 ALDLIAESGFDPIYGAR 816
>gi|296314090|ref|ZP_06864031.1| ATP-dependent chaperone protein ClpB [Neisseria polysaccharea ATCC
43768]
gi|296839347|gb|EFH23285.1| ATP-dependent chaperone protein ClpB [Neisseria polysaccharea ATCC
43768]
Length = 857
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/678 (63%), Positives = 560/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPV+K+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVAKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 739 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 799 AALDIIAKAGFDPIYGAR 816
>gi|220933996|ref|YP_002512895.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995306|gb|ACL71908.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 859
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/677 (63%), Positives = 556/677 (82%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQRVDDPNAEEQRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L ++++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNRRLLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKQEGRIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAAMLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K+E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEEMDRLERRLIQLKIEREALKKESDEASRKRLDTL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI+KLE ++A+L++IWK EK + + IKEE+E+ RL++ A R D +S+L+YG
Sbjct: 445 EGEIDKLEREFADLDEIWKAEKAALSGTAHIKEELERARLELETARRAGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++ ++ LL+ KV EEIAE+VSR TGIPVSK+++ EREK
Sbjct: 505 RIPELEKQLDMAAQAEM------HEMRLLRNKVSDEEIAEVVSRWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQ EA+ AVSNAIRRSR+GLSD +RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLRMEEALTTRVVGQSEAVKAVSNAIRRSRAGLSDPRRPNGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AAFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+EM + E +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQIIQEMAGEEHYEAMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+D+++VF L R+ I SI +IQL+ L+ ++ + ++ L++S+A
Sbjct: 739 AAVMEVVGSHFRPEFINRVDEVVVFHPLGREQIRSITSIQLDDLRKRMAERDLKLEVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALDRLGEAGFDPVYGAR 815
>gi|429743828|ref|ZP_19277364.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 020
str. F0370]
gi|429164509|gb|EKY06640.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 020
str. F0370]
Length = 860
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 559/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARNGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMERMHVEKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++I++++ KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQIDEIKFKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPV+K+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVAKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF LN+ NI SIA IQL L+ +L N+ L +
Sbjct: 739 KEVVMEDVKEHFRPEMINRIDEVVVFHGLNQANIRSIAKIQLKGLEKRLAAQNLRLNVDD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 799 AALDLIAQAGFDPVYGAR 816
>gi|268597099|ref|ZP_06131266.1| chaperone clpB [Neisseria gonorrhoeae FA19]
gi|268603397|ref|ZP_06137564.1| ClpB protein [Neisseria gonorrhoeae PID1]
gi|268681877|ref|ZP_06148739.1| ClpB protein [Neisseria gonorrhoeae PID332]
gi|268550887|gb|EEZ45906.1| chaperone clpB [Neisseria gonorrhoeae FA19]
gi|268587528|gb|EEZ52204.1| ClpB protein [Neisseria gonorrhoeae PID1]
gi|268622161|gb|EEZ54561.1| ClpB protein [Neisseria gonorrhoeae PID332]
Length = 857
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/678 (63%), Positives = 560/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 739 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 799 AALDIIAKAGFDPIYGAR 816
>gi|319778197|ref|YP_004129110.1| ClpB protein [Taylorella equigenitalis MCE9]
gi|397661981|ref|YP_006502681.1| chaperone protein ClpB [Taylorella equigenitalis ATCC 35865]
gi|317108221|gb|ADU90967.1| ClpB protein [Taylorella equigenitalis MCE9]
gi|394350160|gb|AFN36074.1| chaperone protein ClpB [Taylorella equigenitalis ATCC 35865]
gi|399115894|emb|CCG18699.1| chaperone protein ClpB [Taylorella equigenitalis 14/56]
Length = 856
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 563/678 (83%), Gaps = 8/678 (1%)
Query: 10 VNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
+ G + +S Q+ E LKKYT DLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRRSKNNP
Sbjct: 142 IRGDSTVSDQEGESQRQALKKYTTDLTERARMGKLDPVIGRDDEIRRAIQILQRRSKNNP 201
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+N EVP SL K++L LD+A LLAG K+RGEFE+RLK +
Sbjct: 202 VLIGEPGVGKTAIVEGLAQRIVNDEVPESLRGKRVLSLDMASLLAGAKFRGEFEERLKAV 261
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
LKE++ ++ + I+FIDE+HTM+G G EG+IDAGNMLKP LSRGELHCIGATTL+EYR+Y
Sbjct: 262 LKELAQDEGNNIVFIDEIHTMVGAGGAEGAIDAGNMLKPALSRGELHCIGATTLDEYRKY 321
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+L++EPD+E TI+ILRGL+++YE+HHGVEITDPAIVAA+ELS RYI+
Sbjct: 322 IEKDAALERRFQKVLIDEPDVEATIAILRGLKERYEIHHGVEITDPAIVAAAELSNRYIT 381
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAAA+I++EIDSKPE+MD+L+RR+IQLKIE EA++RE DE+SK+RL
Sbjct: 382 DRFLPDKAIDLIDEAAARIRMEIDSKPEVMDRLDRRIIQLKIEREAVRREDDEASKRRLQ 441
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI+ E+ +L+ +Y + E+IWK EK+ + Q I+E+I+KV+ ++ + R+ +++ +S+L+
Sbjct: 442 LIEDELARLQREYDDYEQIWKAEKSSVHSVQSIREDIDKVKAQMAEYQRQGEYEKLSELQ 501
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YG+L LE LK + ++ K LL+T+VG+EEIAE+VSR TGIPVSK++Q ER
Sbjct: 502 YGKLPDLELRLKSAEKGEV-------KNQLLRTEVGTEEIAEVVSRATGIPVSKMMQGER 554
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
KLL +E+ L +RVVGQDEA+ VS+AIRRSR+GL+D +PYGSF+FLGPTGVGKTEL K
Sbjct: 555 AKLLTMEDRLHERVVGQDEAVRLVSDAIRRSRAGLADPSKPYGSFLFLGPTGVGKTELTK 614
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F+++E ++RIDMSEF+EKH+++RLIGAPPGYIGYEEGGYLTE +RRKPYS+ILL
Sbjct: 615 ALANFLFDSDEHMVRIDMSEFMEKHTVARLIGAPPGYIGYEEGGYLTEAIRRKPYSVILL 674
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSN+GS +I++M E I
Sbjct: 675 DEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNIGSQQIQKMSGEPYEKI 734
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K V +E+K FRPEF+NRID+I+VF L ++ I +IA IQ+ L +L + M+L+IS
Sbjct: 735 KDVVWDELKDSFRPEFLNRIDEIVVFHGLEKEQIANIAKIQIKRLAQRLAQFEMNLEISD 794
Query: 669 AALKKISNIGFDLIYGAR 686
A+ KI+ GFD ++GAR
Sbjct: 795 EAIAKIAEAGFDPVFGAR 812
>gi|261380959|ref|ZP_05985532.1| ATP-dependent chaperone protein ClpB [Neisseria subflava NJ9703]
gi|284796218|gb|EFC51565.1| ATP-dependent chaperone protein ClpB [Neisseria subflava NJ9703]
Length = 857
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 559/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTTDIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH++SRLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L ++ LK+
Sbjct: 739 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEAQHLHLKVDD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 799 AALDLIAEAGFDPVYGAR 816
>gi|385855517|ref|YP_005902030.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240355]
gi|325204458|gb|ADY99911.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240355]
Length = 859
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|319638313|ref|ZP_07993076.1| chaperone ClpB [Neisseria mucosa C102]
gi|317400586|gb|EFV81244.1| chaperone ClpB [Neisseria mucosa C102]
Length = 857
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 558/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E DE+SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDEASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PEGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L ++ LK+
Sbjct: 739 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEAQHLHLKVDD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 799 AALDLIAKAGFDPVYGAR 816
>gi|350570807|ref|ZP_08939153.1| chaperone protein ClpB [Neisseria wadsworthii 9715]
gi|349794755|gb|EGZ48565.1| chaperone protein ClpB [Neisseria wadsworthii 9715]
Length = 857
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/721 (61%), Positives = 577/721 (80%), Gaps = 27/721 (3%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ + E+ LKKYT DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGASVDNPNAEDQREALKKYTTDLTQRAREGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI++GEVP+SL +K++L+LD+A L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVDGEVPDSLRNKRLLVLDLAALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E +++E D++SKKRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMERMHVEKESDDASKKRLDLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI L+ +YA+L++IWK EK + IK++I+ +++KI +A R+ D+ S+L+YG
Sbjct: 445 DEEIAGLQKEYADLDEIWKAEKAASAGTADIKKQIDDIKVKIEQAKRQGDFARASELEYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNN-----ANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
EL KL SQ+ L NN ANK L +TKVG++E+AEIVSR TGIPVSK+++
Sbjct: 505 ELPKL-------SQQLQALENNPQEQQANK--LFRTKVGADEVAEIVSRMTGIPVSKMME 555
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
ER+KLL +E +L RVVGQDEA+ AVSNAIRRSRSGL+D +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHNRVVGQDEAVRAVSNAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
LCK L++ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALASFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 605
ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHHIQQMGTSDY 735
Query: 606 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
E +K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L N+ LK
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLAAQNLHLK 795
Query: 666 ISKAALKKISNIGFDLIYGARDVHGCKK-------SLSILLKK------IHKKSPEANFI 712
+ AAL I+ GFD +YGAR + + +L++L K IH K+ N I
Sbjct: 796 VDDAALDIIAKAGFDPVYGARPLKRAIQAEIENPLALALLEGKYQPESVIHVKADGDNLI 855
Query: 713 F 713
F
Sbjct: 856 F 856
>gi|416169730|ref|ZP_11608208.1| ATP-dependent chaperone ClpB [Neisseria meningitidis OX99.30304]
gi|325130543|gb|EGC53296.1| ATP-dependent chaperone ClpB [Neisseria meningitidis OX99.30304]
Length = 859
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|433497165|ref|ZP_20454199.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7089]
gi|433499232|ref|ZP_20456239.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7124]
gi|433501197|ref|ZP_20458181.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM174]
gi|432232878|gb|ELK88513.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7089]
gi|432233659|gb|ELK89285.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7124]
gi|432235003|gb|ELK90622.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM174]
Length = 859
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMSIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|161870340|ref|YP_001599510.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Neisseria
meningitidis 053442]
gi|161595893|gb|ABX73553.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Neisseria
meningitidis 053442]
Length = 859
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|254674233|emb|CBA10017.1| ATP-dependent protease, ATPase subunit [Neisseria meningitidis
alpha275]
Length = 859
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|313668136|ref|YP_004048420.1| ClpB protein [Neisseria lactamica 020-06]
gi|313005598|emb|CBN87035.1| ClpB protein [Neisseria lactamica 020-06]
Length = 857
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/678 (63%), Positives = 559/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIG PGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGGPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 739 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 799 AALDIIAKAGFDPIYGAR 816
>gi|421551086|ref|ZP_15997086.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69166]
gi|433471850|ref|ZP_20429233.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 68094]
gi|433477915|ref|ZP_20435233.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70012]
gi|433522194|ref|ZP_20478881.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 61103]
gi|433526339|ref|ZP_20482969.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69096]
gi|433539247|ref|ZP_20495722.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70030]
gi|402328620|gb|EJU63987.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69166]
gi|432207807|gb|ELK63795.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 68094]
gi|432214731|gb|ELK70627.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70012]
gi|432258572|gb|ELL13854.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 61103]
gi|432261103|gb|ELL16360.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69096]
gi|432272970|gb|ELL28072.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70030]
Length = 859
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|121635155|ref|YP_975400.1| ClpB protein [Neisseria meningitidis FAM18]
gi|433494997|ref|ZP_20452063.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM762]
gi|120866861|emb|CAM10620.1| ClpB protein [Neisseria meningitidis FAM18]
gi|432229385|gb|ELK85073.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM762]
Length = 859
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|218768467|ref|YP_002342979.1| ClpB protein [Neisseria meningitidis Z2491]
gi|433480088|ref|ZP_20437375.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63041]
gi|433519182|ref|ZP_20475905.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 65014]
gi|433541327|ref|ZP_20497775.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63006]
gi|54035904|sp|Q9JTP9.1|CLPB_NEIMA RecName: Full=Chaperone protein ClpB
gi|121052475|emb|CAM08814.1| ClpB protein [Neisseria meningitidis Z2491]
gi|432215048|gb|ELK70939.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63041]
gi|432256110|gb|ELL11434.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 65014]
gi|432276868|gb|ELL31922.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63006]
Length = 859
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|418290904|ref|ZP_12902993.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM220]
gi|421544792|ref|ZP_15990865.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM140]
gi|421546880|ref|ZP_15992921.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM183]
gi|421549129|ref|ZP_15995147.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2781]
gi|421552237|ref|ZP_15998216.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM576]
gi|372200802|gb|EHP14820.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM220]
gi|402322356|gb|EJU57818.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM183]
gi|402322705|gb|EJU58156.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM140]
gi|402324519|gb|EJU59951.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2781]
gi|402332390|gb|EJU67717.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM576]
Length = 859
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|416212795|ref|ZP_11622019.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240013]
gi|325144759|gb|EGC67052.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240013]
Length = 859
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|225075318|ref|ZP_03718517.1| hypothetical protein NEIFLAOT_00321 [Neisseria flavescens
NRL30031/H210]
gi|224953493|gb|EEG34702.1| hypothetical protein NEIFLAOT_00321 [Neisseria flavescens
NRL30031/H210]
Length = 857
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 560/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLSAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 739 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRNIAKIQLKGLEKRLEKQNLRLTVSD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 799 AALDIIAKAGFDPVYGAR 816
>gi|325267605|ref|ZP_08134257.1| chaperone protein ClpB [Kingella denitrificans ATCC 33394]
gi|324980955|gb|EGC16615.1| chaperone protein ClpB [Kingella denitrificans ATCC 33394]
Length = 858
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/677 (64%), Positives = 555/677 (81%), Gaps = 5/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
GK + + E+ LKKYT+DLTE+AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 QGKTVDNPNAEDQREALKKYTLDLTERAREGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL K++L+LD+A L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAQDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E+TI+ILRGLQ +YE+HHGVEITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVGEPSVEDTIAILRGLQDRYEIHHGVEITDPAIVAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IKIE ++KPE MDKL+RR+IQLK+E + +E DE+SKKRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKIEKETKPEQMDKLDRRIIQLKMEKMHVSKESDEASKKRLALI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI LE +YA+L+++WK EK +K +I++++ KI +A R D+ S+L+YG
Sbjct: 445 DEEIAGLEKEYADLDEVWKAEKASAVSLTDLKAQIDEIKHKIEQAKRVGDYGLASELEYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
EL KL LK+ + Q N TL +T+VG+EEIAEIVSR TGIPVSK+++ EREK
Sbjct: 505 ELPKLTLQLKDAERAGNQKTTN----TLFRTEVGAEEIAEIVSRMTGIPVSKMMEGEREK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L RVVGQDEA+ AV++AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCKTL
Sbjct: 561 LLRMEDVLHNRVVGQDEAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E+ +IR+DMSE++EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 621 ASFLFDSEDHLIRVDMSEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT++VMTSN+GS I+E+ + E +K
Sbjct: 681 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVVMTSNIGSQHIQELGAEAPYEAVK 740
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM +VK YFRPE INRID+++VF L + +I IA IQL+ LK +L + L++S A
Sbjct: 741 AAVMADVKDYFRPELINRIDEVVVFHALGQAHIRRIAQIQLDGLKKRLEAQGLYLQVSDA 800
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD IYGAR
Sbjct: 801 ALDVLAKAGFDPIYGAR 817
>gi|433513789|ref|ZP_20470577.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63049]
gi|432246436|gb|ELL01883.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63049]
Length = 859
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|421542768|ref|ZP_15988873.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM255]
gi|402316565|gb|EJU52108.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM255]
Length = 859
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|254805248|ref|YP_003083469.1| putative ClpB protein [Neisseria meningitidis alpha14]
gi|254668790|emb|CBA06732.1| putative ClpB protein [Neisseria meningitidis alpha14]
Length = 859
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|422111082|ref|ZP_16380853.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378342|emb|CBX23039.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 857
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 559/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPV+K+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVAKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 739 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AL I+ GFD IYGAR
Sbjct: 799 TALDIIAKAGFDPIYGAR 816
>gi|240014358|ref|ZP_04721271.1| putative ClpB protein [Neisseria gonorrhoeae DGI18]
gi|240016791|ref|ZP_04723331.1| putative ClpB protein [Neisseria gonorrhoeae FA6140]
gi|240121920|ref|ZP_04734882.1| putative ClpB protein [Neisseria gonorrhoeae PID24-1]
gi|291044107|ref|ZP_06569823.1| ClpB protein [Neisseria gonorrhoeae DGI2]
gi|291012570|gb|EFE04559.1| ClpB protein [Neisseria gonorrhoeae DGI2]
Length = 857
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 559/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVA +ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVATAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 739 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 799 AALDIIAKAGFDPIYGAR 816
>gi|385323885|ref|YP_005878324.1| chaperone ClpB (short) [Neisseria meningitidis 8013]
gi|261392272|emb|CAX49792.1| chaperone ClpB (short) [Neisseria meningitidis 8013]
Length = 805
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 94 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 148
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 149 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 208
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 209 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 268
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 269 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 328
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 329 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 388
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 389 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 448
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 449 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 506
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 507 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 566
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 567 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 626
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 627 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 686
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 687 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 746
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 747 AALDIIAKAGFDPIYGAR 764
>gi|421563669|ref|ZP_16009485.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2795]
gi|421564898|ref|ZP_16010685.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3081]
gi|421907229|ref|ZP_16337113.1| Chaperone protein clpB Heat shock protein F84,1 [Neisseria
meningitidis alpha704]
gi|433507471|ref|ZP_20464376.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9757]
gi|393291645|emb|CCI73100.1| Chaperone protein clpB Heat shock protein F84,1 [Neisseria
meningitidis alpha704]
gi|402340154|gb|EJU75357.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2795]
gi|402345503|gb|EJU80619.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3081]
gi|432240488|gb|ELK96023.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9757]
Length = 859
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRNIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAQAGFDPIYGAR 818
>gi|345875625|ref|ZP_08827416.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri LMG 5135]
gi|417958313|ref|ZP_12601228.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri ATCC 51223]
gi|343966971|gb|EGV35222.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri ATCC 51223]
gi|343968700|gb|EGV36924.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri LMG 5135]
Length = 857
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/681 (63%), Positives = 562/681 (82%), Gaps = 14/681 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + + E+ LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGAAVDNPNAEDQRQALKKYTLDLTQRAREGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI++GEVP+SL +K++L+LD+A L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVDGEVPDSLRNKRLLVLDLAALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKDDGNTLIFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E +++E D++SKKRL LI
Sbjct: 385 FLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMERMHVEKESDDASKKRLDLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI L+ +YA+L++IWK EK + IK++I+ +++KI +A R+ D+ S+L+YG
Sbjct: 445 DEEIAGLQKEYADLDEIWKAEKAASAGTADIKKQIDDIKVKIEQAKRQGDFARASELEYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNN-----ANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
EL KL SQ+ L NN ANK L +TKVG++E+AEIVSR TGIPVSK+++
Sbjct: 505 ELPKL-------SQQLQALENNPQEQQANK--LFRTKVGADEVAEIVSRMTGIPVSKMME 555
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
ER+KLL +E +L RVVGQ+EA+ AVSNAIRRSRSGL+D +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHNRVVGQNEAVRAVSNAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
LCK L++ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALASFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 605
ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHHIQQMGTSDY 735
Query: 606 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
E +K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L N+ LK
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLAAQNLHLK 795
Query: 666 ISKAALKKISNIGFDLIYGAR 686
+ AAL I+ GFD +YGAR
Sbjct: 796 VDDAALDLIAKAGFDPVYGAR 816
>gi|268601078|ref|ZP_06135245.1| chaperone clpB [Neisseria gonorrhoeae PID18]
gi|268585209|gb|EEZ49885.1| chaperone clpB [Neisseria gonorrhoeae PID18]
Length = 857
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 559/678 (82%), Gaps = 9/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVA +ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVATAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E + +E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + IK++++ +++KI +A R+ D+ S+L+
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELE 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YGEL KL L+ P+ + L +T+VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 559 DKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 619 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 679 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 739 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 798
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 799 AALDIIAKAGFDPIYGAR 816
>gi|433468650|ref|ZP_20426085.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98080]
gi|432205869|gb|ELK61885.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98080]
Length = 859
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ LE +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEIDGLEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSN 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|418288652|ref|ZP_12901108.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM233]
gi|372201432|gb|EHP15363.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM233]
Length = 859
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ LE +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEIDGLEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|385341628|ref|YP_005895499.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240149]
gi|385857525|ref|YP_005904037.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NZ-05/33]
gi|416187148|ref|ZP_11614127.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M0579]
gi|325136561|gb|EGC59163.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M0579]
gi|325201834|gb|ADY97288.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240149]
gi|325208414|gb|ADZ03866.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NZ-05/33]
Length = 859
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|385850947|ref|YP_005897462.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M04-240196]
gi|325205770|gb|ADZ01223.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M04-240196]
Length = 859
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/680 (63%), Positives = 560/680 (82%), Gaps = 11/680 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
Y +L LE R E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEG 558
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTEL
Sbjct: 559 ERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTEL 618
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
CK L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 619 CKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVI 678
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E
Sbjct: 679 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYE 738
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +
Sbjct: 739 AVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL I+ GFD IYGAR
Sbjct: 799 SDAALDIIAKAGFDPIYGAR 818
>gi|433509683|ref|ZP_20466547.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 12888]
gi|433511680|ref|ZP_20468500.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 4119]
gi|432246061|gb|ELL01522.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 12888]
gi|432246327|gb|ELL01778.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 4119]
Length = 859
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/680 (63%), Positives = 560/680 (82%), Gaps = 11/680 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
Y +L LE R E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEG 558
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTEL
Sbjct: 559 ERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTEL 618
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
CK L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 619 CKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVI 678
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E
Sbjct: 679 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYE 738
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +
Sbjct: 739 AVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL I+ GFD IYGAR
Sbjct: 799 SDAALDIIAKAGFDPIYGAR 818
>gi|421540725|ref|ZP_15986866.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93004]
gi|402317972|gb|EJU53498.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93004]
Length = 859
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/680 (63%), Positives = 560/680 (82%), Gaps = 11/680 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
Y +L LE R E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEG 558
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTEL
Sbjct: 559 ERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTEL 618
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
CK L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 619 CKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVI 678
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E
Sbjct: 679 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYE 738
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +
Sbjct: 739 AVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL I+ GFD IYGAR
Sbjct: 799 SDAALDIIAKAGFDPIYGAR 818
>gi|304387133|ref|ZP_07369380.1| chaperone protein ClpB [Neisseria meningitidis ATCC 13091]
gi|304338785|gb|EFM04892.1| chaperone protein ClpB [Neisseria meningitidis ATCC 13091]
Length = 859
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 558/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++ AGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMAAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|416182624|ref|ZP_11612099.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M13399]
gi|325134551|gb|EGC57195.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M13399]
Length = 859
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/680 (63%), Positives = 560/680 (82%), Gaps = 11/680 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
Y +L LE R E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEG 558
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTEL
Sbjct: 559 ERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTEL 618
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
CK L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 619 CKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVI 678
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E
Sbjct: 679 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYE 738
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +
Sbjct: 739 AVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL I+ GFD IYGAR
Sbjct: 799 SDAALDIIAKAGFDPIYGAR 818
>gi|407715566|ref|YP_006836846.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Cycloclasticus sp. P1]
gi|407255902|gb|AFT66343.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Cycloclasticus sp. P1]
Length = 859
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/677 (63%), Positives = 561/677 (82%), Gaps = 6/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE+ L+KY+IDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDQNAEENRQALEKYSIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L SK++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPENLKSKRLLSLDMAALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 DVSKQEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHH V+ITDPAIV+A+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHSVDITDPAIVSAAVLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDE+A++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D++S KRL L+
Sbjct: 385 QLPDKAIDLIDESASRIRMEMDSKPESMDRLERRLIQLKIEREALKKETDDASIKRLQLL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI++L+ +YA+LE++WK EK ++ S Q KEE+EKV+L++ A R D +S+L+YG
Sbjct: 445 ETEIDQLDKEYADLEEVWKSEKAAMQGSAQHKEELEKVKLEMETARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
E+ +LE+ ++E + + FTLL+ KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 EIPRLEKAIQEAEEG-----SGEQDFTLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 560 LLQMEVGLSDRVIGQEEAVKAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+I+RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE
Sbjct: 620 AEFLFDTEEAIVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ + + +K
Sbjct: 680 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELAGEANYNEMK 739
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINRID+ +VF L R I +I +Q++IL+ +L +++L +S+A
Sbjct: 740 SAVMEVVGQHFRPEFINRIDESVVFHPLGRTQIRAITTLQVDILRQRLQDRDIELVVSEA 799
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ GFD +YGAR
Sbjct: 800 ALDKLGEAGFDPVYGAR 816
>gi|385340361|ref|YP_005894233.1| ATP-dependent chaperone ClpB [Neisseria meningitidis G2136]
gi|421566948|ref|ZP_16012689.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3001]
gi|433467617|ref|ZP_20425070.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 87255]
gi|325198605|gb|ADY94061.1| ATP-dependent chaperone ClpB [Neisseria meningitidis G2136]
gi|389605380|emb|CCA44298.1| chaperone protein clpB [Neisseria meningitidis alpha522]
gi|402344891|gb|EJU80024.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3001]
gi|432202038|gb|ELK58106.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 87255]
Length = 859
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ LE +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEIDGLEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|15677326|ref|NP_274481.1| clpB protein [Neisseria meningitidis MC58]
gi|385852913|ref|YP_005899427.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
gi|416196159|ref|ZP_11618005.1| ATP-dependent chaperone ClpB [Neisseria meningitidis CU385]
gi|427827581|ref|ZP_18994613.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
gi|433465416|ref|ZP_20422896.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM422]
gi|433488751|ref|ZP_20445909.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
M13255]
gi|433490817|ref|ZP_20447936.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM418]
gi|433505322|ref|ZP_20462260.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9506]
gi|54035905|sp|Q9JYQ8.1|CLPB_NEIMB RecName: Full=Chaperone protein ClpB
gi|7226713|gb|AAF41829.1| clpB protein [Neisseria meningitidis MC58]
gi|316984618|gb|EFV63583.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
gi|325140588|gb|EGC63108.1| ATP-dependent chaperone ClpB [Neisseria meningitidis CU385]
gi|325199917|gb|ADY95372.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
gi|432202500|gb|ELK58562.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM422]
gi|432222617|gb|ELK78408.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
M13255]
gi|432226583|gb|ELK82309.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM418]
gi|432240614|gb|ELK96148.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9506]
Length = 859
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|187478914|ref|YP_786938.1| ATP-dependent protease ATPase subunit [Bordetella avium 197N]
gi|115423500|emb|CAJ50034.1| ATP-dependent protease, ATPase subunit (chaperone) [Bordetella
avium 197N]
Length = 867
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/679 (63%), Positives = 565/679 (83%), Gaps = 3/679 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGEKVSAAEGESNREALSKYTLDLTERAREGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAGLLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELSQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPDVESTIAILRGLQERYEIHHGVDITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++S +RL I
Sbjct: 384 FLPDKAIDLIDEAASRIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASLRRLAAI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ +L+ +Y + E++WK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG
Sbjct: 444 EEELERLQREYNDYEEVWKAEKAAVQGAQSIKEEIDRVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILK--EKSQKDIQLPN-NANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+L +LE LK + ++ DI+ + K LL+T+VG+EEIAE+VSR TGIPVSK+++ E
Sbjct: 504 KLPELEARLKAADMAESDIERAEAKSGKPKLLRTQVGAEEIAEVVSRATGIPVSKMMEGE 563
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL++E+ L KRVVGQDEA+S V++AIRRSR+GL+D +PYGSF+FLGPTGVGKTEL
Sbjct: 564 RDKLLHMEDALHKRVVGQDEAVSLVADAIRRSRAGLADPSKPYGSFLFLGPTGVGKTELT 623
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
+ L+ +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS++L
Sbjct: 624 RALADFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSVVL 683
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
LDE+EKA+ DVFN+LLQ+LDDG LTD +GRT++FRNT+IVMTSNLGS +I+ M E+
Sbjct: 684 LDEVEKAHPDVFNVLLQVLDDGGLTDGQGRTVDFRNTVIVMTSNLGSQQIQSMSGKPYEV 743
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK VM E+K RPEF+NRID+++VF L+ ++I SIA IQ+ L ++L K M L +S
Sbjct: 744 IKDVVMEELKQTLRPEFLNRIDEVVVFHGLDAQHIESIARIQIKRLASRLEKQEMRLDVS 803
Query: 668 KAALKKISNIGFDLIYGAR 686
AAL +I+ +GFD ++GAR
Sbjct: 804 DAALSEIALVGFDPVFGAR 822
>gi|416177443|ref|ZP_11610041.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M6190]
gi|416192482|ref|ZP_11616664.1| ATP-dependent chaperone ClpB [Neisseria meningitidis ES14902]
gi|433492869|ref|ZP_20449958.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM586]
gi|433502337|ref|ZP_20459307.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM126]
gi|325132627|gb|EGC55316.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M6190]
gi|325138148|gb|EGC60721.1| ATP-dependent chaperone ClpB [Neisseria meningitidis ES14902]
gi|432227164|gb|ELK82875.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM586]
gi|432243011|gb|ELK98526.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM126]
Length = 859
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/680 (63%), Positives = 559/680 (82%), Gaps = 11/680 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVENTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
Y +L LE R E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEG 558
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTEL
Sbjct: 559 ERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTEL 618
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
CK L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 619 CKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVI 678
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E
Sbjct: 679 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYE 738
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +
Sbjct: 739 AVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL I+ GFD IYGAR
Sbjct: 799 SDAALDIIAKAGFDPIYGAR 818
>gi|421555123|ref|ZP_16001060.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98008]
gi|402331402|gb|EJU66739.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98008]
Length = 859
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ LE +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEIDGLEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|399117309|emb|CCG20123.1| chaperone protein ClpB [Taylorella asinigenitalis 14/45]
Length = 856
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/678 (63%), Positives = 560/678 (82%), Gaps = 8/678 (1%)
Query: 10 VNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
+ G + +S Q+ E LKKYT DLTE+AR+GKLDPVIGRDDEIRRAIQ+LQRRSKNNP
Sbjct: 142 IRGDSTVSDQEGESQRQALKKYTTDLTERARMGKLDPVIGRDDEIRRAIQILQRRSKNNP 201
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+N EVP SL K++L LD+A LLAG K+RGEFE+RLK +
Sbjct: 202 VLIGEPGVGKTAIVEGLAQRIVNDEVPESLRGKRVLSLDMASLLAGAKFRGEFEERLKAV 261
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
LKE++ ++ + I+FIDE+HTM+G G EG+IDAGNMLKP LSRGELHCIGATTL+EYR+Y
Sbjct: 262 LKELAQDEGNNIVFIDEIHTMVGAGGAEGAIDAGNMLKPALSRGELHCIGATTLDEYRKY 321
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+L++EPD+E TI+ILRGL+++YE+HHGVEITDPAIVAA+ELS RYI+
Sbjct: 322 IEKDAALERRFQKVLIDEPDVEATIAILRGLKERYEIHHGVEITDPAIVAAAELSNRYIT 381
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAAA+I++EIDSKPE+MD+L+RR+IQLKIE EA++RE DE+SK+RL
Sbjct: 382 DRFLPDKAIDLIDEAAARIRMEIDSKPEVMDRLDRRIIQLKIEREAVRREDDEASKRRLQ 441
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI+ E+ KL+ +Y + E+IWK EK+ + Q I+E+I+KV+ ++ + R+ +++ +S+L+
Sbjct: 442 LIEDELAKLQREYDDYEQIWKAEKSSVHGVQSIREDIDKVKAQMAEYQRQGEYEKLSELQ 501
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YG+L LE LK + ++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER
Sbjct: 502 YGKLPDLELRLKSAEKGEV-------KNQLLRTEVGTEEIAEVVSRATGIPVAKMMQGER 554
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
KLL +E+ L +RVVGQDEA+ VS+AIRRSR+GLSD +PYGSF+FLGPTGVGKTEL K
Sbjct: 555 AKLLTMEDRLHERVVGQDEAVRLVSDAIRRSRAGLSDPSKPYGSFLFLGPTGVGKTELTK 614
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++++ ++RIDMSEF+EKH+++RLIGAPPGYIGYEEGGYLTE +RRKPYS+ILL
Sbjct: 615 ALANFLFDSDDHMVRIDMSEFMEKHTVARLIGAPPGYIGYEEGGYLTEAIRRKPYSVILL 674
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSN+GS I++M E I
Sbjct: 675 DEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNIGSQHIQKMSGEPYEKI 734
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K V +E+K FRPEF+NRID+I+VF L + I +IA IQ+ L +L + M L+IS
Sbjct: 735 KDVVWDELKNSFRPEFLNRIDEIVVFHGLEQDQIANIAKIQIKRLAQRLGQFEMKLEISD 794
Query: 669 AALKKISNIGFDLIYGAR 686
A+ KI+ GFD ++GAR
Sbjct: 795 EAIAKIAEAGFDPVFGAR 812
>gi|59801418|ref|YP_208130.1| ClpB protein [Neisseria gonorrhoeae FA 1090]
gi|268686347|ref|ZP_06153209.1| ClpB protein [Neisseria gonorrhoeae SK-93-1035]
gi|293399276|ref|ZP_06643441.1| ATP-dependent chaperone ClpB [Neisseria gonorrhoeae F62]
gi|59718313|gb|AAW89718.1| putative ClpB protein [Neisseria gonorrhoeae FA 1090]
gi|268626631|gb|EEZ59031.1| ClpB protein [Neisseria gonorrhoeae SK-93-1035]
gi|291610690|gb|EFF39800.1| ATP-dependent chaperone ClpB [Neisseria gonorrhoeae F62]
Length = 859
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|335042180|ref|ZP_08535207.1| ATPase with chaperone activity, ATP-binding subunit [Methylophaga
aminisulfidivorans MP]
gi|333788794|gb|EGL54676.1| ATPase with chaperone activity, ATP-binding subunit [Methylophaga
aminisulfidivorans MP]
Length = 861
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/677 (62%), Positives = 557/677 (82%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGERVTDPNAEEQRQALEKYTIDLTARAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+ + +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDGMKNKRVLALDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEYRQY+E
Sbjct: 265 DLSKQEGQIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V EP +E TI+ILRGL ++YEVHHGV+ITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVIVGEPTVESTIAILRGLAERYEVHHGVDITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLKIE A+K++ D++SKKRL +
Sbjct: 385 KLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKIERMALKKQSDDASKKRLETL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL +Y +LE++WK EK + SQ +KEE+EK RL+++ A R +D++ ++KL+YG
Sbjct: 445 ETEMKKLAREYTDLEEVWKSEKASLHGSQHVKEELEKARLELDAANRSADYEKMAKLQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ LK ++ ++Q +FTLL+ KVG EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 RIPELEKQLKLATEAEMQ------EFTLLRNKVGEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +++ L + V+GQDEA+S+V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLKMDDALHETVIGQDEAVSSVANAIRRSRAGLSDPHRPNGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++IRIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDTQDAMIRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+EM + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSSVIQEMAGEENYDAMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+DD++VF L + I +IA IQL+ L+ +L + +M L +S
Sbjct: 739 AAVMEIVSQHFRPEFINRVDDVVVFHPLQQAQIRAIAEIQLSHLRARLAERDMKLMLSDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I++ GFD +YGAR
Sbjct: 799 ALDLIASEGFDPVYGAR 815
>gi|421556851|ref|ZP_16002761.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 80179]
gi|402336105|gb|EJU71367.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 80179]
Length = 859
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/678 (63%), Positives = 558/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L + VVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRSVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|194098306|ref|YP_002001364.1| putative ClpB protein [Neisseria gonorrhoeae NCCP11945]
gi|268594573|ref|ZP_06128740.1| chaperone clpB [Neisseria gonorrhoeae 35/02]
gi|385335472|ref|YP_005889419.1| putative ClpB protein [Neisseria gonorrhoeae TCDC-NG08107]
gi|193933596|gb|ACF29420.1| putative ClpB protein [Neisseria gonorrhoeae NCCP11945]
gi|268547962|gb|EEZ43380.1| chaperone clpB [Neisseria gonorrhoeae 35/02]
gi|317164015|gb|ADV07556.1| putative ClpB protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 859
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG++E+AEIVSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGADEVAEIVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|421560632|ref|ZP_16006488.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2657]
gi|254669474|emb|CBA03362.1| ATP-dependent protease, ATPase subunit [Neisseria meningitidis
alpha153]
gi|402339801|gb|EJU75010.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2657]
Length = 859
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+L+ EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLLGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|163857486|ref|YP_001631784.1| ATP-dependent protease, ATPase subunit [Bordetella petrii DSM
12804]
gi|163261214|emb|CAP43516.1| ATP-dependent protease, ATPase subunit [Bordetella petrii]
Length = 886
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/676 (63%), Positives = 559/676 (82%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + + E + L KYT+DLT++AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 166 GGENVSAAEGESNREALAKYTLDLTDRARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 225
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 226 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 285
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 286 ELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 345
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 346 KDAALERRFQKVLVNEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDR 405
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+I++EIDSKPE+MDKL+RR+IQLKIE EA+++E D++SK+RL +I
Sbjct: 406 FLPDKAIDLIDEAAARIRMEIDSKPEVMDKLDRRIIQLKIEREAVRKESDDASKRRLAVI 465
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +Y + E+IWK EK ++ +Q IKEEI++VR + + RK + +++L+YG
Sbjct: 466 EEELEKLQREYNDYEEIWKAEKASVQGTQAIKEEIDRVRADMAELQRKGQFDKLAELQYG 525
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK + Q + LL+T+VG+EEIAE+VSR TGIPV+K++Q EREK
Sbjct: 526 KLPELEARLKAADTAEQQGEKADGQPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEREK 585
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL + L
Sbjct: 586 LLQMEDHLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRAL 645
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 646 ADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 705
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK
Sbjct: 706 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGQPYEVIKE 765
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
V +E+K FRPEF+NRID+++VF L ++I SIA IQL L +L + M L++S AA
Sbjct: 766 VVWDELKQSFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLAERLERQEMRLEVSDAA 825
Query: 671 LKKISNIGFDLIYGAR 686
L +++ GFD ++GAR
Sbjct: 826 LAELARAGFDPVFGAR 841
>gi|416160735|ref|ZP_11606242.1| ATP-dependent chaperone ClpB [Neisseria meningitidis N1568]
gi|433473860|ref|ZP_20431219.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97021]
gi|433482370|ref|ZP_20439628.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2006087]
gi|433484407|ref|ZP_20441630.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2002038]
gi|433486678|ref|ZP_20443870.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97014]
gi|325128567|gb|EGC51440.1| ATP-dependent chaperone ClpB [Neisseria meningitidis N1568]
gi|432208789|gb|ELK64761.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97021]
gi|432215090|gb|ELK70980.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2006087]
gi|432220101|gb|ELK75927.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2002038]
gi|432221197|gb|ELK77010.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97014]
Length = 859
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/680 (63%), Positives = 559/680 (82%), Gaps = 11/680 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
Y +L LE R E++ D P N LL+ VG+EEIAE+VSR TGIPVSK+++
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKMMEG 558
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTEL
Sbjct: 559 ERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTEL 618
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
CK L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEG YLTE VRRKPYS+I
Sbjct: 619 CKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGSYLTEQVRRKPYSVI 678
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E
Sbjct: 679 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYE 738
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +
Sbjct: 739 AVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL I+ GFD IYGAR
Sbjct: 799 SDAALDIIAKAGFDPIYGAR 818
>gi|268684092|ref|ZP_06150954.1| ClpB protein [Neisseria gonorrhoeae SK-92-679]
gi|268624376|gb|EEZ56776.1| ClpB protein [Neisseria gonorrhoeae SK-92-679]
Length = 859
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKP+S+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPHSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|254492204|ref|ZP_05105378.1| ATPase, AAA family [Methylophaga thiooxidans DMS010]
gi|224462529|gb|EEF78804.1| ATPase, AAA family [Methylophaga thiooxydans DMS010]
Length = 861
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/677 (62%), Positives = 555/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGERVTDPNAEEQRQALEKFTIDLTARAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI++GEVP + K++L+LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVDGEVPEGMKHKRVLVLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYRQY+E
Sbjct: 265 DLSKQEGSIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V EP +E TI ILRGL ++YEVHHGV+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVIVGEPSVESTIGILRGLSERYEVHHGVDITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE +D+LERRLIQLKIE A+K+E D++SKKRL +
Sbjct: 385 NLPDKAIDLIDEAASRIRMEIDSKPESLDRLERRLIQLKIERVALKKESDDASKKRLDTL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL +Y +LE++WK EK + SQ +KEE+EK R +++ A R +D++ ++KL+YG
Sbjct: 445 EAEMKKLAREYTDLEEVWKSEKAALHGSQHVKEELEKARQELDAANRSADYEKMAKLQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q +FTLL+ KVG EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 RIPELEKQLDMATQAEMQ------EFTLLRNKVGEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL ++ L +RV+GQDEA+S+V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLKMDEALHERVIGQDEAVSSVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYSLILLDE
Sbjct: 619 ATFLFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I+EM + + +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSNVIQEMAGEENYQQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+DD++VF L ++ I +IA+IQL L+ +L + ++ L+++
Sbjct: 739 QAVMEIVGQHFRPEFINRVDDVVVFHPLQQEQIRAIADIQLEHLRQRLAERDIKLQVADE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 799 ALDMIAEAGFDPVYGAR 815
>gi|268598720|ref|ZP_06132887.1| ClpB protein [Neisseria gonorrhoeae MS11]
gi|268582851|gb|EEZ47527.1| ClpB protein [Neisseria gonorrhoeae MS11]
Length = 859
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 559/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPTLARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKP+S+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPHSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|421538432|ref|ZP_15984608.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93003]
gi|402316459|gb|EJU52004.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93003]
Length = 859
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/678 (63%), Positives = 558/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLG TGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|319941466|ref|ZP_08015794.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Sutterella
wadsworthensis 3_1_45B]
gi|319805086|gb|EFW01916.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Sutterella
wadsworthensis 3_1_45B]
Length = 872
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/662 (63%), Positives = 554/662 (83%), Gaps = 3/662 (0%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
LKKYTIDLTE+AR GKLDPVIGRDDEIRR +Q+LQRR+KNNPVLIGEPGVGKTA+VEGLA
Sbjct: 161 LKKYTIDLTERARQGKLDPVIGRDDEIRRTMQILQRRTKNNPVLIGEPGVGKTAVVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+N EVP++L +K IL LD+A L+AG KYRGEFE+RLKK+L+E++ + II+FIDE+
Sbjct: 221 QRIVNNEVPDTLRNKVILSLDMAGLIAGAKYRGEFEERLKKLLQEVTAQEGKIILFIDEI 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HT++G GK EGS+DAGNMLKP L+RGELH IGATTL+EYR+Y+EKDAA ERRFQK+ V+E
Sbjct: 281 HTVVGAGKTEGSMDAGNMLKPALARGELHVIGATTLDEYRKYVEKDAALERRFQKVFVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGLQ+KYE HHGVEITDPAIVAA+ELS+RYI+DR++PDKAIDLIDEAAA+
Sbjct: 341 PSVEDTIAILRGLQEKYEAHHGVEITDPAIVAAAELSHRYITDRYLPDKAIDLIDEAAAR 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
+K+EIDSKPE +DKL+RRLIQLKIE EA+K+E D++SKKRL I+ EI KL +YA+LE+
Sbjct: 401 VKMEIDSKPEALDKLDRRLIQLKIEREAMKKETDDASKKRLAAIEAEIEKLSREYADLEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK--EKSQ 384
+WK EK+ + +++EI++VR ++++ R++ ++ +++L+Y L KLE LK EK++
Sbjct: 461 VWKKEKSEALGEKSVRDEIDRVRRQMDEYRRQAQYEKLAELQYAVLPKLEEKLKRAEKAE 520
Query: 385 KDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 444
KD + LL+T VG+EEIAE+VSR TGIPVSK+++ ER+KLL++ + L KRV+G
Sbjct: 521 KDTEKTEKGGP-KLLRTSVGAEEIAEVVSRATGIPVSKMMEGERQKLLHMADALEKRVIG 579
Query: 445 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 504
QDEA+ V+ I RSR+GLSD RPYGSF+FLGPTGVGKTEL K L+ +F+ +E++IRI
Sbjct: 580 QDEAVKRVTETILRSRAGLSDPNRPYGSFLFLGPTGVGKTELTKALAEFLFDTDEAMIRI 639
Query: 505 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 564
DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ
Sbjct: 640 DMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQ 699
Query: 565 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 624
+LDDGR+TD +GRT++F+N +IVMTSNLGS +I+EM+ ++ IK AVM EV+ +FRPEF
Sbjct: 700 VLDDGRMTDGQGRTVDFKNCVIVMTSNLGSAEIQEMQGEPQDKIKSAVMQEVRAHFRPEF 759
Query: 625 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 684
+NRID+I+VF L+ N+ IA IQL L+ ++ + L +++AAL +I+ +GFD +G
Sbjct: 760 VNRIDEIVVFNSLDAANVRKIAEIQLEQLRKRMTAQQIGLDVTEAALDEIAKVGFDPQFG 819
Query: 685 AR 686
AR
Sbjct: 820 AR 821
>gi|421559550|ref|ZP_16005423.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 92045]
gi|402335349|gb|EJU70615.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 92045]
Length = 859
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/678 (63%), Positives = 558/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLG TGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|319943320|ref|ZP_08017603.1| chaperone protein ClpB [Lautropia mirabilis ATCC 51599]
gi|319743862|gb|EFV96266.1| chaperone protein ClpB [Lautropia mirabilis ATCC 51599]
Length = 877
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/699 (62%), Positives = 575/699 (82%), Gaps = 14/699 (2%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+ + SL G+ + SQ E LKKYT+DLTE+AR GKLDPVIGRDDEIRR
Sbjct: 134 GLTHKSLQAAVDAVRGGQAVESQDAEGQREALKKYTLDLTERARAGKLDPVIGRDDEIRR 193
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
IQ+LQRRSKNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL +K++L LD+A LLAG
Sbjct: 194 TIQILQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKNKRVLALDMAALLAGA 253
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRGEFE+RLK +LK+I+ ++ I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELH
Sbjct: 254 KYRGEFEERLKAVLKDIAADEGRTIVFIDEIHTMVGAGKSDGAMDAGNMLKPALARGELH 313
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
C+GATTL+EYR+YIEKDAA ERRFQK+LV EP +E TI+ILRGLQ++YE+HHGVEITDPA
Sbjct: 314 CVGATTLDEYRKYIEKDAALERRFQKVLVGEPSVESTIAILRGLQERYEIHHGVEITDPA 373
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS RYI+DRF+PDKAIDLIDEAA++IK+EIDSKPE+MD+L+RRLIQLKIE EA+
Sbjct: 374 IVAAAELSNRYITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDRLDRRLIQLKIEREAV 433
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
++E D++SKKRL LI++EI ++ +YA+ E+I K EK ++ S QIK EI+++R ++ +
Sbjct: 434 RKETDDASKKRLELIEQEIARISKEYADYEEILKAEKAAVQGSAQIKGEIDQLRAQMAEL 493
Query: 356 TRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNN----ANKFTLLKTKVGSEEIAEI 411
RK ++ +++L+YG+L +LE+ L E + + L + + K LL+T VG+EEIAE+
Sbjct: 494 QRKGQYEKLAELQYGKLPELEKRLAEVNAAETNLKADEAAVSGKPKLLRTVVGAEEIAEV 553
Query: 412 VSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYG 471
VSR TGIPVSK+++ EREKLL +E L KRVVGQDEA++ VS+AIRRSR+GL+D RP+G
Sbjct: 554 VSRATGIPVSKMMEGEREKLLKMEEELHKRVVGQDEAVTLVSDAIRRSRAGLADPNRPWG 613
Query: 472 SFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEG 531
SF+FLGPTGVGKTELCK L+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEG
Sbjct: 614 SFLFLGPTGVGKTELCKALARFMFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEG 673
Query: 532 GYLTEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSN 591
GYLTE VRR PYS+ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSN
Sbjct: 674 GYLTEAVRRNPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSN 733
Query: 592 LGSDKIKEMEK----GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIAN 647
+GS +I+ + D ++IK AVM EV+ +FRPEFINRID+++VF L+ K+I I+
Sbjct: 734 IGSAEIQRLSADKTLNDPDVIKEAVMGEVRQHFRPEFINRIDEVVVFHGLDAKHIRDISV 793
Query: 648 IQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
IQL L+ +L + ++ L++S AAL +++ +GFD +YGAR
Sbjct: 794 IQLKSLEKRLAERDLKLEVSDAALDELAKVGFDPLYGAR 832
>gi|397667476|ref|YP_006509013.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
gi|395130887|emb|CCD09136.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
Length = 858
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/677 (63%), Positives = 554/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDPNAEEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ +
Sbjct: 385 QLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K I++LE Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG
Sbjct: 445 QKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + + IK
Sbjct: 679 VEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ L+++
Sbjct: 739 AAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALSHLAEAGFDPVYGAR 815
>gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Lens]
gi|53754469|emb|CAH15953.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Lens]
Length = 858
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/677 (63%), Positives = 554/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDPNAEEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ +
Sbjct: 385 QLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K I++LE Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG
Sbjct: 445 QKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + + IK
Sbjct: 679 VEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ L+++
Sbjct: 739 AAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALSHLAEAGFDPVYGAR 815
>gi|348618449|ref|ZP_08884974.1| Heat-shock protein, ATP-dependent Chaperone protein ClpB
[Candidatus Glomeribacter gigasporarum BEG34]
gi|347816249|emb|CCD29719.1| Heat-shock protein, ATP-dependent Chaperone protein ClpB
[Candidatus Glomeribacter gigasporarum BEG34]
Length = 863
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/677 (64%), Positives = 558/677 (82%), Gaps = 1/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E LKKYT+DLT +AR KLDPVIGRDDEIRR+IQ+LQRR+KNNPVL
Sbjct: 145 GGEPVRSQDAENQREALKKYTVDLTGRARADKLDPVIGRDDEIRRSIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLALDMAALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ I+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DIAKDKGQTIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVKEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA IK+EIDSKPE MD+LERRLIQLKIE EA+K+E DE+S+KRL LI
Sbjct: 385 FLPDKAIDLIDEAAACIKMEIDSKPEAMDRLERRLIQLKIEREAVKKEKDEASQKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +L+ +YA+LE+IW EK+ + S Q+KE+I++ R +I + R+ V++L+YG
Sbjct: 445 EEEIQRLDKEYADLEEIWTAEKSAAQGSAQLKEDIDRARAEIARLQREGKLDKVAELQYG 504
Query: 371 ELNKLERILKEKSQKDI-QLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L +LE LK +Q + + + LL+T+VG+EEIAE++SR TGIPV++++Q ERE
Sbjct: 505 KLPELEAQLKRVAQAEAGRTAQPEARARLLRTQVGAEEIAEVISRATGIPVARMMQGERE 564
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KL+ IE L +RVV QDEAI AV+NAIRRSR+GL+D RPYGSF+FLGPTGVGKTELCK
Sbjct: 565 KLMQIEAKLHERVVAQDEAIDAVANAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKA 624
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+A +F +E +IRIDMSEF EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+ILLD
Sbjct: 625 LAAFLFGDETHLIRIDMSEFGEKHSVARLIGAPPGYVGYEEGGYLTETVRRTPYSVILLD 684
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
EIEKA++++FN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLG+ I+ M ++ ++
Sbjct: 685 EIEKAHAEIFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGAHLIQSMIGEPRDAMR 744
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AV NEV+ F+PEF+NRID+++VF L+R NI SIA IQL L +L K++M L IS A
Sbjct: 745 EAVWNEVRQSFKPEFLNRIDEVVVFDALDRSNIESIARIQLGRLAERLSKLDMQLDISDA 804
Query: 670 ALKKISNIGFDLIYGAR 686
AL +I +IG+D +GAR
Sbjct: 805 ALAQIGSIGYDPSFGAR 821
>gi|433537418|ref|ZP_20493913.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 77221]
gi|432271183|gb|ELL26309.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 77221]
Length = 859
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/678 (63%), Positives = 557/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D +PYGSF+FLG TGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L ++ LK+
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQSNIRSIAKIQLKGLEKRLEAQHLHLKVDD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD +YGAR
Sbjct: 801 AALDLIAKAGFDPVYGAR 818
>gi|54297663|ref|YP_124032.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Paris]
gi|296107341|ref|YP_003619041.1| ATP-dependent Clp protease [Legionella pneumophila 2300/99 Alcoy]
gi|53751448|emb|CAH12866.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Paris]
gi|295649242|gb|ADG25089.1| ATP-dependent Clp protease [Legionella pneumophila 2300/99 Alcoy]
gi|307610448|emb|CBX00019.1| endopeptidase Clp ATP-binding chain B [Legionella pneumophila 130b]
Length = 858
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/677 (63%), Positives = 554/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDPNAEEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAAMLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ +
Sbjct: 385 QLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K I++LE Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG
Sbjct: 445 QKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + + IK
Sbjct: 679 VEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ L+++
Sbjct: 739 AAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALSHLAEAGFDPVYGAR 815
>gi|397664204|ref|YP_006505742.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
gi|395127615|emb|CCD05814.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
Length = 858
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/677 (63%), Positives = 553/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDPNAEEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ +
Sbjct: 385 QLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K I++LE Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG
Sbjct: 445 QKSIDELEQSYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + IK
Sbjct: 679 VEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYNEIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ L+++
Sbjct: 739 AAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALSHLAEAGFDPVYGAR 815
>gi|385338300|ref|YP_005892173.1| chaperone ClpB (short) [Neisseria meningitidis WUE 2594]
gi|433475890|ref|ZP_20433227.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 88050]
gi|433517864|ref|ZP_20474607.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 96023]
gi|433524413|ref|ZP_20481071.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97020]
gi|319410714|emb|CBY91096.1| chaperone ClpB (short) [Neisseria meningitidis WUE 2594]
gi|432208999|gb|ELK64970.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 88050]
gi|432252608|gb|ELL07960.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 96023]
gi|432258640|gb|ELL13921.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97020]
Length = 859
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/678 (63%), Positives = 557/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDE + AVS+AIRRSRSGL+D +PYGSF+FLG TGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDETVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|292492354|ref|YP_003527793.1| ATP-dependent chaperone ClpB [Nitrosococcus halophilus Nc4]
gi|291580949|gb|ADE15406.1| ATP-dependent chaperone ClpB [Nitrosococcus halophilus Nc4]
Length = 865
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/677 (63%), Positives = 550/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L++YTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGRQVNEPGAEDQRQALERYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP L +++L LD+ L+AG K+RGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNSEVPEGLKHRRLLALDMGALIAGAKFRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+IS + +II+FIDELHT++G GK EG++DA NMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DISKAEGNIILFIDELHTVVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL ++YEVHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSLEDTIAILRGLNERYEVHHGVEITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MD++ERRL+QLKIE EA+++E DE+SKKRL +
Sbjct: 385 KLPDKAIDLIDEAASRIRMEIDSKPEPMDRMERRLVQLKIEREALRKETDEASKKRLETL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EIN LE +YA+LE+IWK EK + +Q IKE++E+ RL+++ A R D +S+L+YG
Sbjct: 445 ETEINHLEKEYADLEEIWKAEKAALSGAQGIKEKLEQARLELDSARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +L++ Q D F LL+ KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 QIPELQK------QLDAATAAEQQDFKLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQ+EAI VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEEALHRRVVGQEEAIEVVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ EE+++RIDMSEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AAFLFDTEEAMVRIDMSEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD GRT++FRNT++VMTSNLGS I+EM + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVVVMTSNLGSHVIQEMAGEEHYQEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+DD++VF L + I +IA +Q+ L+ +L + +MDL +S+
Sbjct: 739 NAVMEIVGQHFRPEFINRVDDVVVFHPLLKGQIRAIAKLQIGHLQQRLRERDMDLAVSET 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL K++ +GFD +YGAR
Sbjct: 799 ALDKLAEVGFDPVYGAR 815
>gi|254493514|ref|ZP_05106685.1| ClpB protein [Neisseria gonorrhoeae 1291]
gi|226512554|gb|EEH61899.1| ClpB protein [Neisseria gonorrhoeae 1291]
Length = 859
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/678 (63%), Positives = 558/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPTLARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EI+ L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEIDGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D +PYGSF+FLGPTGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKP+S+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPHSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD + RT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQDRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI SIA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|148359294|ref|YP_001250501.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Corby]
gi|148281067|gb|ABQ55155.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Corby]
Length = 858
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/677 (63%), Positives = 554/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDPNAEEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAAMLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ +
Sbjct: 385 QLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K I++LE Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG
Sbjct: 445 QKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + + IK
Sbjct: 679 VEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ L+++
Sbjct: 739 AAVMDLVSQHFRPEFINRIDESVVFHSLAKEQIAKIAAIQINYLHHRLKQQNITLEVTNE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALSHLAEAGFDPVYGAR 815
>gi|300114805|ref|YP_003761380.1| ATP-dependent chaperone ClpB [Nitrosococcus watsonii C-113]
gi|299540742|gb|ADJ29059.1| ATP-dependent chaperone ClpB [Nitrosococcus watsonii C-113]
Length = 865
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/677 (63%), Positives = 549/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L++YTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQQVNEPGAEDQRQALERYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIIN EVP L ++++L LD+ L+AG K+RGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINSEVPEGLKNRRLLALDMGALIAGAKFRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+IS + +II+FIDELHT++G GK EG++DA NMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DISKAEGNIILFIDELHTVVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEYRRYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+TI+ILRGL ++YEVHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPNVEDTIAILRGLSERYEVHHGVEITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA++RE DE+SK+RL +
Sbjct: 385 KLPDKAIDLIDEAASRIRMEIDSKPEPMDRLERRLIQLKIEREALRRETDEASKRRLETL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+LE +YA+LE+IWK EK + +Q IKE++E+ RL + A R D +S+L+YG
Sbjct: 445 ETELNQLEKEYADLEEIWKAEKATLSGAQGIKEQLEQARLDLESAHRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +L++ Q D + F LL+ KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 RIPELQK------QLDAATAVEQHDFKLLRNKVSEEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI+ VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEAALHQRVVGQDEAIAVVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AMFLFDTEEAMVRIDMSEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD GRT++FRNT++VMTSNLGS I+EM D+ + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVVVMTSNLGSHVIQEMAGEDRYQEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+DD++VF L ++ + +IA IQ+ L+ +L + +M L I +
Sbjct: 739 SAVMEIVGQHFRPEFINRVDDVVVFHPLQKEQLQAIAQIQMGYLRQRLAQRDMVLTIPED 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL K++ GFD +YGAR
Sbjct: 799 ALSKLAEAGFDPVYGAR 815
>gi|52841977|ref|YP_095776.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|378777611|ref|YP_005186049.1| ClpB protein [Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|52629088|gb|AAU27829.1| ClpB protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364508426|gb|AEW51950.1| ClpB protein [Legionella pneumophila subsp. pneumophila ATCC 43290]
Length = 858
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/677 (63%), Positives = 554/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDPNAEEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL+ +
Sbjct: 385 QLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKRLVDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K I++LE Y++LE+IWK EK ++ S QIKE +E+ +L++ A R D +S+L+YG
Sbjct: 445 QKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + S D A + L++ KV +EIAE+VS+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L R++GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM K + + IK
Sbjct: 679 VEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID+ +VF L ++ I IA IQ+N L ++L + N+ ++++
Sbjct: 739 AAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITIEVTSE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALSHLAEAGFDPVYGAR 815
>gi|422348530|ref|ZP_16429423.1| chaperone ClpB [Sutterella wadsworthensis 2_1_59BFAA]
gi|404659231|gb|EKB32085.1| chaperone ClpB [Sutterella wadsworthensis 2_1_59BFAA]
Length = 864
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/660 (63%), Positives = 551/660 (83%), Gaps = 3/660 (0%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
LKKYT+DLTE+AR GKLDPVIGRDDEIRR +Q+LQRRSKNNPVLIGEPGVGKTA+VEGLA
Sbjct: 161 LKKYTVDLTERARQGKLDPVIGRDDEIRRTMQILQRRSKNNPVLIGEPGVGKTAVVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+N EVP+SL K+IL LD+A L+AG KYRGEFE+RLKK+LKE++ II+FIDEL
Sbjct: 221 QRIVNNEVPDSLRGKRILSLDMAGLIAGAKYRGEFEERLKKLLKEVTAESGRIILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HT++G GK EGS+DAGNMLKP LSRGELH IGATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 281 HTVVGAGKTEGSMDAGNMLKPALSRGELHVIGATTLDEYRKYVEKDAALERRFQKVLVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGLQ++YE HHGVEITDPAIVAA+ELS+RYI+DRF+PDKAIDLIDEAAA+
Sbjct: 341 PSVEDTIAILRGLQERYEAHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
+K+EIDSKPE +DKL+RRLIQLKIE EA+K+E D++SKKRL I+ EI+KL +YA+LE+
Sbjct: 401 VKMEIDSKPEALDKLDRRLIQLKIEREAMKKETDDASKKRLQAIEDEIDKLSREYADLEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+WK EK+ ++ +++EI++ R ++ + R + ++ +++L+Y L KLE LK+ + +
Sbjct: 461 VWKKEKSEALGAKSVRDEIDRTRHQMEEYRRTAQYEKLAELQYAVLPKLEERLKKAEKAE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+A K LL+T VG+EEIAE+VSR TGIPV+K+++ ER+KLL++++ L +RVVGQD
Sbjct: 521 ---AGDAPKPKLLRTTVGAEEIAEVVSRATGIPVAKMMEGERQKLLHMKDALEERVVGQD 577
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ V+ I RSR+GLSD RPYGSF+FLGPTGVGKTEL K L+ +F+ E++++RIDM
Sbjct: 578 EAVKRVAETILRSRAGLSDPNRPYGSFLFLGPTGVGKTELTKALAQFLFDTEDALVRIDM 637
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 638 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRHPYSVILLDEVEKAHPDVFNVLLQVL 697
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 626
DDGR+TD +GRT++F+NT+IVMTSNLGS +I+EM +E +K AVM EV+ +FRPEFIN
Sbjct: 698 DDGRMTDGQGRTVDFKNTVIVMTSNLGSSEIQEMIGESRESVKNAVMTEVREHFRPEFIN 757
Query: 627 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
RID+I++F L + I IA IQL L+ ++ ++ L+++ A+ +++ +GFD YGAR
Sbjct: 758 RIDEIVIFNSLGSEAIRRIAAIQLKSLQARVAAQDVTLEVTDEAMAELAEVGFDPHYGAR 817
>gi|433516062|ref|ZP_20472828.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2004090]
gi|433528540|ref|ZP_20485149.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3652]
gi|433530748|ref|ZP_20487332.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3642]
gi|433533013|ref|ZP_20489574.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2007056]
gi|433534808|ref|ZP_20491345.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2001212]
gi|432252388|gb|ELL07744.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2004090]
gi|432265341|gb|ELL20537.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3652]
gi|432265558|gb|ELL20750.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3642]
gi|432265978|gb|ELL21167.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2007056]
gi|432270815|gb|ELL25949.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
2001212]
Length = 859
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/678 (63%), Positives = 556/678 (82%), Gaps = 7/678 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
NVN N Q+D LKKYT+DLT++AR GKLDPVIGRDDEIRRAIQVLQRR+KNNP
Sbjct: 148 NVNDANAEDQRD-----ALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + + +IFIDE+HT++G GK + ++DAGNMLKP L+RGELHCIGATTL+EYRQY
Sbjct: 263 LNDLAKDDGNTLIFIDEIHTLVGAGKTDSAMDAGNMLKPALARGELHCIGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS RYI+
Sbjct: 323 IEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E +++E D++SKKRL
Sbjct: 383 DRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLE 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
LI +EIN L+ +YA+L++IWK EK + + IK++I++V++KI +A R+ D SKL
Sbjct: 443 LIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLM 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
Y +L LE+ + D ANK LL+ VG+EEIAE+VSR TGIPVSK+++ ER
Sbjct: 503 YEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMMEGER 560
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E +L +RVVGQDE + AVS+AIRRSRSGL+D +PYGSF+FLG TGVGKTELCK
Sbjct: 561 DKLLKMEEVLHRRVVGQDETVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTELCK 620
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 621 ALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILL 680
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS I++M D E +
Sbjct: 681 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM +VK +FRPE INRID+++VF L++ NI +IA IQL L+ +L K N+ L +S
Sbjct: 741 KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I+ GFD IYGAR
Sbjct: 801 AALDIIAKAGFDPIYGAR 818
>gi|303257688|ref|ZP_07343700.1| ATP-dependent chaperone protein ClpB [Burkholderiales bacterium
1_1_47]
gi|331000598|ref|ZP_08324260.1| ATP-dependent chaperone protein ClpB [Parasutterella
excrementihominis YIT 11859]
gi|302859658|gb|EFL82737.1| ATP-dependent chaperone protein ClpB [Burkholderiales bacterium
1_1_47]
gi|329571196|gb|EGG52898.1| ATP-dependent chaperone protein ClpB [Parasutterella
excrementihominis YIT 11859]
Length = 865
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/685 (62%), Positives = 570/685 (83%), Gaps = 3/685 (0%)
Query: 3 IKNNSLNV-NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQ 61
++N L+V G+ + + + E + LKKYT+DLTEKA+ GKLDPVIGRDDEIRRA+Q+LQ
Sbjct: 136 LENAILSVRGGEKVDNPEAENNREALKKYTVDLTEKAKEGKLDPVIGRDDEIRRAMQILQ 195
Query: 62 RRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEF 121
RRSKNNPVLIGEPGVGKTA+VEGLAQRI+NGEVP++L +K++L LD+A L+AG KYRGEF
Sbjct: 196 RRSKNNPVLIGEPGVGKTAVVEGLAQRIVNGEVPDTLRNKRVLSLDMAGLVAGAKYRGEF 255
Query: 122 EDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATT 181
E+RLK +LKE+ + II+FIDE+HT++G GK EG++DAGNMLKP LSRGELH IGATT
Sbjct: 256 EERLKALLKEVVAEEGRIILFIDEIHTVVGAGKTEGAMDAGNMLKPALSRGELHVIGATT 315
Query: 182 LNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASE 241
L+EYR+YIEKD A ERRFQK++V EP +E+TI+ILRGLQ+KYEVHHGVEITDPAIVAA+E
Sbjct: 316 LDEYRKYIEKDPALERRFQKVIVNEPSVEDTIAILRGLQEKYEVHHGVEITDPAIVAAAE 375
Query: 242 LSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDE 301
LS RYI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE +DKL+RRLIQLKIE EA+K+E DE
Sbjct: 376 LSARYITDRFLPDKAIDLIDEAAARIKMEIDSKPEELDKLDRRLIQLKIEREAVKKEKDE 435
Query: 302 SSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDW 361
+SKKRL +++EI KL +Y++LE+IWK EK S+++++EI+K++ K+ + R +
Sbjct: 436 ASKKRLSGLEEEIAKLSREYSDLEEIWKKEKNAALGSKEVRDEIDKLKTKMEELRRSGKY 495
Query: 362 QTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVS 421
+ ++ ++YG+L +LE+ L ++ +++ +L + K LL+T+VG+EEIAE+VSR TGIPVS
Sbjct: 496 EELAAIQYGKLPELEKQLVKEEKEETKLYDEKPK--LLRTQVGAEEIAEVVSRATGIPVS 553
Query: 422 KIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGV 481
K+++ ER+KLL++ + KRVVGQ EA+ V +AI RSR+GLSD RPYGSF+FLGPTGV
Sbjct: 554 KMMEGERQKLLDMAKYIGKRVVGQKEAVDKVVDAILRSRAGLSDPNRPYGSFLFLGPTGV 613
Query: 482 GKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRK 541
GKTEL K L+ +F+ E+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRK
Sbjct: 614 GKTELTKALAEFLFDTEDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRK 673
Query: 542 PYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME 601
PYS+ILLDE+EKA+ DVFNILLQ LDDGR+TD +GRT++F+NT+I+MTSNLGS +I +
Sbjct: 674 PYSVILLDEVEKAHPDVFNILLQALDDGRMTDGQGRTVDFKNTVIIMTSNLGSQEIMNRQ 733
Query: 602 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 661
D E++K AVM+EVK +FRPEFINRID+I+VF L++K I IA IQ+ L ++ + N
Sbjct: 734 GEDPEVVKEAVMDEVKKHFRPEFINRIDEIVVFNALDQKAIREIARIQIRKLAKRMEQQN 793
Query: 662 MDLKISKAALKKISNIGFDLIYGAR 686
+ L +++AAL +I +GFD ++GAR
Sbjct: 794 IGLDVTEAALDEIGKVGFDPLFGAR 818
>gi|357406325|ref|YP_004918249.1| Chaperone protein ClpB [Methylomicrobium alcaliphilum 20Z]
gi|351718990|emb|CCE24664.1| Chaperone protein ClpB [Methylomicrobium alcaliphilum 20Z]
Length = 859
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/677 (63%), Positives = 550/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+NI EE L KYTI+LTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQNIDDANAEEQRQALSKYTINLTEQAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + K++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKGKQLLSLDMAALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ Q +I+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 DIAKQQGQVILFVDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+TI+ILRGL++KYEVHHGV+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPNVEDTIAILRGLKEKYEVHHGVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE MD+L+RRLIQLKIE EA+K E DE+SKKRL +
Sbjct: 385 QLPDKAIDLVDEAASRIRMEIDSKPEAMDRLDRRLIQLKIEREALKNETDEASKKRLESL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I LE +Y+ ++IWK EK ++ + IKE +E+ RL++ A+R +D +S+L+YG
Sbjct: 445 EEAIENLEKEYSEFDEIWKAEKAALQGTTAIKERLEQARLELEVASRANDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ L + L SQ ++Q + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPSLVKELDLASQAEMQ------EMKLLRNKVTDEEIAEVVSKWTGIPVSKMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + KRVVGQ EA+ +VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEQIQKRVVGQTEALISVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN ++VMTSNLGSD+I+E+ + +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVVVMTSNLGSDRIQELAGEENYAAMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINRIDD++VF L R I SI +IQ+ L+ +LL ++DL++S+A
Sbjct: 739 SAVMEVVGYHFRPEFINRIDDVVVFHPLGRDQIRSITDIQIRYLRKRLLDHDIDLELSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ GFD +YGAR
Sbjct: 799 ALDKLGEAGFDPVYGAR 815
>gi|77165844|ref|YP_344369.1| ATP-dependent Clp protease [Nitrosococcus oceani ATCC 19707]
gi|254434018|ref|ZP_05047526.1| ATPase, AAA family [Nitrosococcus oceani AFC27]
gi|76884158|gb|ABA58839.1| ATP-dependent Clp protease [Nitrosococcus oceani ATCC 19707]
gi|207090351|gb|EDZ67622.1| ATPase, AAA family [Nitrosococcus oceani AFC27]
Length = 865
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/677 (62%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L++YTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQQVNEPGAEDQRQALERYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIIN EVP L ++++L LD+ L+AG K+RGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINSEVPEGLKNRRLLALDMGALIAGAKFRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+IS + +II+FIDELHT++G GK EG++DA NMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DISKAEGNIILFIDELHTVVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEYRRYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+TI+ILRGL ++YEVHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPNVEDTIAILRGLSERYEVHHGVEITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDE+A++I++EIDSKPE MD+LERRLIQLKIE EA++RE DE+S++RL +
Sbjct: 385 KLPDKAIDLIDESASRIRMEIDSKPEPMDRLERRLIQLKIEREALRRETDEASRRRLETL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+LE +YA+LE+IWK EK + +Q IKE++E+ RL + A R D +S+L+YG
Sbjct: 445 ETELNQLEKEYADLEEIWKAEKATLSGAQGIKEQLEQARLDLESAHRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +L++ Q D F LL+ KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 RIPELQK------QLDAATAVEQQDFKLLRNKVSEEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEA++ VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLQMEAALHQRVVGQDEAVAVVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ EE+++RIDMSEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AAFLFDTEEAMVRIDMSEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD GRT++FRNT++VMTSNLGS I+EM D+ + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVVVMTSNLGSHVIQEMAGEDRYQEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+DD++VF L + + +IA IQ+ L+ +L + M L I +
Sbjct: 739 SAVMEIVGQHFRPEFINRVDDVVVFHPLQKAQLQAIAQIQIGYLQQRLAQREMVLTIPEE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL K++ GFD +YGAR
Sbjct: 799 ALSKLAEAGFDPVYGAR 815
>gi|424776135|ref|ZP_18203120.1| ATP-dependent protease, ATPase subunit [Alcaligenes sp. HPC1271]
gi|422888595|gb|EKU30981.1| ATP-dependent protease, ATPase subunit [Alcaligenes sp. HPC1271]
Length = 863
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/715 (62%), Positives = 575/715 (80%), Gaps = 13/715 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ + + + L KYT DLTE+ARLGKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 145 GGANVNDAEGDSNREALDKYTTDLTERARLGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L+LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNNEVPETLKGKRVLVLDLAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + I+FIDELHTM+G GK EG++DAGNMLKP LSRGELHCIGATTLNEYRQYIE
Sbjct: 265 ELSKDDGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGV ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVNEPDMESTIAILRGLQERYELHHGVAITDPAIVAAAELSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+I++EIDSKPE+MDKL+RR+IQLKIE EA+ ++ DE+S++RL I
Sbjct: 385 FLPDKAIDLIDEAAARIRMEIDSKPEVMDKLDRRIIQLKIEREAVIKDTDEASQRRLQAI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ KL+ +Y + E+IWK EK ++ SQ +KEEIEKVR ++ + RK + +++L+YG
Sbjct: 445 NDEMEKLQREYNDYEEIWKAEKAAVQGSQVVKEEIEKVRAEMAELQRKGQFDKLAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK ++ ++ + +K LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 505 KLPELEERLK-AAEANMDKADQ-DKPRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRVVGQ EA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTEL K L
Sbjct: 563 LLQMEDYLHKRVVGQGEAVRLVSDAIRRSRAGLSDPSRPYGSFLFLGPTGVGKTELTKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 623 ANFLFDSEDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS I+ + ++IK
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQRLSGEPYDVIKE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
V EVK +FRPEF+NRID+++VF L ++I SIA IQL L +L + +M L++S+AA
Sbjct: 743 VVWEEVKQHFRPEFLNRIDEVVVFHGLEAEHIESIARIQLERLDQRLAQRDMHLEVSEAA 802
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 725
L +++ GFD ++GAR + K+++ + H ++P A I G GP+ +
Sbjct: 803 LAQLAKAGFDPVFGARPL---KRAI-----QQHIENPVARLILEGRF---GPKDV 846
>gi|33602268|ref|NP_889828.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
RB50]
gi|427814108|ref|ZP_18981172.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
1289]
gi|54035816|sp|Q7WHB6.1|CLPB_BORBR RecName: Full=Chaperone protein ClpB
gi|33576707|emb|CAE33785.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
RB50]
gi|410565108|emb|CCN22660.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
1289]
Length = 865
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/677 (63%), Positives = 559/677 (82%), Gaps = 1/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGESNREALSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +Y + E+IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG
Sbjct: 444 EEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L +LE LK + + +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+
Sbjct: 504 KLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERD 563
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+ L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL +
Sbjct: 564 KLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRA 623
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 624 LADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 683
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK
Sbjct: 684 EVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIK 743
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V +E+K FRPEF+NRID+++VF L ++I SIA IQL L +L K M L +S A
Sbjct: 744 EVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDA 803
Query: 670 ALKKISNIGFDLIYGAR 686
AL +I+ GFD ++GAR
Sbjct: 804 ALAEIARSGFDPVFGAR 820
>gi|408415770|ref|YP_006626477.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis 18323]
gi|410419648|ref|YP_006900097.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
MO149]
gi|412338419|ref|YP_006967174.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
253]
gi|427821419|ref|ZP_18988482.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
D445]
gi|427823388|ref|ZP_18990450.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
Bbr77]
gi|401777940|emb|CCJ63301.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis 18323]
gi|408446943|emb|CCJ58614.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
MO149]
gi|408768253|emb|CCJ53014.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
253]
gi|410572419|emb|CCN20695.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
D445]
gi|410588653|emb|CCN03713.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
Bbr77]
Length = 865
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/677 (63%), Positives = 559/677 (82%), Gaps = 1/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGESNREALSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +Y + E+IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG
Sbjct: 444 EEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L +LE LK + + +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+
Sbjct: 504 KLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERD 563
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+ L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL +
Sbjct: 564 KLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRA 623
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 624 LADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 683
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK
Sbjct: 684 EVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIK 743
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V +E+K FRPEF+NRID+++VF L ++I SIA IQL L +L K M L +S A
Sbjct: 744 EVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDA 803
Query: 670 ALKKISNIGFDLIYGAR 686
AL +I+ GFD ++GAR
Sbjct: 804 ALAEIARSGFDPVFGAR 820
>gi|33596441|ref|NP_884084.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis
12822]
gi|54035815|sp|Q7W9E6.1|CLPB_BORPA RecName: Full=Chaperone protein ClpB
gi|33566210|emb|CAE37116.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis]
Length = 865
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/677 (63%), Positives = 559/677 (82%), Gaps = 1/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGESNREALSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +Y + E+IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG
Sbjct: 444 EEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L +LE LK + + +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+
Sbjct: 504 KLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERD 563
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+ L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL +
Sbjct: 564 KLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRA 623
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 624 LADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 683
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK
Sbjct: 684 EVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIK 743
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V +E+K FRPEF+NRID+++VF L ++I SIA IQL L +L K M L +S A
Sbjct: 744 EVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDA 803
Query: 670 ALKKISNIGFDLIYGAR 686
AL +I+ GFD ++GAR
Sbjct: 804 ALAEIARSGFDPVFGAR 820
>gi|114321705|ref|YP_743388.1| ATPase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228099|gb|ABI57898.1| ATPase AAA-2 domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 864
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/677 (62%), Positives = 554/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ E+ L+KYTIDLTE+A GKLDPVIGRD+EIRR IQVL RR+KNNPVL
Sbjct: 144 GGQSVDDPNAEDQRQSLEKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLSRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLA RIINGEVP L +K+IL LD+A L+AG KYRGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIAEGLANRIINGEVPEGLKTKRILSLDMAALIAGAKYRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDE+HT++G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR++IE
Sbjct: 264 DLAKQEGQIILFIDEIHTIVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKHIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+T++ILRGL+++YEVHHGVEITDPAIVAA++LS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVEDTVAILRGLKERYEVHHGVEITDPAIVAAAQLSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++IK+EIDSKPE MD+LERRLIQLKIE EA+ +E D++S+KRL +
Sbjct: 384 QLPDKAIDLVDEAASRIKMEIDSKPEEMDRLERRLIQLKIEREALAKEEDDASRKRLDAL 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EIN+LE +Y LE+IW EK ++ +Q IKE++E+ R +++ A R D +S+L+YG
Sbjct: 444 EGEINELEDEYKALEEIWNSEKAAVEGTQSIKEQLERARQELDTARRAGDLGRMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER Q D+ L + LL+T VG+EEIAE+VSR TGIPVSK+++ ER+K
Sbjct: 504 RIPELER------QLDLALQAEMHDTQLLRTSVGTEEIAEVVSRWTGIPVSKMLEGERDK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + KRVVGQDEA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 558 LLRMEEEIRKRVVGQDEAVAAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE++IR+DMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 618 ASFLFDTEEAMIRVDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEHVRRKPYSVILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA++DVFN+LLQ+LDDGRLTD+ GRT++FRNT+IVMTSNLGSD I++M + + ++
Sbjct: 678 VEKAHADVFNVLLQVLDDGRLTDSHGRTVDFRNTVIVMTSNLGSDVIQQMAGEEHYQEMR 737
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+D+++VF L R++I SI +IQL L +L + L++S A
Sbjct: 738 SAVMEIVGTHFRPEFINRVDEVVVFHPLGREHIRSITDIQLRQLNARLADKELTLEVSDA 797
Query: 670 ALKKISNIGFDLIYGAR 686
A ++ GFD +YGAR
Sbjct: 798 AKDQLGEAGFDPVYGAR 814
>gi|393757526|ref|ZP_10346350.1| ATP-dependent protease, ATPase subunit [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165218|gb|EJC65267.1| ATP-dependent protease, ATPase subunit [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 863
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/715 (62%), Positives = 575/715 (80%), Gaps = 13/715 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ + + + L+KYT DLTE+ARLGKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 145 GGSNVNDAEGDSNREALEKYTTDLTERARLGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L+LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNNEVPETLKGKRVLVLDLAALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + I+FIDELHTM+G GK EG++DAGNMLKP LSRGELHCIGATTLNEYRQYIE
Sbjct: 265 ELSKDDGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGV ITDPAIVAA+ELS RYI+DR
Sbjct: 325 KDAALERRFQKVLVNEPDMESTIAILRGLQERYELHHGVAITDPAIVAAAELSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAAA+I++EIDSKPE+MDKL+RR+IQLKIE EA+ ++ DE+S++RL I
Sbjct: 385 FLPDKAIDLIDEAAARIRMEIDSKPEVMDKLDRRIIQLKIEREAVIKDTDEASQRRLQAI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ KL+ +Y + E++WK EK ++ SQ +KEEIEKVR ++ + RK + +++L+YG
Sbjct: 445 NDEMEKLQREYNDYEEVWKAEKAAVQGSQVVKEEIEKVRAEMAELQRKGQFDKLAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE LK ++ ++ + +K LL+T+VG+EEIAE+VSR TGIPVSK++Q EREK
Sbjct: 505 KLPELEERLK-AAEANMDKADQ-DKPRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRVVGQ EA+ VS+AIRRSR+GLSD RPYGSF+FLGPTGVGKTEL K L
Sbjct: 563 LLQMEDYLHKRVVGQGEAVRLVSDAIRRSRAGLSDPSRPYGSFLFLGPTGVGKTELTKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 623 ANFLFDSEDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS I+ + ++IK
Sbjct: 683 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQRLSGEPYDVIKE 742
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
V EVK +FRPEF+NRID+++VF L ++I SIA IQL L +L + +M L++S AA
Sbjct: 743 VVWEEVKQHFRPEFLNRIDEVVVFHGLEAEHIESIARIQLERLDQRLAQRDMHLEVSDAA 802
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 725
L +++ GFD ++GAR + K+++ + H ++P A I G GP+ +
Sbjct: 803 LAQLAKAGFDPVFGARPL---KRAI-----QQHIENPVARLILEGRF---GPKDV 846
>gi|33592328|ref|NP_879972.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis Tohama
I]
gi|384203631|ref|YP_005589370.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis CS]
gi|54035814|sp|Q7VYV6.1|CLPB_BORPE RecName: Full=Chaperone protein ClpB
gi|33571973|emb|CAE41494.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis Tohama
I]
gi|332381745|gb|AEE66592.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis CS]
Length = 865
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/677 (63%), Positives = 558/677 (82%), Gaps = 1/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGESNREALSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + I+FIDELHTM G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELAQDDGQNIVFIDELHTMAGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +Y + E+IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG
Sbjct: 444 EEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L +LE LK + + +++ K LL+T+VG+EEIAE+VSR TGIPV+K++Q ER+
Sbjct: 504 KLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERD 563
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+ L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL +
Sbjct: 564 KLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRA 623
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 624 LADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 683
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK
Sbjct: 684 EVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIK 743
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V +E+K FRPEF+NRID+++VF L ++I SIA IQL L +L K M L +S A
Sbjct: 744 EVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDA 803
Query: 670 ALKKISNIGFDLIYGAR 686
AL +I+ GFD ++GAR
Sbjct: 804 ALAEIARSGFDPVFGAR 820
>gi|410473590|ref|YP_006896871.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis
Bpp5]
gi|408443700|emb|CCJ50378.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis
Bpp5]
Length = 865
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/677 (63%), Positives = 558/677 (82%), Gaps = 1/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGESNREALSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +Y + E+IWK EK ++ +Q IKEEI++VR ++ + RK + +++L+YG
Sbjct: 444 EEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+L +LE LK + + +++ K LL+T+VG EEIAE+VSR TGIPV+K++Q ER+
Sbjct: 504 KLPELEARLKAADSAEREAGESDSGKPRLLRTQVGVEEIAEVVSRATGIPVAKMMQGERD 563
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+ L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL +
Sbjct: 564 KLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRA 623
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 624 LADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 683
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ M E+IK
Sbjct: 684 EVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKPYEVIK 743
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V +E+K FRPEF+NRID+++VF L ++I SIA IQL L +L K M L +S A
Sbjct: 744 EVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDA 803
Query: 670 ALKKISNIGFDLIYGAR 686
AL +I+ GFD ++GAR
Sbjct: 804 ALAEIARSGFDPVFGAR 820
>gi|270159567|ref|ZP_06188223.1| chaperone protein ClpB [Legionella longbeachae D-4968]
gi|289165637|ref|YP_003455775.1| endopeptidase Clp ATP-binding subunit B [Legionella longbeachae
NSW150]
gi|269987906|gb|EEZ94161.1| chaperone protein ClpB [Legionella longbeachae D-4968]
gi|288858810|emb|CBJ12724.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
longbeachae NSW150]
Length = 859
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/739 (59%), Positives = 579/739 (78%), Gaps = 27/739 (3%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVTDPNAEEQRQALEKYTLDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++EIDSKPE MDKLERRLIQLKIE EA+K+E+DE+SKKRL +
Sbjct: 385 QLPDKAIDLIDEAGSLIRMEIDSKPESMDKLERRLIQLKIEREALKKEHDEASKKRLEDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ I++LE Y++LE++WK EK ++ + QIKE +E+ +L++ A R D +S+L+YG
Sbjct: 445 QHTIDELEHNYSDLEEVWKAEKATMQGATQIKEALEQAKLEMETARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + + + Q + L++ KV +E+AE+VSR TGIPV+K+++ E+EK
Sbjct: 505 RIPELEKRLAQVATTESQ------ETKLVRNKVTEDEVAEVVSRWTGIPVAKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L R++GQ+EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEVLHNRLIGQNEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK---EI 607
+EKA++DVFNILLQ++DDGRLTD +GRT++FRNTIIVMTSNLGS+ I+EM G+K E
Sbjct: 679 VEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTIIVMTSNLGSNLIQEM--GNKFKYEQ 736
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AVM V+ +FRPEFINRIDD +VF L ++ I IA IQ++ L+ +L + ++ L+++
Sbjct: 737 IKEAVMEMVRQHFRPEFINRIDDTVVFHALIKEQIAKIAAIQISYLQKRLKQQDIHLEVT 796
Query: 668 KAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
+ AL ++ GFD +YGAR + K+++ L ++P A I G +S DT
Sbjct: 797 QEALTHLAEAGFDPVYGARPL---KRTIQQQL-----ENPLAQAILTGRF-----KSGDT 843
Query: 728 LRMVYSMRNYAKIVLGNHE 746
+ + Y A++ HE
Sbjct: 844 IDVTY---QDAEMRFAGHE 859
>gi|293606291|ref|ZP_06688652.1| chaperone protein ClpB [Achromobacter piechaudii ATCC 43553]
gi|292815286|gb|EFF74406.1| chaperone protein ClpB [Achromobacter piechaudii ATCC 43553]
Length = 868
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/680 (63%), Positives = 555/680 (81%), Gaps = 4/680 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGESNREALSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+ + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELGQDDGSNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLGVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL+ +Y + E+IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG
Sbjct: 444 EDELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNA----NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
+L LE LK Q NA + LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 504 KLPDLESRLKAAEVGAQQAAENAEGDNGRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQG 563
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
EREKLL++E L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL
Sbjct: 564 EREKLLHMEEFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTEL 623
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
+ L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++
Sbjct: 624 TRALAEFMFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVV 683
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +
Sbjct: 684 LLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLAGQPYD 743
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
++K V E++ RPEF+NRID+++VF L ++I SIA IQL L +L K M L++
Sbjct: 744 VVKEVVWGELRQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLGARLEKQEMRLEV 803
Query: 667 SKAALKKISNIGFDLIYGAR 686
++AAL +++ GFD ++GAR
Sbjct: 804 TEAALAELARSGFDPVFGAR 823
>gi|407697521|ref|YP_006822309.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
dieselolei B5]
gi|407254859|gb|AFT71966.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
dieselolei B5]
Length = 861
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/677 (62%), Positives = 548/677 (80%), Gaps = 4/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ E+ + LKKYT DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVDDPNAEDRMESLKKYTTDLTARAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKEKRVLSLDMAALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVDITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDS PE MD+L+RRLIQLK+E EA+++E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSMPEEMDRLDRRLIQLKMEREALRKEEDEASRKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I LE +YA+LE+IW EK ++ +QQ K E+E+ R+ + +A R D +S+L+YG
Sbjct: 445 EADIAALEKEYADLEEIWNAEKAALQGAQQYKAELEQARVDMEQARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ +++ +++ + LL+ KV EE+AE+VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPELEKKVQQAQERE---EAAQVETQLLRNKVTDEEVAEVVSKWTGIPVSKMLEGEREK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 562 LLRMEEALHHRVVGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 AGFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFN+LLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I+ M +GD E +K
Sbjct: 682 VEKAHPDVFNVLLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRMAGEGDYEAMK 741
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+D+ +VF L + + IA IQL+ L+ +L+ M L +S A
Sbjct: 742 AAVMEVVGQHFRPEFINRVDETVVFHPLGQAQLKGIAGIQLDYLRKRLVDREMSLTLSDA 801
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ GFD +YGAR
Sbjct: 802 ALDKLVEAGFDPVYGAR 818
>gi|288941086|ref|YP_003443326.1| ATP-dependent chaperone ClpB [Allochromatium vinosum DSM 180]
gi|288896458|gb|ADC62294.1| ATP-dependent chaperone ClpB [Allochromatium vinosum DSM 180]
Length = 865
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/678 (62%), Positives = 556/678 (82%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQSVNDPNAEEQRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L SK++L LD+A L+AG+K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRLLALDMAALIAGSKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 265 DIARQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHH VEITD AIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHAVEITDTAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDS PE MD+L+RRLIQLKIE EA+K+E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSMPEEMDRLDRRLIQLKIEREALKKESDEASRKRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I +LE ++A+L++IWK EK ++ + IKE +++VRL++ A R DW +S+L+YG
Sbjct: 445 EGQIARLEREFADLDEIWKSEKAAVQGTAHIKEALDRVRLEMETARRAGDWTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ + N+ LL+ KV EE+AE+VS+ TGIP+SK+++ ER+K
Sbjct: 505 RVPELEKQLAAASQAE----QGENR--LLRNKVTDEEVAEVVSKWTGIPISKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ + +RVVGQ+EA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMESEIEQRVVGQNEAVRAVSDAIRRSRAGLSDPGRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSLILLDE
Sbjct: 619 AAFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN++IVMTSNLGSD I++ G+ +
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNSVIVMTSNLGSDIIQQ-RAGEAHYAEM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V+ FRPEFINR+D+I+VF L + I +IA IQL L+ +L + +M L++S
Sbjct: 738 KEAVMESVRHAFRPEFINRLDEIVVFHPLQQAQIRAIARIQLGYLQQRLAERDMKLEVSD 797
Query: 669 AALKKISNIGFDLIYGAR 686
AAL + GFD +YGAR
Sbjct: 798 AALDHLGAAGFDPVYGAR 815
>gi|421484387|ref|ZP_15931956.1| chaperone protein ClpB [Achromobacter piechaudii HLE]
gi|400197306|gb|EJO30273.1| chaperone protein ClpB [Achromobacter piechaudii HLE]
Length = 868
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/680 (63%), Positives = 556/680 (81%), Gaps = 4/680 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGESNREALSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP SL K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPESLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+ + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELGQDDGSNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLGVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL+ +Y + E+IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG
Sbjct: 444 EDELEKLQREYNDFEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNA----NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
+L LE LK Q NA ++ LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 504 KLPDLESRLKAAEVGAAQAAENAEGDESRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQG 563
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
EREKLL++E L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL
Sbjct: 564 EREKLLHMEEFLHKRVVGQDEAVRLVSDAIRRSRAGLADPARPYGSFLFLGPTGVGKTEL 623
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
+ L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 624 TRALAEFMFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 683
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +
Sbjct: 684 LLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLAGQPYD 743
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
++K V E+K RPEF+NRID+++VF L ++I SIA IQL L +L K M L++
Sbjct: 744 VVKEVVWGELKQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLGARLEKQEMRLEV 803
Query: 667 SKAALKKISNIGFDLIYGAR 686
+++AL +++ GFD ++GAR
Sbjct: 804 TESALAELARSGFDPVFGAR 823
>gi|254449004|ref|ZP_05062458.1| ATP-dependent chaperone ClpB [gamma proteobacterium HTCC5015]
gi|198261398|gb|EDY85689.1| ATP-dependent chaperone ClpB [gamma proteobacterium HTCC5015]
Length = 854
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/679 (61%), Positives = 555/679 (81%), Gaps = 11/679 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ EE+ L+KYTIDLTE+A GK+DPVIGRDDE+RRAIQVLQRR+KNNPVL
Sbjct: 143 GGQSVNDANAEENRQALEKYTIDLTERAEQGKIDPVIGRDDEVRRAIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRLLSLDLGALIAGAKYRGEFEERLKALLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 263 DLAKQEGQIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+T++ILRGL+++YEVHHGV++TDPAIV+A+ LS RYI+DR
Sbjct: 323 KDAALERRFQKVLVDEPSVEDTVAILRGLKERYEVHHGVDVTDPAIVSAATLSQRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKKRL +
Sbjct: 383 QLPDKAIDLIDEAASRIRMEIDSKPESMDKLERRLIQLKIEREALKKESDEASKKRLNDL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I LE +YA+L+++W+ EK+ ++ + +KE +++ R+++ A R D +S+L+YG
Sbjct: 443 ETQIRSLEKEYADLDEVWRSEKSAVQGNTNVKEALDRARVELETARRAGDLSRMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + D +FTLL+ KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 503 TIPELEQQLDQAESDD------EREFTLLRNKVTEEEIAEVVSKWTGIPVSKMLEGERDK 556
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEA+ AVS+A+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L
Sbjct: 557 LLRMEAALHQRVVGQDEAVRAVSDAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELTKAL 616
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 617 AAFLFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 676
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--- 607
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS +I+ + GD
Sbjct: 677 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSSEIQML--GDVSTYDD 734
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
+K AVM EV +FRPEFINRID+ +VF L++ I +IA +QL L+ ++ + ++ L+IS
Sbjct: 735 MKAAVMEEVGKHFRPEFINRIDEAVVFHSLDQTQIRAIAEVQLQSLRRRMQERDLSLEIS 794
Query: 668 KAALKKISNIGFDLIYGAR 686
+AAL K+ GFD +YGAR
Sbjct: 795 EAALDKLGEAGFDPVYGAR 813
>gi|345863973|ref|ZP_08816179.1| chaperone protein ClpB [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345124880|gb|EGW54754.1| chaperone protein ClpB [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 862
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/677 (62%), Positives = 550/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ E+ L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQSVDDPNAEDQRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKSKRLLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YEVHHGV+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYEVHHGVDITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDS PE MD+LERRLIQLKIE EA+ +E DE+SKKRL +
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSMPEEMDRLERRLIQLKIEREAMNKETDEASKKRLAHL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI +LE ++++LE+IWK EK ++ + IKE +E+ RL+++ A R D +S+L+YG
Sbjct: 445 ESEIERLEREFSDLEEIWKSEKAALQGTTHIKESLERARLEMDTARRAGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + LL+ KV EEIA +VS+ TGIPVSK+++ ER+K
Sbjct: 505 RIPELEKQLDMAAQAEMQ------QMKLLRNKVTDEEIAGVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + +RV+GQ E I AVS+AIRRSR+GL+D +P GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQEIGRRVIGQQEGIKAVSDAIRRSRAGLADPSQPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+IL+DE
Sbjct: 619 AEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILMDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I+E ++ ++K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSELIQEKSTEEQYGVMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V+ FRPEFINR+D+I+VF L R+ I +IA IQ++ L+ +L M L+IS A
Sbjct: 739 EAVMEVVRSAFRPEFINRLDEIVVFHPLAREQIRAIATIQIDYLRRRLADHEMGLQISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALDRLGEAGFDPVYGAR 815
>gi|344344157|ref|ZP_08775021.1| ATP-dependent chaperone ClpB [Marichromatium purpuratum 984]
gi|343804114|gb|EGV22016.1| ATP-dependent chaperone ClpB [Marichromatium purpuratum 984]
Length = 864
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/713 (60%), Positives = 562/713 (78%), Gaps = 11/713 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 143 GGQKVDDPNAEEQRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L S+++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKSRRLLSLDMAALIAGAKFRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 263 DIARQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKYVE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHAVEITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA+ I++EIDS PE MD+L+RRLIQLKIE EA+K+E DE+S+KRL +
Sbjct: 383 QLPDKAIDLVDEAASHIRMEIDSMPEEMDRLDRRLIQLKIEREALKKESDEASRKRLADL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ +LE ++A+L+++WK EK + + IKE +++ R+++ A R D +S+L+YG
Sbjct: 443 EDEVGRLEREFADLDEVWKSEKAAVAGTAHIKEALDRARVEMETARRAGDLGRMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + Q N LL+ KVG EEIAEIVSR TGIPVS++++ ER+K
Sbjct: 503 RIPELEKQLASAAAGTEQGDNR-----LLRNKVGDEEIAEIVSRWTGIPVSRMLEGERDK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + +RVVGQDEA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 558 LLRMEQEIGRRVVGQDEAVGAVSDAIRRSRAGLSDPARPIGSFLFLGPTGVGKTELCKTL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRR+PYSLILLDE
Sbjct: 618 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRRPYSLILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I++ G+ +
Sbjct: 678 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSEVIQQ-HAGEAAYAEM 736
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V+ FRPEFINR+D+I+VF L + I +IA IQL+ L+ +L M L++
Sbjct: 737 KTAVMAVVRQAFRPEFINRLDEIVVFHPLQQTQIRAIARIQLDYLQRRLADREMRLEVGD 796
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 721
AAL + GFD +YGAR + K+++ L+ + A GDLI G
Sbjct: 797 AALDLLGEAGFDPVYGARPL---KRAIRAQLENPLAQEILAGKFAPGDLIEVG 846
>gi|345870658|ref|ZP_08822609.1| ATP-dependent chaperone ClpB [Thiorhodococcus drewsii AZ1]
gi|343921471|gb|EGV32187.1| ATP-dependent chaperone ClpB [Thiorhodococcus drewsii AZ1]
Length = 865
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/712 (59%), Positives = 567/712 (79%), Gaps = 10/712 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEEQRQSLEKYTIDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 265 DVARQEGNVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+T++ILRGL+++YEVHH VEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPNVEDTVAILRGLKERYEVHHAVEITDPAIVAAAVLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDS PE MD+L+RRLIQLKIE EA+K+E DE+SKKRL +
Sbjct: 385 QLPDKAIDLIDEAASQIRMEIDSMPEEMDRLDRRLIQLKIEREAVKKETDEASKKRLTDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I +LE ++++L++IWK EK + + IKE +++VRL++ A R DW +S+L+YG
Sbjct: 445 QGQIERLEREFSDLDEIWKSEKAASQGNAHIKEALDRVRLEMETARRAGDWARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + D++ N LL++KV EEIA+IVS+ TGIPVS++++ EREK
Sbjct: 505 RIPELEKQL--ATSADVEKGEN----RLLRSKVTEEEIADIVSKWTGIPVSRMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + +RVVGQ+EA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEQAIEQRVVGQNEAVRAVSDAIRRSRAGLSDPARPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSLILLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-IK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN +IVMTSNLGSD I++M D +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSDVIQQMAGEDNYAEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V FRPEFINR+D+I+VF L R I +IA IQ++ L+ +L + +M L ++ A
Sbjct: 739 DAVMEVVSHAFRPEFINRLDEIVVFHPLQRAQIRAIARIQIDYLQKRLAERDMKLAVNDA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 721
AL + GFD +YGAR + K+++ L+ + + GDLI G
Sbjct: 799 ALDHLGEAGFDPVYGARPL---KRAIRAQLENPLAQEILSGKFAPGDLIEVG 847
>gi|333982395|ref|YP_004511605.1| ATP-dependent chaperone ClpB [Methylomonas methanica MC09]
gi|333806436|gb|AEF99105.1| ATP-dependent chaperone ClpB [Methylomonas methanica MC09]
Length = 857
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/677 (62%), Positives = 554/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ E+ LKKYTI+LTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDANAEDQRQALKKYTINLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP + K++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGIKGKQLLSLDMAALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 DLAKMEGQVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPNVEDTIAILRGLKERYEIHHSVDITDPAIVAAAMLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++E+DSKPE MDKL+RRLIQLKIE EA+K E D +SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASRIRMEMDSKPEAMDKLDRRLIQLKIEREAMKNESDAASKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I +LE +Y++L++IWK EK ++ + IKE +E RL++ A R D+ +S+L+YG
Sbjct: 445 QEDIAELEKEYSDLDEIWKAEKAALQGTATIKERLEHARLELEAARRSQDYTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
E+ KLE+ L SQ ++Q TLL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 EIPKLEKELDLASQAEMQ------DTTLLRSKVTEEEIAEVVSKWTGIPVSKMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEELGKRVIGQTEALKAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFMFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
IEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS I+E+ + +K
Sbjct: 679 IEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSSVIQELSGEENYNTMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINR+D+ +VF L + I +I IQ+ +L +L + +M+L++S++
Sbjct: 739 DAVMDIVGQHFRPEFINRVDEAVVFHPLGQGQIRAICKIQIELLLRRLQEKDMNLEVSES 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL + GFD +YGAR
Sbjct: 799 ALDLLGEAGFDPVYGAR 815
>gi|344941214|ref|ZP_08780502.1| ATP-dependent chaperone ClpB [Methylobacter tundripaludum SV96]
gi|344262406|gb|EGW22677.1| ATP-dependent chaperone ClpB [Methylobacter tundripaludum SV96]
Length = 858
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/710 (61%), Positives = 560/710 (78%), Gaps = 17/710 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE LKKYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQPVDDPNAEEQRQALKKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + K++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKGKRVLALDMAALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 265 DLAKQEGQVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL++KYEVHHGV+ITDPAI+AA+ LSYRYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKEKYEVHHGVDITDPAIIAAANLSYRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MDKL RRLIQLKIE A+K+E D +SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEEMDKLYRRLIQLKIEQVALKKEKDAASKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI LE +Y++LE+IWK EK ++ S IKE++E+ + ++ A+R D +S+L+YG
Sbjct: 445 EEEIADLEKEYSDLEEIWKAEKASLQGSASIKEKLEQAKTELEAASRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L +P A K TLL+ KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 IIPALEKQLHS------DVPAEAQKMTLLRNKVTEEEIAEVVSKWTGIPVSKMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEQLGKRVIGQEEALKAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRRKPYS+ILLDE
Sbjct: 619 AEFMFDTPDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNTIIVMTSNLGSD I+ + G+ ++
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTIIVMTSNLGSDVIQSL-SGEALYSVM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM+ V FRPEFINRID+ +VF L R I +I+ IQ++ L+ +L + +IS+
Sbjct: 738 KNAVMDIVSTKFRPEFINRIDEAVVFHSLGRGQIRAISGIQIDYLRKRLQDREIGFEISE 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
AL + GFD +YGAR + K+++ L ++P A I GD +
Sbjct: 798 EALDLLGEAGFDPVYGARPM---KRAIQQQL-----ENPLAQKILAGDFV 839
>gi|254517175|ref|ZP_05129233.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR5-3]
gi|219674680|gb|EED31048.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR5-3]
Length = 862
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/678 (62%), Positives = 552/678 (81%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ S EE L+KYTIDLTE+AR GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 143 GGASVDSADAEESRQALEKYTIDLTERARDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQR+INGEVP L K+IL LD+ LLAGTK+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRVINGEVPEGLRDKRILSLDLGALLAGTKFRGEFEERLKALLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQY+E
Sbjct: 263 ELSKEEGRVILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRQYVE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 323 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAAAQLSQRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE +D+LERRLIQLKIE EA++++ DES+ K+L L+
Sbjct: 383 QLPDKAIDLIDEAASRIRMEIDSKPEALDRLERRLIQLKIEREAVRKDEDESAVKQLALL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+I +E ++A+LE+IWK EK ++ + IK +IE+++L + A R D +S+L+YG
Sbjct: 443 DGQIESIEQEFADLEEIWKAEKASLQGAASIKSDIEQLKLDLETARRAGDLTRMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L + + N + TLL+ KV EE+AE+VSR+TGIP+SK+++ +R+K
Sbjct: 503 KLPELEKQLAQAHAAE-----NVER-TLLRNKVTDEEVAEVVSRSTGIPISKMLEGDRDK 556
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQ+EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 557 LLRMEDALHDRVVGQNEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 616
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE
Sbjct: 617 ANFLFDSEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDE 676
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E+ GD+ E +
Sbjct: 677 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEL-AGDENYEAM 735
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V +FRPEF+NRID+ +VF L ++ I IA IQL L+ +L +M L+IS
Sbjct: 736 KSAVMGVVSQHFRPEFVNRIDETVVFHPLLQEQIRGIATIQLAGLRARLAGRDMQLEISD 795
Query: 669 AALKKISNIGFDLIYGAR 686
A + ++ GFD +YGAR
Sbjct: 796 AFMDQLVEGGFDPVYGAR 813
>gi|422631434|ref|ZP_16696620.1| AAA ATPase, central region [Pseudomonas syringae pv. pisi str.
1704B]
gi|330941203|gb|EGH44077.1| AAA ATPase, central region [Pseudomonas syringae pv. pisi str.
1704B]
Length = 854
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/677 (63%), Positives = 548/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAATKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|386826620|ref|ZP_10113727.1| ATP-dependent chaperone ClpB [Beggiatoa alba B18LD]
gi|386427504|gb|EIJ41332.1| ATP-dependent chaperone ClpB [Beggiatoa alba B18LD]
Length = 863
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/677 (62%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ EE L+KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDPNAEEKRQALEKYTIDLTQRAIQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGKRVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHHGV+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHGVDITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MDKL+RRLIQLKIE EA+K+E D++SKKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPERMDKLDRRLIQLKIEREAMKKESDDASKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++I + E + A+L ++W EK ++ SQ IKEE+E+ +L + A R D +S+L+YG
Sbjct: 445 NEDIQRAERELADLNEVWNSEKAAVQGSQHIKEELEQAKLALETARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + + Q + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 RIPELEKRLSAAGKAETQ------EMQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQ EA+ VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEALHQRVVGQSEAVKLVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFLFDTEEAMIRIDMSEFMEKHTVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ +VFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+EM D +K
Sbjct: 679 VEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQVIQEMAGEDNYNAMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V FRPEFINRIDD++VF L + I SIA IQ+ +L+ +L M+++L IS A
Sbjct: 739 AAVMEIVSQQFRPEFINRIDDVVVFHPLGKAQIRSIAGIQIGLLRKRLGAMSIELSISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL + +GFD +YGAR
Sbjct: 799 ALDLLGEVGFDPVYGAR 815
>gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1]
gi|182682296|ref|YP_001830456.1| ATP-dependent chaperone ClpB [Xylella fastidiosa M23]
gi|386083626|ref|YP_005999908.1| ATP-dependent chaperone ClpB [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|54035830|sp|Q87AX8.1|CLPB_XYLFT RecName: Full=Chaperone protein ClpB
gi|28057675|gb|AAO29523.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1]
gi|182632406|gb|ACB93182.1| ATP-dependent chaperone ClpB [Xylella fastidiosa M23]
gi|307578573|gb|ADN62542.1| ATP-dependent chaperone ClpB [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 861
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/727 (58%), Positives = 573/727 (78%), Gaps = 16/727 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + ++ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQTENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKNEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL+ +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLVDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I L+ ++++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG
Sbjct: 445 ERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L LE+ L SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+K
Sbjct: 505 VLPALEKQLVAASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEADLGRRVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSLILLDE
Sbjct: 619 AEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII-- 608
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYT 738
Query: 609 --KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
K AVM V+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L +
Sbjct: 739 QMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESELKLDL 798
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + N+GFD +YGAR + K+++ L+ + A GD + G +D
Sbjct: 799 DDRALELLGNVGFDPVYGARPL---KRAIQSQLENALAQQILAGAFVSGDTVQVG---VD 852
Query: 727 TLRMVYS 733
++V+S
Sbjct: 853 GGKLVFS 859
>gi|417558810|ref|ZP_12209770.1| ATPase [Xylella fastidiosa EB92.1]
gi|338178645|gb|EGO81630.1| ATPase [Xylella fastidiosa EB92.1]
Length = 859
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/727 (58%), Positives = 573/727 (78%), Gaps = 16/727 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + ++ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 143 GGETVQTENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 263 DLAKNEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 323 KDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL+ +
Sbjct: 383 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLVDL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I L+ ++++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG
Sbjct: 443 ERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L LE+ L SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+K
Sbjct: 503 VLPALEKQLVAASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDK 556
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 557 LLRMEADLGRRVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKAL 616
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSLILLDE
Sbjct: 617 AEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDE 676
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII-- 608
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +
Sbjct: 677 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYT 736
Query: 609 --KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
K AVM V+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L +
Sbjct: 737 QMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESELKLDL 796
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + N+GFD +YGAR + K+++ L+ + A GD + G +D
Sbjct: 797 DDRALELLGNVGFDPVYGARPL---KRAIQSQLENALAQQILAGAFVSGDTVQVG---VD 850
Query: 727 TLRMVYS 733
++V+S
Sbjct: 851 GGKLVFS 857
>gi|378822292|ref|ZP_09845094.1| ATP-dependent chaperone protein ClpB [Sutterella parvirubra YIT
11816]
gi|378598886|gb|EHY31972.1| ATP-dependent chaperone protein ClpB [Sutterella parvirubra YIT
11816]
Length = 867
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/679 (62%), Positives = 553/679 (81%), Gaps = 2/679 (0%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
+V GK+ D E LKKYTIDLTE+AR GKLDPVIGRDDEIRR +Q+LQRRSKNN
Sbjct: 142 SVRGKDTADNPDAESQRETLKKYTIDLTERARQGKLDPVIGRDDEIRRTMQILQRRSKNN 201
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGEPGVGKTA+VEGLAQRI+N EVP++L KK+L LD+A L+AG KYRGEFE+RLKK
Sbjct: 202 PVLIGEPGVGKTAVVEGLAQRIVNDEVPDTLKGKKVLSLDMAGLIAGAKYRGEFEERLKK 261
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+L+E+ + II+FIDELHT++G GK EGS+DAGNMLKP L+RGELH IGATTL+EYR+
Sbjct: 262 LLEEVVAQEGRIILFIDELHTVVGAGKTEGSMDAGNMLKPALARGELHVIGATTLDEYRK 321
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
Y+EKDAA ERRFQK+L++EP +E+TI+ILRGLQ+KYE HHGVEITDPAIVAA+ELS RYI
Sbjct: 322 YVEKDAALERRFQKVLIDEPTVEDTIAILRGLQEKYEAHHGVEITDPAIVAAAELSNRYI 381
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DRF+PDKAIDLIDEAAA++K+EIDSKPE +DKL+RRLIQLKIE EA+++E D++SKKRL
Sbjct: 382 TDRFLPDKAIDLIDEAAARVKMEIDSKPEALDKLDRRLIQLKIEREAMRKETDDASKKRL 441
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
I++EI KL +YA+LE+IWK EK+ ++ +++EIE VR ++ + R++ ++ +++L
Sbjct: 442 EAIEEEIEKLSREYADLEEIWKKEKSEALGAKSVRDEIENVRREMEECRRQAKYERLAEL 501
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+Y L KLE L+ ++ Q + LL+T VG+EEIAE VSR TGIPV+K+++ E
Sbjct: 502 QYAVLPKLEEKLRHAEDEEKQEKKSGGP-KLLRTSVGAEEIAEAVSRATGIPVAKMMEGE 560
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R KLL++ L RVVGQDEA+ V+ I RSR+GLSD RPYGSF+FLGPTGVGKTEL
Sbjct: 561 RAKLLHMGEALESRVVGQDEAVKRVTETIMRSRAGLSDPNRPYGSFLFLGPTGVGKTELT 620
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL
Sbjct: 621 KALANFLFDSDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVIL 680
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
LDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLG+ +I++M E
Sbjct: 681 LDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGAAEIQDMIGESHER 740
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
+K AVM EV+ +FRPEF+NRID+I+VF L + +I IA +QL++L ++ ++ L++
Sbjct: 741 VKAAVMAEVREHFRPEFVNRIDEIVVFNPLGKDHIKRIAEMQLSLLAGRMAAQDIGLRVE 800
Query: 668 KAALKKISNIGFDLIYGAR 686
AAL +I+ GFD +GAR
Sbjct: 801 PAALDEIAEAGFDPHFGAR 819
>gi|104783632|ref|YP_610130.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
gi|95112619|emb|CAK17347.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
Length = 854
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/666 (63%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKALLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI++LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIDRLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
YA+LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWASEKAEVQGSAQIQQKIEQARQELEAARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E+LL +
Sbjct: 515 MVDQ------HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMESLLHE 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQDEA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-AGDREAQRAAVMDAVGSHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I I IQL L+ +L + + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRGRLAERELSLSLSPEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|152979666|ref|YP_001345295.1| ATPase [Actinobacillus succinogenes 130Z]
gi|150841389|gb|ABR75360.1| ATPase AAA-2 domain protein [Actinobacillus succinogenes 130Z]
Length = 856
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/731 (59%), Positives = 565/731 (77%), Gaps = 20/731 (2%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G K SL G+N+ Q E+ L+KYTIDLTE+A GKLDPVIGRDDEIRR
Sbjct: 130 GAKKESLEAAIKHVRGGQNVNDQNAEDSRQALEKYTIDLTERAESGKLDPVIGRDDEIRR 189
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
AIQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG
Sbjct: 190 AIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGA 249
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRGEFE+RLK +LKE++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELH
Sbjct: 250 KYRGEFEERLKAVLKELAQEEGSVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELH 309
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
C+GATTL+EYRQYIEKDAA ERRFQK+ V EP +E+TI+ILRGLQ++YE+HH VEITDPA
Sbjct: 310 CVGATTLDEYRQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLQERYELHHHVEITDPA 369
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ LS+RYISDR +PDKAIDLIDEAA+ I++EIDSKP +DKLERR+IQLK+E +A+
Sbjct: 370 IVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPLPLDKLERRIIQLKLEQQAL 429
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
K+E DE+S+KRL +++KE+ + E +YA LE++WK EK + +Q IK E+E R ++ +A
Sbjct: 430 KKEDDEASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQA 489
Query: 356 TRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRT 415
R D +S+L+YG + LE+ L + + + + LL+ +V EEIAE++SR
Sbjct: 490 RRAGDLNKMSELQYGTIPALEKQLADADKSE------GKEMKLLRYRVTDEEIAEVLSRA 543
Query: 416 TGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMF 475
TGIPVS++++ E+EKLL +E L KRVVGQ EA+ AV+NAIRRSR+GLSD RP GSF+F
Sbjct: 544 TGIPVSRMMEGEKEKLLRMEQELHKRVVGQSEAVEAVANAIRRSRAGLSDPNRPIGSFLF 603
Query: 476 LGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLT 535
LGPTGVGKTELCKTL+ +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLT
Sbjct: 604 LGPTGVGKTELCKTLANFMFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLT 663
Query: 536 EIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSD 595
E VRR+PYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD
Sbjct: 664 EAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD 723
Query: 596 KIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKN 655
I+E E +K VM+ V +FRPEFINRID+ +VF L ++NI +IA IQL L
Sbjct: 724 LIQENRSLGYEGMKEIVMSVVGQHFRPEFINRIDETVVFHPLAKENIKAIAQIQLARLAK 783
Query: 656 KLLKMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLG 715
++ + + S AAL IS +G+D IYGAR + K+++ + ++P AN I G
Sbjct: 784 RMAEHGYQISFSDAALDFISEVGYDPIYGARPL---KRAIQQEI-----ENPLANEILSG 835
Query: 716 DLINKGPQSLD 726
L+ P ++D
Sbjct: 836 KLLPSKPVTVD 846
>gi|388456237|ref|ZP_10138532.1| endopeptidase Clp ATP-binding subunit B [Fluoribacter dumoffii
Tex-KL]
Length = 858
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/679 (62%), Positives = 557/679 (82%), Gaps = 11/679 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L+KYT+DLT +A GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 145 GGETINDPNAEEQRQALEKYTLDLTARAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++EIDSKPE MDKLERRLIQLKIE EA+K+E+DE+SKKRL +
Sbjct: 385 QLPDKAIDLIDEAGSLIRMEIDSKPESMDKLERRLIQLKIEREALKKEHDEASKKRLEDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ I +LE Y++LE++WK EK ++ + QIKE +E+ +L++ A R D +S+L+YG
Sbjct: 445 EHTIEELEHNYSDLEEVWKAEKATMQGATQIKESLEQAKLEMETARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + + ++ ++ NK L++ KV +E+AE+VS+ TGIPV+K+++ E+EK
Sbjct: 505 RIPELEKRLAQVA----EVESHENK--LVRNKVTEDEVAEVVSKWTGIPVAKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L R++GQ+EAI AVSN+IRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEVLHNRLIGQNEAIDAVSNSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK---EI 607
+EKA++DVFNILLQ++DDGRLTD +GRT++FRNTIIVMTSNLGS+ I+EM G+K E
Sbjct: 679 VEKAHADVFNILLQVMDDGRLTDGQGRTVDFRNTIIVMTSNLGSNLIQEM--GNKFKYEQ 736
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AVM V+ +FRPEFINRIDD +VF L + I IA IQ++ L+ +L + ++ L+++
Sbjct: 737 IKDAVMEMVRQHFRPEFINRIDDTVVFHSLEKDQIAKIAAIQISYLQKRLKQQDIHLEVT 796
Query: 668 KAALKKISNIGFDLIYGAR 686
K AL +++ GFD +YGAR
Sbjct: 797 KEALTHLADAGFDPVYGAR 815
>gi|440745962|ref|ZP_20925249.1| ATPase AAA [Pseudomonas syringae BRIP39023]
gi|440371783|gb|ELQ08615.1| ATPase AAA [Pseudomonas syringae BRIP39023]
Length = 854
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/677 (63%), Positives = 548/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIQRLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGYIGYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYIGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|429462532|ref|YP_007183995.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811322|ref|YP_007447777.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338046|gb|AFZ82469.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776480|gb|AGF47479.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 860
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/668 (63%), Positives = 554/668 (82%), Gaps = 1/668 (0%)
Query: 19 QDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGK 78
+DE + L KYT D+T +A GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGEPGVGK
Sbjct: 152 EDESNRKSLSKYTTDITSRASNGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGK 211
Query: 79 TAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKD 138
TAIVEGLAQRI+NGEVP++L KK+L LDIA L+AG KYRGEFE+RLK +LKE+S + +
Sbjct: 212 TAIVEGLAQRIVNGEVPDNLKGKKVLSLDIASLIAGAKYRGEFEERLKSVLKELSIDGNN 271
Query: 139 IIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERR 198
I+FIDELHT++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERR
Sbjct: 272 SILFIDELHTIMGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERR 331
Query: 199 FQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAID 258
FQK+LVEEPD+E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS RYI+DRF+PDKAID
Sbjct: 332 FQKVLVEEPDVESTIAILRGLQERYEIHHGIEITDPAIVAAAELSNRYITDRFLPDKAID 391
Query: 259 LIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLE 318
LIDEA A+I++EIDSKPEIMD+L+R++IQLKIE EA+KRE D++S+KR +LI++E++KL+
Sbjct: 392 LIDEAGARIRMEIDSKPEIMDRLDRKIIQLKIEKEAVKREKDDASRKRFVLIEEELSKLQ 451
Query: 319 IKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERI 378
+Y + + IWK EK +++ +Q IKEEI+ ++++++ R + +++++Y L +LE
Sbjct: 452 KEYHDYDDIWKSEKAIVQGTQAIKEEIDNAKIRMSELQRTGQYDKLAEIQYSILPELESR 511
Query: 379 LKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLL 438
LK K I + +KF LL+T+VGSEEIAE+VSR+TGIPVSK++Q E++KLLN+ N L
Sbjct: 512 LKFAEGK-INNDSKQHKFKLLRTQVGSEEIAEVVSRSTGIPVSKMMQGEKDKLLNLSNFL 570
Query: 439 CKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNE 498
RV+GQ+EA+ AVS+AI RSR+GLSD+ RPYGSF+FLG TGVGKTEL + L+ +F+
Sbjct: 571 SSRVIGQEEAVQAVSDAIIRSRAGLSDSSRPYGSFLFLGSTGVGKTELARALTEFLFDAT 630
Query: 499 ESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDV 558
+ ++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DV
Sbjct: 631 DHMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDV 690
Query: 559 FNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKI 618
FNILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGS +I ME + IK V+ ++
Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSSEINSMEDKPYDKIKEIVLGTIRQ 750
Query: 619 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 678
RPEF+NRID+I+VF L ++++ SI IQL+ L +++ + +M + ++ AA+ +SNIG
Sbjct: 751 VLRPEFLNRIDEIVVFHNLEQRHMESIVRIQLDRLNHRIQQKDMSIDVTNAAISALSNIG 810
Query: 679 FDLIYGAR 686
FD +GAR
Sbjct: 811 FDSNFGAR 818
>gi|422621047|ref|ZP_16689715.1| AAA ATPase, central region [Pseudomonas syringae pv. japonica str.
M301072]
gi|443641450|ref|ZP_21125300.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
syringae pv. syringae B64]
gi|330901395|gb|EGH32814.1| AAA ATPase, central region [Pseudomonas syringae pv. japonica str.
M301072]
gi|443281467|gb|ELS40472.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
syringae pv. syringae B64]
Length = 854
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/677 (63%), Positives = 548/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|388469396|ref|ZP_10143605.1| ATP-dependent chaperone protein ClpB [Pseudomonas synxantha BG33R]
gi|388006093|gb|EIK67359.1| ATP-dependent chaperone protein ClpB [Pseudomonas synxantha BG33R]
Length = 854
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/676 (62%), Positives = 552/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLSRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + +DL++S A
Sbjct: 738 AVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELDLELSGEA 797
Query: 671 LKKISNIGFDLIYGAR 686
L K+ +G+D +YGAR
Sbjct: 798 LDKLIAVGYDPVYGAR 813
>gi|387892000|ref|YP_006322297.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens A506]
gi|387162601|gb|AFJ57800.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens A506]
Length = 854
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/676 (62%), Positives = 552/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + +DL++S A
Sbjct: 738 AVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELDLELSSEA 797
Query: 671 LKKISNIGFDLIYGAR 686
L K+ +G+D +YGAR
Sbjct: 798 LDKLIAVGYDPVYGAR 813
>gi|402698425|ref|ZP_10846404.1| ATP-dependent chaperone protein ClpB [Pseudomonas fragi A22]
Length = 855
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/677 (62%), Positives = 554/677 (81%), Gaps = 11/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTIDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LDI L+AG K+RGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDIGALIAGAKFRGEFEERLKALL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELH M+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHVMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++KKRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEEDEAAKKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A R + +++L+Y
Sbjct: 444 LQEEIERLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQARQELEVARRSGNLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ + + N LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 GVIPDLERSLQMVDEHSSKTENQ-----LLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 558
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 559 KLMKMESLLHERVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 618
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 619 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 678
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 EVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 737
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I IA IQL+ L+++L + ++ L++ K
Sbjct: 738 AAVMDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGIAEIQLSRLRSRLAERDLSLELDKD 797
Query: 670 ALKKISNIGFDLIYGAR 686
AL+K+ +G+D +YGAR
Sbjct: 798 ALEKLIAVGYDPVYGAR 814
>gi|302185257|ref|ZP_07261930.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Pseudomonas syringae pv. syringae 642]
Length = 854
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/677 (63%), Positives = 548/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|424070606|ref|ZP_17808040.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|440724230|ref|ZP_20904560.1| ATPase AAA [Pseudomonas syringae BRIP34876]
gi|440728950|ref|ZP_20909149.1| ATPase AAA [Pseudomonas syringae BRIP34881]
gi|408000304|gb|EKG40665.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|440358167|gb|ELP95557.1| ATPase AAA [Pseudomonas syringae BRIP34876]
gi|440360351|gb|ELP97629.1| ATPase AAA [Pseudomonas syringae BRIP34881]
Length = 854
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/677 (63%), Positives = 548/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|359796795|ref|ZP_09299388.1| chaperone protein ClpB [Achromobacter arsenitoxydans SY8]
gi|359365241|gb|EHK66945.1| chaperone protein ClpB [Achromobacter arsenitoxydans SY8]
Length = 868
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/680 (62%), Positives = 557/680 (81%), Gaps = 4/680 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGEANREALSKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+ + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELGQDDGRNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLAVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KL+ +Y + E+IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG
Sbjct: 444 EEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILK----EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
+L LE LK ++ + ++ LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 504 KLPDLEARLKAAEVGAAEAAENAEGDESRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQG 563
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
EREKLLN+E L +RVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL
Sbjct: 564 EREKLLNMEEFLHRRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTEL 623
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
+ L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++
Sbjct: 624 TRALAEFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVV 683
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +
Sbjct: 684 LLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLAGQPYD 743
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
++K V +E+K RPEF+NRID+++VF L ++I SIA IQL L +L + M L++
Sbjct: 744 VVKEVVWDELKQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLGERLERQEMRLEV 803
Query: 667 SKAALKKISNIGFDLIYGAR 686
++ AL +++ GFD ++GAR
Sbjct: 804 TEPALAELARSGFDPVFGAR 823
>gi|71730024|gb|EAO32116.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Ann-1]
Length = 861
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/727 (58%), Positives = 573/727 (78%), Gaps = 16/727 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + ++ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQTENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKNEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL+ +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLVDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I L+ ++++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG
Sbjct: 445 ERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L LE+ L SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+K
Sbjct: 505 VLPALEKQLVAASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEADLGRRVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+ RR+PYSLILLDE
Sbjct: 619 AEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELARRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII-- 608
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYT 738
Query: 609 --KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
K AVM V+++FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L +
Sbjct: 739 QMKAAVMGVVQVHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESELKLDL 798
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + N+GFD +YGAR + K+++ L+ + A GD + G +D
Sbjct: 799 DDRALELLGNVGFDPVYGARPL---KRAIQSQLENPLAQQILAGAFVSGDTVQVG---VD 852
Query: 727 TLRMVYS 733
++V+S
Sbjct: 853 GGKLVFS 859
>gi|423689870|ref|ZP_17664390.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
SS101]
gi|388002306|gb|EIK63635.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
SS101]
Length = 854
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/676 (62%), Positives = 552/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + +DL++S A
Sbjct: 738 AVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELDLELSGEA 797
Query: 671 LKKISNIGFDLIYGAR 686
L K+ +G+D +YGAR
Sbjct: 798 LDKLIAVGYDPVYGAR 813
>gi|440739028|ref|ZP_20918550.1| chaperone [Pseudomonas fluorescens BRIP34879]
gi|440380400|gb|ELQ16967.1| chaperone [Pseudomonas fluorescens BRIP34879]
Length = 854
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/666 (63%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEIQRLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINR+D++++F L R I I IQL L+ +L + + L++S+ AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLQLSREALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|422666963|ref|ZP_16726829.1| AAA ATPase, central region [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330977495|gb|EGH77441.1| AAA ATPase, central region [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 854
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/677 (63%), Positives = 547/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSPRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGPLRKRLAERELSMTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|107099795|ref|ZP_01363713.1| hypothetical protein PaerPA_01000813 [Pseudomonas aeruginosa PACS2]
Length = 849
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/686 (61%), Positives = 558/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVL
Sbjct: 130 ALENAVANLRGGEAVNDPNVEESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVL 189
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 190 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGE 249
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 250 FEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 309
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 310 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAA 369
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 370 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 429
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+++KRL ++++I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 430 EATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGD 489
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++++++Y + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 490 LESMARIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPV 543
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E L +RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 544 SKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTG 603
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RR
Sbjct: 604 VGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRR 663
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+
Sbjct: 664 KPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL 723
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD+E + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L +
Sbjct: 724 -AGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAER 782
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L++S+ AL K+ +GFD +YGAR
Sbjct: 783 ELSLELSQEALDKLIAVGFDPVYGAR 808
>gi|422318953|ref|ZP_16400043.1| chaperone ClpB [Achromobacter xylosoxidans C54]
gi|317406406|gb|EFV86623.1| chaperone ClpB [Achromobacter xylosoxidans C54]
Length = 868
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/680 (63%), Positives = 555/680 (81%), Gaps = 4/680 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGESNREALAKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELSQDDGSNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLGVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL+ +Y + E+IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG
Sbjct: 444 EDELEKLQREYNDFEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILK----EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
+L LE LK ++ + + LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 504 KLPDLEARLKAAEVGAAEAAEEAEGGEGRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQG 563
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
EREKLL++E L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL
Sbjct: 564 EREKLLHMEEYLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTEL 623
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
+ L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++
Sbjct: 624 TRALAEFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVV 683
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +
Sbjct: 684 LLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQTLAGQPYD 743
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
++K V E+K RPEF+NRID+++VF L ++I SIA IQL L +L K M L++
Sbjct: 744 VVKEVVWGELKQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLAERLEKQEMRLEV 803
Query: 667 SKAALKKISNIGFDLIYGAR 686
++ AL +++ GFD ++GAR
Sbjct: 804 TEPALAELARDGFDPVFGAR 823
>gi|15599738|ref|NP_253232.1| ClpB protein [Pseudomonas aeruginosa PAO1]
gi|116052687|ref|YP_793003.1| clpB protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|254238710|ref|ZP_04932033.1| ClpB protein [Pseudomonas aeruginosa C3719]
gi|296391363|ref|ZP_06880838.1| clpB protein [Pseudomonas aeruginosa PAb1]
gi|313107187|ref|ZP_07793386.1| clpB protein [Pseudomonas aeruginosa 39016]
gi|355652375|ref|ZP_09056771.1| chaperone ClpB [Pseudomonas sp. 2_1_26]
gi|386060694|ref|YP_005977216.1| ClpB protein [Pseudomonas aeruginosa M18]
gi|386064010|ref|YP_005979314.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa NCGM2.S1]
gi|392986205|ref|YP_006484792.1| clpB protein [Pseudomonas aeruginosa DK2]
gi|416858844|ref|ZP_11913559.1| clpB protein [Pseudomonas aeruginosa 138244]
gi|416877399|ref|ZP_11919799.1| clpB protein [Pseudomonas aeruginosa 152504]
gi|418584141|ref|ZP_13148206.1| clpB protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418590194|ref|ZP_13154107.1| clpB protein [Pseudomonas aeruginosa MPAO1/P2]
gi|419752087|ref|ZP_14278496.1| clpB protein [Pseudomonas aeruginosa PADK2_CF510]
gi|421155962|ref|ZP_15615421.1| ClpB protein [Pseudomonas aeruginosa ATCC 14886]
gi|421170310|ref|ZP_15628272.1| ClpB protein [Pseudomonas aeruginosa ATCC 700888]
gi|421176800|ref|ZP_15634459.1| ClpB protein [Pseudomonas aeruginosa CI27]
gi|421519096|ref|ZP_15965768.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa PAO579]
gi|424944692|ref|ZP_18360455.1| ClpB protein [Pseudomonas aeruginosa NCMG1179]
gi|451983095|ref|ZP_21931390.1| ClpB protein [Pseudomonas aeruginosa 18A]
gi|54035903|sp|Q9HVN5.1|CLPB_PSEAE RecName: Full=Chaperone protein ClpB
gi|9950786|gb|AAG07930.1|AE004868_1 ClpB protein [Pseudomonas aeruginosa PAO1]
gi|32423740|gb|AAP81264.1| ClpB [Pseudomonas aeruginosa PA14]
gi|115587908|gb|ABJ13923.1| clpB protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170641|gb|EAZ56152.1| ClpB protein [Pseudomonas aeruginosa C3719]
gi|310879888|gb|EFQ38482.1| clpB protein [Pseudomonas aeruginosa 39016]
gi|334838994|gb|EGM17693.1| clpB protein [Pseudomonas aeruginosa 138244]
gi|334839646|gb|EGM18324.1| clpB protein [Pseudomonas aeruginosa 152504]
gi|346061138|dbj|GAA21021.1| ClpB protein [Pseudomonas aeruginosa NCMG1179]
gi|347307000|gb|AEO77114.1| ClpB protein [Pseudomonas aeruginosa M18]
gi|348032569|dbj|BAK87929.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa NCGM2.S1]
gi|354824206|gb|EHF08460.1| chaperone ClpB [Pseudomonas sp. 2_1_26]
gi|375046270|gb|EHS38835.1| clpB protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050967|gb|EHS43442.1| clpB protein [Pseudomonas aeruginosa MPAO1/P2]
gi|384401664|gb|EIE48018.1| clpB protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392321710|gb|AFM67090.1| clpB protein [Pseudomonas aeruginosa DK2]
gi|404346081|gb|EJZ72432.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa PAO579]
gi|404519555|gb|EKA30289.1| ClpB protein [Pseudomonas aeruginosa ATCC 14886]
gi|404523842|gb|EKA34234.1| ClpB protein [Pseudomonas aeruginosa ATCC 700888]
gi|404530437|gb|EKA40437.1| ClpB protein [Pseudomonas aeruginosa CI27]
gi|451759229|emb|CCQ83913.1| ClpB protein [Pseudomonas aeruginosa 18A]
gi|453046121|gb|EME93838.1| clpB protein [Pseudomonas aeruginosa PA21_ST175]
Length = 854
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/686 (61%), Positives = 558/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAVANLRGGEAVNDPNVEESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+++KRL ++++I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 435 EATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++++++Y + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LESMARIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E L +RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RR
Sbjct: 609 VGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+
Sbjct: 669 KPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD+E + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L +
Sbjct: 729 -AGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L++S+ AL K+ +GFD +YGAR
Sbjct: 788 ELSLELSQEALDKLIAVGFDPVYGAR 813
>gi|410092213|ref|ZP_11288746.1| clpB protein [Pseudomonas viridiflava UASWS0038]
gi|409760455|gb|EKN45601.1| clpB protein [Pseudomonas viridiflava UASWS0038]
Length = 854
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/677 (63%), Positives = 549/677 (81%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLDK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ +I +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQDDIQRLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLKMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID++++F L R I I +IQL+ L+ +L + + L +S
Sbjct: 737 AAVMDAVSTHFRPEFINRIDEVVIFEPLARDQIAGITDIQLDRLRKRLTERELSLTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|424065893|ref|ZP_17803366.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408002911|gb|EKG43137.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 854
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/677 (63%), Positives = 548/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEVQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|423018803|ref|ZP_17009524.1| chaperone protein ClpB 1 [Achromobacter xylosoxidans AXX-A]
gi|338778101|gb|EGP42583.1| chaperone protein ClpB 1 [Achromobacter xylosoxidans AXX-A]
Length = 868
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/680 (63%), Positives = 555/680 (81%), Gaps = 4/680 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGESNREALSKYTMDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELSQDDGSNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLGVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL+ +Y + E+IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG
Sbjct: 444 EDELEKLQREYNDFEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILK----EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
+L LE LK ++ + + LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 504 KLPDLEARLKAAEVGAAEAAEEAEGGEGRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQG 563
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
EREKLL++E L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL
Sbjct: 564 EREKLLHMEEYLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTEL 623
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
+ L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++
Sbjct: 624 TRALAEFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVV 683
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +
Sbjct: 684 LLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQTLAGQPYD 743
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
++K V E+K RPEF+NRID+++VF L ++I SIA IQL L +L K M L++
Sbjct: 744 VVKEVVWGELKQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLAERLEKQEMRLEV 803
Query: 667 SKAALKKISNIGFDLIYGAR 686
++ AL +++ GFD ++GAR
Sbjct: 804 TEPALAELARDGFDPVFGAR 823
>gi|66043993|ref|YP_233834.1| ATPase AAA [Pseudomonas syringae pv. syringae B728a]
gi|63254700|gb|AAY35796.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Pseudomonas syringae pv. syringae B728a]
Length = 854
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/677 (63%), Positives = 548/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|170723706|ref|YP_001751394.1| ATP-dependent chaperone ClpB [Pseudomonas putida W619]
gi|169761709|gb|ACA75025.1| ATP-dependent chaperone ClpB [Pseudomonas putida W619]
Length = 854
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E+LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEDLLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA++AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVTAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-AGDREAQRAAVMDAVGAHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEF+NRID+++VF L R+ I I IQL L+++L + + L +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVVFEPLGREQIAGITEIQLGRLRSRLSERELALSLSPEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|218893637|ref|YP_002442506.1| ClpB protein [Pseudomonas aeruginosa LESB58]
gi|421182603|ref|ZP_15640077.1| ClpB protein [Pseudomonas aeruginosa E2]
gi|218773865|emb|CAW29679.1| ClpB protein [Pseudomonas aeruginosa LESB58]
gi|404541751|gb|EKA51100.1| ClpB protein [Pseudomonas aeruginosa E2]
Length = 854
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/686 (61%), Positives = 558/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAVANLRGGEAVNDPNVEESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+++KRL ++++I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 435 EATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++++++Y + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LESMARIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E L +RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RR
Sbjct: 609 VGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+
Sbjct: 669 KPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD+E + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L +
Sbjct: 729 -AGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L++S+ AL K+ +GFD +YGAR
Sbjct: 788 ELSLELSQEALDKLIAVGFDPVYGAR 813
>gi|420138348|ref|ZP_14646277.1| ClpB protein [Pseudomonas aeruginosa CIG1]
gi|421162907|ref|ZP_15621700.1| ClpB protein [Pseudomonas aeruginosa ATCC 25324]
gi|403248928|gb|EJY62455.1| ClpB protein [Pseudomonas aeruginosa CIG1]
gi|404532674|gb|EKA42547.1| ClpB protein [Pseudomonas aeruginosa ATCC 25324]
Length = 854
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/686 (61%), Positives = 557/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAVANLRGGEAVNDPNVEESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+++KRL ++++I KLE +YA+LE IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 435 EATRKRLAKLEEDIVKLEREYADLEDIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++++++Y + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LESMARIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E L +RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RR
Sbjct: 609 VGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+
Sbjct: 669 KPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD+E + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L +
Sbjct: 729 -AGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L++S+ AL K+ +GFD +YGAR
Sbjct: 788 ELSLELSQEALDKLIAVGFDPVYGAR 813
>gi|330811801|ref|YP_004356263.1| chaperone [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
gi|378952908|ref|YP_005210396.1| chaperone ClpB [Pseudomonas fluorescens F113]
gi|423699369|ref|ZP_17673859.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q8r1-96]
gi|327379909|gb|AEA71259.1| Chaperone [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
gi|359762922|gb|AEV65001.1| ClpB [Pseudomonas fluorescens F113]
gi|387997271|gb|EIK58601.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q8r1-96]
Length = 854
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/676 (62%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAKKRLERL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSTQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLQLSDEA 797
Query: 671 LKKISNIGFDLIYGAR 686
L K+ +G+D +YGAR
Sbjct: 798 LDKLIAVGYDPVYGAR 813
>gi|311107398|ref|YP_003980251.1| chaperone protein ClpB [Achromobacter xylosoxidans A8]
gi|310762087|gb|ADP17536.1| chaperone protein ClpB 1 [Achromobacter xylosoxidans A8]
Length = 868
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/680 (63%), Positives = 555/680 (81%), Gaps = 4/680 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGENVSGAEGESNREALSKYTMDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELSLDDGSNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I
Sbjct: 384 FLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLGVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ KL+ +Y + E+IWK EK ++ +Q IKEEI+ VR ++ + RK + +++L+YG
Sbjct: 444 EDELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILK----EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 426
+L LE LK ++ + LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 504 KLPDLEARLKAAEVGAAEAAEDAEGGEGRPRLLRTRVGAEEIAEVVSRATGIPVSKMMQG 563
Query: 427 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 486
EREKLL++E L KRVVGQDEA+ VS+AIRRSR+GL+D RPYGSF+FLGPTGVGKTEL
Sbjct: 564 EREKLLHMEEYLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTEL 623
Query: 487 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 546
+ L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 624 TRALAEFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 683
Query: 547 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 606
LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ + +
Sbjct: 684 LLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLAGKPYD 743
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
++K V +E+K RPEF+NRID+++VF L ++I SIA IQL L +L K M L++
Sbjct: 744 VVKEVVWDELKQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLGERLEKQEMRLEV 803
Query: 667 SKAALKKISNIGFDLIYGAR 686
S+ AL +++ GFD ++GAR
Sbjct: 804 SEPALAELARSGFDPVFGAR 823
>gi|71736209|ref|YP_273034.1| clpB protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257481615|ref|ZP_05635656.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|289627152|ref|ZP_06460106.1| clpB protein [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|416014082|ref|ZP_11562002.1| clpB protein [Pseudomonas syringae pv. glycinea str. B076]
gi|416024302|ref|ZP_11568434.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|422584377|ref|ZP_16659487.1| clpB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422598531|ref|ZP_16672791.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422679424|ref|ZP_16737698.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|71556762|gb|AAZ35973.1| clpB protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320326251|gb|EFW82305.1| clpB protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320330675|gb|EFW86652.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330869194|gb|EGH03903.1| clpB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330988808|gb|EGH86911.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331008772|gb|EGH88828.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 854
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/677 (63%), Positives = 548/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+++E+ +LE +YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQEEVVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + L +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|423097380|ref|ZP_17085176.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q2-87]
gi|397885254|gb|EJL01737.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q2-87]
Length = 854
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/676 (62%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAKKRLERL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEILRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSTQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLQLSDEA 797
Query: 671 LKKISNIGFDLIYGAR 686
L K+ +G+D +YGAR
Sbjct: 798 LDKLIAVGYDPVYGAR 813
>gi|409417475|ref|ZP_11257524.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
sp. HYS]
Length = 854
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/676 (62%), Positives = 549/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNAEESRQALDKYTIDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI +LE +YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 TEEIARLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLSRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPDLERSLQMVDQ------HGKAENQLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMESLLHERVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSSQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ V +FRPEFINRID+++VF L R+ I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGITQIQLGRLRSRLTERELSLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
L K+ +G+D +YGAR
Sbjct: 798 LDKLIAVGYDPVYGAR 813
>gi|152985423|ref|YP_001350513.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa PA7]
gi|150960581|gb|ABR82606.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa PA7]
Length = 854
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/686 (61%), Positives = 556/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+D+T +A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAVANLRGGEAVNDPNVEESRQALDKYTVDMTRRAEEGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+++KRL ++++I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 435 EATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++++++Y + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LESMARIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E L +RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RR
Sbjct: 609 VGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+
Sbjct: 669 KPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD+E + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L +
Sbjct: 729 -AGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L +S+ AL K+ +GFD +YGAR
Sbjct: 788 ELSLDLSQEALDKLIAVGFDPVYGAR 813
>gi|452876832|ref|ZP_21954166.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa VRFPA01]
gi|452186377|gb|EME13395.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa VRFPA01]
Length = 774
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/686 (61%), Positives = 556/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+D+T +A GKLDPVIGRDDEIRR IQVL
Sbjct: 55 ALENAVANLRGGEAVNDPNVEESRQALDKYTVDMTRRAEEGKLDPVIGRDDEIRRTIQVL 114
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 115 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGE 174
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 175 FEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 234
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 235 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAA 294
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 295 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 354
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+++KRL ++++I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 355 EATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGD 414
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++++++Y + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 415 LESMARIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPV 468
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E L +RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 469 SKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTG 528
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RR
Sbjct: 529 VGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRR 588
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+
Sbjct: 589 KPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL 648
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD+E + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L +
Sbjct: 649 -AGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAER 707
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L +S+ AL K+ +GFD +YGAR
Sbjct: 708 ELSLDLSQEALGKLIAVGFDPVYGAR 733
>gi|398848122|ref|ZP_10604958.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM84]
gi|398249906|gb|EJN35274.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM84]
Length = 854
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E+LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEDLLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ+EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQNEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGSHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEF+NRID+++VF L R I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFVNRIDEVVVFEPLGRDQIAGITEIQLGRLRSRLLERELALSLSPEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|422674213|ref|ZP_16733568.1| AAA ATPase, central region [Pseudomonas syringae pv. aceris str.
M302273]
gi|330971942|gb|EGH72008.1| AAA ATPase, central region [Pseudomonas syringae pv. aceris str.
M302273]
Length = 854
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/677 (62%), Positives = 548/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + ++
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMTLTPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|447915151|ref|YP_007395719.1| chaperone [Pseudomonas poae RE*1-1-14]
gi|445199014|gb|AGE24223.1| chaperone [Pseudomonas poae RE*1-1-14]
Length = 854
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEIQRLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+ L +
Sbjct: 515 MVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESQLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINR+D++++F L R I I IQL L+ +L + + L++S+ AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLQLSREALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|92112632|ref|YP_572560.1| ATPase AAA-2 [Chromohalobacter salexigens DSM 3043]
gi|91795722|gb|ABE57861.1| ATPase AAA-2 [Chromohalobacter salexigens DSM 3043]
Length = 860
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/678 (61%), Positives = 550/678 (81%), Gaps = 6/678 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + EE L KYT DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGSKVDDASAEESREALDKYTTDLTQRAGEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLALDMGSLLAGAKYRGEFEERLKAVLG 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 265 ELAKEEGRVILFVDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQHIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP+ E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPNEEDTVAILRGLKERYEVHHGVDITDGAIIAAAKLSTRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++E+DS PE MD+L+RRLIQLK+E EA+K+E DE++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMELDSMPEEMDRLDRRLIQLKMEREALKKETDEATKKRLDSL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I LE +YA+LE++WK EK I+ + Q K E+E+ R+ + A R+ D +S+L+YG
Sbjct: 445 EAQIESLEREYADLEEVWKAEKASIQGAAQFKAELEQARIDLEAARRQGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ KLE+ + E S+++ + K LL++ V EEIAE+VSR TGIPVSK+++ ER+K
Sbjct: 505 VIPKLEKQIAEASEQE----TDTAKHQLLRSNVTEEEIAEVVSRWTGIPVSKMLEGERDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA++AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 561 LLRMEEALHERVIGQDEAVTAVANAVRRSRAGLADPGRPNGSFLFLGPTGVGKTELCKSL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 621 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA++DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+ M + D +
Sbjct: 681 VEKAHADVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQRMGGDDADYGAM 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
+ AVM V +FRPE INRID+++VF L ++ I SIA IQL LK +L + + L++S
Sbjct: 741 RDAVMGVVGDHFRPELINRIDEVVVFHALGQEQIQSIAGIQLERLKARLAEREIRLEVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AL +++ +GFD ++GAR
Sbjct: 801 DALAQLAVVGFDPVFGAR 818
>gi|395650246|ref|ZP_10438096.1| chaperone [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 854
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 549/666 (82%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLQEEIVRLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWSAEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
+Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KL+ +E+LL +
Sbjct: 515 MVAQ------HGHSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKMESLLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSMQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINR+D++++F L R I I IQL L+ +L + + L++S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRARLAERELSLELSTEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|298160065|gb|EFI01097.1| ClpB protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 854
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/677 (63%), Positives = 547/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DL ++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLAKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+++E+ +LE +YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQEEVVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + L +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|452124651|ref|ZP_21937235.1| ATP-dependent protease ATPase subunit [Bordetella holmesii F627]
gi|452128044|ref|ZP_21940623.1| ATP-dependent protease ATPase subunit [Bordetella holmesii H558]
gi|451923881|gb|EMD74022.1| ATP-dependent protease ATPase subunit [Bordetella holmesii F627]
gi|451926259|gb|EMD76395.1| ATP-dependent protease ATPase subunit [Bordetella holmesii H558]
Length = 867
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/679 (63%), Positives = 563/679 (82%), Gaps = 3/679 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I + E + L KYT+DLTE+AR GKLDPVIGRDDEIRR IQ+LQRR+KNNPVL
Sbjct: 144 GGEKISEAEGESNREALSKYTMDLTERAREGKLDPVIGRDDEIRRTIQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGL QRI+N EVP +L K++L LD+A LLAG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLTQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 264 ELSQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
F+PDKAIDLIDEAA++I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+RL +I
Sbjct: 384 FLPDKAIDLIDEAASRIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKRRLAVI 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ +L+ +Y + E+IWK EK ++ +Q IKEEI++VR + + RK + +++L+YG
Sbjct: 444 EEELERLQREYNDYEEIWKAEKAAVQCTQSIKEEIDRVRADMAELQRKGQFDKLAELQYG 503
Query: 371 ELNKLERILK--EKSQKDIQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+L +LE LK + +++D++ A K LL+T+VG+EEIAE+VSR TGIPVSK+++ E
Sbjct: 504 KLPELEARLKAADMAEEDVERAEVAGGKPRLLRTQVGAEEIAEVVSRATGIPVSKMMEGE 563
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL++E+ L +RVVGQ+EA S V++AIRRSR+GL+D +PYGSF+FLGPTGVGKTEL
Sbjct: 564 RDKLLHMEDALHQRVVGQEEACSLVADAIRRSRAGLADPSKPYGSFLFLGPTGVGKTELT 623
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
+ L+ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L
Sbjct: 624 RALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVL 683
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
LDE+EK + DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+ M E+
Sbjct: 684 LDEVEKTHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQQIQSMTGKPYEV 743
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK VM E+K RPEF+NRID+++VF L+ ++I SIA IQ+ L +L K M L+++
Sbjct: 744 IKDVVMEELKQTLRPEFLNRIDEVVVFHALDAQHIESIARIQIRRLAERLEKQEMQLEVT 803
Query: 668 KAALKKISNIGFDLIYGAR 686
AL +I+ +GFD ++GAR
Sbjct: 804 DTALSEIARVGFDPVFGAR 822
>gi|335425025|ref|ZP_08554016.1| ATP-dependent chaperone ClpB [Salinisphaera shabanensis E1L3A]
gi|334886701|gb|EGM25048.1| ATP-dependent chaperone ClpB [Salinisphaera shabanensis E1L3A]
Length = 861
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/708 (60%), Positives = 561/708 (79%), Gaps = 12/708 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ EE G L KYTIDLTE+A GKLDPVIGRD+EIRR IQVL RR+KNNP L
Sbjct: 143 GGENVDDANAEEQRGALDKYTIDLTERAEQGKLDPVIGRDEEIRRVIQVLSRRTKNNPTL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
+GEPGVGKTAIVEGLAQRIINGEVP SL K++L+LD+ ++AG KYRGEFEDRLK +L
Sbjct: 203 VGEPGVGKTAIVEGLAQRIINGEVPESLRDKRVLVLDLGGMIAGAKYRGEFEDRLKGVLS 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + II+FIDE+HT++G GK EGS+DAGNMLKP L+RGELHCIGATTLNEYR+ IE
Sbjct: 263 DLSKQEGRIILFIDEIHTLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLNEYRENIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EPD+E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 323 KDAALERRFQKVIVDEPDLEDTIAILRGLKERYEVHHGVDITDGAIIAAAKLSQRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+KI+IEIDSKPE +D+L+RRLIQLKIE +A+ +E DE SK RL +
Sbjct: 383 KLPDKAIDLIDEAASKIRIEIDSKPEELDRLDRRLIQLKIEKQALSKESDEGSKTRLDRL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EIN+LE +Y++LE+IWK EK + + +EE+E+ + ++ A R D+ +S+L+YG
Sbjct: 443 DEEINELEREYSDLEEIWKSEKASVAGAANKREELEQAKKELEAAQRARDFDRMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L E +Q Q P A K LL+ V EE+AEIVSR TGIPV+++++ ER+K
Sbjct: 503 RIPQLERELAE-AQAAEQTP-AATK--LLRNNVTDEEVAEIVSRWTGIPVNRMLEAERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+SAVS+AIRRSRSGLSD RP GSF+FLGPTGVGKTELCK++
Sbjct: 559 LLRMEDSLHERVIGQNEAVSAVSDAIRRSRSGLSDPNRPIGSFLFLGPTGVGKTELCKSI 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 619 ATFLFDTESAMVRIDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+E+ + ++
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQELSDTSYDTMRE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
+VM V +FRPEFINRID+ +VF L + I IA IQ+ L +L + + L IS AA
Sbjct: 739 SVMEVVAQHFRPEFINRIDESVVFHPLAQAQIREIARIQMRELHTRLAERELTLDISNAA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
+ K++ GFD +YGAR + K+S+ L+ ++P A I G+ +
Sbjct: 799 VDKLAEAGFDPVYGARPL---KRSIQTLV-----ENPLAKRILAGEFV 838
>gi|71276549|ref|ZP_00652823.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Dixon]
gi|170730931|ref|YP_001776364.1| ATP-dependent Clp protease subunit [Xylella fastidiosa M12]
gi|71162620|gb|EAO12348.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Dixon]
gi|71729142|gb|EAO31265.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Ann-1]
gi|167965724|gb|ACA12734.1| ATP-dependent Clp protease subunit [Xylella fastidiosa M12]
Length = 861
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/727 (58%), Positives = 572/727 (78%), Gaps = 16/727 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + ++ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQTENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKNEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I L+ ++++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG
Sbjct: 445 ERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L LE+ L SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+K
Sbjct: 505 VLPALEKQLVAASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEADLGRRVVGQEEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSLILLDE
Sbjct: 619 AEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII-- 608
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYT 738
Query: 609 --KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
K AVM V+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L +
Sbjct: 739 QMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESELKLDL 798
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + N+GFD +YGAR + K+++ L+ + A GD + G +D
Sbjct: 799 DDRALELLGNVGFDPVYGARPL---KRAIQSQLENPLAQQILAGAFVSGDTVQVG---VD 852
Query: 727 TLRMVYS 733
++V++
Sbjct: 853 GGKLVFA 859
>gi|15836983|ref|NP_297671.1| ATP-dependent Clp protease subunit [Xylella fastidiosa 9a5c]
gi|54035911|sp|Q9PGC1.1|CLPB_XYLFA RecName: Full=Chaperone protein ClpB
gi|9105213|gb|AAF83191.1|AE003889_8 ATP-dependent Clp protease subunit [Xylella fastidiosa 9a5c]
Length = 861
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/727 (58%), Positives = 572/727 (78%), Gaps = 16/727 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + ++ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQTENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L SK++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKNEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I L+ ++++LE++W+ EK ++ + +IKE IE+ +L + A R+ D+ +S+++YG
Sbjct: 445 ERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L LE+ L SQ + + FTL++ KV +EEIAE+VSR TGIPVSK+++ ER+K
Sbjct: 505 VLPALEKQLVAASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEADLGRRVVGQEEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSLILLDE
Sbjct: 619 AEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII-- 608
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D +
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSPEVYT 738
Query: 609 --KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
K AVM V+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + + L +
Sbjct: 739 QMKAAVMEVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLQGLEKRLAESELKLDL 798
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + N+GFD +YGAR + K+++ L+ + A GD + G +D
Sbjct: 799 DDRALELLGNVGFDPVYGARPL---KRAIQSQLENPLAQQILAEAFVSGDTVQVG---VD 852
Query: 727 TLRMVYS 733
++V++
Sbjct: 853 GGKLVFA 859
>gi|289661674|ref|ZP_06483255.1| ATP-dependent Clp protease [Xanthomonas campestris pv. vasculorum
NCPPB 702]
gi|289667092|ref|ZP_06488167.1| ATP-dependent Clp protease [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 861
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/682 (62%), Positives = 553/682 (81%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 445 ESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 505 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 557 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 617 ALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI 607
DE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 677 DEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEA 736
Query: 608 ---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF LN+ I SIA IQL+ L+ +L + + L
Sbjct: 737 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLNKAQIKSIARIQLHGLEKRLAERGLKL 796
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + N+GFD +YGAR
Sbjct: 797 DLDDAALELLGNVGFDPVYGAR 818
>gi|398857371|ref|ZP_10613071.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM79]
gi|398240962|gb|EJN26625.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM79]
Length = 854
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/676 (61%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTIDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEITRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPV+K+++ EREK
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|28868056|ref|NP_790675.1| clpB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213971039|ref|ZP_03399159.1| clpB protein [Pseudomonas syringae pv. tomato T1]
gi|301384237|ref|ZP_07232655.1| clpB protein [Pseudomonas syringae pv. tomato Max13]
gi|302059470|ref|ZP_07251011.1| clpB protein [Pseudomonas syringae pv. tomato K40]
gi|302134988|ref|ZP_07260978.1| clpB protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422296834|ref|ZP_16384494.1| clpB protein [Pseudomonas avellanae BPIC 631]
gi|422591482|ref|ZP_16666125.1| clpB protein [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|422659776|ref|ZP_16722198.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M302278]
gi|54035835|sp|Q889C2.1|CLPB_PSESM RecName: Full=Chaperone protein ClpB
gi|28851292|gb|AAO54370.1| clpB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213924147|gb|EEB57722.1| clpB protein [Pseudomonas syringae pv. tomato T1]
gi|330878991|gb|EGH13140.1| clpB protein [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|331018391|gb|EGH98447.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M302278]
gi|407991919|gb|EKG33653.1| clpB protein [Pseudomonas avellanae BPIC 631]
Length = 854
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/677 (63%), Positives = 548/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN NI EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNI-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+++EI +LE +YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQEEIVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|431931585|ref|YP_007244631.1| ATP-dependent chaperone ClpB [Thioflavicoccus mobilis 8321]
gi|431829888|gb|AGA91001.1| ATP-dependent chaperone ClpB [Thioflavicoccus mobilis 8321]
Length = 864
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/710 (59%), Positives = 560/710 (78%), Gaps = 10/710 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ E+ L+K++IDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQSVGDPNAEDTRQALQKFSIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L SK++L LD+A L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRLLALDMAALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+Y+E
Sbjct: 265 DVARQEGNVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHAVEITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA++++EIDS PE MD+L+RRLIQLKIE EA+++E DE+SKKRL +
Sbjct: 385 QLPDKAIDLIDEAAAQLRVEIDSMPEEMDRLDRRLIQLKIEQEAVRKETDEASKKRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I +LE ++++L++IWK EK ++ + IKEE+++ R + A R D +S+L+YG
Sbjct: 445 EEQIERLEREFSDLDEIWKAEKAAVQGTAHIKEELDRARFEYETARRAGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L Q + + LL+ KV +EEIAEIVS+ TGIPVS++++ ER+K
Sbjct: 505 RIPELERQLANAEQAE------QGETRLLRNKVTAEEIAEIVSKWTGIPVSRMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQDEA+ AVS+AIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEAALEHRVVGQDEALRAVSDAIRRSRAGLADPARPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSLILLDE
Sbjct: 619 AEFLFDTEEAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGDKEIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN ++VMTSNLGS+ I ++ + + +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVVVMTSNLGSEVIQRQAGEANYAAMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V+ FRPEFINR+D+I+VF L + I +IA IQ+ L+ +L M L+IS A
Sbjct: 739 ESVMEIVRQAFRPEFINRLDEIVVFHPLQPEQIRAIARIQIRYLQTRLADREMRLEISDA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
AL + GFD +YGAR + K+++ L+ ++ A GDLI
Sbjct: 799 ALDHLGEAGFDPVYGARPL---KRAIRTQLENPLAQAILAGRFSPGDLIE 845
>gi|374621369|ref|ZP_09693901.1| ATP-dependent chaperone ClpB [Ectothiorhodospira sp. PHS-1]
gi|373940502|gb|EHQ51047.1| ATP-dependent chaperone ClpB [Ectothiorhodospira sp. PHS-1]
Length = 864
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/677 (62%), Positives = 551/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQRVDDPNAEEQRKALEKYTIDLTERAEQGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI++GEVP L +++L LD+ L+AG K+RG+FE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVDGEVPEGLKDRRLLSLDMGALIAGAKFRGDFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+Y+E
Sbjct: 265 DLAKQEGRVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP++E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVNEPNVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE MD+LERRLIQLKIE EA+++E DE+S KRL +
Sbjct: 385 QLPDKAIDLVDEAASRIRMEIDSKPESMDRLERRLIQLKIEREALRKESDEASLKRLEAL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI++LE +Y++L++IWK EK + + IKEE+E+ RL++ A R D +S+L+YG
Sbjct: 445 EGEIDRLEREYSDLDEIWKAEKAALSGTASIKEELERARLELETARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L +Q ++ ++ LL+ KV EEIAE+VSR TGIPV+K+++ EREK
Sbjct: 505 RIPELERQLDMAAQAEM------HEMRLLRNKVTDEEIAEVVSRWTGIPVAKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEA+ AV++AIRR+R+GLSD RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLRMEEALTRRVVGQDEAVRAVADAIRRARAGLSDPNRPNGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ +E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AAFLFDTDEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN++IVMTSNLGS I+EM + + +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNSVIVMTSNLGSQLIQEMAGEEHYDQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+D+++VF L R I +I IQL+ L+ +L ++ L +S+A
Sbjct: 739 AAVMEVVGTHFRPEFINRVDEVVVFHPLGRDQIRAITTIQLDYLRRRLADRDLRLTVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALDRLGEAGFDPVYGAR 815
>gi|229588328|ref|YP_002870447.1| chaperone [Pseudomonas fluorescens SBW25]
gi|229360194|emb|CAY47051.1| chaperone [Pseudomonas fluorescens SBW25]
Length = 854
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEIVRLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTTHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINR+D++++F L R I I IQL L+ +L + + L +S+ AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLTERELSLDLSQEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|387769285|ref|ZP_10125549.1| ATP-dependent chaperone protein ClpB [Pasteurella bettyae CCUG
2042]
gi|386906918|gb|EIJ71639.1| ATP-dependent chaperone protein ClpB [Pasteurella bettyae CCUG
2042]
Length = 856
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/716 (58%), Positives = 567/716 (79%), Gaps = 14/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGESVKDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAQEEGKVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+K+E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALKKEEDEASRKRLTML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA L++IWK EK + +Q IK E+E VR+++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELDEIWKSEKATLSGTQHIKAELENVRMQMEQARRAGDLNKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L + ++ + + TLL+ +V EEIAE++SR TGIPVS++++ E+EK
Sbjct: 505 VIPTLEKQLSDANKAE------GKEMTLLRNRVTDEEIAEVLSRATGIPVSRMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQGEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDDEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + + +K
Sbjct: 679 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNQDLGYDGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI SIA IQL L ++ + D+ S A
Sbjct: 739 LVMSVVGQHFRPEFINRIDETVVFHPLAKENIKSIAQIQLARLIKRMAEHGYDIHFSDAT 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L IS +G+D IYGAR + K+++ + ++P A I G L+ P ++D
Sbjct: 799 LDFISEVGYDPIYGARPL---KRAIQQEI-----ENPLAQQILSGKLLPASPVTVD 846
>gi|407368577|ref|ZP_11115109.1| chaperone ClpB [Pseudomonas mandelii JR-1]
Length = 854
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/676 (61%), Positives = 552/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|441504482|ref|ZP_20986476.1| ClpB protein [Photobacterium sp. AK15]
gi|441427949|gb|ELR65417.1| ClpB protein [Photobacterium sp. AK15]
Length = 857
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/677 (62%), Positives = 552/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ EE+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQNVDDPNAEENRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRHKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVEEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+ +E D++S KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALVKESDDASHKRLKDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++K E +YA LE++W EK + +Q IK E+E+ R + A R D +S+L+YG
Sbjct: 445 SEELDKKEREYAELEEVWNAEKAALSGTQHIKTELEQARTDMEIARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q ++Q + +LLK KV EIAE++SR TGIPV+K+++ EREK
Sbjct: 505 KIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVAKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L KRV+GQDEA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLHMEEALHKRVIGQDEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGSD+I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSDRIQEHFGELDYDGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINR+D+ +VF L +++I +IANIQ+ L +L + + L++ ++
Sbjct: 739 HTVMEVVGQHFRPEFINRVDETVVFHPLGQEHIKNIANIQIMRLVKRLEEKDYQLELQES 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ IS GFD +YGAR
Sbjct: 799 ALELISQAGFDPVYGAR 815
>gi|312958896|ref|ZP_07773415.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Pseudomonas
fluorescens WH6]
gi|311286666|gb|EFQ65228.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Pseudomonas
fluorescens WH6]
Length = 854
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEILRLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMEHLLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDALTSHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINR+D++++F L R I I IQL L+ +L + + L++S+ AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLELSREALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|398901541|ref|ZP_10650394.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM50]
gi|398179622|gb|EJM67226.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM50]
Length = 854
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/676 (61%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTIDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPV+K+++ EREK
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|398840843|ref|ZP_10598074.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM102]
gi|398109674|gb|EJL99594.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM102]
Length = 854
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/676 (61%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTIDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLERL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPV+K+++ EREK
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|395499146|ref|ZP_10430725.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. PAMC 25886]
Length = 854
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/676 (62%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE +KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEPAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S+ A
Sbjct: 738 AVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELSLELSREA 797
Query: 671 LKKISNIGFDLIYGAR 686
L K+ +G+D +YGAR
Sbjct: 798 LDKLIAVGYDPVYGAR 813
>gi|374705469|ref|ZP_09712339.1| ATP-dependent chaperone ClpB [Pseudomonas sp. S9]
Length = 854
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/677 (62%), Positives = 549/677 (81%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN NI EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNI-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYI
Sbjct: 264 NELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPSLARGELHCVGATTLDEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHRVAITDSAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E EA+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEREALKKEDDEATLKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+K +I +LE +YA+LE IWK EK ++ S QI+++IE+ R ++ A RKSD + ++KL+Y
Sbjct: 444 LKDDIARLEREYADLEDIWKSEKAEVQGSAQIQQKIEQARQELETARRKSDLEAMAKLQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+ LER L+ Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 SVIPDLERSLQMVDQ------HGKTENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+LL +RV+GQ+E + AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 558 KLLKMEDLLHQRVIGQNEGVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT++VMTSNLGS +I+E+ GD+E
Sbjct: 678 EVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVVVMTSNLGSAQIQEL-VGDREAQH 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L +L + + L++S
Sbjct: 737 AAVMDAVTTHFRPEFINRIDEVVVFEPLAREKIGGIAKIQLGRLHQRLAERELSLELSDE 796
Query: 670 ALKKISNIGFDLIYGAR 686
A+ K+ +G+D +YGAR
Sbjct: 797 AMDKLIAVGYDPVYGAR 813
>gi|352105799|ref|ZP_08960963.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
HAL1]
gi|350598222|gb|EHA14345.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
HAL1]
Length = 859
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/683 (61%), Positives = 554/683 (81%), Gaps = 7/683 (1%)
Query: 6 NSLNVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSK 65
NSL G + E+ L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+K
Sbjct: 141 NSLR-GGATVDDANAEDQREALNKYTMDLTQRALDGKLDPVIGRDDEIRRTIQVLQRRTK 199
Query: 66 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 125
NNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERL 259
Query: 126 KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 185
K +LKE+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELSQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319
Query: 186 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 245
R+YIEKDAA ERRFQK+LV+EP E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTR 379
Query: 246 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 305
YISDR +PDKAIDLIDEAA++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASRIRMELDSKPESMDRLDRRLIQLKMEREALKKETDEASKK 439
Query: 306 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 365
RL + +I++LE +YA+L++IWK EK I+ + Q K ++E+ RL + +A R+ D +S
Sbjct: 440 RLEALSAQIHELEREYADLDEIWKAEKASIQGAAQFKADLEQARLDLEQARRQGDLGRMS 499
Query: 366 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
+++YG++ LE+ + E + + + + LL++ V EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGKIPALEKKIAESGEGEA----DTSSHQLLRSNVTEEEIAEVVSRWTGIPVSKMLE 555
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
ER+KLL +E L +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLRMEEALHERVIGQDEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 615
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
LCK+L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 603
+LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M +
Sbjct: 676 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDS 735
Query: 604 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
D E++K VM V +FRPE INRID+++VF L ++ I +IA IQL LK +L + ++
Sbjct: 736 DYEVMKNLVMEVVGNHFRPELINRIDEVVVFHALGQEQIQAIAGIQLERLKLRLAEHDLK 795
Query: 664 LKISKAALKKISNIGFDLIYGAR 686
L++S A+ +++ +GFD +YGAR
Sbjct: 796 LEVSPEAMAQLAVVGFDPVYGAR 818
>gi|408483875|ref|ZP_11190094.1| chaperone [Pseudomonas sp. R81]
Length = 854
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/666 (63%), Positives = 547/666 (82%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KKRL +++EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEIVRLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E+LL +
Sbjct: 515 MVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLKMESLLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
ILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ + +F
Sbjct: 689 ILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREGQRAAVMDALTSHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINR+D++++F L R I I IQL L+ +L + +DL +S AL K+ +G+D
Sbjct: 748 RPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELDLVLSSEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|384429028|ref|YP_005638388.1| chaperone ClpB [Xanthomonas campestris pv. raphani 756C]
gi|341938131|gb|AEL08270.1| chaperone ClpB [Xanthomonas campestris pv. raphani 756C]
Length = 859
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/682 (61%), Positives = 552/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 143 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 263 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 323 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 383 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 443 ESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 503 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 554
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L +RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 555 DKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 614
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 615 ALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 674
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI 607
DE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 675 DEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEA 734
Query: 608 ---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 735 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 794
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AL+ + N+GFD +YGAR
Sbjct: 795 DLDDPALELLGNVGFDPVYGAR 816
>gi|21232500|ref|NP_638417.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767416|ref|YP_242178.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990519|ref|YP_001902529.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris
str. B100]
gi|54035864|sp|Q8P6A0.1|CLPB_XANCP RecName: Full=Chaperone protein ClpB
gi|21114288|gb|AAM42341.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572748|gb|AAY48158.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732279|emb|CAP50471.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris]
Length = 861
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/682 (61%), Positives = 552/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 445 ESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 505 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L +RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 557 DKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 617 ALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI 607
DE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 677 DEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEA 736
Query: 608 ---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 737 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 796
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AL+ + N+GFD +YGAR
Sbjct: 797 DLDDPALELLGNVGFDPVYGAR 818
>gi|399001519|ref|ZP_10704232.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM18]
gi|398127409|gb|EJM16819.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM18]
Length = 854
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/676 (61%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYTIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTIDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK + S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIARHEREYSDLEEIWNSEKAEVHGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPV+K+++ EREK
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-IGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|398931122|ref|ZP_10664981.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM48]
gi|398164265|gb|EJM52407.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM48]
Length = 854
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/676 (61%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|226943326|ref|YP_002798399.1| ATP-dependent protease [Azotobacter vinelandii DJ]
gi|226718253|gb|ACO77424.1| ATP-dependent protease [Azotobacter vinelandii DJ]
Length = 854
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/676 (61%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KY +D+T +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQTVNDPNAEESRQALDKYCVDMTARAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDGLRDKRLLALDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKETDEATKKRLAKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I KLE +YA+LE+IWK EK ++ S QI++++E+ +L + A RK D +++L+YG
Sbjct: 445 EEDIAKLEREYADLEEIWKSEKAEVQGSAQIQQQLEQAKLDLEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L + D P LL+ +V EEIAE+VS+ TGIPV+K+++ EREK
Sbjct: 505 LIPELERKL---ASADGGQPRENQ---LLRNRVTDEEIAEVVSKWTGIPVAKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E LL +RV+GQ+EA++AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEELLHQRVIGQNEAVTAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE
Sbjct: 619 AEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT++VMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVVVMTSNLGSAQIQEL-AGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S A
Sbjct: 738 AVMDAVSHHFRPEFINRIDEVVVFDPLAREQIAGIAEIQLKRLRQRLAERELSLELSDEA 797
Query: 671 LKKISNIGFDLIYGAR 686
L K+ +G+D +YGAR
Sbjct: 798 LDKLIAVGYDPVYGAR 813
>gi|410631289|ref|ZP_11341966.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
arctica BSs20135]
gi|410149112|dbj|GAC18833.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
arctica BSs20135]
Length = 856
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/717 (59%), Positives = 561/717 (78%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVTDPNAEDVRQALDKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE MDKLERR+IQLK+E +A+ +E DE+S KRL +I
Sbjct: 385 QLPDKAIDLIDEAASSIRLQMDSKPEDMDKLERRIIQLKLEEQALAKEKDEASHKRLEII 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E + E K++ EKIW EK ++ +Q I+ E+E+ +L + A R SD +S+L+YG
Sbjct: 445 ELEREQAEHKFSEFEKIWVAEKQAMQGTQTIRSELEQAKLDLEIARRASDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE L+ ++ + Q + TLLK KV EIA+++SR TGIPVSK+++ E+ K
Sbjct: 505 RIPELEAKLELATESETQ------ETTLLKNKVTESEIADVLSRWTGIPVSKMLEGEKAK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L KRVVGQ EA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLSMEKALHKRVVGQSEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E+++IRIDMSEF+EKHS++R++GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFLFDTEDAMIRIDMSEFMEKHSVARMVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E+ + + + +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEVSGESNYQQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+DDI+VF L ++ I +IA IQL LK +L L++S A
Sbjct: 739 SLVMTAVNDHFRPEFLNRVDDIVVFHPLGKEQITAIAKIQLRSLKERLADKGYKLELSPA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+KI++ GFD +YGAR + K+++ + ++P A I GDL G +D
Sbjct: 799 ALEKIADAGFDPVYGARPL---KRAIQTEI-----ENPLAQKILSGDLAKDGTIKID 847
>gi|392953749|ref|ZP_10319303.1| ATP-dependent chaperone ClpB [Hydrocarboniphaga effusa AP103]
gi|391859264|gb|EIT69793.1| ATP-dependent chaperone ClpB [Hydrocarboniphaga effusa AP103]
Length = 863
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/681 (61%), Positives = 547/681 (80%), Gaps = 10/681 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
NG + SQ EE+ L+KYTIDLTE+AR GKLDPVIGRD+EIRR IQVL RR+KNNP L
Sbjct: 145 NGAKVDSQNAEENRQSLEKYTIDLTERARSGKLDPVIGRDEEIRRLIQVLSRRTKNNPAL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRLLSLDLGSLIAGAKFRGEFEERLKNVLG 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKAEGGVILFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E++I+ILRGL+ +YE+HHGV+ITD AIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVGEPSVEDSIAILRGLKARYELHHGVDITDGAIVAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I+IE DSKPE MD+LERRLIQLKIE EA+K+E DE +K+ L +
Sbjct: 385 NLPDKAIDLIDEAASRIRIEKDSKPEAMDRLERRLIQLKIEREALKKEKDEGAKRSLTAL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I KLE +YA+LE+IWK E + S IKEEIE+VRL + A R D +++L+YG
Sbjct: 445 EEDIVKLEREYADLEEIWKAEMATVSGSAHIKEEIERVRLDMETARRAGDLSRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LER L S + Q K TL++ V EEIAE+V+R TGIPV+K+++ ER+K
Sbjct: 505 KLPELERRLAAASTEQKQ-----TKATLVRNNVTEEEIAEVVARWTGIPVAKLMEGERDK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQ+EA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 560 LLRMEEALHQRVVGQNEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRR+PYS++LLDE
Sbjct: 620 ASFLFDTEEAMVRIDMSEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRRPYSVVLLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-----EKGDK 605
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN +IVMTSNLGS+ I++M D
Sbjct: 680 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSNLIQDMMSTQSSSNDY 739
Query: 606 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
I+ AVM V +FRPEFINRID+ +VF L + I SIA +Q + +L + N+ ++
Sbjct: 740 AAIREAVMTVVGQHFRPEFINRIDESVVFHPLGSQQIRSIAKVQSQNVVKRLAERNIAIE 799
Query: 666 ISKAALKKISNIGFDLIYGAR 686
S AAL KI+ G+D +YGAR
Sbjct: 800 FSDAALDKIAEAGYDPVYGAR 820
>gi|398913136|ref|ZP_10656309.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM49]
gi|398181097|gb|EJM68668.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM49]
Length = 854
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/676 (62%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|395795264|ref|ZP_10474573.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. Ag1]
gi|421142087|ref|ZP_15602063.1| ClpB protein [Pseudomonas fluorescens BBc6R8]
gi|395340627|gb|EJF72459.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. Ag1]
gi|404506481|gb|EKA20475.1| ClpB protein [Pseudomonas fluorescens BBc6R8]
Length = 854
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/676 (62%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE +KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEPAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L +S+ A
Sbjct: 738 AVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELSLVLSREA 797
Query: 671 LKKISNIGFDLIYGAR 686
L K+ +G+D +YGAR
Sbjct: 798 LDKLIAVGYDPVYGAR 813
>gi|422653309|ref|ZP_16716077.1| clpB protein [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330966360|gb|EGH66620.1| clpB protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 854
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/677 (63%), Positives = 547/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN NI EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNI-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+++EI +LE +YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQEEIVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +F PEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVSTHFHPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|398896328|ref|ZP_10647457.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM55]
gi|398178588|gb|EJM66233.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM55]
Length = 854
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/676 (61%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QDEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|319786186|ref|YP_004145661.1| ATP-dependent chaperone ClpB [Pseudoxanthomonas suwonensis 11-1]
gi|317464698|gb|ADV26430.1| ATP-dependent chaperone ClpB [Pseudoxanthomonas suwonensis 11-1]
Length = 861
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/680 (61%), Positives = 549/680 (80%), Gaps = 10/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ E+ L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEDQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVKGEVPEQLKGKRVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQY+E
Sbjct: 265 DLAKNEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRL+QLKI+ E +K+E D++SK+RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLVQLKIQREMLKKEKDDASKQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I KLE ++++L ++WK EK ++ + ++KE++E+ R+++ A R D+ +S+++YG
Sbjct: 445 EADIEKLEREFSDLNEVWKSEKAALQGATRVKEQLEQARIELEAAQRAQDYARMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L ++ F L++ KV EEIAE+VSR TGIPVSK+++ ER+K
Sbjct: 505 RIPALEKQLAAAAE------AEKKDFKLVQDKVTEEEIAEVVSRWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI AVS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQQLHRRVVGQDEAIRAVSDAVRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKGL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE
Sbjct: 619 AEFLFDSAEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI-- 607
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSPEAYV 738
Query: 608 -IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K AVM V+ +FRPEFINR+D+I+VF L++ I SIA IQL+ L+ +L + + L +
Sbjct: 739 QMKAAVMGVVQAHFRPEFINRLDEIVVFHPLDKAQITSIARIQLHGLEKRLHERGLKLDL 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL+ + N+GFD +YGAR
Sbjct: 799 SDAALELLGNVGFDPVYGAR 818
>gi|422406178|ref|ZP_16483211.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330881337|gb|EGH15486.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 855
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/678 (63%), Positives = 548/678 (80%), Gaps = 13/678 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIG-EPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
LIG EPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +
Sbjct: 204 LIGGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSL 263
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQY
Sbjct: 264 LNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQY 323
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+
Sbjct: 324 IEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYIT 383
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 DRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLE 443
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
+++E+ +LE +YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+
Sbjct: 444 KLQEEVVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQ 503
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YG + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER
Sbjct: 504 YGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGER 557
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
EKLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 EKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCK 617
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILL
Sbjct: 618 ALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILL 677
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E
Sbjct: 678 DEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQ 736
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
+ AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + L +S
Sbjct: 737 RAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALTLSP 796
Query: 669 AALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 EALDKLIAVGYDPVYGAR 814
>gi|398992528|ref|ZP_10695493.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM21]
gi|398136829|gb|EJM25907.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM21]
Length = 854
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/676 (61%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L +S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLDLSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|325916266|ref|ZP_08178547.1| ATP-dependent chaperone ClpB [Xanthomonas vesicatoria ATCC 35937]
gi|325537560|gb|EGD09275.1| ATP-dependent chaperone ClpB [Xanthomonas vesicatoria ATCC 35937]
Length = 859
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/682 (61%), Positives = 552/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 143 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 263 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 323 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 383 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG
Sbjct: 443 ETDIDKLEREFSDLNEVWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 503 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 554
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 555 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 614
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 615 ALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 674
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 675 DEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 734
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL+ L+ +L + + L
Sbjct: 735 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLHGLEKRLSERGLKL 794
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + N+GFD +YGAR
Sbjct: 795 DLDDAALELLGNVGFDPVYGAR 816
>gi|258545487|ref|ZP_05705721.1| chaperone protein ClpB [Cardiobacterium hominis ATCC 15826]
gi|258519187|gb|EEV88046.1| chaperone protein ClpB [Cardiobacterium hominis ATCC 15826]
Length = 856
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/708 (59%), Positives = 575/708 (81%), Gaps = 13/708 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + E+ LKKYTID+T +A GK+DPVIGRD+EIRRA+Q+LQRR+KNNPVL
Sbjct: 143 GGEPVTDEAAEDKREALKKYTIDVTARAEQGKIDPVIGRDEEIRRAMQILQRRNKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL K++L LD+A LLAGTKYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRLLSLDLAALLAGTKYRGEFEERLKAVLT 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYRQY+E
Sbjct: 263 DIEKANGQIILFIDEIHTMVGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEYRQYME 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++VEEP +E+TI+ILRGLQ++YEVHHG++ITDPA+VAA+ LS RYI++R
Sbjct: 323 KDAALERRFQKVMVEEPTVEDTIAILRGLQERYEVHHGIDITDPALVAAAVLSNRYITNR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA+I++E+DSKPE MD+++RRLIQLK+E A+++E+D++SKKRL +
Sbjct: 383 QLPDKAIDLIDEAAAQIRMELDSKPETMDRIDRRLIQLKMERLALEKEHDDASKKRLADL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI+KLE +YA+LE++W+ EK I+ S IKEEI+++R+++ A R+ D+ +S+++YG
Sbjct: 443 QDEIDKLEKEYADLEEVWQAEKATIQGSAGIKEEIDRLRVELEAAKRRGDYAAMSEIQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L S+ P + TL++++V EEIA+IVSR TGIPV+K+++ E+EK
Sbjct: 503 KIPALEKQLAH-SETAAAKPQH----TLVRSEVTEEEIAQIVSRWTGIPVAKMLESEKEK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQ+ A+ AV+NAIRR+R+GLSD RP GSF+FLGPTGVGKTELC+TL
Sbjct: 558 LLALESALGARVVGQETAVEAVANAIRRNRAGLSDPNRPIGSFLFLGPTGVGKTELCRTL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+++E+++RIDMSEF+EKHS++RLIGAPPGY+GY++GGYLTE VRR+PYS++L DE
Sbjct: 618 AAFLFDSDEAMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRRPYSVVLFDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS I+EM D E +KL
Sbjct: 678 IEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQEMNYDDYEAMKL 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEFINRID+ +VF L ++++ IA IQL L+ +L + + L+IS AA
Sbjct: 738 AVMEIVSAHFRPEFINRIDETVVFHALGKEHMQGIATIQLARLRKRLAERELGLEISPAA 797
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
L ++ +G+D ++GAR + K+++ + H ++P A I GD +
Sbjct: 798 LAQLVEVGYDPVFGARPL---KRAI-----QTHLENPLAQRILAGDFL 837
>gi|289651391|ref|ZP_06482734.1| clpB protein [Pseudomonas syringae pv. aesculi str. 2250]
Length = 854
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/677 (62%), Positives = 547/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+++E+ +LE +YA+LE+IW EK + S I+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQEEVVRLEKEYADLEEIWTSEKAEVTGSAHIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEKGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + L +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALTLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|451822903|ref|YP_007459177.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775703|gb|AGF46744.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 865
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/677 (62%), Positives = 548/677 (80%), Gaps = 7/677 (1%)
Query: 14 NILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGE 73
+I S DE + L KYT DLT KA GKLDPVIGRDDEIRR IQ+LQRR+KNNPVLIGE
Sbjct: 147 SINSSDDELNRNSLAKYTTDLTAKASSGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGE 206
Query: 74 PGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEIS 133
PGVGKTAIVEGLAQRI+N EVP++L KK+L LD+A L+AG K+RGEFE+RLK +LKE+S
Sbjct: 207 PGVGKTAIVEGLAQRIVNSEVPDNLKGKKVLSLDMASLVAGAKFRGEFEERLKSVLKELS 266
Query: 134 NNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDA 193
+ + IIFIDELHT++G GK EGS+DAGNMLKP L+RG+LHCIGATTL+EYR+YIEKDA
Sbjct: 267 LDSGNNIIFIDELHTIMGAGKAEGSMDAGNMLKPALARGDLHCIGATTLDEYRKYIEKDA 326
Query: 194 AFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMP 253
A ERRFQK+LV+EPD+E TI+ILRGL+++YE+HHG++ITDPAIVAA+ELS RYI+DRF+P
Sbjct: 327 ALERRFQKVLVDEPDVESTIAILRGLRERYEIHHGIQITDPAIVAAAELSNRYITDRFLP 386
Query: 254 DKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKE 313
DKAIDLIDEA ++I++EIDSKPE+MDKL+RR+IQLKIE EA+KRE DESSKKRL I++E
Sbjct: 387 DKAIDLIDEAGSRIRMEIDSKPEVMDKLDRRIIQLKIEREAVKRETDESSKKRLSFIEEE 446
Query: 314 INKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELN 373
+ KL+ +Y + E IWK EK ++ +Q IKEEI+ ++ K+ + R + +++++Y L
Sbjct: 447 LAKLQREYGDYEDIWKSEKAAVQGTQAIKEEIDNLKAKMAELQRTGQYDKLAEIQYAVLP 506
Query: 374 KLERILKEKSQKDIQLPNNAN----KFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
LE LK + L NN N KF LL+ +VG+EEIAE+VSR TGIPVSK+++ ERE
Sbjct: 507 SLELRLK---ASEAGLENNHNSEERKFKLLRIQVGAEEIAEVVSRATGIPVSKMMKGERE 563
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL++ + L RVVGQ+EA+ AVS+AI RSR+GLSD+ RP GSF+FLGPTGVGKTEL +
Sbjct: 564 KLLHLNDFLSSRVVGQNEAVQAVSDAILRSRAGLSDSARPSGSFLFLGPTGVGKTELARA 623
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F++ + IIR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY +ILLD
Sbjct: 624 LTEFMFDSSDHIIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVILLD 683
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
EIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGS +I+ M + E ++
Sbjct: 684 EIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSSEIQNMHEKTYEDVR 743
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ ++K RPEF+NRIDDI+VF L RK++ SI IQL LK ++ M + +S
Sbjct: 744 EVVLEKLKQVLRPEFLNRIDDIVVFHNLERKHMNSIVRIQLERLKYRIENKGMYINLSDE 803
Query: 670 ALKKISNIGFDLIYGAR 686
A+ ++SN+GFD +GAR
Sbjct: 804 AISELSNVGFDHQFGAR 820
>gi|398865238|ref|ZP_10620760.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM78]
gi|398243762|gb|EJN29341.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM78]
Length = 854
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/676 (62%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIARLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELESARRKGDLSRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREGQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|373468011|ref|ZP_09559297.1| ATP-dependent chaperone protein ClpB [Haemophilus sp. oral taxon
851 str. F0397]
gi|371757049|gb|EHO45848.1| ATP-dependent chaperone protein ClpB [Haemophilus sp. oral taxon
851 str. F0397]
Length = 856
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/676 (61%), Positives = 548/676 (81%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +EN L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMENELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKEESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|254230259|ref|ZP_04923650.1| chaperone ClpB [Vibrio sp. Ex25]
gi|262395161|ref|YP_003287015.1| ClpB protein [Vibrio sp. Ex25]
gi|451977393|ref|ZP_21927478.1| chaperone ClpB [Vibrio alginolyticus E0666]
gi|151937239|gb|EDN56106.1| chaperone ClpB [Vibrio sp. Ex25]
gi|262338755|gb|ACY52550.1| ClpB protein [Vibrio sp. Ex25]
gi|451929725|gb|EMD77457.1| chaperone ClpB [Vibrio alginolyticus E0666]
Length = 857
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/677 (61%), Positives = 548/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLKAL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N+ E +YA LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L RVVGQ EA+S VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHNRVVGQSEAVSVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+I+VF L +++I SIA+IQL L +L + L++S
Sbjct: 739 SEVMDVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|53802726|ref|YP_115493.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Methylococcus
capsulatus str. Bath]
gi|53756487|gb|AAU90778.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Methylococcus
capsulatus str. Bath]
Length = 859
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/662 (63%), Positives = 536/662 (80%), Gaps = 9/662 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LQKYTIDLTERAERGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP + K++L LD+A L+AG K+RGEFE+RLK +L +I+ + +I+FIDEL
Sbjct: 221 QRIVNGEVPEGVKGKRLLALDMAGLIAGAKFRGEFEERLKGVLNDIAKQEGRVILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YEVHHGV ITDPAIVAA+ LS+RYI+DR +PDKAIDL+DEAA++
Sbjct: 341 PTVEDTIAILRGLKERYEVHHGVTITDPAIVAAATLSHRYITDRQLPDKAIDLVDEAASR 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDSKPE MD+L+RRLIQL+IE EA+K+E DE+SKKRL ++ EI KLE +YA+LE+
Sbjct: 401 IRMEIDSKPEEMDRLDRRLIQLRIEREALKKETDEASKKRLEALEGEIGKLEKEYADLEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK + + IKEE+EK RL ++ A R D +++Y + LE+ L
Sbjct: 461 IWKSEKARLSGAASIKEELEKARLDLDNAKRSGDLTRAGQIQYERIPALEKRLA------ 514
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ ++F LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL++E L +RVVGQ
Sbjct: 515 VAEAGEDSEFRLLRNKVTDEEIAEVVSKWTGIPVAKMLEGEREKLLHMEENLSRRVVGQQ 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EAI+AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ +E+++RIDM
Sbjct: 575 EAITAVANAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALAEFLFDTDEAMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN+LLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKIYFRPEF 624
DDGRLTD GRT++FRN ++VMTSNLGS++I+E+ G+ +K VM V YFRPEF
Sbjct: 695 DDGRLTDGHGRTVDFRNAVVVMTSNLGSNRIQEL-AGEAHYAEMKAEVMEIVGQYFRPEF 753
Query: 625 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 684
INRID+ +VF L R+ I +IA +Q+ L+ +L + L +S AAL + GFD +YG
Sbjct: 754 INRIDEAVVFHPLGREQIRAIARLQVRHLQERLEARELSLVVSDAALDLLGEAGFDPVYG 813
Query: 685 AR 686
AR
Sbjct: 814 AR 815
>gi|398944095|ref|ZP_10671062.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM41(2012)]
gi|398158504|gb|EJM46848.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM41(2012)]
Length = 854
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/676 (61%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRHEREYSDLEEIWNAEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 IIPDLERSLQMVDQ------HGKTENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|392419721|ref|YP_006456325.1| ClpB protein [Pseudomonas stutzeri CCUG 29243]
gi|390981909|gb|AFM31902.1| ClpB protein [Pseudomonas stutzeri CCUG 29243]
Length = 854
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/686 (61%), Positives = 558/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G + ++ + EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAISNLRGGDAVNDPNAEESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E++KKRL ++ +I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 435 EATKKRLAKLEDDIAKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++L+YG + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LARMAELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ ER+KLL +E++L RV+GQ EA+ AVSNA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+
Sbjct: 669 KPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD + + AVM+ V +FRPEFINRID+++VF L R+ I IA+IQL L+ +L +
Sbjct: 729 -VGDPDAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L++S+ A+ K+ IG+D +YGAR
Sbjct: 788 ELSLELSQEAMDKLIAIGYDPVYGAR 813
>gi|398873431|ref|ZP_10628689.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM74]
gi|398199644|gb|EJM86580.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM74]
Length = 854
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/676 (61%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + + LL++KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPDLERSLQMVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|91227643|ref|ZP_01261920.1| ClpB protein [Vibrio alginolyticus 12G01]
gi|269966581|ref|ZP_06180662.1| clpB protein [Vibrio alginolyticus 40B]
gi|91188422|gb|EAS74716.1| ClpB protein [Vibrio alginolyticus 12G01]
gi|269828766|gb|EEZ83019.1| clpB protein [Vibrio alginolyticus 40B]
Length = 857
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/677 (61%), Positives = 548/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLKAL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N+ E +YA LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L RVVGQ EA+S VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHNRVVGQSEAVSVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+I+VF L +++I SIA+IQL L +L + L++S
Sbjct: 739 SEVMDVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|260903275|ref|ZP_05911670.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
AQ4037]
gi|308107960|gb|EFO45500.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
AQ4037]
Length = 823
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/677 (61%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 111 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 291 KDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL +
Sbjct: 351 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLQAL 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+N+ E +YA LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 411 NDELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 471 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L RVVGQ EA++ VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 525 LLRMEDVLHNRVVGQSEAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 585 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYQGIK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+I+VF L +++I SIA+IQL L +L + L++S
Sbjct: 705 SEVMDVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDK 764
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 765 ALDLIAQVGFDPVYGAR 781
>gi|452746805|ref|ZP_21946615.1| ClpB protein [Pseudomonas stutzeri NF13]
gi|452009282|gb|EME01505.1| ClpB protein [Pseudomonas stutzeri NF13]
Length = 854
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/686 (60%), Positives = 558/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G + ++ + EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAISNLRGGDAVNDPNAEESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E++KKRL ++ +I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 435 EATKKRLAKLEDDIAKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++L+YG + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LARMAELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ ER+KLL +E++L RV+GQ EA+ AVSNA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+
Sbjct: 669 KPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD + + AVM+ V +FRPEFINRID+++VF L R+ I IA+IQL L+ +L +
Sbjct: 729 -VGDPDAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L++S+ A+ K+ +G+D +YGAR
Sbjct: 788 ELSLELSQEAMDKLIAVGYDPVYGAR 813
>gi|390949641|ref|YP_006413400.1| ATP-dependent chaperone ClpB [Thiocystis violascens DSM 198]
gi|390426210|gb|AFL73275.1| ATP-dependent chaperone ClpB [Thiocystis violascens DSM 198]
Length = 866
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/667 (62%), Positives = 542/667 (81%), Gaps = 7/667 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 156 EEQRQALQKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 215
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
IVEGLAQRI+NGEVP L +K++L LD+A L+AG K+RGEFE+RLK +L +I + +I
Sbjct: 216 IVEGLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERLKAVLNDIGRQEGQVI 275
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQ
Sbjct: 276 LFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQ 335
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LV+EP++E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+RYI+DR +PDKAIDLI
Sbjct: 336 KVLVDEPNVEDTIAILRGLKERYEVHHAVEITDPAIVAAAVLSHRYIADRQLPDKAIDLI 395
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDS PE MDKL RRLIQLKIE A+K+E DE+S+KRL ++ +I +LE +
Sbjct: 396 DEAASQIRMEIDSMPEEMDKLSRRLIQLKIERMALKKESDEASRKRLSDLEGQIERLERE 455
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
+A+L++IWK EK ++ + IKE +++ R+++ A R SD +S+L+YG + +LE+ L
Sbjct: 456 FADLDEIWKSEKAAVQGTAHIKEALDRARMEMETARRASDLARMSELQYGRIPELEKQLA 515
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
+ + LL+TKV EEIAEIVS+ TGIPVS++++ ER+KLL +E+ + +
Sbjct: 516 RAGE------GGQGENRLLRTKVTEEEIAEIVSKWTGIPVSRMLEGERDKLLRMESEIER 569
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RVVGQ+EA+ +VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+A +F+ EE+
Sbjct: 570 RVVGQNEAVRSVSDAVRRSRAGLSDPGRPIGSFLFLGPTGVGKTELCKALAAFLFDTEEA 629
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+E+HS++RLIGAPPGY+GYEEGGYLTE +RR+PYSLILLDE+EKA+ DVFN
Sbjct: 630 MVRIDMSEFMERHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDEVEKAHPDVFN 689
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 619
+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++ + + +K AVM EV+
Sbjct: 690 VLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSSIIQQRAGEANYAAMKEAVMEEVRHA 749
Query: 620 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 679
FRPEFINR+D+I+VF L I +IA IQL+ L+ +L +M L + +AL + GF
Sbjct: 750 FRPEFINRLDEIVVFHPLQPSQIRAIARIQLDFLQQRLADRDMRLTVDDSALDHLGAAGF 809
Query: 680 DLIYGAR 686
D +YGAR
Sbjct: 810 DPVYGAR 816
>gi|430761748|ref|YP_007217605.1| ClpB protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430011372|gb|AGA34124.1| ClpB protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 857
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/678 (61%), Positives = 557/678 (82%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ E+ L+KYTIDLTE+A GKLDPVIGRDDEIRRA+QVLQRR+KNNPVL
Sbjct: 145 GGASVDDPSAEDTRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRAVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ LLAG KYRG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKDKRVLALDLGALLAGAKYRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHG+EITDPAIVAA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTLEDTIAILRGLKERYEVHHGIEITDPAIVAAAQLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEA+++I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL +
Sbjct: 385 QLPDKAIDLVDEASSRIRMEIDSKPEEMDRLDRRLIQLKIEREAMKKETDEASRKRLDAL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI +LE +Y++LE+IWK EK + + QIKE++E+ R+++ A R D +S+L+YG
Sbjct: 445 EDEIERLEREYSDLEEIWKSEKAAVTGAAQIKEDLERARMELETARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +L++ L++ ++ + + + LL+ KV EE+AE+VSR TGIPVSK+++ E++K
Sbjct: 505 RIPELQKALEQAAELETR------ETRLLRNKVTDEEVAEVVSRWTGIPVSKMLEGEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + +RVVGQDEA+ AV+NAIRR+R+GLSD RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLRMEEAVGQRVVGQDEAVRAVANAIRRARAGLSDPNRPSGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ E++++RIDMSEF+EKHS++R+IGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AAFLFDTEDAMVRIDMSEFMEKHSVARMIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
+EKA+ DVFN+LLQ+LDDGRLTD GRT++FRNT+IVMTSNLGS I+EM G++ +
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSQLIQEM-AGEEHYAQM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V +FRPEFINR+DD++VF L R+ I +I +IQL +L+ +L + ++ ++S+
Sbjct: 738 KAAVMEVVGSHFRPEFINRVDDVVVFHPLGREQIRAITDIQLRLLRQRLAERDIAFEVSE 797
Query: 669 AALKKISNIGFDLIYGAR 686
AAL ++ GFD +YGAR
Sbjct: 798 AALDRLGEAGFDPVYGAR 815
>gi|380513637|ref|ZP_09857044.1| ATP-dependent clp protease subunit protein [Xanthomonas sacchari
NCPPB 4393]
Length = 861
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/681 (60%), Positives = 555/681 (81%), Gaps = 12/681 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR +QVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I KLE ++++L+++WK EK ++ + +IKE+IE+ R+++ A R+ D+ +S+++YG
Sbjct: 445 ESDIAKLEREFSDLDEVWKSEKAALQGATKIKEQIEQARVELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L LE+ L ++ + + F L++ +V +EEIAE+VSR TGIPV+K+++ ER+K
Sbjct: 505 LLPNLEKQLAAANEAE------QHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDELHQRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE
Sbjct: 619 AEFLFDSSDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--- 607
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ GD
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SGDGSAEAY 737
Query: 608 --IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL+ L+ +L + + ++
Sbjct: 738 TQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLHGLEKRLAERGLKIE 797
Query: 666 ISKAALKKISNIGFDLIYGAR 686
+ AL+ + N+GFD +YGAR
Sbjct: 798 LGDRALELLGNVGFDPVYGAR 818
>gi|381172820|ref|ZP_09881938.1| ATP-dependent chaperone ClpB [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380686745|emb|CCG38425.1| ATP-dependent chaperone ClpB [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 859
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/682 (61%), Positives = 551/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 143 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 263 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 323 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 383 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK +++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 443 ESDIDKLEREFSDLNEVWKSEKAVLQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 503 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 554
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 555 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 614
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 615 ALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 674
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 675 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 734
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 735 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 794
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + ++GFD +YGAR
Sbjct: 795 DLDDAALEVLGSVGFDPVYGAR 816
>gi|422649153|ref|ZP_16712263.1| clpB protein [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330962677|gb|EGH62937.1| clpB protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 854
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/677 (62%), Positives = 547/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDDAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE +YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQDEIVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL KRV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHKRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + L +S
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLTERELTLVLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|110833340|ref|YP_692199.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
borkumensis SK2]
gi|110646451|emb|CAL15927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
borkumensis SK2]
Length = 865
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/666 (61%), Positives = 546/666 (81%), Gaps = 9/666 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L KYT++LTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LDKYTVNLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L E++ + II+FIDEL
Sbjct: 221 QRIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERLKAVLNELAKQEGRIILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+RYI+DR +PDKAIDLIDEA ++
Sbjct: 341 PTVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHRYITDRQLPDKAIDLIDEAGSR 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDS PE MD+L+RRLIQLK+E EA+++E D++S+KRL ++ EI++LE +YA+LE+
Sbjct: 401 IRMEIDSMPEEMDRLDRRLIQLKMEREALRKEDDDASRKRLEKLEDEIDELEKEYADLEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IW+ EK ++ + + K E+E+ R+++ +A R D +S+L+YGE+ +LE+ +++ ++
Sbjct: 461 IWQAEKAALQGAAEYKAELEQARVELEQARRAGDLSRMSELQYGEIPELEKKVQDAQDRE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
Q LL+ KV EEIAE+V++ TGIPVSK+++ E++KLL +E+ L RVVGQ+
Sbjct: 521 EQAQTETQ---LLRNKVTDEEIAEVVAKWTGIPVSKMLEGEKDKLLRMEDALHDRVVGQN 577
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+++RIDM
Sbjct: 578 EAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALANFLFDTEEAMVRIDM 637
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE+VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 638 SEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKPYSVVLLDEVEKAHPDVFNILLQVL 697
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK------EIIKLAVMNEVKIYF 620
DDGRLTD +GRT++FRNT++VMTSNLGSD I+++ D E +K AVM V +F
Sbjct: 698 DDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGSDAESASDYETMKSAVMEVVGNHF 757
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEF+NR+D+ +VF L + + IA+IQL L+ +L + M L++S AAL ++ + GFD
Sbjct: 758 RPEFLNRVDETVVFHPLAKDQLKGIASIQLGFLRKRLAEREMSLELSDAALDQLVDAGFD 817
Query: 681 LIYGAR 686
+YGAR
Sbjct: 818 PVYGAR 823
>gi|359781834|ref|ZP_09285057.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
psychrotolerans L19]
gi|359370204|gb|EHK70772.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
psychrotolerans L19]
Length = 854
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/660 (62%), Positives = 545/660 (82%), Gaps = 7/660 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L K+T+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LDKFTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E++ + II+FIDEL
Sbjct: 221 QRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKGVLNELAKQEGRIILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASR 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDSKPE +D+L+RRLIQLK+E +A+K+E DE+++KRL + ++I +LE +YA+LE+
Sbjct: 401 IRMEIDSKPEALDRLDRRLIQLKVERQALKKEEDEAARKRLEKLDEDIARLEQEYADLEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+WK EK ++DS Q+++ IE+ R ++ A RK D +++L+YG + LER L+ Q
Sbjct: 461 VWKAEKAEVQDSAQLQQRIEQARTELEAARRKGDLNRMAELQYGTIPDLERSLQMVDQH- 519
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ P N LL+ KV +EIAE+VS+ TGIPVSK+++ ER+KLL +E L RV+GQD
Sbjct: 520 -EKPAN----QLLRNKVTEDEIAEVVSKWTGIPVSKMLEGERDKLLRMEEALHNRVIGQD 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+ +F+ E++++RIDM
Sbjct: 575 EAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKSLAEFLFDTEDAMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFIN 626
DDGRLTD++GRT++FRN +IVMTSNLGS +I+E+ GD + + AVM+ V +FRPEFIN
Sbjct: 695 DDGRLTDSQGRTVDFRNAVIVMTSNLGSAQIQEL-VGDPDAQRAAVMDAVASHFRPEFIN 753
Query: 627 RIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
RID+++VF L R+ I IA IQL L+ +L + ++ L++S AL K+ +G+D +YGAR
Sbjct: 754 RIDEVVVFEPLGREQIAGIAEIQLQHLRQRLAERDLQLELSPEALDKLVAVGYDPVYGAR 813
>gi|78048880|ref|YP_365055.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037310|emb|CAJ25055.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 861
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/682 (61%), Positives = 550/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 445 ESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 505 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 557 DKLLRMEDDLHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 617 ALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 736
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 737 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 796
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + N+GFD +YGAR
Sbjct: 797 DLDDAALEVLGNVGFDPVYGAR 818
>gi|170728049|ref|YP_001762075.1| ATP-dependent chaperone ClpB [Shewanella woodyi ATCC 51908]
gi|169813396|gb|ACA87980.1| ATP-dependent chaperone ClpB [Shewanella woodyi ATCC 51908]
Length = 857
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/712 (59%), Positives = 559/712 (78%), Gaps = 15/712 (2%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
GKNI E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLI
Sbjct: 146 GKNIDDPNAEDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRIINGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E
Sbjct: 206 GEPGVGKTAIVEGLAQRIINGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
+S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEK
Sbjct: 266 LSQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+LVEEP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ +S RY+SDR
Sbjct: 326 DAALERRFQKVLVEEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASMSNRYVSDRK 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I+I+IDSKPE +DKLERR IQLK+E +A+ +E DE+S +RLL I+
Sbjct: 386 LPDKAIDLIDEAASSIRIQIDSKPEPLDKLERRAIQLKLEEQALTKEADEASLRRLLTIR 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
KE+ ++E+K + L ++W+ EK + +Q IK ++E+ RL ++ A R SD +S+L+YG
Sbjct: 446 KELREVEVKASELNEVWRTEKAALAGTQHIKSDLEQARLDLDVARRASDLTRMSELQYGR 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ +LE+ L SQ ++Q + TLL+ KV EIAE++SR TGIPVSK+++ EREKL
Sbjct: 506 IPELEKQLDLASQAEMQ------EMTLLRNKVTDVEIAEVLSRATGIPVSKMLEGEREKL 559
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L++E+ L +V+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L+
Sbjct: 560 LHMEDALHTQVIGQNEAVDAVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELCKSLA 619
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+
Sbjct: 620 KFLFDTESALVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEV 679
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKL 610
EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + +K
Sbjct: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQERFSTLSYDEMKS 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VMN V FRPEF+NR+D+ +VF L K+I IA+IQ+ L +L + + +L IS A
Sbjct: 740 EVMNVVVHSFRPEFLNRVDETVVFHPLGEKHIEHIASIQIESLMRRLAEKDYELDISDDA 799
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 722
L I+ GFD +YGAR + K++L + ++P A I G L+ P
Sbjct: 800 LSFIARAGFDPVYGARPL---KRAL-----QQEVENPLAQKILSGSLVPGKP 843
>gi|289209193|ref|YP_003461259.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sp. K90mix]
gi|288944824|gb|ADC72523.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sp. K90mix]
Length = 862
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/712 (61%), Positives = 566/712 (79%), Gaps = 11/712 (1%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
++ G N + D EE L+KYT DLTE+A GKLDPVIGRD+EIRR+IQVLQRR+KNN
Sbjct: 142 DIRGGNQVDNPDAEESRQALEKYTTDLTERAEQGKLDPVIGRDEEIRRSIQVLQRRTKNN 201
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ LLAG KYRG+FE+RLK
Sbjct: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKDKRVLALDLGALLAGAKYRGDFEERLKS 261
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+LKE+S + +I+FIDE+HT++G GK EG++DAGNMLKP L+RGELHCIGATTL+EYRQ
Sbjct: 262 VLKELSQEEGRVILFIDEIHTLVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQ 321
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHG+EITDPAIVAA++LS RYI
Sbjct: 322 NIEKDAALERRFQKVLVDEPTLEDTIAILRGLKERYEVHHGIEITDPAIVAAAQLSQRYI 381
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+EIDSKPE MD+LERRLIQLKIE EA+K+E D++SKKRL
Sbjct: 382 TDRQLPDKAIDLIDEAASRIKMEIDSKPESMDRLERRLIQLKIEREALKKESDDASKKRL 441
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
+++EI +LE +Y++LE++WK EK + + Q+KEE+E+ R+++ A R D +S+L
Sbjct: 442 DTLQEEIERLEREYSDLEEVWKSEKASVSGAAQLKEELERARMELETARRAGDLSRMSEL 501
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YG + LE+ L + + Q + LL+TKV EE+AE+VSR TGIPVSK+++ E
Sbjct: 502 QYGRIPDLEKSLAMAHEMESQ------ETKLLRTKVTDEEVAEVVSRWTGIPVSKMLEGE 555
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
++KLL +E + RVVGQ EA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTEL
Sbjct: 556 KDKLLRMEEAIGARVVGQSEAVNAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELT 615
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGYIGYEEGGYLTE VRRKPYS+IL
Sbjct: 616 KALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYIGYEEGGYLTEAVRRKPYSVIL 675
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-E 606
LDE+EKA+ DVFN+LLQ+LDDGRLTD GRT++FRNT+IVMTSNLGS +I+EM + +
Sbjct: 676 LDEVEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSQQIQEMAGEENYD 735
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K AVM V +FRPEFINR+DD++VF L R+ I +IA+IQL L+ +L + ++ + I
Sbjct: 736 AMKAAVMEIVGQHFRPEFINRVDDVVVFHPLEREQIRAIADIQLQYLRKRLEERDLSITI 795
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
+ AAL + GFD +YGAR + K+++ L+ +S A GD I
Sbjct: 796 TDAALDHLGAAGFDPVYGARPL---KRAIQTQLENPLAQSLLAGEFGPGDTI 844
>gi|119476932|ref|ZP_01617213.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2143]
gi|119449739|gb|EAW30976.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2143]
Length = 860
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/677 (62%), Positives = 555/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPAAEENRQALDKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSLDLGSLLAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQY+E
Sbjct: 265 ELSKQEGRIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRQYLE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YE+HHGV+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEIHHGVDITDSAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA ++I++EIDSKPE MD+LERRLIQLKIE EA+K++ D ++KK+L+++
Sbjct: 385 QLPDKAIDLIDEAGSRIRMEIDSKPESMDRLERRLIQLKIEREAVKKDTDSAAKKQLVIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+I K E +YA+LE++W EK++++ SQQ K E+EK R+ + A R D +S+L+YG
Sbjct: 445 DNDILKSEKEYADLEEVWMAEKSILQGSQQTKSELEKARMDLEAAHRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ ++ SQ + + TLL+ KV EE+AE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPGLEKTMETASQAETV------EMTLLRNKVTEEEVAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ EA+ +VSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEESLQKRVIGQSEAVISVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 AMFLFDSEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA+SDVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+++ E+ + E +K
Sbjct: 679 VEKAHSDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQQLSEEKNYEAMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V +FRPEFINRID+ +VF L+++ I IA IQ+++L+++L + L++S A
Sbjct: 739 RSVMEVVGGHFRPEFINRIDETVVFHPLDQQQIRGIAAIQIDLLRSRLRDRELGLELSSA 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+ K++N+GFD +YGAR
Sbjct: 799 AIDKLANVGFDPVYGAR 815
>gi|398948515|ref|ZP_10672836.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM33]
gi|398160568|gb|EJM48835.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM33]
Length = 854
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/676 (61%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|398883912|ref|ZP_10638859.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM60]
gi|398195738|gb|EJM82767.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM60]
Length = 854
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/676 (61%), Positives = 549/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMEGLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|426411549|ref|YP_007031648.1| chaperone ClpB [Pseudomonas sp. UW4]
gi|426269766|gb|AFY21843.1| chaperone ClpB [Pseudomonas sp. UW4]
Length = 854
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/676 (61%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNHEEARQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|121999011|ref|YP_001003798.1| ATPase [Halorhodospira halophila SL1]
gi|121590416|gb|ABM62996.1| ATPase AAA-2 domain protein [Halorhodospira halophila SL1]
Length = 870
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/679 (62%), Positives = 550/679 (81%), Gaps = 9/679 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 146 GGQAVDDPNAEEQRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVL 205
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPG GKTAIVEGLAQRI+N EVP L +K++L LD+ LLAG KYRG+FE+RLK +LK
Sbjct: 206 IGEPGTGKTAIVEGLAQRIVNAEVPEGLKNKRVLSLDLGALLAGAKYRGDFEERLKALLK 265
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+ + II+FIDELHT++G GK EG++DAGNMLKP L+RGELHCIGATTLNEYR+ IE
Sbjct: 266 ELGQQEGQIILFIDELHTIVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEYRENIE 325
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQ +LV+EP +E+T++ILRGL+++YEVHHGVEITDPAIV+A+ LS+RYI+DR
Sbjct: 326 KDAALERRFQTVLVDEPSVEDTVAILRGLKERYEVHHGVEITDPAIVSAATLSHRYITDR 385
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K E D++S+KRL +
Sbjct: 386 NLPDKAIDLVDEAASRIRMEIDSKPESMDRLERRLIQLKIEREALKNENDDASRKRLATL 445
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI++LE +Y +LE+IW EK ++ +Q IKEE+E+ R ++ A R D Q +S+L+YG
Sbjct: 446 EDEISELEQEYQSLEEIWNSEKAAVEGTQSIKEELERARQEVETARRAGDLQRMSELQYG 505
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L +Q D+ LL+ +V EE+AE+VS+ TGIPVSK+++ ER+K
Sbjct: 506 RIPELERQLDMAAQADM------YDMKLLRNRVTEEEVAEVVSKWTGIPVSKMLEGERDK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEAI AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 560 LLRMEEALHERVVGQDEAIGAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 620 AEFLFDTQEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEHVRRKPYSVILLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--- 607
+EKA++DVFN+LLQ+LDDGRLTD+ GRT++FRNT+IVMTSNLGS+ I+ M ++E
Sbjct: 680 VEKAHADVFNVLLQVLDDGRLTDSHGRTVDFRNTVIVMTSNLGSEVIQTMAGEEEESYQR 739
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
+K +VM+ V FRPEFINRID+++VFR L+R+ I +I +IQ+ L +L + +M L++S
Sbjct: 740 MKSSVMDIVGTQFRPEFINRIDEVVVFRPLSREQIRAITSIQVRYLSERLAERDMALELS 799
Query: 668 KAALKKISNIGFDLIYGAR 686
+ AL +I GFD +YGAR
Sbjct: 800 EVALDRIGEAGFDPVYGAR 818
>gi|28897335|ref|NP_796940.1| ClpB protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153839763|ref|ZP_01992430.1| chaperone ClpB [Vibrio parahaemolyticus AQ3810]
gi|260364016|ref|ZP_05776747.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
K5030]
gi|260876298|ref|ZP_05888653.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
AN-5034]
gi|260895105|ref|ZP_05903601.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
Peru-466]
gi|417321417|ref|ZP_12107957.1| ClpB protein [Vibrio parahaemolyticus 10329]
gi|433656841|ref|YP_007274220.1| ClpB protein [Vibrio parahaemolyticus BB22OP]
gi|54035833|sp|Q87S63.1|CLPB_VIBPA RecName: Full=Chaperone protein ClpB
gi|28805544|dbj|BAC58824.1| ClpB protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149746716|gb|EDM57704.1| chaperone ClpB [Vibrio parahaemolyticus AQ3810]
gi|308088902|gb|EFO38597.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
Peru-466]
gi|308092911|gb|EFO42606.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
AN-5034]
gi|308115632|gb|EFO53172.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
K5030]
gi|328472097|gb|EGF42974.1| ClpB protein [Vibrio parahaemolyticus 10329]
gi|432507529|gb|AGB09046.1| ClpB protein [Vibrio parahaemolyticus BB22OP]
Length = 857
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/677 (61%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLQAL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+N+ E +YA LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NDELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L RVVGQ EA++ VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHNRVVGQSEAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+I+VF L +++I SIA+IQL L +L + L++S
Sbjct: 739 SEVMDVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|315635103|ref|ZP_07890381.1| chaperone protein ClpB [Aggregatibacter segnis ATCC 33393]
gi|315476065|gb|EFU66819.1| chaperone protein ClpB [Aggregatibacter segnis ATCC 33393]
Length = 856
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/716 (58%), Positives = 565/716 (78%), Gaps = 14/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+++ E +YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG
Sbjct: 445 EKELSEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + +LL+ +V EEIAE++SR TGIPVSK+++ E+EK
Sbjct: 505 KIPELEKQLAAAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ + +K
Sbjct: 679 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNQEESYDDMKT 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF LN+ NI +IA IQL L N++ L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLNKDNIRAIAEIQLKRLINRMESRGYVLHFTDAT 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L IS IG+D IYGAR + K+++ + ++P A I G L+ + P S+D
Sbjct: 799 LNFISEIGYDPIYGARPL---KRAIQQEI-----ENPLAQQILSGSLLPEKPISVD 846
>gi|398876531|ref|ZP_10631686.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM67]
gi|398204297|gb|EJM91101.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM67]
Length = 854
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/676 (61%), Positives = 549/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E LL +RV+GQDEA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMEGLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|339000201|ref|ZP_08638818.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
TD01]
gi|338762897|gb|EGP17912.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
TD01]
Length = 859
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/683 (61%), Positives = 553/683 (80%), Gaps = 7/683 (1%)
Query: 6 NSLNVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSK 65
NSL G + E+ L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+K
Sbjct: 141 NSLR-GGAKVDDPNAEDQREALNKYTMDLTQRALDGKLDPVIGRDDEIRRTIQVLQRRTK 199
Query: 66 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 125
NNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKEKRVLSLDMGSLLAGAKFRGEFEERL 259
Query: 126 KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 185
K +LKE+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELSQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319
Query: 186 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 245
R+YIEKDAA ERRFQK+LV+EP E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTR 379
Query: 246 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 305
YISDR +PDKAIDLIDEAA++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE++KK
Sbjct: 380 YISDRQLPDKAIDLIDEAASRIRMELDSKPEEMDRLDRRLIQLKMEREALKKETDEATKK 439
Query: 306 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 365
RL + +I++LE +YA+L++IWK EK I+ + Q K E+E+ R+ + +A R+ D +S
Sbjct: 440 RLEALNNQIHELEREYADLDEIWKAEKASIQGAAQFKAELEQARIDLEQARRQGDLGRMS 499
Query: 366 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
+++YG++ LE+ + E + + ++ LL++ V EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGKIPALEKKISEAGEGEADTASH----QLLRSNVTEEEIAEVVSRWTGIPVSKMLE 555
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
ER+KLL +E L +RV+GQ EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLRMEEALHERVIGQHEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 615
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
LCK+L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 603
+LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M +
Sbjct: 676 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDN 735
Query: 604 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
D E++K AVM V +FRPE INRID+++VF L ++ I +IA IQL LK +L + ++
Sbjct: 736 DYEVMKNAVMEVVGNHFRPELINRIDEVVVFHALGQEQIQAIAGIQLERLKVRLAEHDLS 795
Query: 664 LKISKAALKKISNIGFDLIYGAR 686
L IS A+ +++ +GFD +YGAR
Sbjct: 796 LAISDDAMAQLAVVGFDPVYGAR 818
>gi|386817480|ref|ZP_10104698.1| ATP-dependent chaperone ClpB [Thiothrix nivea DSM 5205]
gi|386422056|gb|EIJ35891.1| ATP-dependent chaperone ClpB [Thiothrix nivea DSM 5205]
Length = 870
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/677 (61%), Positives = 558/677 (82%), Gaps = 5/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+KYTIDLTE+A GK+DP+IGRD+EIRR +Q+LQRR+KNNPVL
Sbjct: 146 GGQTVNDPNAEDQRQALEKYTIDLTERAEQGKIDPIIGRDEEIRRMVQILQRRTKNNPVL 205
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTA+VEGLAQRI+NGEVP + K++L LD+ LLAG+KYRG+FE+RLK +L
Sbjct: 206 IGEPGVGKTALVEGLAQRIVNGEVPEGVKGKRLLSLDLGALLAGSKYRGDFEERLKAVLT 265
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I+ ++ ++I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 266 DIAKSEGNVILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 325
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGLQ+KYEVHHGV+ITDPA+VAA+ LS+RYI+DR
Sbjct: 326 KDAALERRFQKVLVDEPSVEDTIAILRGLQEKYEVHHGVDITDPALVAAATLSHRYITDR 385
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE +DKLERRLIQLKIE EA+K+E DE+SKKRL +
Sbjct: 386 QLPDKAIDLIDEAASRIRLEIDSKPEALDKLERRLIQLKIEREALKKESDEASKKRLADL 445
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI++LE+ Y++LE++WK EK ++ + IKE +++ RL+ + A R + Q +++L+YG
Sbjct: 446 QAEIDRLELDYSDLEEVWKGEKAAMQGTTHIKEALDQARLEFDTAKRAGNLQRMAELQYG 505
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + D + N+ + LLK KV EEIA+IVSR TGIPVSK+++ E+EK
Sbjct: 506 KIPELEQQL---AAADAAV-NSQQETKLLKNKVTDEEIADIVSRWTGIPVSKMLESEKEK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRV+GQ EA+ AVSNAIRR+R+GLSD RP GSF+FLGPTGVGKTEL K L
Sbjct: 562 LLQMEDVLGKRVIGQREAVVAVSNAIRRARAGLSDPNRPSGSFLFLGPTGVGKTELTKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 622 AKFLFDTDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS I+EM + E +K
Sbjct: 682 VEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQEMTGEENYERMK 741
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINRID+ +VF L++ I IA+IQLN L+ +L ++ + +++A
Sbjct: 742 AAVMEVVGTHFRPEFINRIDETVVFHPLDQAEIRQIADIQLNNLRKRLAARDLGISVTEA 801
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 802 ALDHIAEAGFDPVYGAR 818
>gi|294666951|ref|ZP_06732180.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603240|gb|EFF46662.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 859
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/682 (61%), Positives = 550/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 143 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 263 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 323 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 383 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 443 ESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 503 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 554
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 555 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 614
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 615 ALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 674
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 675 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 734
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 735 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 794
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + ++GFD +YGAR
Sbjct: 795 DLDDAALEVLGSVGFDPVYGAR 816
>gi|294624966|ref|ZP_06703618.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600729|gb|EFF44814.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 861
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/682 (61%), Positives = 550/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 445 ESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 505 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 557 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 617 ALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 736
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 737 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 796
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + ++GFD +YGAR
Sbjct: 797 DLDDAALEVLGSVGFDPVYGAR 818
>gi|307248109|ref|ZP_07530137.1| hypothetical protein appser2_10900 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306855286|gb|EFM87461.1| hypothetical protein appser2_10900 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 864
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/716 (58%), Positives = 572/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 150 GGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 209
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 210 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 269
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 270 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 329
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 330 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 389
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 390 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 449
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 450 DEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 509
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 510 KIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEK 565
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 566 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 625
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 626 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 685
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K
Sbjct: 686 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKE 745
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AA
Sbjct: 746 VVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTNAA 805
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I GFD ++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 806 LDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVVD 853
>gi|329122865|ref|ZP_08251437.1| chaperone protein ClpB [Haemophilus aegyptius ATCC 11116]
gi|327472129|gb|EGF17567.1| chaperone protein ClpB [Haemophilus aegyptius ATCC 11116]
Length = 856
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 547/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKEESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|406597401|ref|YP_006748531.1| ClpB protein [Alteromonas macleodii ATCC 27126]
gi|407684414|ref|YP_006799588.1| ClpB protein [Alteromonas macleodii str. 'English Channel 673']
gi|407688343|ref|YP_006803516.1| ClpB protein [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|406374722|gb|AFS37977.1| ClpB protein [Alteromonas macleodii ATCC 27126]
gi|407246025|gb|AFT75211.1| ClpB protein [Alteromonas macleodii str. 'English Channel 673']
gi|407291723|gb|AFT96035.1| ClpB protein [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 858
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/715 (59%), Positives = 567/715 (79%), Gaps = 18/715 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+KYT DLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 145 GGQKVTDPNAEDVRQALEKYTTDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLALDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE MD+LERR+IQLK+E +A+ +E D++S KRL +I
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPEEMDRLERRIIQLKLEEQALAKETDDASHKRLEMI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E + E KYA LEK+W EK ++ +Q IK E+E+ +L + A R SD +S+L+YG
Sbjct: 445 ELEREQAETKYAELEKVWLDEKDAMQGTQTIKGELEQAKLDLEIARRASDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE L++ ++ N + TLLK KV EIA+++SR TGIPV+++++ EREK
Sbjct: 505 RIPELEAKLEQAAE------NETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRVVGQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDVLHKRVVGQEEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+++MTSNLGSD I++ + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQDKHNESQYDDMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM+ V +FRPEFINR+DDI+VF L ++ I SIA IQL L+ +L + L +S A
Sbjct: 739 ASVMSVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLASLRARLAEKGYKLTLSAA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 724
A+ K+++ GFD ++GAR + K+++ ++ ++P A+ + G+LI P+S
Sbjct: 799 AMDKLADAGFDPVFGARPL---KRAI-----QVQVENPLAHQLLAGELI---PES 842
>gi|407804423|ref|ZP_11151246.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
sp. W11-5]
gi|407021612|gb|EKE33377.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
sp. W11-5]
Length = 859
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/711 (58%), Positives = 561/711 (78%), Gaps = 19/711 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ E+ L KYT+DLT +A GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 145 GGESVDDPNAEDKREALDKYTVDLTSRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLALDMAALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKQEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDGAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA ++I++EIDS PE MD+L+R+LIQLK+E EA+++E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAGSRIRMEIDSMPEEMDRLDRKLIQLKMEREALRKEEDEASRKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I + E +YA+L +IW EK ++ Q++K ++EK R+++++A R D +S+L+YG
Sbjct: 445 EEDIARFEKEYADLREIWDAEKATLQGEQEVKADLEKARVEMDQARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
E+ LE+ L+E ++ Q + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 EIPALEKKLEEAKNREQQ------ETQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRVVGQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEDALHKRVVGQDEAVQAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 AEFLFDTTDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGSD I+ + + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRLAGEEHYDAMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+D+++VF L + I IA+IQL+ L+ +L + +M L ++
Sbjct: 739 AAVMEVVGQHFRPEFINRVDEVVVFHPLEKGQIRGIADIQLDALRKRLAERDMRLVLTDT 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKK--SPEANFIFLGDLI 718
AL ++ + GFD +YGAR L + I +K +P A I GD +
Sbjct: 799 ALDQLVDAGFDPVYGARP----------LKRAIQQKVENPLATAILRGDFL 839
>gi|418516808|ref|ZP_13082978.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410706405|gb|EKQ64865.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 861
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/682 (61%), Positives = 550/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 445 ESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 505 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 557 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 617 ALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 736
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 737 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 796
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + ++GFD +YGAR
Sbjct: 797 DLDDAALEVLGSVGFDPVYGAR 818
>gi|417843784|ref|ZP_12489850.1| Chaperone protein ClpB [Haemophilus haemolyticus M21127]
gi|341948532|gb|EGT75158.1| Chaperone protein ClpB [Haemophilus haemolyticus M21127]
Length = 856
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELADKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPTLEKQLEQAE------TGEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKEESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IANIQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIANIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|389808749|ref|ZP_10204912.1| ATP-dependent chaperone ClpB [Rhodanobacter thiooxydans LCS2]
gi|388442473|gb|EIL98665.1| ATP-dependent chaperone ClpB [Rhodanobacter thiooxydans LCS2]
Length = 865
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/684 (60%), Positives = 548/684 (80%), Gaps = 14/684 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KY IDLTE+A KLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVQSENAEEQRQALQKYCIDLTERAERNKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRII GEVP L +++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKNEGQIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D SK+RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I KLE ++++L +IWK EK ++ + ++KE+IE+ +++ A R+ D+ +S+++YG
Sbjct: 445 ETDIGKLEREFSDLNEIWKSEKAALQGTTRVKEQIEQAHQELDAAQRQQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L + Q F L++TKV +EEIAE+VSR TGIPVSK+++ ER+K
Sbjct: 505 KLPALEKQLAAAQAAETQ------DFKLVQTKVTAEEIAEVVSRWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E+ L KRVVGQDEA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLHMEDELHKRVVGQDEAVHAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFMFDTTDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS----DKIKEMEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS D+++ D E
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDEVESNGSDDAE 738
Query: 607 I----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 662
+K +V+ V+ +FRPEFINR+D+I+VFR L++ I +IA IQL L+ +L + +
Sbjct: 739 AQYTRMKASVLGVVQAHFRPEFINRLDEIVVFRPLDKTQIRAIAKIQLAYLEKRLAERQL 798
Query: 663 DLKISKAALKKISNIGFDLIYGAR 686
+ +S AL + N+GFD +YGAR
Sbjct: 799 KMDVSDDALALLGNVGFDPVYGAR 822
>gi|433677810|ref|ZP_20509745.1| ATP-dependent Clp protease subunit [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430817074|emb|CCP40175.1| ATP-dependent Clp protease subunit [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 861
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/680 (60%), Positives = 551/680 (81%), Gaps = 10/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ E+ L+KYT DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSESAEDQRQALEKYTTDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRGRRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP LSRGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKTEGQVILFIDELHTMVGAGKADGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KL+ ++++L+++W+ EK ++ + +IKE+IE+ R+++ A R+ D+ +S+++YG
Sbjct: 445 ESDIDKLQREFSDLDEVWRSEKATLQGATRIKEQIEQARVELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L LE+ L + + FTL++ +V +EEIAE+VSR TGIPV+++++ ER+K
Sbjct: 505 LLPNLEKQLAAAGDAE------HHDFTLVQDRVTAEEIAEVVSRWTGIPVNRMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQ EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDELHRRVVGQQEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE
Sbjct: 619 AEFLFDSSEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI-- 607
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYT 738
Query: 608 -IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L +L + + +++
Sbjct: 739 QMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLGGLDKRLAERGLKIEL 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AL+ + N+GFD +YGAR
Sbjct: 799 SDRALELLGNVGFDPVYGAR 818
>gi|350563575|ref|ZP_08932396.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium aerophilum AL3]
gi|349778710|gb|EGZ33061.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium aerophilum AL3]
Length = 855
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/677 (62%), Positives = 546/677 (80%), Gaps = 2/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E L+KYTIDLT +A GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 139 GGESVQDQNAESTRQALEKYTIDLTARAESGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 198
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ LLAG KYRGEFE+RLK +LK
Sbjct: 199 IGEPGVGKTAIVEGLAQRIINGEVPEGLRHKRVLSLDLGSLLAGAKYRGEFEERLKAVLK 258
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ +I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEYR IE
Sbjct: 259 DLSKNEGQVILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEYRDNIE 318
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITDPAIVAA+ LS RYI+DR
Sbjct: 319 KDAALERRFQKVLVDEPTEEDTIAILRGLKERYEVHHGVAITDPAIVAAARLSQRYITDR 378
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MDKL+RRLIQLK+E A+K+E D++SKKRL ++
Sbjct: 379 QLPDKAIDLIDEAASRIRMEIDSKPEEMDKLDRRLIQLKMEQVALKKEKDDASKKRLAIL 438
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
K +I LE +Y++ E++WK +K ++ +QQ KE ++K R ++ A R+ + +S+L+YG
Sbjct: 439 KDQIKDLEKQYSDFEEVWKKDKAALQGAQQYKEALDKARTEMEAARREGNLGRMSELQYG 498
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE +K + +I N + LL+ KV EEIAE+VSR TGIPVS++++ ER+K
Sbjct: 499 VIPDLEAKIKAADELEI-TDENKGEMHLLRNKVSEEEIAEVVSRWTGIPVSRMMEGERDK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +VVGQDEA+ AVS+AIRRSR+GLSD +P GSF+FLGPTGVGKTEL K+L
Sbjct: 558 LLRMEDSLSAKVVGQDEAVKAVSDAIRRSRAGLSDPNKPNGSFLFLGPTGVGKTELTKSL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 618 ADFLFDSQDAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+E+ +G+ + +K
Sbjct: 678 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQIIQELAGEGNYDAMK 737
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEF+NRIDDI+VF L + I +I +IQL L+ +L +++ + +S
Sbjct: 738 SAVMEVVGGHFRPEFVNRIDDIVVFHPLGKGQIRAITDIQLESLRKRLADIDLKIDVSIP 797
Query: 670 ALKKISNIGFDLIYGAR 686
AL I GFD +YGAR
Sbjct: 798 ALDVIGEAGFDPVYGAR 814
>gi|68249453|ref|YP_248565.1| ClpB [Haemophilus influenzae 86-028NP]
gi|386266414|ref|YP_005829906.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
R2846]
gi|68057652|gb|AAX87905.1| ClpB [Haemophilus influenzae 86-028NP]
gi|309973650|gb|ADO96851.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
R2846]
Length = 856
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 547/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|307543921|ref|YP_003896400.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas
elongata DSM 2581]
gi|307215945|emb|CBV41215.1| K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
[Halomonas elongata DSM 2581]
Length = 859
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/677 (60%), Positives = 555/677 (81%), Gaps = 5/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + EE L KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGAKVDDPNAEEQREALDKYTLDLTERASSGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI++GEVP L K++L LD+ LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVDGEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 265 ELAEEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQHIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTEEDTVAILRGLKERYEVHHGVDITDGAIIAAAKLSTRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA+++I++E+DSKPE MD+L+RRLIQLK+E E +K+E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEASSRIRMELDSKPEEMDRLDRRLIQLKMEREHLKKETDEASRKRLESL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I++LE +YA+L++IWK EK I+ + Q K+E+++ R+ + +A R+ D +S+L+YG
Sbjct: 445 EEQISELEREYADLDEIWKAEKASIQGAAQFKDELDRARIDLEQARRQGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER + E S+++ + ++ LL++ V EEIAE+VSR TGIPVSK+++ ER+K
Sbjct: 505 VIPELERKIAESSEEEA----DTSEHRLLRSNVTEEEIAEVVSRWTGIPVSKMLEGERDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA++AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 561 LLRMEEALHERVIGQDEAVNAVSNAVRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKSL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 621 AWFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA++DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+ M D +K
Sbjct: 681 VEKAHADVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQRMGSDEDYTQMK 740
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPE INRID+++VF L ++ I +IA+IQL L+++L + ++ ++S
Sbjct: 741 SMVMEVVGNHFRPELINRIDEVVVFHALEQEQIRAIADIQLERLRDRLAEHDLSFEVSDE 800
Query: 670 ALKKISNIGFDLIYGAR 686
A+ +++ GFD ++GAR
Sbjct: 801 AMAQLAAAGFDPVFGAR 817
>gi|165976510|ref|YP_001652103.1| ATP-dependent Clp protease subunit B [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|307261568|ref|ZP_07543236.1| hypothetical protein appser12_11290 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|165876611|gb|ABY69659.1| ATP-dependant Clp protease chain B [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306868691|gb|EFN00500.1| hypothetical protein appser12_11290 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 857
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/716 (58%), Positives = 572/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AA
Sbjct: 739 VVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I GFD ++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 799 LDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVVD 846
>gi|303250165|ref|ZP_07336367.1| hypothetical protein APP6_1581 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252723|ref|ZP_07534614.1| hypothetical protein appser6_12370 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651228|gb|EFL81382.1| hypothetical protein APP6_1581 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859755|gb|EFM91777.1| hypothetical protein appser6_12370 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 857
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/716 (58%), Positives = 572/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AA
Sbjct: 739 VVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I GFD ++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 799 LDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVVD 846
>gi|326796211|ref|YP_004314031.1| ATP-dependent chaperone ClpB [Marinomonas mediterranea MMB-1]
gi|326546975|gb|ADZ92195.1| ATP-dependent chaperone ClpB [Marinomonas mediterranea MMB-1]
Length = 861
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/672 (61%), Positives = 551/672 (81%), Gaps = 15/672 (2%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLTE+A G+LDPVIGRDDEIRR +QVLQRR KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTERAAEGRLDPVIGRDDEIRRTVQVLQRRRKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
IVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + II
Sbjct: 215 IVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDEIHTMVGAGKSEGSMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP + ++I+ILRGL+++YEVHHGV+ITDPAI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPTVLDSIAILRGLKERYEVHHGVDITDPAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D SSK+RL ++ EI +L+ +
Sbjct: 395 DEAASRIRMEMDSKPENLDRLERRLIQLKIEKEALKKETDRSSKQRLKELESEIERLQKE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLE---- 376
Y++LE+IW EK ++ +Q++KEE+E+V+ ++ +A R+ + +S+L+YG + LE
Sbjct: 455 YSDLEEIWNAEKAQVQGAQKLKEELEQVKQEMEEARRQGNLAKMSELQYGVIPMLEAEIE 514
Query: 377 -RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIE 435
L E+ +++ Q LLK +V EEIA +VSR TGIPV K+++ EREKLL +E
Sbjct: 515 KATLAEEGEQETQ---------LLKNRVTEEEIATVVSRWTGIPVDKMLEGEREKLLRME 565
Query: 436 NLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIF 495
++L + V+GQDEA++AVSNA+RRSRSGL+D KRP GSF+FLGPTGVGKTELCK+L+ +F
Sbjct: 566 DVLHESVIGQDEAVNAVSNAVRRSRSGLADPKRPNGSFLFLGPTGVGKTELCKSLAKFLF 625
Query: 496 NNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKAN 555
+ E++++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDEIEKA+
Sbjct: 626 DTEQAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEIEKAH 685
Query: 556 SDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMN 614
DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGSD I+E + D+ E IK V++
Sbjct: 686 PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQEYQTDDQYEEIKSKVLD 745
Query: 615 EVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKI 674
V FRPEFINRID+ +VF L ++ I IA IQL+ L +L +M M L +S +A+ ++
Sbjct: 746 VVGTQFRPEFINRIDETVVFHPLRKEQIAGIAKIQLSHLNERLEEMGMALTLSDSAMSQL 805
Query: 675 SNIGFDLIYGAR 686
+ +G+D +YGAR
Sbjct: 806 AEVGYDPVYGAR 817
>gi|386719694|ref|YP_006186020.1| clpB protein [Stenotrophomonas maltophilia D457]
gi|384079256|emb|CCH13854.1| ClpB protein [Stenotrophomonas maltophilia D457]
Length = 861
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/716 (59%), Positives = 564/716 (78%), Gaps = 24/716 (3%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+ LE ++++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG
Sbjct: 445 ENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMSEIQYG 504
Query: 371 ELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ L +E KD F L++ +V EEIAE+VSR TGIPV+K+++ E
Sbjct: 505 LLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGE 555
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E +L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 556 RDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELC 615
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K+L+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLIL
Sbjct: 616 KSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLIL 675
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE- 606
LDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D
Sbjct: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPE 735
Query: 607 ---IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + +
Sbjct: 736 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLK 795
Query: 664 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
L +S AA + N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 796 LAVSDAAFDLLGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQQILSGAFVN 843
>gi|325924771|ref|ZP_08186207.1| ATP-dependent chaperone ClpB [Xanthomonas perforans 91-118]
gi|325544787|gb|EGD16134.1| ATP-dependent chaperone ClpB [Xanthomonas perforans 91-118]
Length = 861
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/682 (61%), Positives = 549/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELH M+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKNEGQIILFIDELHIMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 445 ESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 505 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 557 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 617 ALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 736
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 737 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 796
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + N+GFD +YGAR
Sbjct: 797 DLDDAALEVLGNVGFDPVYGAR 818
>gi|254427099|ref|ZP_05040806.1| ATPase, AAA family [Alcanivorax sp. DG881]
gi|196193268|gb|EDX88227.1| ATPase, AAA family [Alcanivorax sp. DG881]
Length = 863
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/666 (61%), Positives = 544/666 (81%), Gaps = 9/666 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L KYT++LTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 159 LDKYTVNLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L E+ + II+FIDEL
Sbjct: 219 QRIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERLKAVLNELGKQEGRIILFIDEL 278
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 279 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 338
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+RYI+DR +PDKAIDLIDEA ++
Sbjct: 339 PTVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHRYITDRQLPDKAIDLIDEAGSR 398
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDS PE MD+L+RRLIQLK+E EA+++E D++S+KRL +++EI++LE +YA+LE+
Sbjct: 399 IRMEIDSMPEEMDRLDRRLIQLKMEREALRKEEDDASRKRLEKLEEEIDELEKQYADLEE 458
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IW+ EK ++ + + K E+E+ R+++ +A R D +S+L+YG++ +LE+ +++ ++
Sbjct: 459 IWQAEKAALQGAAEYKAELEQARVEMEQARRAGDLSRMSELQYGQIPELEKKVQDAQDRE 518
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
Q LL+ KV EEIAE+V++ TGIPVSK+++ E++KLL +E L RVVGQD
Sbjct: 519 EQAQAETQ---LLRNKVTDEEIAEVVAKWTGIPVSKMLEGEKDKLLRMEEALHDRVVGQD 575
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+++RIDM
Sbjct: 576 EAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALANFLFDTEEAMVRIDM 635
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE+VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 636 SEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKPYSVVLLDEVEKAHPDVFNILLQVL 695
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK------EIIKLAVMNEVKIYF 620
DDGRLTD +GRT++FRNT++VMTSNLGSD I+++ D E +K AVM V +F
Sbjct: 696 DDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGADAQSGSDYEAMKSAVMEVVGSHF 755
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINR+D+ +VF L + + IA+IQL L+ +L + ++ L +S AL K+ + GFD
Sbjct: 756 RPEFINRVDETVVFHPLAKDQLKGIASIQLGFLQKRLAERDIGLALSNEALDKLVDAGFD 815
Query: 681 LIYGAR 686
+YGAR
Sbjct: 816 PVYGAR 821
>gi|303253337|ref|ZP_07339486.1| hypothetical protein APP2_0648 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302648019|gb|EFL78226.1| hypothetical protein APP2_0648 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 857
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/716 (58%), Positives = 572/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AA
Sbjct: 739 VVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTNAA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I GFD ++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 799 LDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVVD 846
>gi|389796255|ref|ZP_10199311.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 116-2]
gi|388448895|gb|EIM04875.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 116-2]
Length = 863
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/682 (60%), Positives = 550/682 (80%), Gaps = 12/682 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KY IDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVQSENAEEQRHALEKYCIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRII GEVP L +++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP++E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPNVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D SK+RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I KLE ++++L +IWK EK ++ + ++KE+IE+ R +++ A R+ D+ +S+++YG
Sbjct: 445 ETDIGKLEREFSDLNEIWKSEKAALQGTTKVKEQIEQARQELDAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L + Q F L++T+V +EEIAE+VSR TGIPV+K+++ ER+K
Sbjct: 505 KLPELEKQLAAAQAAETQ------DFRLVQTRVTAEEIAEVVSRWTGIPVNKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E+ L +RVVGQDEA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLHMEDALHQRVVGQDEAVHAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFMFDTTDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKE-- 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++ + GD E
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDAAESNGDAEEQ 738
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K +V+ V+ +FRPEFINR+D+I+VFR L++ I +IA IQL L+ +L + + L
Sbjct: 739 YTQMKASVLGVVQAHFRPEFINRLDEIVVFRPLDKSQIRAIAKIQLEYLEKRLAERQLKL 798
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AL + N+GFD +YGAR
Sbjct: 799 DVGDDALALLGNVGFDPVYGAR 820
>gi|342903657|ref|ZP_08725465.1| Chaperone protein ClpB [Haemophilus haemolyticus M21621]
gi|341954908|gb|EGT81377.1| Chaperone protein ClpB [Haemophilus haemolyticus M21621]
Length = 856
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELADKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|145629931|ref|ZP_01785713.1| hypothetical protein CGSHi22421_07768 [Haemophilus influenzae
R3021]
gi|229844737|ref|ZP_04464876.1| ClpB [Haemophilus influenzae 6P18H1]
gi|144984212|gb|EDJ91635.1| hypothetical protein CGSHi22421_07768 [Haemophilus influenzae
R3021]
gi|229812451|gb|EEP48141.1| ClpB [Haemophilus influenzae 6P18H1]
Length = 856
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 547/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPDLEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|145632228|ref|ZP_01787963.1| DNA polymerase I [Haemophilus influenzae 3655]
gi|145634718|ref|ZP_01790426.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
PittAA]
gi|260579950|ref|ZP_05847780.1| ATP-dependent chaperone ClpB [Haemophilus influenzae RdAW]
gi|144987135|gb|EDJ93665.1| DNA polymerase I [Haemophilus influenzae 3655]
gi|145267884|gb|EDK07880.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
PittAA]
gi|260093234|gb|EEW77167.1| ATP-dependent chaperone ClpB [Haemophilus influenzae RdAW]
Length = 856
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 547/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPDLEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|352080093|ref|ZP_08951162.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 2APBS1]
gi|351684802|gb|EHA67871.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 2APBS1]
Length = 863
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/682 (60%), Positives = 549/682 (80%), Gaps = 12/682 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KY IDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVQSENAEEQRQALEKYCIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRII GEVP L +++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D SK+RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I KLE ++++L +IWK EK ++ + ++KE+IE+ R +++ A R+ D+ +S+++YG
Sbjct: 445 ETDIGKLEREFSDLNEIWKSEKAALQGTTKVKEQIEQARQELDAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L + Q F L++T+V +EEIAE+VSR TGIPV+K+++ ER+K
Sbjct: 505 KLPELEKQLAAAQAAETQ------GFRLVQTRVTAEEIAEVVSRWTGIPVNKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E+ L +RVVGQDEA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLHMEDALHQRVVGQDEAVHAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFMFDTTDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKE-- 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++ + GD E
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDAAESNGDAEEQ 738
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K +V+ V+ +FRPEFINR+D+I+VFR L++ I +IA IQL L+ +L + + L
Sbjct: 739 YTQMKASVLGVVQAHFRPEFINRLDEIVVFRPLDKSQIRAIAKIQLEYLEKRLAERQLKL 798
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AL + N+GFD +YGAR
Sbjct: 799 DVGDDALALLGNVGFDPVYGAR 820
>gi|381157534|ref|ZP_09866768.1| ATP-dependent chaperone ClpB [Thiorhodovibrio sp. 970]
gi|380881397|gb|EIC23487.1| ATP-dependent chaperone ClpB [Thiorhodovibrio sp. 970]
Length = 867
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/678 (62%), Positives = 543/678 (80%), Gaps = 7/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KY+IDLTE+A GKLDPV+GRDDEIRR IQVL RR+KNNPVL
Sbjct: 145 GGQKVEDPNAEEQRQALEKYSIDLTERAEQGKLDPVVGRDDEIRRTIQVLARRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERLKAVLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+Y+E
Sbjct: 265 DVARQEGNIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E+TI+ILRGL+++YEVHH VEITDPAI+AA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVVEPSVEDTIAILRGLKERYEVHHAVEITDPAIIAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDS PE MDKL+RRLIQLKIE EA+K+E DE+SKKRL +
Sbjct: 385 QLPDKAIDLIDEAASHIRMEIDSMPEEMDKLDRRLIQLKIEREALKKESDEASKKRLDDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI +LE ++++L +IW+ EK ++ + IKEE+++ R+++ A R D +S+L+YG
Sbjct: 445 QGEITRLEREFSDLNEIWQSEKAAVQGTAHIKEELDRARVEMETARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L S D N LL+ KV EEIA+IVS+ T IPVSK+++ EREK
Sbjct: 505 RIPELEKRLTTASASDTDQSGN----KLLRNKVTEEEIADIVSKWTNIPVSKMLEGEREK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQ EA+SAVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 561 LLRMEEALARRVVGQQEAVSAVSDAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EES++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE
Sbjct: 621 AQFLFDTEESLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
IEKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN+ IVMTSNLGSD I++ + G+ +
Sbjct: 681 IEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNSAIVMTSNLGSDIIQQ-KAGEANYGEM 739
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM ++ FRPEFINR+D+I+VF L ++ I +IA IQL L+ +L + ++IS
Sbjct: 740 KDAVMEILRHAFRPEFINRLDEIVVFHPLGQEQIRAIARIQLEYLRARLASREIGMQISD 799
Query: 669 AALKKISNIGFDLIYGAR 686
AAL + GFD +YGAR
Sbjct: 800 AALDHLGEAGFDPVYGAR 817
>gi|438000238|ref|YP_007183971.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451812776|ref|YP_007449229.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339472|gb|AFZ83894.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451778745|gb|AGF49625.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 861
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/679 (62%), Positives = 551/679 (81%), Gaps = 3/679 (0%)
Query: 9 NVNGKNILSQ-QDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G + +S DE + L KYT D+T AR GKLDPVIGRDDEIRR IQ+LQRR+KNN
Sbjct: 141 NIRGSDKISDVNDESNRNALSKYTTDVTSLARQGKLDPVIGRDDEIRRTIQILQRRTKNN 200
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGEPGVGKTAIVEGLAQRIINGEVP++L K++L LD+A L+AG K+RGEFE+RLK
Sbjct: 201 PVLIGEPGVGKTAIVEGLAQRIINGEVPDNLRDKRVLSLDLASLIAGAKFRGEFEERLKA 260
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+LK+IS + + I+FIDELHT++G GK EGSIDAGNMLKP L+RGELHCIGATTL+EYR+
Sbjct: 261 VLKDISA-ESNSILFIDELHTIMGAGKAEGSIDAGNMLKPALARGELHCIGATTLDEYRR 319
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKDAA ERRFQK++V+EP++E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS RYI
Sbjct: 320 YIEKDAALERRFQKVIVDEPNVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSNRYI 379
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DRF+PDKAIDLIDEA A+I++EIDSKPE MDKLERR+IQLKIE EA+K+E DE SKKRL
Sbjct: 380 TDRFLPDKAIDLIDEAGARIRMEIDSKPEAMDKLERRIIQLKIEREAVKKESDEVSKKRL 439
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
I+ E+NK++ +Y + EKIWK EK +++ ++ IKEEI+ +R K+ + R + +++L
Sbjct: 440 YSIEDELNKIQKEYDDYEKIWKSEKNIVEGTKNIKEEIDSLRAKMAELQRNGQYDRLAEL 499
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+Y +L +LE LK I + KF LL+T+VG+EEIAE+VSR TGIPVSK++Q E
Sbjct: 500 QYSKLPELEERLKSAESYSINQSED-KKFKLLRTQVGAEEIAEVVSRATGIPVSKMMQGE 558
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
REKLL++ N L R++GQ EA++AVS++I R+R+GLSD RP GSF+FLGPTGVGKTEL
Sbjct: 559 REKLLHMSNFLSSRIIGQSEAVNAVSDSILRARAGLSDQSRPSGSFLFLGPTGVGKTELA 618
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++ + +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L
Sbjct: 619 KALADFMFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVL 678
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
LDE+EKA+ DVFN+LLQ+LDDGRLTD+ GRT++FRNTII+MTSNLGS+ I+ M
Sbjct: 679 LDEVEKAHLDVFNVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNLGSNHIQNMMDSTYNE 738
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
I+ +M E+K RPEF+NRID+I+ F L + + SI IQ++ LK++L + N+ + I+
Sbjct: 739 IRDVIMEELKATLRPEFLNRIDEIVFFHSLKLEQMNSIVRIQIDQLKDRLKQKNIYIDIA 798
Query: 668 KAALKKISNIGFDLIYGAR 686
+ A+ ++ GFD+++GAR
Sbjct: 799 EDAILMLAKNGFDVVFGAR 817
>gi|407792049|ref|ZP_11139122.1| clpB protein [Gallaecimonas xiamenensis 3-C-1]
gi|407198214|gb|EKE68253.1| clpB protein [Gallaecimonas xiamenensis 3-C-1]
Length = 857
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/677 (61%), Positives = 553/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L++YTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVEDANAEDTRQALERYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDLGALLAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGQVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYEIHHSVEITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL L+
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLERRMIQLKLERQALTKETDDASKKRLNLL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ L+ +Y L++IW EK + +QQIK ++E+ R ++ A R ++++ +S+L+YG
Sbjct: 445 EEELADLDGRYEELDEIWNTEKAALSGTQQIKAQLEEARQELEIARRAANYERMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L S ++Q + TLLK KV EIAE+VSR TGIPV+K+++ ER+K
Sbjct: 505 RIPELEKQLDLASAAEMQ------EMTLLKHKVSDGEIAEVVSRWTGIPVAKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRVVGQ+EA++AV+NAIRRSR+GLSD +RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLQMEDNLHKRVVGQEEAVTAVANAIRRSRAGLSDPRRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++R+DMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTDDAMVRLDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD++GRT++FRNT+++MTSNLGS +I+E K D E++K
Sbjct: 679 VEKAHPDVFNLLLQVLDDGRLTDSQGRTVDFRNTVVIMTSNLGSARIQEHAGKEDYEVMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+EV +FRPEFINRID+ +VF L+ + I IA IQL LK +L + + L++S
Sbjct: 739 AMVMDEVGHHFRPEFINRIDETVVFHPLSDQVIRQIATIQLAGLKKRLAERDYQLELSDG 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD ++GAR
Sbjct: 799 ALDLLAEAGFDPLFGAR 815
>gi|334143474|ref|YP_004536630.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium cyclicum ALM1]
gi|333964385|gb|AEG31151.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium cyclicum ALM1]
Length = 853
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/677 (62%), Positives = 547/677 (80%), Gaps = 4/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E LKKYTIDLT +A GKLDPVIGRDDEIRRAIQVLQRR+KNNPVL
Sbjct: 139 GGESVQDQNAESTRQALKKYTIDLTSRAESGKLDPVIGRDDEIRRAIQVLQRRTKNNPVL 198
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +LK
Sbjct: 199 IGEPGVGKTAIVEGLAQRIINGEVPEGLRNKRVLSLDLGALLAGAKYRGEFEERLKAVLK 258
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ +I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEYR IE
Sbjct: 259 DLSKNEGQVILFIDEIHTMVGAGKAEGAMDAGNMLKPTLARGELHCIGATTLNEYRDNIE 318
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITDPAIVAA+ LS RYI+DR
Sbjct: 319 KDAALERRFQKVLVDEPTEEDTIAILRGLKERYEVHHGVAITDPAIVAAARLSQRYITDR 378
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MDKL+RRLIQLK+E A+K+E D++SKKRL ++
Sbjct: 379 QLPDKAIDLIDEAASRIRMEIDSKPEEMDKLDRRLIQLKMEQVALKKEKDDASKKRLEIL 438
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
K +I +LE +Y++ E++WK +K ++ +QQ KE ++K R ++ A R+ + +S+L+YG
Sbjct: 439 KDQIKELEKQYSDFEEVWKKDKAALQGAQQYKEALDKARTEMEAARREGNLARMSELQYG 498
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE +K + + + LL+ KV +EIAE+VSR TGIPVS++++ EREK
Sbjct: 499 VIPDLEAKIKAAEASEAE---GDDHMHLLRNKVTEDEIAEVVSRWTGIPVSRMMEGEREK 555
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +VVGQDEA+ AVS+AIRRSR+GLSD +P GSF+FLGPTGVGKTEL K+L
Sbjct: 556 LLRMEESLSAKVVGQDEAVKAVSDAIRRSRAGLSDPNKPNGSFLFLGPTGVGKTELTKSL 615
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 616 ADFLFDSQDAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILLDE 675
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRTI+FRNT+IVMTSNLGS I+E+ + + + +K
Sbjct: 676 VEKAHPDVFNILLQVLDDGRLTDGQGRTIDFRNTVIVMTSNLGSQIIQELAGEANYDAMK 735
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRIDDI+VF L + I +I +IQL L+++L+ +++ L +S
Sbjct: 736 SAVMDVVGGHFRPEFVNRIDDIVVFHPLGKAQIRAITDIQLQRLRDRLVDLDIKLDVSIP 795
Query: 670 ALKKISNIGFDLIYGAR 686
AL + GFD +YGAR
Sbjct: 796 ALDVMGEAGFDPVYGAR 812
>gi|325921790|ref|ZP_08183609.1| ATP-dependent chaperone ClpB [Xanthomonas gardneri ATCC 19865]
gi|325547722|gb|EGD18757.1| ATP-dependent chaperone ClpB [Xanthomonas gardneri ATCC 19865]
Length = 802
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/682 (61%), Positives = 552/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 86 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 145
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 146 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 205
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 206 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 265
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 266 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 325
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL +
Sbjct: 326 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADL 385
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++ +L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG
Sbjct: 386 ETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYG 445
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 446 VLPQLE--------KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 497
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 498 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 557
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 558 ALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 617
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI 607
DE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 618 DEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEA 677
Query: 608 ---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL+ L+ +L + + L
Sbjct: 678 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLHGLEKRLSERGLKL 737
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + N+GFD +YGAR
Sbjct: 738 DLDDAALELLGNVGFDPVYGAR 759
>gi|165918374|ref|ZP_02218460.1| ATP-dependent chaperone ClpB [Coxiella burnetii Q321]
gi|165917880|gb|EDR36484.1| ATP-dependent chaperone ClpB [Coxiella burnetii Q321]
Length = 859
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/727 (60%), Positives = 579/727 (79%), Gaps = 13/727 (1%)
Query: 2 GIKNNSLNVN-GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
I+ N +N+ G+ + Q E+ L KYTIDLTEKA GKLDPVIGRD+EIRR +QVL
Sbjct: 135 AIEKNIMNLRKGERVTEQSAEDQRQALAKYTIDLTEKAETGKLDPVIGRDEEIRRTVQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +LK+I+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLKDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYR+YIEKDAA ERRFQK+LVEEP E+ I+ILRGL+++YEVHHGVEITDPAI+AA+
Sbjct: 315 TLDEYRKYIEKDAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
LS RYI+DR +PDKAIDLIDEAA++I++E+DSKP +D+LERRLIQLKIE EA+K+E D
Sbjct: 375 TLSQRYITDRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLKIEREALKKETD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+SKKRL ++ EI +E +Y++LE++WK EK + +QQIKEE+E+ R+++ A R D
Sbjct: 435 EASKKRLSDLETEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQARIELEAAGRAGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+S+L+YG + +L++ LK SQK+ Q ++ LL+++V EE+AE+VS+ T IPV
Sbjct: 495 LARMSELQYGIIPELDKKLKAASQKEEQFHDH----KLLRSRVTEEEVAEVVSKWTHIPV 550
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL++E L KRV+GQDEA++AV+NAIRRSR+GLSD RP GSF+FLGPTG
Sbjct: 551 SKMLEGEREKLLHMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTG 610
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+A +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR
Sbjct: 611 VGKTELCKALAAFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRR 670
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
+PYS+ILLDEIEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E
Sbjct: 671 RPYSVILLDEIEKAHNDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREF 730
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
+ + +K AVM V +FRPEFINRID+ +VF L ++ I +IA IQ++ +K +L +
Sbjct: 731 SGENYDKMKDAVMEVVAQHFRPEFINRIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEK 790
Query: 661 NMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN 719
+ L IS AL +S +G+D +YGAR + K+ L L+ + +K E F+ G LIN
Sbjct: 791 DYQLTISDDALDYLSELGYDPVYGARPL---KRVLQQQLENPLSQKILEGKFV-PGSLIN 846
Query: 720 ---KGPQ 723
KG Q
Sbjct: 847 IEKKGEQ 853
>gi|154706915|ref|YP_001425322.1| ClpB [Coxiella burnetii Dugway 5J108-111]
gi|154356201|gb|ABS77663.1| ClpB [Coxiella burnetii Dugway 5J108-111]
Length = 859
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/716 (61%), Positives = 573/716 (80%), Gaps = 12/716 (1%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
G+ + Q E+ L KYTIDLTEKA GKLDPVIGRD+EIRR +QVLQRR+KNNPVLI
Sbjct: 146 GERVTEQSAEDQRQALAKYTIDLTEKAETGKLDPVIGRDEEIRRTVQVLQRRTKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +LK+
Sbjct: 206 GEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERLKAVLKD 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
I+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEK
Sbjct: 266 IAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+LVEEP E+ I+ILRGL+++YEVHHGVEITDPAI+AA+ LS RYI+DR
Sbjct: 326 DAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQRYITDRN 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA++I++E+DSKP +D+LERRLIQLKIE EA+K+E DE+SKKRL ++
Sbjct: 386 LPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASKKRLSDLE 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
EI +E +Y++LE++WK EK + +QQIKEE+E+ R+++ A R D +SKL+YG
Sbjct: 446 TEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQARIELEAAGRAGDLARMSKLQYGI 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ +L++ LK SQK+ Q ++ LL+++V EE+AE+VS+ T IPVSK+++ EREKL
Sbjct: 506 IPELDKKLKAASQKEEQFHDH----KLLRSRVTEEEVAEVVSKWTHIPVSKMLEGEREKL 561
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L++E L KRV+GQDEA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+
Sbjct: 562 LHMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTELCKALA 621
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
A +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYS+ILLDEI
Sbjct: 622 AFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEI 681
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLA 611
EKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E + + +K A
Sbjct: 682 EKAHNDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGENYDKMKDA 741
Query: 612 VMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAAL 671
VM V +FRPEFINRID+ +VF L ++ I +IA IQ++ +K +L + + L IS AL
Sbjct: 742 VMEVVAQHFRPEFINRIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLTISDDAL 801
Query: 672 KKISNIGFDLIYGARDVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN---KGPQ 723
+S +G+D +YGAR + K+ L L+ + +K E F+ G LIN KG Q
Sbjct: 802 DYLSGLGYDPVYGARPL---KRVLQQQLENPLSQKILEGKFV-PGSLINIEKKGEQ 853
>gi|261856613|ref|YP_003263896.1| ATP-dependent chaperone ClpB [Halothiobacillus neapolitanus c2]
gi|261837082|gb|ACX96849.1| ATP-dependent chaperone ClpB [Halothiobacillus neapolitanus c2]
Length = 860
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/677 (60%), Positives = 548/677 (80%), Gaps = 5/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ EE L+KY+IDLT +A GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 146 GGESVNDANAEESRQALEKYSIDLTARAEAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 205
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+ LLAG K+RG+FE+RLK +L
Sbjct: 206 IGEPGVGKTAIVEGLAQRIVNGEVPENLKNKRVLSLDMGALLAGAKFRGDFEERLKGVLN 265
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 266 DVAKQEGRVILFIDEIHTMVGAGKSDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIE 325
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+RY++DR
Sbjct: 326 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHRYVTDR 385
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+++++EIDSKPE MD+LERRLIQLKIE A+K+E DE+S KRL +
Sbjct: 386 QLPDKAIDLIDEAASRLRMEIDSKPEEMDRLERRLIQLKIEQVALKKEKDEASLKRLADL 445
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I++L +Y+ LE+IWK EK +++ S ++KE+++ R+ A R D +S+L+YG
Sbjct: 446 EEQIDRLGREYSELEEIWKAEKLMVEGSAKVKEQLDHARIDFETARRAGDLARMSELQYG 505
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L++ + LL+ KVG EEIAE+V+R TGIPV+K+++ E++K
Sbjct: 506 RIPELERQLQQAQSAE----QTETTPRLLRNKVGEEEIAEVVARATGIPVAKMLEGEKDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQDEA+ +V++AIRRSR+GLSD RP GSF+FLGPTGVGKTEL K L
Sbjct: 562 LLRMEEALATRVVGQDEAVKSVADAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELTKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EES++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RRKPYS+ILLDE
Sbjct: 622 ANFLFDTEESMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRKPYSVILLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+EM E D + +K
Sbjct: 682 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHLIQEMAETNDYDAMK 741
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AV+ V +FRPEFINRID+++VF L R+ I I +IQ++ L+ +L + ++ ++++
Sbjct: 742 TAVLEVVGGHFRPEFINRIDEVVVFHPLGREQIRQIVDIQIDFLRKRLAERDLQIELTIQ 801
Query: 670 ALKKISNIGFDLIYGAR 686
AL + GFD +YGAR
Sbjct: 802 ALDLLGEAGFDPVYGAR 818
>gi|190575587|ref|YP_001973432.1| heat shock chaperone ClpB [Stenotrophomonas maltophilia K279a]
gi|190013509|emb|CAQ47144.1| putative heat shock chaperone ClpB [Stenotrophomonas maltophilia
K279a]
Length = 861
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/716 (59%), Positives = 564/716 (78%), Gaps = 24/716 (3%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+ LE ++++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG
Sbjct: 445 ENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMSEIQYG 504
Query: 371 ELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ L +E KD F L++ +V EEIAE+VSR TGIPV+K+++ E
Sbjct: 505 LLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGE 555
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E +L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 556 RDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELC 615
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K+L+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLIL
Sbjct: 616 KSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLIL 675
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE- 606
LDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D
Sbjct: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPE 735
Query: 607 ---IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + +
Sbjct: 736 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLK 795
Query: 664 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
L +S AA + N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 796 LAVSDAAFDLLGNVGFDPVYGARPL---KRAIQSQL-----ENPLAQQILSGAFVN 843
>gi|424669901|ref|ZP_18106926.1| chaperone ClpB [Stenotrophomonas maltophilia Ab55555]
gi|401071972|gb|EJP80483.1| chaperone ClpB [Stenotrophomonas maltophilia Ab55555]
Length = 861
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/716 (59%), Positives = 564/716 (78%), Gaps = 24/716 (3%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+ LE ++++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG
Sbjct: 445 ENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMSEIQYG 504
Query: 371 ELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ L +E KD F L++ +V EEIAE+VSR TGIPV+K+++ E
Sbjct: 505 LLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGE 555
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E +L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 556 RDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELC 615
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K+L+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLIL
Sbjct: 616 KSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLIL 675
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE- 606
LDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D
Sbjct: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPE 735
Query: 607 ---IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + +
Sbjct: 736 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLK 795
Query: 664 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
L +S AA + N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 796 LAVSDAAFDLLGNVGFDPVYGARPL---KRAIQSQL-----ENPLAQQILSGAFVN 843
>gi|407700657|ref|YP_006825444.1| ClpB protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407249804|gb|AFT78989.1| ClpB protein [Alteromonas macleodii str. 'Black Sea 11']
Length = 858
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/715 (58%), Positives = 567/715 (79%), Gaps = 18/715 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+KYT DLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 145 GGQKVTDPNAEDVRQALEKYTTDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLALDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE MD+LERR+IQLK+E +A+ +E D++S KRL +I
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPEEMDRLERRIIQLKLEEQALAKETDDASHKRLEMI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E + E KYA LEK+W EK ++ +Q IK E+E+ +L + A R SD +S+L+YG
Sbjct: 445 ELEREQAETKYAELEKVWLDEKDAMQGTQTIKGELEQAKLDLEIARRASDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE L++ ++ N + TLLK KV EIA+++SR TGIPV+++++ EREK
Sbjct: 505 RIPELEAKLEQAAE------NETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRVVGQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDVLHKRVVGQEEAVQAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+++MTSNLGSD I++ + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQDKHNESQYDDMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM+ V +FRPEFINR+DDI+VF L ++ I SIA IQL L+ +L + L ++ A
Sbjct: 739 ASVMSVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLASLRARLAEKGYKLTLTAA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 724
A+ K+++ GFD ++GAR + K+++ ++ ++P A+ + G+LI P+S
Sbjct: 799 AMDKLADAGFDPVFGARPL---KRAI-----QVQVENPLAHQLLAGELI---PES 842
>gi|408374171|ref|ZP_11171861.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
hongdengensis A-11-3]
gi|407766056|gb|EKF74503.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
hongdengensis A-11-3]
Length = 861
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/713 (59%), Positives = 567/713 (79%), Gaps = 16/713 (2%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L KYT++LTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LDKYTVNLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L E++ + II+FIDEL
Sbjct: 221 QRIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERLKAVLNELAKQEGRIILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+RYI+DR +PDKAIDLIDEA ++
Sbjct: 341 PSVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHRYITDRQLPDKAIDLIDEAGSR 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDS PE MD+L+RRLIQLK+E EA+++E DE+S+KRL +++EI + E +YA+LE+
Sbjct: 401 IRMEIDSMPEEMDRLDRRLIQLKMEREALRKEEDEASRKRLEKLEEEIAEQERQYADLEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IW+ EK ++ +Q+ K E+E+ R+++ +A R D +S+L+YG + +LE+ K + +D
Sbjct: 461 IWQAEKAALQGAQEYKAELEQARVEMEQARRAGDLNRMSELQYGVIPELEK--KVQQAQD 518
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ ++ LL+ KV EEIAE+VS+ TGIPVSK+++ E++KLL +E L +RVVGQD
Sbjct: 519 QEEQQAQSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEKDKLLRMEEALHQRVVGQD 578
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+++RIDM
Sbjct: 579 EAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALANFLFDTEEAMVRIDM 638
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 639 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL 698
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++FRNT++VMTSNLGSD I+++ D E +K AVM V +FRPEFI
Sbjct: 699 DDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGDNDYEAMKAAVMEVVGNHFRPEFI 758
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+ +VF L + + IA+IQL+ L+ +L + ++ L++S AAL K+ GFD +YGA
Sbjct: 759 NRVDETVVFHPLQKDQLKGIASIQLDFLRKRLAERDIRLELSDAALSKLVEAGFDPVYGA 818
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTLRMVYSMRNYA 738
R + K+++ L ++P A + G+ DT+R+ S Y+
Sbjct: 819 RPL---KRAIQQQL-----ENPLAQALLKGEFAQG-----DTIRVDVSESGYS 858
>gi|419840223|ref|ZP_14363619.1| ATP-dependent chaperone protein ClpB [Haemophilus haemolyticus
HK386]
gi|386908044|gb|EIJ72743.1| ATP-dependent chaperone protein ClpB [Haemophilus haemolyticus
HK386]
Length = 856
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/676 (60%), Positives = 547/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHRRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|16272799|ref|NP_439019.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
Rd KW20]
gi|1168973|sp|P44403.1|CLPB_HAEIN RecName: Full=Chaperone protein ClpB
gi|1573874|gb|AAC22518.1| ATP-dependent Clp protease, ATPase subunit (clpB) [Haemophilus
influenzae Rd KW20]
Length = 856
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 547/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPDLEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|145628239|ref|ZP_01784040.1| ClpB [Haemophilus influenzae 22.1-21]
gi|145638337|ref|ZP_01793947.1| ClpB [Haemophilus influenzae PittII]
gi|144980014|gb|EDJ89673.1| ClpB [Haemophilus influenzae 22.1-21]
gi|145272666|gb|EDK12573.1| ClpB [Haemophilus influenzae PittII]
gi|309751479|gb|ADO81463.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
R2866]
Length = 856
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|417844398|ref|ZP_12490442.1| Chaperone protein ClpB [Haemophilus haemolyticus M21639]
gi|341956851|gb|EGT83267.1| Chaperone protein ClpB [Haemophilus haemolyticus M21639]
Length = 856
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/676 (60%), Positives = 547/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK++++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELTEKEREYAELEEVWKSEKATLSGSQHIKQDLDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVGQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|456734399|gb|EMF59215.1| ClpB protein [Stenotrophomonas maltophilia EPM1]
Length = 859
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/716 (59%), Positives = 564/716 (78%), Gaps = 24/716 (3%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 143 GGENVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 263 DLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 323 KDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL +
Sbjct: 383 QLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+ LE ++++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG
Sbjct: 443 ENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMSEIQYG 502
Query: 371 ELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ L +E KD F L++ +V EEIAE+VSR TGIPV+K+++ E
Sbjct: 503 LLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E +L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 554 RDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELC 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K+L+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLIL
Sbjct: 614 KSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLIL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE- 606
LDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D
Sbjct: 674 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPE 733
Query: 607 ---IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + +
Sbjct: 734 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLK 793
Query: 664 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
L +S AA + N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 794 LAVSDAAFDLLGNVGFDPVYGARPL---KRAIQSQL-----ENPLAQQILSGAFVN 841
>gi|37678899|ref|NP_933508.1| clpB protein [Vibrio vulnificus YJ016]
gi|54035791|sp|Q7MNK1.1|CLPB_VIBVY RecName: Full=Chaperone protein ClpB
gi|37197640|dbj|BAC93479.1| clpB protein [Vibrio vulnificus YJ016]
Length = 857
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/677 (61%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDQNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N+ E ++A LE+IW EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELNEKEREFAELEEIWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLLK KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L++ +I SIA IQLN L N++ + L++S
Sbjct: 739 EQVMEVVTKHFRPEFLNRVDETVVFHPLSQDHIKSIAAIQLNRLANRMEEHGYQLEVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ I+ +GFD +YGAR
Sbjct: 799 ALELIAQVGFDPVYGAR 815
>gi|346725988|ref|YP_004852657.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650735|gb|AEO43359.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 861
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/682 (61%), Positives = 549/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 445 ESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +E IAE+VSR TGIPV+K+++ ER
Sbjct: 505 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEGIAEVVSRWTGIPVNKMLEGER 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 557 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 617 ALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 736
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 737 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 796
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + N+GFD +YGAR
Sbjct: 797 DLDDAALEVLGNVGFDPVYGAR 818
>gi|344208582|ref|YP_004793723.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia JV3]
gi|343779944|gb|AEM52497.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia JV3]
Length = 861
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/716 (58%), Positives = 565/716 (78%), Gaps = 24/716 (3%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 DLAKSEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K+I+ LE ++++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG
Sbjct: 445 EKDIDALEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELESAQRRQDFAKMSEIQYG 504
Query: 371 ELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ L +E KD F L++ +V EEIAE+VSR TGIPV+K+++ E
Sbjct: 505 LLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGE 555
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E +L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 556 RDKLLRMEEVLHNRVVGQEEAIRVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELC 615
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K+L+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLIL
Sbjct: 616 KSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLIL 675
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE- 606
LDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D
Sbjct: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPE 735
Query: 607 ---IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + +
Sbjct: 736 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLK 795
Query: 664 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
L +S AA + N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 796 LMVSDAAFDLLGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFVN 843
>gi|359787428|ref|ZP_09290476.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
GFAJ-1]
gi|359295309|gb|EHK59583.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
GFAJ-1]
Length = 859
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/683 (60%), Positives = 553/683 (80%), Gaps = 7/683 (1%)
Query: 6 NSLNVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSK 65
NSL G ++ E+ L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+K
Sbjct: 141 NSLR-GGASVDDANAEDQREALNKYTMDLTQRALDGKLDPVIGRDDEIRRTIQVLQRRTK 199
Query: 66 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 125
NNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERL 259
Query: 126 KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 185
K +LKE+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELSQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319
Query: 186 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 245
R+YIEKDAA ERRFQK+LV+EP E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTR 379
Query: 246 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 305
YI+DR +PDKAIDLIDEAA++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMELDSKPEEMDRLDRRLIQLKMEREALKKETDEATKK 439
Query: 306 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 365
RL + +I++LE +YA+L++IWK EK I+ + Q K E+E+ R+ + +A R+ D +S
Sbjct: 440 RLDALNNQIHELEREYADLDEIWKAEKASIQGAAQFKAELEQARIDLEQARRQGDLGRMS 499
Query: 366 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
+++YG++ LE+ + E + + ++ LL++ V EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGKIPALEKKISEAGEGEADTASH----QLLRSNVTEEEIAEVVSRWTGIPVSKMLE 555
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
ER+KLL +E L +RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLRMEEALHERVIGQHEAVEAVANAVRRSRAGLADPNRPNGSFLFLGPTGVGKTE 615
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
LCK+L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 603
+LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M +
Sbjct: 676 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDN 735
Query: 604 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
D E++K VM V +FRPE INRID+++VF L + I +IA IQL LK +L + ++
Sbjct: 736 DYEVMKSTVMEVVGNHFRPELINRIDEVVVFHALGQTQIQAIAGIQLERLKARLAEHDLS 795
Query: 664 LKISKAALKKISNIGFDLIYGAR 686
L+IS A+ +++ +GFD +YGAR
Sbjct: 796 LEISDDAMAQLAVVGFDPVYGAR 818
>gi|451936301|ref|YP_007460155.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777224|gb|AGF48199.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 861
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/691 (61%), Positives = 555/691 (80%), Gaps = 8/691 (1%)
Query: 2 GIKNNSL-----NVNGKNILSQ-QDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+KNN + N+ G N +S DE + L KYT D+T AR KLDPVIGRDDEIRR
Sbjct: 129 GLKNNLIKESINNIRGSNKISDMNDESNRNALSKYTTDITSLARQCKLDPVIGRDDEIRR 188
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLAQRIIN EVP+SL K++L LD+A L+AG
Sbjct: 189 TIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINREVPDSLRDKRVLSLDLASLIAGA 248
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
K+RGEFE+RLK +LK+IS + I+ FIDELHT++G GK EGSIDAGNMLKP L+RGELH
Sbjct: 249 KFRGEFEERLKTVLKDISVDSNSIL-FIDELHTIMGAGKAEGSIDAGNMLKPSLARGELH 307
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
CIGATTL+EYR+YIEKDAA ERRFQK++V+EPD+E TI+ILRGLQ++YE+HHGVEITDPA
Sbjct: 308 CIGATTLDEYRKYIEKDAALERRFQKVIVDEPDVESTIAILRGLQERYEIHHGVEITDPA 367
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS RYI+DRF+PDKAIDLIDEA A+I++EIDSKPE MDKLERR+IQLKIE EA+
Sbjct: 368 IVAAAELSNRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEAMDKLERRMIQLKIEREAV 427
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
K+E DE SKKRL +I+ E+ K++ +Y + EKIWK EK +++ ++ IKEEI+ ++ K+ +
Sbjct: 428 KKESDEVSKKRLYVIEDELKKIQEEYNSYEKIWKSEKNIVEGTKNIKEEIDGLKAKMAEL 487
Query: 356 TRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRT 415
R + +++L+Y +L +LE LK I ++ KF LL+T+VG+EEIAE+VS
Sbjct: 488 QRNGQYDLLAELQYSKLPELEEKLKSAENYSINQSSD-KKFKLLRTQVGAEEIAEVVSVA 546
Query: 416 TGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMF 475
TGIPVSK++Q EREKLL++ + L R++GQ EA+ AVS+AI R+R+GLSD RP GSF+F
Sbjct: 547 TGIPVSKMMQGEREKLLHMNDFLNSRIIGQSEAVRAVSDAILRARAGLSDQSRPSGSFLF 606
Query: 476 LGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLT 535
LGPTGVGKTEL K L+ +F++ + +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLT
Sbjct: 607 LGPTGVGKTELAKALADFMFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLT 666
Query: 536 EIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSD 595
E VRRKPYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD+ GRT++FRNT+I+MTSNLGS+
Sbjct: 667 EAVRRKPYSVVLLDEVEKAHLDVFNVLLQVLDDGRLTDSHGRTVDFRNTVIIMTSNLGSN 726
Query: 596 KIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKN 655
I+ M + I+ +M E+K+ RPEF+NRID+I+ F L + + SI IQ++ LK+
Sbjct: 727 HIQSMIDSTYDEIRKVLMEELKLTLRPEFLNRIDEIVFFHSLKSEQMASIVKIQIDQLKD 786
Query: 656 KLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+L + NM ++IS A+ ++ GFD+++GAR
Sbjct: 787 RLKQKNMHIEISNDAVSMLAKNGFDIVFGAR 817
>gi|408822107|ref|ZP_11206997.1| ATP-dependent chaperone ClpB [Pseudomonas geniculata N1]
Length = 861
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/716 (59%), Positives = 564/716 (78%), Gaps = 24/716 (3%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+ LE ++++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG
Sbjct: 445 ENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMSEIQYG 504
Query: 371 ELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ L +E KD F L++ +V EEIAE+VSR TGIPV+K+++ E
Sbjct: 505 LLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGE 555
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E +L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 556 RDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELC 615
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K+L+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLIL
Sbjct: 616 KSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLIL 675
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE- 606
LDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D
Sbjct: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSTDDSPE 735
Query: 607 ---IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + +
Sbjct: 736 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLK 795
Query: 664 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
L +S AA + N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 796 LMVSDAAFDLLGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFVN 843
>gi|350560805|ref|ZP_08929645.1| ATP-dependent chaperone ClpB [Thioalkalivibrio thiocyanoxidans ARh
4]
gi|349783073|gb|EGZ37356.1| ATP-dependent chaperone ClpB [Thioalkalivibrio thiocyanoxidans ARh
4]
Length = 857
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/677 (61%), Positives = 556/677 (82%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ E+ L+KYTIDLTE+A GKLDPVIGRDDEIRRA+QVLQRR+KNNPVL
Sbjct: 145 GGASVDDPSAEDTRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRAVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ LLAG KYRG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKDKRVLALDLGALLAGAKYRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHG+EITDPAIVAA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTLEDTIAILRGLKERYEVHHGIEITDPAIVAAAQLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEA+++I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KRL +
Sbjct: 385 QLPDKAIDLVDEASSRIRMEIDSKPEEMDRLDRRLIQLKIEREAMKKETDEASRKRLDAL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI +LE +Y++LE+IWK EK + + QIKE++E+ R+++ A R D +S+L+YG
Sbjct: 445 EDEIERLEREYSDLEEIWKSEKAAVTGAAQIKEDLERARMELETARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +L++ L++ ++ + + + LL+ KV EE+AE+VSR TGIPVSK+++ E++K
Sbjct: 505 RIPELQKGLEQAAELETR------ETRLLRNKVTDEEVAEVVSRWTGIPVSKMLEGEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + +RVVGQ+EA+ AV+NAIRR+R+GLSD RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLRMEEAIGQRVVGQEEAMRAVANAIRRARAGLSDPNRPSGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ E++++RIDMSEF+EKHS++R+IGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AAFLFDTEDAMVRIDMSEFMEKHSVARMIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD GRT++FRNT+IVMTSNLGS I+EM + + +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSQLIQEMAGEEHYQQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINRIDD++VF L R+ I +I +IQL +L+ +L + ++ ++S+A
Sbjct: 739 AAVMEVVGSHFRPEFINRIDDVVVFHPLGREQIRAITDIQLRLLRQRLAERDIAFEVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALDRLGEAGFDPVYGAR 815
>gi|260771107|ref|ZP_05880034.1| ClpB protein [Vibrio furnissii CIP 102972]
gi|260613704|gb|EEX38896.1| ClpB protein [Vibrio furnissii CIP 102972]
Length = 857
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/718 (58%), Positives = 564/718 (78%), Gaps = 15/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLNIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++W EK + +Q IK E+E+ RL + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWNAEKAALSGTQHIKSELEQARLDLEVARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPV+K+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVAKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L +RV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHQRVIGQVEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFASLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L R++I SIA+IQL L+ +LL+ + +L++S
Sbjct: 739 EQVMEVVSKHFRPEFLNRVDETVVFHPLGREHIKSIASIQLERLRKRLLEKDFELQVSDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
AL I+ +GFD +YGAR + K+++ + + ++P A I G + P LD
Sbjct: 799 ALDLIAQVGFDPVYGARPL---KRAI-----QQNVENPLAKSILAGTFLPGTPIKLDV 848
>gi|407692736|ref|YP_006817525.1| ATP-dependent Clp protease subunit B [Actinobacillus suis H91-0380]
gi|407388793|gb|AFU19286.1| ATP-dependent Clp protease subunit B [Actinobacillus suis H91-0380]
Length = 857
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/724 (57%), Positives = 576/724 (79%), Gaps = 14/724 (1%)
Query: 5 NNSLNV--NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQR 62
NN+++ G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQR
Sbjct: 135 NNAISQIRGGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQR 194
Query: 63 RSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFE 122
R+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE
Sbjct: 195 RTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFE 254
Query: 123 DRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTL 182
+RLK +L E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL
Sbjct: 255 ERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTL 314
Query: 183 NEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASEL 242
+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ L
Sbjct: 315 DEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATL 374
Query: 243 SYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDES 302
S+RYISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+
Sbjct: 375 SHRYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEA 434
Query: 303 SKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQ 362
S++RL + +E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+S+++
Sbjct: 435 SRQRLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELEYARIEMDQARRESNFE 494
Query: 363 TVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 422
+S+L+YG++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK
Sbjct: 495 KMSELQYGKIPALEKQLAEAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSK 550
Query: 423 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 482
+++ E+EKLL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVG
Sbjct: 551 MMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVG 610
Query: 483 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 542
KTELCKTL+ +F + ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+P
Sbjct: 611 KTELCKTLANFLFEDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRP 670
Query: 543 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 602
YS++LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E +
Sbjct: 671 YSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPE 730
Query: 603 GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 662
D +K VM+ V +FRPEFINRID+ +VF L +++I +IA IQL L +L +
Sbjct: 731 LDYASMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQEHIRAIARIQLQRLIARLAERGY 790
Query: 663 DLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 722
++ ++ AL I GFD ++GAR + K+++ L ++P A I G L+ P
Sbjct: 791 EVTVTDNALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSP 842
Query: 723 QSLD 726
+D
Sbjct: 843 VVVD 846
>gi|359396324|ref|ZP_09189376.1| Chaperone protein ClpB [Halomonas boliviensis LC1]
gi|357970589|gb|EHJ93036.1| Chaperone protein ClpB [Halomonas boliviensis LC1]
Length = 860
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/683 (60%), Positives = 554/683 (81%), Gaps = 7/683 (1%)
Query: 6 NSLNVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSK 65
NSL G + E+ L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+K
Sbjct: 141 NSLR-GGATVDDANAEDQREALNKYTMDLTQRALDGKLDPVIGRDDEIRRTIQVLQRRTK 199
Query: 66 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 125
NNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERL 259
Query: 126 KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 185
K +LKE+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELSQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319
Query: 186 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 245
R+YIEKDAA ERRFQK+LV+EP E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTR 379
Query: 246 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 305
YISDR +PDKAIDLIDEAA++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASRIRMELDSKPEAMDRLDRRLIQLKMEREALKKETDDASKK 439
Query: 306 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 365
RL + +I++LE +YA+L++IWK EK I+ + Q K ++E+ RL + +A R+ D +S
Sbjct: 440 RLEALSTQIHELEREYADLDEIWKAEKASIQGAAQFKADLEQARLDLEQARRQGDLGRMS 499
Query: 366 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
+++YG++ +LE+ + E + + + + LL++ V EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGKIPELEKKIAESGEGEA----DTSSHQLLRSNVTEEEIAEVVSRWTGIPVSKMLE 555
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
ER+KLL +E L +RV+GQ+EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLRMEEALHERVIGQNEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 615
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
LCK+L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 603
+LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M +
Sbjct: 676 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDS 735
Query: 604 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
D E +K VM V +FRPE INRID+++VF L ++ I +IA IQL LK +L + ++
Sbjct: 736 DYEEMKNRVMEVVGNHFRPELINRIDEVVVFHALGQEQIQAIAGIQLERLKLRLAEHDLK 795
Query: 664 LKISKAALKKISNIGFDLIYGAR 686
L++S A+ +++ +GFD +YGAR
Sbjct: 796 LEVSPEAMAQLAVVGFDPVYGAR 818
>gi|378697060|ref|YP_005179018.1| protein disaggregation chaperone [Haemophilus influenzae 10810]
gi|301169578|emb|CBW29179.1| protein disaggregation chaperone [Haemophilus influenzae 10810]
Length = 856
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPDLEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|350422236|ref|XP_003493100.1| PREDICTED: chaperone protein ClpB-like [Bombus impatiens]
Length = 856
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDSVNDANAEDQRNALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP L +K++L LD+ L+AG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNSEVPEGLRNKRVLSLDMGALIAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGRVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+L+RR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAASSIRMQMDSKPESLDRLDRRIIQLKLEQQALKKETDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E +YA+LE+ WK EK + +Q IKE++EK R ++ +A R D +S+L+YG
Sbjct: 445 SEELTEKEKEYASLEEEWKAEKAAVSGTQTIKEKLEKARTELEQARRAGDLNKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L + +Q + LL+ KV + EIAE++S++TGIPVS++++ E+EK
Sbjct: 505 RIPDLEKQLAQATQSE------GKTMKLLRNKVTAHEIAEVLSKSTGIPVSRMMESEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L +RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLHMEQALHQRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKAN +VFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS+ I+ + + +K
Sbjct: 679 VEKANPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSELIQGHDNLSYDEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM V +FRPEFINRID+ +VF L R+NI +IA IQL ++N+L + IS AA
Sbjct: 739 LVMTVVTQHFRPEFINRIDETVVFHPLGRENIKAIAKIQLARVENRLAEHGYQFTISDAA 798
Query: 671 LKKISNIGFDLIYGAR 686
L +++ +GFD IYGAR
Sbjct: 799 LSQLAEVGFDPIYGAR 814
>gi|322514940|ref|ZP_08067954.1| chaperone protein ClpB [Actinobacillus ureae ATCC 25976]
gi|322119090|gb|EFX91247.1| chaperone protein ClpB [Actinobacillus ureae ATCC 25976]
Length = 864
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/724 (57%), Positives = 576/724 (79%), Gaps = 14/724 (1%)
Query: 5 NNSLNV--NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQR 62
NN+++ GK + +Q EE L+KYTIDLTE+A GKLDPVIGRD+EIRRA+QVLQR
Sbjct: 142 NNAISQIRGGKTVNNQNAEETRQALQKYTIDLTERANAGKLDPVIGRDEEIRRAVQVLQR 201
Query: 63 RSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFE 122
R+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE
Sbjct: 202 RTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFE 261
Query: 123 DRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTL 182
+RLK +L E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL
Sbjct: 262 ERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTL 321
Query: 183 NEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASEL 242
+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ L
Sbjct: 322 DEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATL 381
Query: 243 SYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDES 302
S+RYISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+
Sbjct: 382 SHRYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEA 441
Query: 303 SKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQ 362
S++RL + +E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+S+++
Sbjct: 442 SRQRLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRESNFE 501
Query: 363 TVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 422
+S+L+YG++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK
Sbjct: 502 KMSELQYGKIPALEKQLAEAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSK 557
Query: 423 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 482
+++ E+EKLL +E++L RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVG
Sbjct: 558 MMEGEKEKLLRMEDVLHSRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVG 617
Query: 483 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 542
KTELCKTL+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+P
Sbjct: 618 KTELCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRP 677
Query: 543 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 602
YS++LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E
Sbjct: 678 YSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENAY 737
Query: 603 GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 662
+++K VM V +FRPEFINRID+ ++F L +++I +IA IQL L +L + +
Sbjct: 738 KGYDVVKTMVMEVVGQHFRPEFINRIDETVMFHSLGQEHIRAIARIQLQRLIARLAERDY 797
Query: 663 DLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 722
++ + AAL I GFD ++GAR + K+++ L ++P A I G L+ P
Sbjct: 798 EVTATDAALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQKILSGKLLPNSP 849
Query: 723 QSLD 726
+D
Sbjct: 850 VVVD 853
>gi|307250341|ref|ZP_07532290.1| hypothetical protein appser4_11220 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307254986|ref|ZP_07536804.1| hypothetical protein appser9_12200 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259422|ref|ZP_07541147.1| hypothetical protein appser11_12190 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306857616|gb|EFM89723.1| hypothetical protein appser4_11220 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861859|gb|EFM93835.1| hypothetical protein appser9_12200 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866358|gb|EFM98221.1| hypothetical protein appser11_12190 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 857
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/716 (58%), Positives = 572/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AA
Sbjct: 739 VVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I GFD ++GAR + K+++ L ++P + I G L+ P +D
Sbjct: 799 LDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVVD 846
>gi|153207187|ref|ZP_01945966.1| ATP-dependent chaperone ClpB [Coxiella burnetii 'MSU Goat Q177']
gi|212219427|ref|YP_002306214.1| ClpB [Coxiella burnetii CbuK_Q154]
gi|120576848|gb|EAX33472.1| ATP-dependent chaperone ClpB [Coxiella burnetii 'MSU Goat Q177']
gi|212013689|gb|ACJ21069.1| ClpB [Coxiella burnetii CbuK_Q154]
Length = 859
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/727 (60%), Positives = 579/727 (79%), Gaps = 13/727 (1%)
Query: 2 GIKNNSLNVN-GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
I+ N +N+ G+ + Q E+ L KYTIDLTEKA GKLDPVIGRD+EIRR +QVL
Sbjct: 135 AIEKNIMNLRKGERVTEQSAEDQRQALAKYTIDLTEKAETGKLDPVIGRDEEIRRTVQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L++I+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLRDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYR+YIEKDAA ERRFQK+LVEEP E+ I+ILRGL+++YEVHHGVEITDPAI+AA+
Sbjct: 315 TLDEYRKYIEKDAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
LS RYI+DR +PDKAIDLIDEAA++I++E+DSKP +D+LERRLIQLKIE EA+K+E D
Sbjct: 375 TLSQRYITDRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLKIEREALKKETD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+SKKRL ++ EI +E +Y++LE++WK EK + +QQIKEE+E+ R+++ A R D
Sbjct: 435 EASKKRLSDLETEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQARIELEAAGRAGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+S+L+YG + +L++ LK SQK+ Q ++ LL+++V EE+AE+VS+ T IPV
Sbjct: 495 LARMSELQYGIIPELDKKLKAASQKEEQFHDH----KLLRSRVTEEEVAEVVSKWTHIPV 550
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL++E L KRV+GQDEA++AV+NAIRRSR+GLSD RP GSF+FLGPTG
Sbjct: 551 SKMLEGEREKLLHMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTG 610
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+A +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR
Sbjct: 611 VGKTELCKALAAFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRR 670
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
+PYS+ILLDEIEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E
Sbjct: 671 RPYSVILLDEIEKAHNDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREF 730
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
+ + +K AVM V +FRPEFINRID+ +VF L ++ I +IA IQ++ +K +L +
Sbjct: 731 SGENYDKMKDAVMEVVAQHFRPEFINRIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEK 790
Query: 661 NMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN 719
+ L IS AL +S +G+D +YGAR + K+ L L+ + +K E F+ G LIN
Sbjct: 791 DYQLTISDDALDYLSELGYDPVYGARPL---KRVLQQQLENPLSQKILEGKFV-PGSLIN 846
Query: 720 ---KGPQ 723
KG Q
Sbjct: 847 IEKKGEQ 853
>gi|145636576|ref|ZP_01792243.1| ClpB [Haemophilus influenzae PittHH]
gi|145270102|gb|EDK10038.1| ClpB [Haemophilus influenzae PittHH]
Length = 856
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELVEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|358448455|ref|ZP_09158958.1| ATPase [Marinobacter manganoxydans MnI7-9]
gi|357227243|gb|EHJ05705.1| ATPase [Marinobacter manganoxydans MnI7-9]
Length = 858
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/678 (61%), Positives = 544/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR KNNPVL
Sbjct: 145 GGEAVNDASAEENRQALSKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+ L KK+L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+ IE
Sbjct: 265 ELSKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRENIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL +
Sbjct: 385 QLPDKAIDLVDEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKKRLSEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
I +E +YA+LE++W EK + SQ+IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 SDVITGVEREYADLEEVWNTEKAALHGSQKIKSRLEQARIDLENARRAGDLGKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LER L SQ ++ + LL+ +V EEIAEIVS+ TGIPVSK+++ ER+K
Sbjct: 505 QIPELERQLDMASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E L RV+GQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I++ + G++ E++
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQ-KAGEESYEVM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V +FRPEFINR+D+++VF L I IA IQ+ L +L + +M L++
Sbjct: 738 KNAVMEVVGTHFRPEFINRVDEVVVFHPLAESQIQGIARIQIESLSKRLKEQDMKLELDD 797
Query: 669 AALKKISNIGFDLIYGAR 686
AA++ ++ +G+D +YGAR
Sbjct: 798 AAMELLAEVGYDPVYGAR 815
>gi|399910053|ref|ZP_10778367.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
KM-1]
Length = 860
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/678 (60%), Positives = 555/678 (81%), Gaps = 6/678 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGERVDDPNAEESREALEKYTLDLTARAADGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+T++ILRGL+++YEVHH V+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHKVDITDGAIIAAAKLSTRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA+++I++E+DSKPE MD+L+RRLIQLK+E E +K+E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEASSRIRMELDSKPEEMDRLDRRLIQLKMEREHLKKETDEASRKRLESL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I++LE +YA+L++IWK EK I+ + Q KEE+EK ++++ +A RK D +S+L+YG
Sbjct: 445 QEQIDELEREYADLDEIWKAEKASIQGAGQFKEELEKAKIELEQAQRKGDLTRMSELRYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ + E S+ + + +K LL++ V EEIAE+VSR TGIPV+K+++ ER+K
Sbjct: 505 VIPELEKKITESSEAEA----DTSKHKLLRSSVTEEEIAEVVSRWTGIPVAKMLEGERDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA++AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 561 LLRMEEALHRRVIGQEEAVTAVANAVRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 621 ANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ + D E +
Sbjct: 681 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRLGGDDTKYEEM 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM+ V ++FRPE INRID+++VF L + I +IA IQL+ L+ +L + M L++S
Sbjct: 741 KQAVMDVVGMHFRPELINRIDEVVVFHALRQAQIEAIAGIQLDRLRARLAEHGMQLEVSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
A+ +++ GFD ++GAR
Sbjct: 801 EAMAQLALAGFDPVFGAR 818
>gi|260581686|ref|ZP_05849483.1| ATP-dependent chaperone ClpB [Haemophilus influenzae NT127]
gi|260095279|gb|EEW79170.1| ATP-dependent chaperone ClpB [Haemophilus influenzae NT127]
Length = 856
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 545/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPDLEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|344340643|ref|ZP_08771567.1| ATP-dependent chaperone ClpB [Thiocapsa marina 5811]
gi|343799324|gb|EGV17274.1| ATP-dependent chaperone ClpB [Thiocapsa marina 5811]
Length = 864
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/677 (61%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ EE L+K+TID+TE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQSVNDPNAEEQRQALEKFTIDMTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRLLSLDMAALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 265 DIGRQEGNIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHAVEITDPAIVAAAVLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDS PE MD+L RRLIQLKIE A+++E DE+SKKRL +
Sbjct: 385 QLPDKAIDLIDEAASQIRMEIDSMPEEMDRLNRRLIQLKIEQVALRKESDEASKKRLTDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I + E ++++L++IWK EK ++ + IKE +++ R+++ A R D +S+L+YG
Sbjct: 445 ESQIERAEREFSDLDEIWKSEKAAVQGTAHIKEALDRARVEMETARRAGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L S D + N LL+ KV EEIAEIVS+ TGIPVS++++ ER+K
Sbjct: 505 RIPELEKQL--ASAADAEQGEN----RLLRNKVTEEEIAEIVSKWTGIPVSRMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + KRVVGQ EA+ AVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQEIEKRVVGQAEAVRAVSDAIRRSRAGLSDPGRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSLILLDE
Sbjct: 619 AAFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN +IVMTSNLGSD I+++ + + +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSDVIQQVAGEANYAEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V++ FRPEFINR+D+I+VF L I +IA IQ++ L+ +L +M L++S A
Sbjct: 739 DAVMEIVRVAFRPEFINRLDEIVVFHPLQPAQIRAIARIQIDYLRKRLADRDMALEVSDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL + GFD +YGAR
Sbjct: 799 ALDHLGEAGFDPVYGAR 815
>gi|451812049|ref|YP_007448503.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777951|gb|AGF48899.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 861
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/691 (61%), Positives = 558/691 (80%), Gaps = 8/691 (1%)
Query: 2 GIKNNSL-----NVNGKNILSQ-QDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+K N L N+ G + +S DE + L KYT D+T AR GKLDPVIGRDDEIRR
Sbjct: 129 GLKTNLLKESINNIRGSDKISNMNDESNRNALSKYTTDVTSLARQGKLDPVIGRDDEIRR 188
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP++L K++L LD+A L+AG
Sbjct: 189 TIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDNLRDKRVLSLDLASLVAGA 248
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
K+RGEFE+RLK +LK+IS + I+ FIDELHT++G GK EGSIDAGNMLKP L+RGELH
Sbjct: 249 KFRGEFEERLKAVLKDISVDCSSIL-FIDELHTIMGAGKAEGSIDAGNMLKPALARGELH 307
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
CIGATTL+EYR+YIEKDAA ERRFQK++V+EP++E TI+ILRGLQ++YE+HHGVEITDPA
Sbjct: 308 CIGATTLDEYRKYIEKDAALERRFQKVIVDEPNVESTIAILRGLQERYEIHHGVEITDPA 367
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ELS RYI+DRF+PDKAIDLIDEA A+I++EIDSKPE MDKLERR+IQLKIE EA+
Sbjct: 368 IVAAAELSNRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEAMDKLERRIIQLKIEREAV 427
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
K+E D+ SK+RL +I+ E+ K++ +Y + EKIWK EK +++ ++ IKEEI+ ++ K+ +
Sbjct: 428 KKESDDVSKRRLCVIEDELKKIQQEYNDYEKIWKSEKNVVEGTKNIKEEIDSLKAKMAEF 487
Query: 356 TRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRT 415
R + +++L+Y +L +LE LK I ++ KF LL+T+VG+EEIAE+VSR
Sbjct: 488 QRNGQYDRLAELQYSKLPELEEKLKSAESYSINQSSD-KKFKLLRTQVGAEEIAEVVSRA 546
Query: 416 TGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMF 475
TGIPVSK++Q EREKLL++ + L +++GQ EA++AVS+AI R+R+GLSD RP GSF+F
Sbjct: 547 TGIPVSKMMQGEREKLLHMSDFLNSKIIGQSEAVNAVSDAILRARAGLSDQSRPSGSFLF 606
Query: 476 LGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLT 535
LGPTGVGKTEL K L+ +F++ + +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLT
Sbjct: 607 LGPTGVGKTELAKALADFMFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLT 666
Query: 536 EIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSD 595
E VRRKPYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD+ GRT++FRNTII+MTSNLGS+
Sbjct: 667 EAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNLGSN 726
Query: 596 KIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKN 655
I+ M + I+ VM E+K RPEF+NRID+I+ F L + + SI IQ++ LK+
Sbjct: 727 HIQSMMNDTYDEIRKVVMEELKATLRPEFLNRIDEIVFFHSLKLEQMSSIVKIQIDQLKD 786
Query: 656 KLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+L + +M + +++ A+ ++N GFD+++GAR
Sbjct: 787 RLKQKSMRIDLTENAISSLANKGFDIVFGAR 817
>gi|385330270|ref|YP_005884221.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
gi|311693420|gb|ADP96293.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
Length = 858
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/678 (61%), Positives = 544/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR KNNPVL
Sbjct: 145 GGEAVNDASAEENRQALSKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+ L KK+L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+ IE
Sbjct: 265 ELSKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRENIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL +
Sbjct: 385 QLPDKAIDLVDEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKKRLSEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
I +E +YA+LE++W EK + SQ+IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 SDVITGVEREYADLEEVWNTEKAALHGSQKIKSRLEQARIDLENARRAGDLGKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LER L SQ ++ + LL+ +V EEIAEIVS+ TGIPVSK+++ ER+K
Sbjct: 505 QIPELERQLDMASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E L RV+GQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I++ + G++ E++
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQ-KAGEENYEVM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V +FRPEFINR+D+++VF L I IA IQ+ L +L + +M L++
Sbjct: 738 KNAVMEVVGTHFRPEFINRVDEVVVFHPLAESQIQGIARIQIESLSKRLKEQDMKLELDD 797
Query: 669 AALKKISNIGFDLIYGAR 686
AA++ ++ +G+D +YGAR
Sbjct: 798 AAMELLAEVGYDPVYGAR 815
>gi|27363946|ref|NP_759474.1| ATP-dependent chaperone ClpB [Vibrio vulnificus CMCP6]
gi|54035847|sp|Q8DEV2.1|CLPB_VIBVU RecName: Full=Chaperone protein ClpB
gi|27360063|gb|AAO09001.1| ATP-dependent chaperone ClpB [Vibrio vulnificus CMCP6]
Length = 857
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/677 (61%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDQNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N+ E ++A LE+IW EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELNEKEREFAELEEIWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLLK KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L + +I SIA IQLN L N++ + L++S
Sbjct: 739 EQVMEVVTKHFRPEFLNRVDETVVFHPLGQDHIKSIAAIQLNRLANRMEEHGYPLEVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ I+ +GFD +YGAR
Sbjct: 799 ALELIAQVGFDPVYGAR 815
>gi|52425838|ref|YP_088975.1| ClpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307890|gb|AAU38390.1| ClpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 856
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/716 (58%), Positives = 562/716 (78%), Gaps = 14/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q EE L+KYTIDLTE+A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQSVNDQNAEESRQALEKYTIDLTERAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAQEEGKVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLDRRIIQLKLEQQALKKEEDEASRKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+++ E +YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG
Sbjct: 445 EKELSEKEREYAELEEVWKSEKAALSGTQHIKAELESARTQMEQARRAGDLNKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L + + +LL+ +V EEIA+++SR TGIPVS++++ E+EK
Sbjct: 505 TIPALEKQLAAADSAE------GKEMSLLRNRVTDEEIAQVLSRATGIPVSRMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQGEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + E +K
Sbjct: 679 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQENKDLGYEGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA IQL L ++ + + S+
Sbjct: 739 IVMSVVGQHFRPEFINRIDETVVFHPLAKENIKAIAQIQLARLTKRMEQHGYAINFSETL 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L IS +G+D +YGAR + K+++ + ++P A I G L+ P ++D
Sbjct: 799 LDFISEVGYDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLLPAKPVTVD 846
>gi|448747291|ref|ZP_21728952.1| Chaperonin ClpB [Halomonas titanicae BH1]
gi|445565203|gb|ELY21315.1| Chaperonin ClpB [Halomonas titanicae BH1]
Length = 885
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/688 (60%), Positives = 554/688 (80%), Gaps = 12/688 (1%)
Query: 6 NSLNVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSK 65
NSL G + E+ L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+K
Sbjct: 161 NSLR-GGATVDDANAEDQREALNKYTMDLTQRALDGKLDPVIGRDDEIRRTIQVLQRRTK 219
Query: 66 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 125
NNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RL
Sbjct: 220 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKEKRVLSLDMGSLLAGAKFRGEFEERL 279
Query: 126 KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 185
K +LKE+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 280 KAVLKELSQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 339
Query: 186 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 245
R+YIEKDAA ERRFQK+LV+EP E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 340 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTR 399
Query: 246 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 305
YI+DR +PDKAIDLIDEAA++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE++KK
Sbjct: 400 YITDRQLPDKAIDLIDEAASRIRMELDSKPEAMDRLDRRLIQLKMEREALKKETDEATKK 459
Query: 306 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 365
RL + +I++LE +YA+L++IWK EK I+ + Q K E+E+ R+ + +A R+ D +S
Sbjct: 460 RLEALNTQIHELEREYADLDEIWKAEKASIQGAAQFKAELEQARIDLEQARRQGDLGRMS 519
Query: 366 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
+++YG++ +LE+ + E + + + + LL++ V EEIAE+VSR TGIPVSK+++
Sbjct: 520 EIQYGKIPELEKKIAESGEGEA----DTSSHQLLRSNVTEEEIAEVVSRWTGIPVSKMLE 575
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
ER+KLL +E L +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTE
Sbjct: 576 GERDKLLRMEEALHQRVIGQDEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 635
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
LCK+L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 636 LCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 695
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM----- 600
+LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M
Sbjct: 696 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDVS 755
Query: 601 --EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 658
+ D E +K VM V +FRPE INRID+++VF L ++ I +IA IQL LK +L
Sbjct: 756 ADKDSDYESMKNMVMEVVGNHFRPELINRIDEVVVFHALGQEQIQAIAGIQLERLKVRLA 815
Query: 659 KMNMDLKISKAALKKISNIGFDLIYGAR 686
+ ++ L++S A+ +++ +GFD +YGAR
Sbjct: 816 EHDLKLEVSPEAMAQLAVVGFDPVYGAR 843
>gi|424790554|ref|ZP_18217088.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422797974|gb|EKU26148.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 861
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/680 (60%), Positives = 551/680 (81%), Gaps = 10/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ E+ L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSESAEDQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRGRRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKTEGQVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KL+ ++++L+++W+ EK ++ + +IKE+IE+ R+++ A R+ D+ +S+++YG
Sbjct: 445 ESDIDKLQREFSDLDEVWRSEKATLQGATRIKEQIEQARVELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L LE+ L + + F L++ +V +EEIAE+VSR TGIPV+++++ ER+K
Sbjct: 505 LLPNLEKQLAAAGDAE------HHDFKLVQDRVTAEEIAEVVSRWTGIPVNRMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQ EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDELHRRVVGQQEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE
Sbjct: 619 AEFLFDSSEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI-- 607
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYT 738
Query: 608 -IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L +L + + +++
Sbjct: 739 QMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLGGLDKRLAERGLKIEL 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AL+ + N+GFD +YGAR
Sbjct: 799 SDRALELLGNVGFDPVYGAR 818
>gi|219870451|ref|YP_002474826.1| ATP-dependent Clp protease subunit B [Haemophilus parasuis SH0165]
gi|219690655|gb|ACL31878.1| ATP-dependent Clp protease chain B/ATPases with chaperone activity,
ATP-binding subunit [Haemophilus parasuis SH0165]
Length = 857
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 558/677 (82%), Gaps = 5/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRR +QVLQRR+KNNPVL
Sbjct: 143 GGESVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRTVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++ E +YA LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEDLTAREREYAELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L+E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLQEAVKREEEGGEN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQSEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDQDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E E + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENAENMSYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VMN V +FRPEFINRID+ +VF L+++NI +IA IQL L ++ + ++ ++ A
Sbjct: 739 TIVMNVVGQHFRPEFINRIDETVVFHPLDKENIRAIARIQLERLIKRMAERGYEVTVTDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+ I GFD ++GAR
Sbjct: 799 AVDHIGEAGFDPLFGAR 815
>gi|390989198|ref|ZP_10259497.1| ATP-dependent chaperone ClpB [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372555956|emb|CCF66472.1| ATP-dependent chaperone ClpB [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 859
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/682 (61%), Positives = 549/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 143 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 263 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 323 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL +
Sbjct: 383 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++ +L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG
Sbjct: 443 ETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 503 VLPQLE--------KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 554
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 555 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 614
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 615 ALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 674
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 675 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 734
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 735 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 794
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + ++GFD +YGAR
Sbjct: 795 DLDDAALEVLGSVGFDPVYGAR 816
>gi|402306300|ref|ZP_10825350.1| ATP-dependent chaperone protein ClpB [Haemophilus sputorum HK 2154]
gi|400375371|gb|EJP28273.1| ATP-dependent chaperone protein ClpB [Haemophilus sputorum HK 2154]
Length = 858
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/716 (57%), Positives = 571/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ +Q EE LKKYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 144 GGDNVNTQNAEETRQALKKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 264 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 324 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 384 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+ +++A R+++++ +S+L+YG
Sbjct: 444 DEELAAKEREYSELEEVWKAEKSALLGTQHIKTELENARIAMDQARRENNFEKMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L+E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 504 KIPALEKQLQEAVKREEEGSEN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 560 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 620 ASFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + +K
Sbjct: 680 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEAPEASYAEMKA 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRIDD +VF L +++I +IA IQL L ++ + ++ ++ A
Sbjct: 740 LVMSVVGQHFRPEFINRIDDTVVFHPLGQEHIRAIARIQLERLIKRMAERGYEVTVTDDA 799
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
+ I GFD ++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 800 IDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVVD 847
>gi|384420306|ref|YP_005629666.1| chaperone ClpB [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353463219|gb|AEQ97498.1| chaperone ClpB [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 906
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/682 (61%), Positives = 550/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 190 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 249
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 250 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 309
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 310 DLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 369
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 370 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 429
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL +
Sbjct: 430 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADL 489
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++ +L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 490 ESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 549
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 550 VLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 601
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 602 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 661
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEFIEKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY+LILL
Sbjct: 662 ALADFLFDSTEAMIRIDMSEFIEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYALILL 721
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI 607
DE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 722 DEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQQIQELSGDGSAEA 781
Query: 608 ---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 782 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLRL 841
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + N+GFD +YGAR
Sbjct: 842 DLDDAALELLGNVGFDPVYGAR 863
>gi|410862267|ref|YP_006977501.1| ClpB protein [Alteromonas macleodii AltDE1]
gi|410819529|gb|AFV86146.1| ClpB protein [Alteromonas macleodii AltDE1]
Length = 858
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/718 (58%), Positives = 564/718 (78%), Gaps = 15/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+KYT DLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 145 GGQKVTDPNAEDVRQALEKYTTDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE MD+LERR+IQLK+E +A+ +E D++S KRL +I
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPEDMDRLERRIIQLKLEEQALAKETDDASHKRLEMI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E + E KYA LEK+W EK ++ +Q IK E+E+ +L + A R SD +S+L+YG
Sbjct: 445 ELEREQAETKYAELEKVWLDEKDAMQGTQTIKGELEQAKLDLEIARRASDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE L++ ++ N + TLLK KV EIA+++SR TGIPV+++++ EREK
Sbjct: 505 RIPELEAKLEQAAE------NETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRVVGQ+EA+ +VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDVLHKRVVGQEEAVQSVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E+++IRIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMIRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+++MTSNLGSD I++ + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQDKHSESQYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VMN V +FRPEFINR+DDI+VF L ++ I SIA IQL L+ +L L +S A
Sbjct: 739 GMVMNVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLASLRARLADKGYKLTLSAA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
A+ K++ GFD ++GAR + K+++ ++ ++P A+ + G+LI + +D
Sbjct: 799 AMDKLAEAGFDPVFGARPL---KRAI-----QVQVENPLAHQLLAGELIPESTVRIDA 848
>gi|54035866|sp|Q8PHQ4.2|CLPB_XANAC RecName: Full=Chaperone protein ClpB
Length = 861
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/682 (61%), Positives = 549/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++ +L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG
Sbjct: 445 ETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 505 VLPQLE--------KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 557 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 617 ALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 736
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 737 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 796
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + ++GFD +YGAR
Sbjct: 797 DLDDAALEVLGSVGFDPVYGAR 818
>gi|163802431|ref|ZP_02196324.1| ClpB protein [Vibrio sp. AND4]
gi|159173732|gb|EDP58547.1| ClpB protein [Vibrio sp. AND4]
Length = 860
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/677 (61%), Positives = 551/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNENDDASEKRLDVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N+ E +YA LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 NEELNEKEREYAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E++L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLHMEDVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L +L + L++S+
Sbjct: 739 NEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLEHLAKRLEEKGYQLEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ IS +GFD +YGAR
Sbjct: 799 ALELISQVGFDPVYGAR 815
>gi|29653454|ref|NP_819146.1| ATP-dependent chaperone ClpB [Coxiella burnetii RSA 493]
gi|161830087|ref|YP_001596062.1| ATP-dependent chaperone ClpB [Coxiella burnetii RSA 331]
gi|212213377|ref|YP_002304313.1| ClpB [Coxiella burnetii CbuG_Q212]
gi|54035826|sp|Q83F55.1|CLPB_COXBU RecName: Full=Chaperone protein ClpB
gi|29540716|gb|AAO89660.1| ClpB [Coxiella burnetii RSA 493]
gi|161761954|gb|ABX77596.1| ATP-dependent chaperone ClpB [Coxiella burnetii RSA 331]
gi|212011787|gb|ACJ19168.1| ClpB [Coxiella burnetii CbuG_Q212]
Length = 859
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/727 (60%), Positives = 578/727 (79%), Gaps = 13/727 (1%)
Query: 2 GIKNNSLNVN-GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
I+ N +N+ G+ + Q E+ L KYTIDLTEKA GKLDPVIGRD+EIRR +QVL
Sbjct: 135 AIEKNIMNLRKGERVTEQSAEDQRQALAKYTIDLTEKAETGKLDPVIGRDEEIRRTVQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +LK+I+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLKDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYR+YIEKDAA ERRFQK+LVEEP E+ I+ILRGL+++YEVHHGVEITDPAI+AA+
Sbjct: 315 TLDEYRKYIEKDAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
LS RYI+DR +PDKAIDLIDEAA++I++E+DSKP +D+LERRLIQLKIE EA+K+E D
Sbjct: 375 TLSQRYITDRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLKIEREALKKETD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+SKKRL ++ EI +E +Y++LE++WK EK + +QQIKEE+E+ R+++ A R D
Sbjct: 435 EASKKRLSDLETEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQARIELEAAGRAGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+S+L+YG + +L++ LK SQK+ Q ++ LL+++V EE+AE+VS+ T IPV
Sbjct: 495 LARMSELQYGIIPELDKKLKAASQKEEQFHDH----KLLRSRVTEEEVAEVVSKWTHIPV 550
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL++E L KRV+GQDEA++AV+NAIRRSR+GLSD RP GSF+FLGPTG
Sbjct: 551 SKMLEGEREKLLHMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTG 610
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR
Sbjct: 611 VGKTELCKALAVFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRR 670
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
+PYS+ILLDEIEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E
Sbjct: 671 RPYSVILLDEIEKAHNDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREF 730
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
+ + +K AVM V +FRPEFINRID+ +VF L ++ I +IA IQ++ +K +L +
Sbjct: 731 SGENYDKMKDAVMEVVAQHFRPEFINRIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEK 790
Query: 661 NMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN 719
+ L IS AL +S +G+D +YGAR + K+ L L+ + +K E F+ G LIN
Sbjct: 791 DYQLTISDDALDYLSELGYDPVYGARPL---KRVLQQQLENPLSQKILEGKFV-PGSLIN 846
Query: 720 ---KGPQ 723
KG Q
Sbjct: 847 IEKKGEQ 853
>gi|388546356|ref|ZP_10149632.1| chaperone [Pseudomonas sp. M47T1]
gi|388275593|gb|EIK95179.1| chaperone [Pseudomonas sp. M47T1]
Length = 854
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/686 (61%), Positives = 558/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N +N+ G ++ + E+ L+KYT+DLT++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAIINLRGGEAVNDANAEDSRKSLEKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L ++S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKGVLNDLSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TLNEYRQYIEKDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA+
Sbjct: 315 TLNEYRQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E++ KRL + +EI +LE +YA+LE++W EK ++ S QI+++IE+ R ++ A R+ D
Sbjct: 435 EAAIKRLEKLTEEITRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRRGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++L+YG + LER L+ Q + + LL++KV EEIAE+VS+ TGIPV
Sbjct: 495 LNRMAELQYGIIPDLERSLQMVDQ------HGKSDNQLLRSKVTEEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E+LL +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTG
Sbjct: 549 SKMLEGEREKLLKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTDN+GRT++FRNT+IVMTSNLGS +I+E+
Sbjct: 669 KPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDNQGRTVDFRNTVIVMTSNLGSAQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD+E + AVM+ V +FRPEFINRID++++F L R I I IQL L+++L +
Sbjct: 729 -TGDREAQRAAVMDAVSSHFRPEFINRIDEVVIFEALARDQIAGITQIQLGRLRSRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
++L +S AL K+ +G+D +YGAR
Sbjct: 788 ELNLTLSDEALDKLIAVGYDPVYGAR 813
>gi|269962555|ref|ZP_06176903.1| clpB protein [Vibrio harveyi 1DA3]
gi|424047832|ref|ZP_17785388.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-03]
gi|269832750|gb|EEZ86861.1| clpB protein [Vibrio harveyi 1DA3]
gi|408883142|gb|EKM21929.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-03]
Length = 857
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/677 (61%), Positives = 549/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+N+ E +YA LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 NDELNEKEREYAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL+ L +L + L++S+
Sbjct: 739 NEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLDRLAKRLEEKGYQLEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|148828042|ref|YP_001292795.1| DNA polymerase I [Haemophilus influenzae PittGG]
gi|148719284|gb|ABR00412.1| DNA polymerase I [Haemophilus influenzae PittGG]
Length = 856
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AV+NAIRR R+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQEEAVDAVANAIRRRRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|381150512|ref|ZP_09862381.1| ATP-dependent chaperone ClpB [Methylomicrobium album BG8]
gi|380882484|gb|EIC28361.1| ATP-dependent chaperone ClpB [Methylomicrobium album BG8]
Length = 858
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/677 (61%), Positives = 548/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ LKKYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQQVDDPNAEDQRQALKKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + K++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKGKRVLALDMAALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 265 DLAKQEGQVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL++KYEVHHGVEITDPAIVAA+ LSYRYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKEKYEVHHGVEITDPAIVAAAGLSYRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++E DSKPE MD+L+RRLIQLKIE A+K+E D +SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASRIRMEQDSKPEEMDRLDRRLIQLKIEQVALKKESDPASKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI ++E Y++LE+IWK EK ++ S IKE+++ ++++ A R D +++L+YG
Sbjct: 445 EEEIAEVEKDYSDLEEIWKAEKASLQGSASIKEKLDHAKVELESARRAGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + A K TLL+ KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPELEKQLAQAGT------GEAKKMTLLRNKVTEEEIAEVVSKWTGIPVSKMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + KRVVGQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEAISKRVVGQEEALKAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+IL+DE
Sbjct: 619 AEFLFDTADALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS +I+E+ + + + +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSSRIQELAGEANYQEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V ++FRPEFINRID+++VF L R+ I +IA IQ+ L+ +L + +IS+A
Sbjct: 739 NEVMEIVGMHFRPEFINRIDEVVVFHPLEREQIRAIAKIQIANLQKRLADREIGFEISEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALDRLGEAGFDPVYGAR 815
>gi|381395263|ref|ZP_09920967.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
punicea DSM 14233 = ACAM 611]
gi|379329072|dbj|GAB56100.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
punicea DSM 14233 = ACAM 611]
Length = 857
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/678 (62%), Positives = 543/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
NG+ + Q E+ L+KYT DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 NGQKVTDQNAEDVRQALEKYTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGSLLAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAREEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVE+P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYISDR
Sbjct: 325 KDAALERRFQKVLVEQPSVEDTIAILRGLKERYELHHAVDITDPAIVAAASLSNRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE MDKLERR+IQLK+E +A+ +E D +S KRL +I
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEEMDKLERRIIQLKLEEQALAKETDTASLKRLEII 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E + EIKYA LEK+W EK ++ +Q IK ++E+ +L + A R SD +S+L+YG
Sbjct: 445 ELEREQAEIKYAELEKVWNKEKEAMQGTQGIKTDLEQAKLDLEIARRASDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L++ +Q +I + TLLK KV EIA+++SR TGIPV K++ E++K
Sbjct: 505 KIPALEQKLEKAAQNEI------TENTLLKNKVTEVEIADVLSRWTGIPVRKMLGGEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+N+E + ++V+GQ EA+ AVSNAIRRSR+GL+D +P GS +FLGPTGVGKTELCK L
Sbjct: 559 LINMEAAIARQVIGQTEAVKAVSNAIRRSRAGLADPDKPVGSLLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ATFMFDTQEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD GRT+NF+NTII+MTSNLGSD I + + G++ +++
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGHGRTVNFKNTIIIMTSNLGSD-IIQAQSGEENYVQM 737
Query: 611 --AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
+VM V +FRPEFINR+DDI+VF L + I +IA IQLN L+ +L +M L+IS
Sbjct: 738 KASVMQVVGTHFRPEFINRVDDIVVFHLLGMQEIKAIAKIQLNGLRQRLSEMGYQLEISA 797
Query: 669 AALKKISNIGFDLIYGAR 686
AL K++ GFD YGAR
Sbjct: 798 RALDKLAESGFDPTYGAR 815
>gi|167625158|ref|YP_001675452.1| ATPase [Shewanella halifaxensis HAW-EB4]
gi|167355180|gb|ABZ77793.1| ATPase AAA-2 domain protein [Shewanella halifaxensis HAW-EB4]
Length = 857
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/677 (61%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
NG+N+ E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVL
Sbjct: 145 NGQNVDDPNAEDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR IQLK+E +A+ +E DE+S +RL ++
Sbjct: 385 KLPDKAIDLIDEAASSIRIQIDSKPESLDRLERRAIQLKLEEQALSKEADEASLRRLDVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ +E K A L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 RAELKDVEAKAAELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ ER+K
Sbjct: 505 RIPELEKQLDLASQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+++VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEDALHERVIGQNEAVNSVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AKFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK-EMEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ K + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQMGFGKQTYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEF+NRID+ +VF L+ KNI IA IQ+ LK +L + + L+ISK
Sbjct: 739 FDVMQVVTQNFRPEFLNRIDEAVVFHPLHEKNIAHIAAIQIEGLKQRLAEKDYGLEISKD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD IYGAR
Sbjct: 799 ALSFIARVGFDPIYGAR 815
>gi|88707050|ref|ZP_01104746.1| Chaperone clpB [Congregibacter litoralis KT71]
gi|88698700|gb|EAQ95823.1| Chaperone clpB [Congregibacter litoralis KT71]
Length = 862
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/678 (62%), Positives = 551/678 (81%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ S EE L+KYTIDLTE+AR GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 143 GGASVDSADAEETRQALEKYTIDLTERARDGKLDPVIGRDDEIRRTVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQR+INGEVP L K+IL LD+ LLAGTK+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRVINGEVPEGLRDKRILSLDLGALLAGTKFRGEFEERLKALLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQY+E
Sbjct: 263 ELSKEEGRVILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRQYVE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 323 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAAAQLSQRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE +D+LERRLIQLKIE EA++++ DES+ K+L L+
Sbjct: 383 QLPDKAIDLIDEAASRIRMEIDSKPEALDRLERRLIQLKIEREAVRKDEDESATKQLALL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++I +E ++A+LE+IWK EK ++ + +K +IE+++L + A R D +S+L+YG
Sbjct: 443 DEQITAIEKEFADLEEIWKAEKASLQGAASVKSDIEQLKLDLETARRAGDLTRMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L + Q N + TLL+ KV EE+AE+VSR TGIP+SK+++ +R+K
Sbjct: 503 KLPELEKQLAQA-----QAAENVER-TLLRNKVTDEEVAEVVSRWTGIPISKMLEGDRDK 556
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 557 LLRMEDALHDRVVGQDEAVVAVANAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTELCKAL 616
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE
Sbjct: 617 ADFLFDSEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDE 676
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E+ GD+ + +
Sbjct: 677 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEL-AGDQNYDAM 735
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V +FRPEFINR+D+ +VF L ++ I IA IQL L+ +L + M L I+
Sbjct: 736 KAAVMGVVSQHFRPEFINRVDETVVFHPLLQEQIRGIATIQLAGLRARLGEREMALDITD 795
Query: 669 AALKKISNIGFDLIYGAR 686
A + ++ GFD +YGAR
Sbjct: 796 AFMDQLVEGGFDPVYGAR 813
>gi|21243921|ref|NP_643503.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citri str. 306]
gi|21109529|gb|AAM38039.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citri str. 306]
Length = 871
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/682 (61%), Positives = 549/682 (80%), Gaps = 14/682 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 155 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 214
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 215 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 274
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 275 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 334
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 335 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 394
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL +
Sbjct: 395 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADL 454
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++ +L ++WK EK ++ + ++KE+IE +L++ A R+ D+ +S+++YG
Sbjct: 455 ETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYG 514
Query: 371 ELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
L +LE K + L N + F L++ +V +EEIAE+VSR TGIPV+K+++ ER
Sbjct: 515 VLPQLE--------KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGER 566
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 567 DKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCK 626
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILL
Sbjct: 627 ALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILL 686
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE-- 606
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 687 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEA 746
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + + L
Sbjct: 747 YTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKL 806
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+ AAL+ + ++GFD +YGAR
Sbjct: 807 DLDDAALEVLGSVGFDPVYGAR 828
>gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208559|ref|YP_001053784.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|126097351|gb|ABN74179.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
Length = 857
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/716 (57%), Positives = 571/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE RR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAARRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AA
Sbjct: 739 VVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I GFD ++GAR + K+++ L ++P + I G L+ P +D
Sbjct: 799 LDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVVD 846
>gi|156973326|ref|YP_001444233.1| hypothetical protein VIBHAR_01007 [Vibrio harveyi ATCC BAA-1116]
gi|156524920|gb|ABU70006.1| hypothetical protein VIBHAR_01007 [Vibrio harveyi ATCC BAA-1116]
Length = 857
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/677 (61%), Positives = 549/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N+ E +YA LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 NEELNEKEREYAELEEVWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L +L + L+IS+
Sbjct: 739 NEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEISEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|194366917|ref|YP_002029527.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia R551-3]
gi|194349721|gb|ACF52844.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia R551-3]
Length = 861
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/716 (58%), Positives = 564/716 (78%), Gaps = 24/716 (3%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 DLAKSEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+ LE ++++L +IWK EK ++ + +IKE++E+ +L++ A R+ D+ +S+++YG
Sbjct: 445 ENDIDGLEREFSDLNEIWKSEKAALQGTTKIKEQVEQAKLELESAQRRQDFAKMSEIQYG 504
Query: 371 ELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ L +E KD F L++ +V EEIAE+VSR TGIPV+K+++ E
Sbjct: 505 LLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGE 555
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E +L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 556 RDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELC 615
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K+L+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLIL
Sbjct: 616 KSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLIL 675
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE- 606
LDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D
Sbjct: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSSDDSPE 735
Query: 607 ---IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + +
Sbjct: 736 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLK 795
Query: 664 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
L +S AA + N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 796 LVVSDAAFDLLGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFVN 843
>gi|145640973|ref|ZP_01796555.1| DNA polymerase I [Haemophilus influenzae R3021]
gi|145274487|gb|EDK14351.1| DNA polymerase I [Haemophilus influenzae 22.4-21]
Length = 708
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/669 (61%), Positives = 545/669 (81%), Gaps = 6/669 (0%)
Query: 18 QQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVG 77
Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVLIGEPGVG
Sbjct: 4 QNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVG 63
Query: 78 KTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQK 137
KTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E+S +
Sbjct: 64 KTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEG 123
Query: 138 DIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFER 197
+I+FIDE+HTM+GTGK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIEKDAA ER
Sbjct: 124 RVILFIDEIHTMVGTGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALER 183
Query: 198 RFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAI 257
RFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAI
Sbjct: 184 RFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAI 243
Query: 258 DLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKL 317
DLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL +++KE+ +
Sbjct: 244 DLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEK 303
Query: 318 EIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLER 377
E +YA LE++WK EK + SQ IK+E++ V+ ++ +A R D +S+L+YG + LE+
Sbjct: 304 EREYAELEEVWKSEKATLSGSQHIKQELDTVKTELEQARRAGDLAKMSELQYGRIPDLEK 363
Query: 378 ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 437
L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EKLL +E+
Sbjct: 364 QLEQAET------SEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDE 417
Query: 438 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 497
L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++
Sbjct: 418 LHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDS 477
Query: 498 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 557
E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA++D
Sbjct: 478 EDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHAD 537
Query: 558 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVK 617
VFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K VM+ V
Sbjct: 538 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVS 597
Query: 618 IYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNI 677
+FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A L I +
Sbjct: 598 QHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEV 657
Query: 678 GFDLIYGAR 686
G+D IYGAR
Sbjct: 658 GYDPIYGAR 666
>gi|153834659|ref|ZP_01987326.1| chaperone ClpB [Vibrio harveyi HY01]
gi|148868911|gb|EDL67969.1| chaperone ClpB [Vibrio harveyi HY01]
Length = 857
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/677 (61%), Positives = 549/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N+ E +YA LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 NEELNEKEREYAELEEVWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L +L + L++S+
Sbjct: 739 NEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|307263757|ref|ZP_07545363.1| hypothetical protein appser13_11680 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|306870878|gb|EFN02616.1| hypothetical protein appser13_11680 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 857
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/716 (57%), Positives = 573/716 (80%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLAEAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L +++I +IA IQL L +L + ++ ++ +A
Sbjct: 739 VVMSVVGQHFRPEFINRIDETVVFHPLGQEHIRAIARIQLQRLIARLAERGYEVTVTDSA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I GFD ++GAR + K+++ L ++P + I G L+ P +D
Sbjct: 799 LDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVVD 846
>gi|375130115|ref|YP_004992214.1| clpB protein [Vibrio furnissii NCTC 11218]
gi|315179288|gb|ADT86202.1| clpB protein [Vibrio furnissii NCTC 11218]
Length = 857
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/718 (58%), Positives = 563/718 (78%), Gaps = 15/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS RY+SDR
Sbjct: 325 KDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSNRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLNIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++W EK + +Q IK E+E+ RL + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWNAEKAALSGTQHIKSELEQARLDLEVARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPV+K+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVAKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L +RV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHQRVIGQVEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFASLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L R++I SIA+IQL L+ +LL+ + +L++S
Sbjct: 739 EQVMEVVSKHFRPEFLNRVDETVVFHPLGREHIKSIASIQLERLRKRLLEKDFELQVSDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
AL I+ +GFD +YGAR + K+++ + + ++P A I G + P LD
Sbjct: 799 ALDLIAQVGFDPVYGARPL---KRAI-----QQNVENPLAKSILAGTFLPGTPIKLDV 848
>gi|307257140|ref|ZP_07538912.1| hypothetical protein appser10_11400 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306864302|gb|EFM96213.1| hypothetical protein appser10_11400 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 857
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/716 (57%), Positives = 573/716 (80%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLAEAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L +++I +IA IQL L +L + ++ ++ +A
Sbjct: 739 VVMSVVGQHFRPEFINRIDETVVFHPLGQEHIRAIARIQLQRLIARLAERGYEVTVTDSA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I GFD ++GAR + K+++ L ++P + I G L+ P +D
Sbjct: 799 LDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVVD 846
>gi|320157323|ref|YP_004189702.1| ClpB protein [Vibrio vulnificus MO6-24/O]
gi|319932635|gb|ADV87499.1| ClpB protein [Vibrio vulnificus MO6-24/O]
Length = 857
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/677 (61%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDQNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N+ E ++A LE+IW EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELNEKEREFAELEEIWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLLK KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L + +I SIA IQL L N++ + L++S
Sbjct: 739 EQVMEVVTKHFRPEFLNRVDETVVFHPLGQDHIKSIAAIQLKRLANRMEEHGYQLEVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ I+ +GFD +YGAR
Sbjct: 799 ALELIAQVGFDPVYGAR 815
>gi|343492233|ref|ZP_08730606.1| chaperone ClpB protein [Vibrio nigripulchritudo ATCC 27043]
gi|342827573|gb|EGU61961.1| chaperone ClpB protein [Vibrio nigripulchritudo ATCC 27043]
Length = 858
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/677 (61%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVEDPHAEDKRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+D++S KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALVNEHDDASSKRLKAL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E Y+ LE+IWK EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 NSELEEKERDYSELEEIWKAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLLK KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLKNKVSDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQQEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLDYDGMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L +++I SIA+IQL L N++ + +L++S+
Sbjct: 739 EEVMEVVSKHFRPEFLNRVDESVVFHPLGKEHIKSIASIQLTRLGNRMAEKGYELEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL IS +GFD +YGAR
Sbjct: 799 ALDLISEVGFDPVYGAR 815
>gi|417841857|ref|ZP_12487955.1| Chaperone protein ClpB [Haemophilus haemolyticus M19501]
gi|341948231|gb|EGT74862.1| Chaperone protein ClpB [Haemophilus haemolyticus M19501]
Length = 856
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQKVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRIILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++D+FNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADIFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|148826496|ref|YP_001291249.1| ATP-dependent chaperone ClpB [Haemophilus influenzae PittEE]
gi|229845911|ref|ZP_04466023.1| ClpB [Haemophilus influenzae 7P49H1]
gi|148716656|gb|ABQ98866.1| ClpB [Haemophilus influenzae PittEE]
gi|229810915|gb|EEP46632.1| ClpB [Haemophilus influenzae 7P49H1]
Length = 856
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELVEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP SF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPISSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|167856244|ref|ZP_02478978.1| chaperone ClpB [Haemophilus parasuis 29755]
gi|167852631|gb|EDS23911.1| chaperone ClpB [Haemophilus parasuis 29755]
Length = 857
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 558/677 (82%), Gaps = 5/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRR +QVLQRR+KNNPVL
Sbjct: 143 GGESVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRTVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++ E +YA LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEDLTAREREYAELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L+E +++ + N LL+TKV EEIAE++S+ +GIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLQEAVKREEEGGEN----HLLRTKVTDEEIAEVLSKASGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQSEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDQDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E E + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENAENMSYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VMN V +FRPEFINRID+ +VF L+++NI +IA IQL L ++ + ++ ++ A
Sbjct: 739 TIVMNVVGQHFRPEFINRIDETVVFHPLDKENIRAIARIQLERLIKRMAERGYEVTVTDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+ I GFD ++GAR
Sbjct: 799 AVDHIGEAGFDPLFGAR 815
>gi|223041973|ref|ZP_03612157.1| chaperone ClpB [Actinobacillus minor 202]
gi|223017230|gb|EEF15658.1| chaperone ClpB [Actinobacillus minor 202]
Length = 857
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/716 (57%), Positives = 568/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + +Q EE L+KYTIDLTE+AR GKLDPVIGRD+EIRR +QVLQRR+KNNPVL
Sbjct: 143 GGEKVNNQNAEETRQALQKYTIDLTERARAGKLDPVIGRDEEIRRTVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+ + +A R+S+ + + +L+YG
Sbjct: 443 DEELTAKEREYSELEEVWKAEKSALLGTQHIKTELENARIALEQARRESNLEKMGELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L+E +++ + +N LL+TKV EEIAE++S+ TGIPVSK+++ E++K
Sbjct: 503 KIPALEKQLQEAVKREEEGGDN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +EN+L RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMENVLHTRVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+EM +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPNASYGELKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L +++I SIA IQL L ++ + ++ I+ AA
Sbjct: 739 VVMSVVSQHFRPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRMAERGYEVTITDAA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
+ I GFD +GAR + K+++ L ++P A I G L+ P +D
Sbjct: 799 IDHIGKAGFDPFFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNKPVVVD 846
>gi|240949095|ref|ZP_04753443.1| ATP-dependant Clp protease chain B [Actinobacillus minor NM305]
gi|240296490|gb|EER47122.1| ATP-dependant Clp protease chain B [Actinobacillus minor NM305]
Length = 857
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/716 (57%), Positives = 569/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + +Q EE L+KYTIDLTE+AR GKLDPVIGRD+EIRR +QVLQRR+KNNPVL
Sbjct: 143 GGEKVNNQNAEETRQALQKYTIDLTERARAGKLDPVIGRDEEIRRTVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+ + +A R+S+ + + +L+YG
Sbjct: 443 DEELTAKEREYSELEEVWKAEKSALLGTQHIKTELENARIALEQARRESNLEKMGELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L+E +++ + +N LL+TKV EEIAE++S+ TGIPVSK+++ E++K
Sbjct: 503 KIPALEKQLQEAVKREEEGGDN----HLLRTKVTDEEIAEVLSKATGIPVSKMIEGEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +EN+L RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMENVLHTRVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+EM +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPNASYGELKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L +++I SIA IQL L ++ + ++ I+ AA
Sbjct: 739 VVMSVVSQHFRPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRMAERGYEVTITDAA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
+ I GFD ++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 799 IDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVVD 846
>gi|285017507|ref|YP_003375218.1| ATP-dependent clp protease subunit protein [Xanthomonas albilineans
GPE PC73]
gi|283472725|emb|CBA15230.1| putative atp-dependent clp protease subunit protein [Xanthomonas
albilineans GPE PC73]
Length = 861
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/680 (60%), Positives = 553/680 (81%), Gaps = 10/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ E+ L KYTIDLT +A GKLDPVIGRD+EIRR +QVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEDQRQALGKYTIDLTARAESGKLDPVIGRDEEIRRTVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S N+ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLSDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++ +L+++WK EK ++ + +IKE+IE+ R+++ A R+ D+ +S+++YG
Sbjct: 445 EADIDKLEREFYDLDEVWKSEKAALQGATKIKEQIEQARVELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L LE+ L ++ + ++F L++ +V +EEIAE+VSR TGIPV+K+++ ER+K
Sbjct: 505 LLPNLEKQLAAANEAE------QHEFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQ EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDELHQRVVGQHEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE
Sbjct: 619 AEFLFDSSDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTESVRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE---- 606
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ D
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYT 738
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K AVM V+ +FRPEFINR+DDI+VF L++ I +IA IQL+ L+ +L + + +++
Sbjct: 739 QMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKAIARIQLHGLEKRLAERGLKIEL 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
AL+ + N+GFD +YGAR
Sbjct: 799 GDRALELLGNVGFDPVYGAR 818
>gi|254524598|ref|ZP_05136653.1| ATP-dependent chaperone ClpB [Stenotrophomonas sp. SKA14]
gi|219722189|gb|EED40714.1| ATP-dependent chaperone ClpB [Stenotrophomonas sp. SKA14]
Length = 859
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/716 (58%), Positives = 563/716 (78%), Gaps = 24/716 (3%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 143 GGENVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 263 DLAKSEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 323 KDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++RL +
Sbjct: 383 QLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+ LE ++++L +IWK EK ++ + +IKE++E+ +L + A R+ D+ +S+++YG
Sbjct: 443 ENDIDALEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLDLESAQRRQDFARMSEIQYG 502
Query: 371 ELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ L +E KD F L++ +V EEIAE+VSR TGIPV+K+++ E
Sbjct: 503 LLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E +L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 554 RDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELC 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K+L+ +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLIL
Sbjct: 614 KSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLIL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE- 606
LDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M D
Sbjct: 674 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSADDSPE 733
Query: 607 ---IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L+++ I IA IQ+ L+ +L + +
Sbjct: 734 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLK 793
Query: 664 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
L +S AA + N+GFD +YGAR + K+++ L ++P A I G +N
Sbjct: 794 LVVSDAAFDLLGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFVN 841
>gi|251793445|ref|YP_003008174.1| ATP-dependent chaperone ClpB [Aggregatibacter aphrophilus NJ8700]
gi|422337408|ref|ZP_16418379.1| chaperone ClpB [Aggregatibacter aphrophilus F0387]
gi|247534841|gb|ACS98087.1| ATP-dependent chaperone ClpB [Aggregatibacter aphrophilus NJ8700]
gi|353345435|gb|EHB89730.1| chaperone ClpB [Aggregatibacter aphrophilus F0387]
Length = 856
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/716 (58%), Positives = 563/716 (78%), Gaps = 14/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + +LL+ +V EEIAE++SR TGIPVSK+++ E+EK
Sbjct: 505 KIPELEKQLAAAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ + +K
Sbjct: 679 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNQEESYDEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF LN+ NI +IA IQL L N++ L +
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLNKDNIRAIAEIQLKRLINRMESRGYVLHFTDDT 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L IS IG+D IYGAR + K+++ + ++P A I G L+ + P ++D
Sbjct: 799 LNFISEIGYDPIYGARPL---KRAIQQEI-----ENPLAQQILSGSLLPEKPITVD 846
>gi|418354585|ref|ZP_12957307.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-61A1]
gi|421328011|ref|ZP_15778526.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1042(15)]
gi|423159453|ref|ZP_17146425.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-33A2]
gi|424655872|ref|ZP_18093174.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A2]
gi|443534469|ref|ZP_21100381.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-80A1]
gi|356450009|gb|EHI02745.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-33A2]
gi|356453839|gb|EHI06499.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-61A1]
gi|395930596|gb|EJH41343.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1042(15)]
gi|408056911|gb|EKG91782.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A2]
gi|443462473|gb|ELT33512.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-80A1]
Length = 823
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 111 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 291 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 411 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 471 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 525 LLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 585 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 705 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 765 ALDLIAHVGFDPVYGAR 781
>gi|389781121|ref|ZP_10194528.1| ATP-dependent chaperone ClpB [Rhodanobacter spathiphylli B39]
gi|388435401|gb|EIL92308.1| ATP-dependent chaperone ClpB [Rhodanobacter spathiphylli B39]
Length = 863
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/682 (60%), Positives = 547/682 (80%), Gaps = 12/682 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KY IDLTE+A KLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVQSENAEEQRQALEKYCIDLTERAERNKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRII GEVP L +++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKQEGRVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D SK+RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++++L +IWK EK ++ + ++KE+IE+ ++ A R+ D+ +S+++YG
Sbjct: 445 ETDIDKLEREFSDLNEIWKSEKASLQGTTRVKEQIEQAHQELESAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L + Q F L++TKV +EEIAE+V+R TGIPVSK+++ ER+K
Sbjct: 505 KLPELEKQLAAAQAAETQ------DFKLVQTKVTAEEIAEVVARWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRVVGQDEA+ AV++AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEDELHKRVVGQDEAVHAVADAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFMFDTTDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKE-- 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++ + GD E
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDASENGGDAEEQ 738
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K +VM V+ +FRPEFINR+D+I+VFR L++ I +IA IQL L+ +L + + L
Sbjct: 739 YTQMKASVMGVVQAHFRPEFINRLDEIVVFRPLDKAQIRAIAKIQLQYLERRLAERQLKL 798
Query: 665 KISKAALKKISNIGFDLIYGAR 686
++ AL + N+GFD +YGAR
Sbjct: 799 DVADDALALLGNVGFDPVYGAR 820
>gi|431925903|ref|YP_007238937.1| ATP-dependent chaperone ClpB [Pseudomonas stutzeri RCH2]
gi|431824190|gb|AGA85307.1| ATP-dependent chaperone ClpB [Pseudomonas stutzeri RCH2]
Length = 854
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNDLSKQEGRVI 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KL +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLARE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQIQEL-VGDPGAQRAAVMDAVAHHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I IA+IQL L+ +L + + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAERELSLELSQEAMDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|431800678|ref|YP_007227581.1| ATPase [Pseudomonas putida HB3267]
gi|430791443|gb|AGA71638.1| ATPase [Pseudomonas putida HB3267]
Length = 854
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI++LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIDRLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
YA+LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YADLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ+EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQNEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGSHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|319775209|ref|YP_004137697.1| protein disaggregation chaperone [Haemophilus influenzae F3047]
gi|317449800|emb|CBY86008.1| protein disaggregation chaperone [Haemophilus influenzae F3047]
Length = 856
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/676 (60%), Positives = 545/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L +
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDDL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|114561854|ref|YP_749367.1| ATPase [Shewanella frigidimarina NCIMB 400]
gi|114333147|gb|ABI70529.1| ATPase AAA-2 domain protein [Shewanella frigidimarina NCIMB 400]
Length = 865
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 153 GGQKVDDPNAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 212
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 213 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLN 272
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 273 ELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 332
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RYISDR
Sbjct: 333 KDAALERRFQKVIVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYISDR 392
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE++D+LERR IQLK+E +A+ +E DE+S+KRL +
Sbjct: 393 KLPDKAIDLIDEAASSIRMQIDSKPEVLDRLERRAIQLKLEEQALSKESDEASRKRLEFL 452
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ +E K A + +IW EK + +Q IK ++E+ R+ + A R D +S+L+YG
Sbjct: 453 QHELRDVESKAAEMNEIWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYG 512
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREK
Sbjct: 513 RIPELEKQLDLASQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLEGEREK 566
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L +RV+GQ+EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L
Sbjct: 567 LLHMETALHERVIGQNEAVDAVSNAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSL 626
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 627 AKFLFDSESALVRIDMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 686
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E E +K
Sbjct: 687 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEGFGHTSYEEMK 746
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VMN V FRPEF+NRID+ +VF L+ +NI IA+IQ +L+ +L++ D+++S A
Sbjct: 747 AGVMNVVTQSFRPEFLNRIDESVVFHPLDAENIKHIASIQFELLRKRLIEKEFDIELSDA 806
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 807 ALSLIAEAGFDPVYGAR 823
>gi|147675005|ref|YP_001216203.1| clpB protein [Vibrio cholerae O395]
gi|227117086|ref|YP_002818982.1| clpB protein [Vibrio cholerae O395]
gi|262170007|ref|ZP_06037697.1| ClpB protein [Vibrio cholerae RC27]
gi|146316888|gb|ABQ21427.1| clpB protein [Vibrio cholerae O395]
gi|227012536|gb|ACP08746.1| clpB protein [Vibrio cholerae O395]
gi|262021741|gb|EEY40452.1| ClpB protein [Vibrio cholerae RC27]
Length = 857
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVYDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|386288476|ref|ZP_10065617.1| ATPase [gamma proteobacterium BDW918]
gi|385278492|gb|EIF42463.1| ATPase [gamma proteobacterium BDW918]
Length = 862
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/693 (61%), Positives = 558/693 (80%), Gaps = 14/693 (2%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+K +LN G+++ EE L KYTIDLTE+A GKLDPVIGRDDEIRR
Sbjct: 130 GVKKGALNAAIDKVRGGQSVDDASAEESRQALDKYTIDLTERAESGKLDPVIGRDDEIRR 189
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
IQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ LLAG
Sbjct: 190 TIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDLGALLAGA 249
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
K+RG+FE+RLK +L E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELH
Sbjct: 250 KFRGDFEERLKAVLNELSKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELH 309
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
C+GATTLNEYRQ IEKDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHHGV+ITD A
Sbjct: 310 CVGATTLNEYRQSIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHGVDITDSA 369
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
I+AA++LS RYI+DR +PDKAIDLIDEAA++I++EIDSKPE+MDKLERRLIQLKI+ EA+
Sbjct: 370 IIAATKLSQRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVMDKLERRLIQLKIQREAV 429
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
K++ D ++KK+L ++ +I+K+E ++++L +IWK EK ++ S QIK ++E+ +L++ A
Sbjct: 430 KKDDDLAAKKQLEILNADISKVEKEFSDLNEIWKGEKAALQGSAQIKVDLEQAKLELETA 489
Query: 356 TRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRT 415
R D +S+L+YG++ +LE+ L D LL+ KV EE+AE+VSR
Sbjct: 490 RRAGDLTRMSELQYGKIPELEKQLATADAVD------HGAMQLLRNKVSEEEVAEVVSRW 543
Query: 416 TGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMF 475
TGIP+SK+++ ER+KLL +E+ L +RV+GQ EA+ AVSNA+RRSR+GLSD RP GSF+F
Sbjct: 544 TGIPISKMLEGERDKLLRMEDELHQRVIGQSEAVDAVSNAVRRSRAGLSDPNRPNGSFLF 603
Query: 476 LGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLT 535
LGPTGVGKTELCK LS ++++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLT
Sbjct: 604 LGPTGVGKTELCKALSMFLYDSEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLT 663
Query: 536 EIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSD 595
E VRR+PYSL+LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD
Sbjct: 664 EAVRRRPYSLLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSD 723
Query: 596 KIKEMEKGDKEIIKL--AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNIL 653
I+EM E K+ AV+N V +FRPEFINRID+++VF L+R + +IA IQL IL
Sbjct: 724 VIQEMTVAGSEYPKIRDAVLNVVSGHFRPEFINRIDELVVFEPLDRTQVQAIAGIQLGIL 783
Query: 654 KNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
++L + + L++S+ AL ++++IGFD +YGAR
Sbjct: 784 NSRLAERELRLEVSEEALDRLADIGFDPVYGAR 816
>gi|153829376|ref|ZP_01982043.1| clpB protein, partial [Vibrio cholerae 623-39]
gi|148875159|gb|EDL73294.1| clpB protein [Vibrio cholerae 623-39]
Length = 839
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|153801889|ref|ZP_01956475.1| clpB protein [Vibrio cholerae MZO-3]
gi|229519981|ref|ZP_04409411.1| ClpB protein [Vibrio cholerae TM 11079-80]
gi|421353515|ref|ZP_15803848.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-45]
gi|124122600|gb|EAY41343.1| clpB protein [Vibrio cholerae MZO-3]
gi|229343033|gb|EEO08021.1| ClpB protein [Vibrio cholerae TM 11079-80]
gi|395954862|gb|EJH65471.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-45]
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|424032097|ref|ZP_17771518.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-01]
gi|408876509|gb|EKM15626.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-01]
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/677 (61%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+N+ E +YA LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 NDELNEKEREYAELEEVWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L +L + ++S
Sbjct: 739 NEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQFEVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|261212183|ref|ZP_05926469.1| ClpB protein [Vibrio sp. RC341]
gi|260838791|gb|EEX65442.1| ClpB protein [Vibrio sp. RC341]
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|333892371|ref|YP_004466246.1| ClpB protein [Alteromonas sp. SN2]
gi|332992389|gb|AEF02444.1| ClpB protein [Alteromonas sp. SN2]
Length = 858
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/693 (60%), Positives = 556/693 (80%), Gaps = 15/693 (2%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+K+T DLTE+A GKLDPVIGRDDEIRRA+QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+F+DEL
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK++V+E
Sbjct: 281 HTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVVVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I+I+IDSKPE MD+LERR+IQLK+E +A+ +E D++S KRL +I+ E + E KY + EK
Sbjct: 401 IRIQIDSKPEDMDRLERRIIQLKLEEQALAKETDDASHKRLEMIELEREQAETKYNDFEK 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+W EK ++ +Q IK +E+ +L + A R SD +S+L+YG + +LE L+ S+
Sbjct: 461 VWLDEKEAMQGTQTIKSALEQAKLDLEIARRASDLNRMSELQYGRIPELEAKLERASE-- 518
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
N + L+K KV EIA+++SR TGIPV+K+++ ER+KLL +E++L KRVVGQ
Sbjct: 519 ----NETRETKLVKNKVTEVEIADVLSRWTGIPVAKMLEGERDKLLKMEDVLHKRVVGQG 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ E++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+E+HS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMERHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK-EMEKGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+NT+++MTSNLGSD I+ + E+ E +K +VM+ V +FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQNQHEESQYEEMKASVMSVVGQHFRPEFI 754
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+DDI+VF L + I SIA IQL L+ +L++ L +S AA+ K+++ GFD +YGA
Sbjct: 755 NRVDDIVVFHPLGKDEIKSIAKIQLAALRARLVEKGYKLNLSGAAMDKLADAGFDPVYGA 814
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
R + K+++ ++H ++P A + GDL+
Sbjct: 815 RPL---KRAI-----QVHIENPLAQKLLSGDLV 839
>gi|15640730|ref|NP_230360.1| clpB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121587768|ref|ZP_01677528.1| clpB protein [Vibrio cholerae 2740-80]
gi|227080891|ref|YP_002809442.1| clpB protein [Vibrio cholerae M66-2]
gi|229505671|ref|ZP_04395181.1| ClpB protein [Vibrio cholerae BX 330286]
gi|229508756|ref|ZP_04398249.1| ClpB protein [Vibrio cholerae B33]
gi|229519494|ref|ZP_04408937.1| ClpB protein [Vibrio cholerae RC9]
gi|229608689|ref|YP_002879337.1| ClpB protein [Vibrio cholerae MJ-1236]
gi|254851041|ref|ZP_05240391.1| chaperone protein clpB [Vibrio cholerae MO10]
gi|255743832|ref|ZP_05417788.1| ClpB protein [Vibrio cholera CIRS 101]
gi|262156051|ref|ZP_06029170.1| ClpB protein [Vibrio cholerae INDRE 91/1]
gi|360034620|ref|YP_004936383.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae O1 str.
2010EL-1786]
gi|379740566|ref|YP_005332535.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae IEC224]
gi|417812757|ref|ZP_12459416.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-49A2]
gi|417815624|ref|ZP_12462257.1| ATP-dependent chaperone ClpB [Vibrio cholerae HCUF01]
gi|418331759|ref|ZP_12942700.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-06A1]
gi|418336179|ref|ZP_12945080.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-23A1]
gi|418343016|ref|ZP_12949811.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-28A1]
gi|418348183|ref|ZP_12952918.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43A1]
gi|419825177|ref|ZP_14348683.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1033(6)]
gi|421315766|ref|ZP_15766338.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1032(5)]
gi|421319565|ref|ZP_15770124.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1038(11)]
gi|421330936|ref|ZP_15781418.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1046(19)]
gi|421334605|ref|ZP_15785073.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1048(21)]
gi|421338497|ref|ZP_15788933.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-20A2]
gi|421345598|ref|ZP_15795984.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-46A1]
gi|422890818|ref|ZP_16933229.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-40A1]
gi|422901693|ref|ZP_16937056.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48A1]
gi|422905918|ref|ZP_16940763.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-70A1]
gi|422912513|ref|ZP_16947039.1| ATP-dependent chaperone ClpB [Vibrio cholerae HFU-02]
gi|422924996|ref|ZP_16958026.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-38A1]
gi|423144316|ref|ZP_17131930.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-19A1]
gi|423148968|ref|ZP_17136327.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-21A1]
gi|423152813|ref|ZP_17140011.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-22A1]
gi|423155618|ref|ZP_17142731.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-32A1]
gi|423164139|ref|ZP_17150926.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48B2]
gi|423730272|ref|ZP_17703590.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A1]
gi|423748838|ref|ZP_17711602.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-50A2]
gi|423891990|ref|ZP_17725677.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-62A1]
gi|423926765|ref|ZP_17730293.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-77A1]
gi|424001320|ref|ZP_17744409.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A2]
gi|424005476|ref|ZP_17748460.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-37A1]
gi|424023486|ref|ZP_17763150.1| ATP-dependent chaperone protein ClpB, partial [Vibrio cholerae
HC-62B1]
gi|424026290|ref|ZP_17765906.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-69A1]
gi|424585615|ref|ZP_18025209.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1030(3)]
gi|424598175|ref|ZP_18037373.1| ATP-dependent chaperone ClpB [Vibrio Cholerae CP1044(17)]
gi|424600929|ref|ZP_18040086.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1047(20)]
gi|424605908|ref|ZP_18044873.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1050(23)]
gi|424609742|ref|ZP_18048600.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-39A1]
gi|424612543|ref|ZP_18051350.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-41A1]
gi|424616366|ref|ZP_18055057.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-42A1]
gi|424621302|ref|ZP_18059830.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-47A1]
gi|424644280|ref|ZP_18082034.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-56A2]
gi|424651923|ref|ZP_18089447.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-57A2]
gi|440709003|ref|ZP_20889663.1| ClpB protein [Vibrio cholerae 4260B]
gi|443502818|ref|ZP_21069807.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-64A1]
gi|443506731|ref|ZP_21073521.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-65A1]
gi|443510838|ref|ZP_21077502.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-67A1]
gi|443514400|ref|ZP_21080939.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-68A1]
gi|443518213|ref|ZP_21084630.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-71A1]
gi|443523080|ref|ZP_21089320.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-72A2]
gi|443530710|ref|ZP_21096726.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-7A1]
gi|443538060|ref|ZP_21103916.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A1]
gi|449053972|ref|ZP_21732640.1| ClpB protein [Vibrio cholerae O1 str. Inaba G4222]
gi|54035907|sp|Q9KU18.1|CLPB_VIBCH RecName: Full=Chaperone protein ClpB
gi|9655153|gb|AAF93876.1| clpB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547995|gb|EAX58075.1| clpB protein [Vibrio cholerae 2740-80]
gi|227008779|gb|ACP04991.1| clpB protein [Vibrio cholerae M66-2]
gi|229344183|gb|EEO09158.1| ClpB protein [Vibrio cholerae RC9]
gi|229354280|gb|EEO19210.1| ClpB protein [Vibrio cholerae B33]
gi|229357894|gb|EEO22811.1| ClpB protein [Vibrio cholerae BX 330286]
gi|229371344|gb|ACQ61767.1| ClpB protein [Vibrio cholerae MJ-1236]
gi|254846746|gb|EET25160.1| chaperone protein clpB [Vibrio cholerae MO10]
gi|255738463|gb|EET93852.1| ClpB protein [Vibrio cholera CIRS 101]
gi|262030087|gb|EEY48732.1| ClpB protein [Vibrio cholerae INDRE 91/1]
gi|340042924|gb|EGR03887.1| ATP-dependent chaperone ClpB [Vibrio cholerae HCUF01]
gi|340043218|gb|EGR04178.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-49A2]
gi|341625017|gb|EGS50490.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-70A1]
gi|341626188|gb|EGS51594.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48A1]
gi|341626667|gb|EGS52030.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-40A1]
gi|341640689|gb|EGS65270.1| ATP-dependent chaperone ClpB [Vibrio cholerae HFU-02]
gi|341648353|gb|EGS72417.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-38A1]
gi|356420482|gb|EHH74008.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-06A1]
gi|356421196|gb|EHH74701.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-21A1]
gi|356426019|gb|EHH79358.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-19A1]
gi|356433702|gb|EHH86889.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-23A1]
gi|356434213|gb|EHH87395.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-22A1]
gi|356437743|gb|EHH90829.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-28A1]
gi|356442787|gb|EHH95622.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-32A1]
gi|356447761|gb|EHI00549.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43A1]
gi|356456276|gb|EHI08885.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48B2]
gi|356645774|gb|AET25829.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae O1 str.
2010EL-1786]
gi|378794076|gb|AFC57547.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae IEC224]
gi|395922507|gb|EJH33323.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1032(5)]
gi|395925890|gb|EJH36687.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1038(11)]
gi|395934789|gb|EJH45527.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1046(19)]
gi|395937398|gb|EJH48117.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1048(21)]
gi|395944933|gb|EJH55605.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-20A2]
gi|395948543|gb|EJH59188.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-46A1]
gi|395962410|gb|EJH72709.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-56A2]
gi|395963603|gb|EJH73866.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-57A2]
gi|395966424|gb|EJH76549.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-42A1]
gi|395974598|gb|EJH84123.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-47A1]
gi|395977461|gb|EJH86871.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1030(3)]
gi|395979149|gb|EJH88513.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1047(20)]
gi|408009468|gb|EKG47374.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-39A1]
gi|408016239|gb|EKG53793.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-41A1]
gi|408044616|gb|EKG80522.1| ATP-dependent chaperone ClpB [Vibrio Cholerae CP1044(17)]
gi|408046325|gb|EKG82025.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1050(23)]
gi|408611448|gb|EKK84809.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1033(6)]
gi|408627125|gb|EKK99950.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A1]
gi|408640334|gb|EKL12129.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-50A2]
gi|408658151|gb|EKL29223.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-77A1]
gi|408659180|gb|EKL30235.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-62A1]
gi|408848198|gb|EKL88251.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-37A1]
gi|408849139|gb|EKL89172.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A2]
gi|408873240|gb|EKM12442.1| ATP-dependent chaperone protein ClpB, partial [Vibrio cholerae
HC-62B1]
gi|408881203|gb|EKM20113.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-69A1]
gi|439975744|gb|ELP51856.1| ClpB protein [Vibrio cholerae 4260B]
gi|443432938|gb|ELS75459.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-64A1]
gi|443436762|gb|ELS82879.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-65A1]
gi|443440325|gb|ELS90014.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-67A1]
gi|443444420|gb|ELS97694.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-68A1]
gi|443448255|gb|ELT04890.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-71A1]
gi|443451030|gb|ELT11294.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-72A2]
gi|443458911|gb|ELT26306.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-7A1]
gi|443466493|gb|ELT41151.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A1]
gi|448266545|gb|EMB03772.1| ClpB protein [Vibrio cholerae O1 str. Inaba G4222]
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|386389403|ref|ZP_10074219.1| ATP-dependent chaperone protein ClpB [Haemophilus
paraphrohaemolyticus HK411]
gi|385695782|gb|EIG26333.1| ATP-dependent chaperone protein ClpB [Haemophilus
paraphrohaemolyticus HK411]
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/676 (60%), Positives = 555/676 (82%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGETVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAAVLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+IWK EK+ + +Q IK E+E R+ +++A R+++++ +S+L+YG
Sbjct: 443 DEELAAKEREYSELEEIWKAEKSALLGTQHIKTELENARIAMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L+E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLQEAVKREEEGGEN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ +VFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+EM + +K
Sbjct: 679 VEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPEATYGELKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L +++I SIA IQL L ++ + ++ I+ AA
Sbjct: 739 VVMSVVSQHFRPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRMAERGYEVTITDAA 798
Query: 671 LKKISNIGFDLIYGAR 686
+ I GFD ++GAR
Sbjct: 799 INHIGKAGFDPLFGAR 814
>gi|425901645|ref|ZP_18878236.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397893034|gb|EJL09510.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 854
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/677 (62%), Positives = 552/677 (81%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDANV-----EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+++EI +LE +YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+Y
Sbjct: 444 LQEEITRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 GVIPDLERSLQMVDQ------HGQSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+LL +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID++++F L R I I IQL L+++L + + L++S
Sbjct: 737 AAVMDAVSTHFRPEFINRIDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLELSGE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|255022127|ref|ZP_05294130.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340782895|ref|YP_004749502.1| ClpB protein [Acidithiobacillus caldus SM-1]
gi|254968391|gb|EET25950.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340557046|gb|AEK58800.1| ClpB protein [Acidithiobacillus caldus SM-1]
Length = 865
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 558/677 (82%), Gaps = 3/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L+KYT+D TE+A GKLDPVIGRDDEIRR IQVL RRSKNNPVL
Sbjct: 145 GGEKINDPNAEEQRQALEKYTLDYTERAAQGKLDPVIGRDDEIRRTIQVLLRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLGLDLGALIAGAKFRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLAKAEGKIILFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQ++LV+EP +E+TI+ILRGL+++YE HHGV ITDPA+VAA++LS+RYISDR
Sbjct: 325 KDAALERRFQRVLVDEPSVEDTIAILRGLKERYEAHHGVRITDPALVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++IK+EIDSKPE +D+LERRLIQL IE A+ +E DE+S+KRL +
Sbjct: 385 NLPDKAIDLVDEAASRIKMEIDSKPEELDELERRLIQLNIEKVALAKEKDEASRKRLENL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I +L+ KY LE+IWK EK I+ + QI++E++++R++++ A R +D + +++++YG
Sbjct: 445 ESQIAELQRKYQELEEIWKSEKLAIEGTSQIQKELDRLRVELDNARRANDLERMAQIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE L+E +++ A TLL+T+V EEIAE++SR TGIPVSK+++ E+EK
Sbjct: 505 QIPALEAKLREAEKQEADGQRKAP--TLLRTEVTEEEIAEVISRWTGIPVSKMLEGEKEK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQDEA++AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTEL K L
Sbjct: 563 LLKMEERLRARVVGQDEAVTAVANAIRRSRAGLADPRRPIGSFLFLGPTGVGKTELTKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 623 AEFLFDSEDHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIK 609
+EKA+ +VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E + GD E ++
Sbjct: 683 VEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEYGRLGDVEGMR 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V+ +FRPEF+NRID++++F+ L+R+ + +IA IQ+ L+ +L + ++D+ +S A
Sbjct: 743 GAVMEVVQGHFRPEFLNRIDELVIFQPLSRQQLRAIAEIQMGSLRARLRERDLDIVLSDA 802
Query: 670 ALKKISNIGFDLIYGAR 686
A+ ++ GFD +YGAR
Sbjct: 803 AVNLLAETGFDPVYGAR 819
>gi|229525361|ref|ZP_04414766.1| ClpB protein [Vibrio cholerae bv. albensis VL426]
gi|229338942|gb|EEO03959.1| ClpB protein [Vibrio cholerae bv. albensis VL426]
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/677 (61%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I++IGFD +YGAR
Sbjct: 799 ALDLIAHIGFDPVYGAR 815
>gi|262191803|ref|ZP_06049974.1| ClpB protein [Vibrio cholerae CT 5369-93]
gi|262032290|gb|EEY50857.1| ClpB protein [Vibrio cholerae CT 5369-93]
Length = 857
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|399006617|ref|ZP_10709140.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM17]
gi|398121933|gb|EJM11544.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM17]
Length = 854
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/677 (62%), Positives = 551/677 (81%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDANV-----EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+++EI +LE +YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+Y
Sbjct: 444 LQEEITRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 GVIPDLERSLQMVDQ------HGQSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+LL +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID++++F L R I I IQL L+ +L + + L++S
Sbjct: 737 AAVMDAVSTHFRPEFINRIDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELKLELSGE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|383318057|ref|YP_005378899.1| ATP-dependent chaperone ClpB [Frateuria aurantia DSM 6220]
gi|379045161|gb|AFC87217.1| ATP-dependent chaperone ClpB [Frateuria aurantia DSM 6220]
Length = 860
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/680 (59%), Positives = 543/680 (79%), Gaps = 11/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KY +DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVQSENAEEQRQALEKYCVDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+ GEVP L +++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTLNEYRQYIE
Sbjct: 265 DLAKQEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIPDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +++E DE S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLRKEKDEESRRRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+ E +++L ++WK EK ++ + ++KE+IE RL + A R+ D+ +S+++YG
Sbjct: 445 ESDIDTEERVFSDLNEVWKSEKAALQGTTKVKEQIEAARLALETAQRQQDYARMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE+ L + Q F L++ +V +EEIAE+V+R TGIPV+K+++ EREK
Sbjct: 505 TLPELEKQLAAAQAAETQ------DFKLVQDRVTAEEIAEVVARWTGIPVAKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E +L +RVVGQDEA+ AVS+AIRR+R+GLSD RPYGSF+FLGPTGVGKTELCK L
Sbjct: 559 LLHMEQVLHERVVGQDEAVRAVSDAIRRARAGLSDPNRPYGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ADFLFDTQDAMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--- 607
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+E + GD E
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSSLIQE-QAGDSEADYV 737
Query: 608 -IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K +V+ V+ +FRPEFINR+D+++VFR L I +IA IQL L+ +L + + L++
Sbjct: 738 QMKASVLGVVQAHFRPEFINRLDELVVFRPLQSAQIRAIARIQLAGLEQRLAERQLKLEV 797
Query: 667 SKAALKKISNIGFDLIYGAR 686
+ AL+ + GFD +YGAR
Sbjct: 798 NDEALQLLGQAGFDPVYGAR 817
>gi|262163882|ref|ZP_06031621.1| ClpB protein [Vibrio mimicus VM223]
gi|262027410|gb|EEY46076.1| ClpB protein [Vibrio mimicus VM223]
Length = 823
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/677 (60%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 111 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 291 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 411 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 471 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 525 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 585 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 705 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDD 764
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 765 ALDLIAQVGFDPVYGAR 781
>gi|262401592|ref|ZP_06078158.1| ClpB protein [Vibrio sp. RC586]
gi|262352009|gb|EEZ01139.1| ClpB protein [Vibrio sp. RC586]
Length = 857
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSGRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|160871680|ref|ZP_02061812.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|160872386|ref|ZP_02062518.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|159120479|gb|EDP45817.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|159121185|gb|EDP46523.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
Length = 868
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/679 (62%), Positives = 546/679 (80%), Gaps = 10/679 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + E G L+KYTIDLT +A GKLDPVIGRDD IRR IQVLQRR+KNNPVL
Sbjct: 146 GGETVNDPEAEGRRGALEKYTIDLTTQASQGKLDPVIGRDDVIRRTIQVLQRRTKNNPVL 205
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTA+VEGLAQRI+N EVP L +K++L LDI L+AG KYRGEFE+RLK +L
Sbjct: 206 IGEPGVGKTAVVEGLAQRIVNHEVPEGLRNKRLLALDIGSLIAGAKYRGEFEERLKAVLN 265
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHCIGATTLNEYR YIE
Sbjct: 266 ELAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGQLHCIGATTLNEYRNYIE 325
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQKILV+EP++E+TI+ILRGL+++YE+HHGVEI D AIVAA+ LS+RYISDR
Sbjct: 326 KDAALERRFQKILVDEPNVEDTIAILRGLKQRYEIHHGVEIMDSAIVAAATLSHRYISDR 385
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I+IEIDSKPE +D+L+RRLIQLKIE EA+K+E DESSK RL +
Sbjct: 386 NLPDKAIDLIDEAASRIRIEIDSKPEKLDRLDRRLIQLKIEREALKKETDESSKIRLKNL 445
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
EI +L KYA+L +IWK EK ++ Q+IK E+EK + ++ KA R D +S+L+YG
Sbjct: 446 DNEITELSKKYADLNEIWKAEKATLQGEQKIKSELEKAQFELEKARRSGDLNRMSELQYG 505
Query: 371 ELNKLER--ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
+ LE+ + +K +K Q P L++ KV +EIAEIVS+ TGIPV+K+++ ER
Sbjct: 506 HIPALEKKLVAAQKIEKKEQ-P------ALIRNKVSEKEIAEIVSQWTGIPVAKMLEGER 558
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
EKLL +E+ L KRVVGQDEAIS V+NAIRRSR+GLSD RP GSF+F GPTGVGKTE+CK
Sbjct: 559 EKLLQMEDALHKRVVGQDEAISVVANAIRRSRAGLSDPNRPIGSFIFSGPTGVGKTEVCK 618
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F+++E+++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LL
Sbjct: 619 ALAGFLFDSDEAMVRLDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLL 678
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEI 607
DEIEKA++DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS I+E K D
Sbjct: 679 DEIEKAHADVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSQIIQEFTSKQDYAA 738
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
+K +M+ + +FRPEFINR+D+++VF LN I SI IQL L+ +L + ++ L++S
Sbjct: 739 LKSTLMDIIAQHFRPEFINRVDEVVVFHALNETQIHSITKIQLQRLRQRLGERDLHLEVS 798
Query: 668 KAALKKISNIGFDLIYGAR 686
+AA+ I+ +G+D +YGAR
Sbjct: 799 EAAINHIAKMGYDPVYGAR 817
>gi|421342009|ref|ZP_15792416.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43B1]
gi|395945512|gb|EJH56177.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43B1]
Length = 823
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 111 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 291 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 411 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 471 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 525 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 585 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 705 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 765 ALDLIAHVGFDPVYGAR 781
>gi|325577681|ref|ZP_08147956.1| chaperone protein ClpB [Haemophilus parainfluenzae ATCC 33392]
gi|325160426|gb|EGC72552.1| chaperone protein ClpB [Haemophilus parainfluenzae ATCC 33392]
Length = 856
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/676 (60%), Positives = 545/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQSVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE++ E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELSDKEREYAELEEVWKSEKAALSGSQHIKQELDAAKTEMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + +LL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLAAAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKNESYGEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L ++A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTEAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|229512401|ref|ZP_04401875.1| ClpB protein [Vibrio cholerae TMA 21]
gi|229350551|gb|EEO15497.1| ClpB protein [Vibrio cholerae TMA 21]
Length = 857
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|345428733|ref|YP_004821849.1| protein disaggregation chaperone [Haemophilus parainfluenzae T3T1]
gi|301154792|emb|CBW14255.1| protein disaggregation chaperone [Haemophilus parainfluenzae T3T1]
Length = 856
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/676 (60%), Positives = 545/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQSVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELADKEREYAELEEVWKSEKATLSGSQHIKQELDAAKTEMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + +LL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLAAAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKNESYGEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L+++NI +IA+IQL L ++ +L ++A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLDKENIRAIASIQLERLAKRMETRGYELVFTEAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|424809681|ref|ZP_18235058.1| clpB protein [Vibrio mimicus SX-4]
gi|342323169|gb|EGU18955.1| clpB protein [Vibrio mimicus SX-4]
Length = 823
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 111 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 291 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 411 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 471 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 525 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 585 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 705 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDD 764
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 765 ALDLIAQVGFDPVYGAR 781
>gi|350530312|ref|ZP_08909253.1| hypothetical protein VrotD_04277 [Vibrio rotiferianus DAT722]
Length = 857
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/677 (61%), Positives = 548/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N+ E +YA LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 NEELNEKEREYAELEEVWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L +L + L++S
Sbjct: 739 NEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|262172214|ref|ZP_06039892.1| ClpB protein [Vibrio mimicus MB-451]
gi|449144154|ref|ZP_21774971.1| chaperone ClpB [Vibrio mimicus CAIM 602]
gi|261893290|gb|EEY39276.1| ClpB protein [Vibrio mimicus MB-451]
gi|449080254|gb|EMB51171.1| chaperone ClpB [Vibrio mimicus CAIM 602]
Length = 857
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|260912679|ref|ZP_05919165.1| ATP-dependent chaperone ClpB [Pasteurella dagmatis ATCC 43325]
gi|260633057|gb|EEX51222.1| ATP-dependent chaperone ClpB [Pasteurella dagmatis ATCC 43325]
Length = 855
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/676 (60%), Positives = 543/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE+ L KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 144 GGQNVNDQNAEENRQALDKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 264 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 324 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 384 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLEML 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG
Sbjct: 444 EKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDNAKTQMEQARRASDFAKMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L + + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 504 VIPTLEKQLAQAESAE------GKEMTLLRHRVTDEEIAEVLSRATGIPVAKMMEGEKEK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ EAI AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 558 LLRMEDELHKRVIGQHEAIEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 618 ANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E ++ D + +K
Sbjct: 678 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENKEADYDSMKA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA IQL L ++ L + A
Sbjct: 738 LVMSVVGQHFRPEFINRIDETVVFHPLGKENIRAIATIQLQRLIKRMESHGYQLHFTDAC 797
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 798 LDFIGEVGYDPIYGAR 813
>gi|419829326|ref|ZP_14352814.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-1A2]
gi|419832128|ref|ZP_14355593.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-61A2]
gi|423849446|ref|ZP_17719228.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59A1]
gi|423879099|ref|ZP_17722834.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-60A1]
gi|408621960|gb|EKK94952.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-1A2]
gi|408643807|gb|EKL15524.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-60A1]
gi|408644845|gb|EKL16519.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59A1]
gi|408652029|gb|EKL23268.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-61A2]
Length = 823
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 111 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 291 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 411 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 471 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 525 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE
Sbjct: 585 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 705 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 765 ALDLIAHVGFDPVYGAR 781
>gi|262273641|ref|ZP_06051454.1| ClpB protein [Grimontia hollisae CIP 101886]
gi|262222056|gb|EEY73368.1| ClpB protein [Grimontia hollisae CIP 101886]
Length = 857
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 549/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L+K+TIDLTEKA GKLDPVIGRD+EIRR +QVLQRR+KNNPV+
Sbjct: 145 GGQAINDPNAEEARQALEKFTIDLTEKAEQGKLDPVIGRDEEIRRTVQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRNKRVLSLDMGSLVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 ELAKEEGNVILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHAVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERRLIQLKIE +A+ +E DE+SKKRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEQLDRLERRLIQLKIEQQALAKENDEASKKRLETL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI++ E +YA LE++W EK + +Q IK +E+ R + A R D +S+L+YG
Sbjct: 445 QSEIDEKEREYAELEEVWNAEKAALSGTQHIKSALEQARTDLEIARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q + TLLK +V EIAE++SR TGIPV+K+++ E+EK
Sbjct: 505 RIPELEKQLDLASQAEMQ------EMTLLKNRVTDAEIAEVLSRQTGIPVAKMLEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E+ L RV+GQ+EA+++V+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLHMEDELHSRVIGQEEAVTSVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDSSDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN +++MTSNLGSD+I+E + D IK
Sbjct: 679 VEKAHPDVFNLLLQVLDDGRLTDGQGRTVDFRNAVVIMTSNLGSDRIQEHFGELDYSGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINR+D+ +VF L +++I SIA+IQL L ++ + ++ L+++
Sbjct: 739 AMVMDVVSKHFRPEFINRVDESVVFHPLGQEHIKSIASIQLAHLAKRMAERDLILEVTDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I++ GFD +YGAR
Sbjct: 799 ALTLIADAGFDPVYGAR 815
>gi|58580960|ref|YP_199976.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|58425554|gb|AAW74591.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
KACC 10331]
Length = 898
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/683 (61%), Positives = 549/683 (80%), Gaps = 16/683 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 182 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 241
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 242 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 301
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 302 DLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 361
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 362 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 421
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL +
Sbjct: 422 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADL 481
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++ +L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 482 ESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 541
Query: 371 ELNKLER---ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ I E D F L++ +V +EEIAE+VSR TGIPV+K+++ E
Sbjct: 542 VLPQLEKQMLIANEVEHHD---------FKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGE 592
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 593 RDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELC 652
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++ E++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRR+PY+LIL
Sbjct: 653 KALADFLFDSTEAMIRIDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEAVRRRPYALIL 712
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKE 606
LDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 713 LDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAE 772
Query: 607 I---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + +
Sbjct: 773 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLR 832
Query: 664 LKISKAALKKISNIGFDLIYGAR 686
L + AAL+ + N+GFD +YGAR
Sbjct: 833 LDLDDAALELLGNVGFDPVYGAR 855
>gi|188578062|ref|YP_001914991.1| ATP-dependent chaperone ClpB [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188522514|gb|ACD60459.1| ATP-dependent chaperone ClpB [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 898
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/683 (61%), Positives = 549/683 (80%), Gaps = 16/683 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 182 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 241
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 242 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 301
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 302 DLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 361
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 362 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 421
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL +
Sbjct: 422 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADL 481
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++ +L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 482 ESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 541
Query: 371 ELNKLER---ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ I E D F L++ +V +EEIAE+VSR TGIPV+K+++ E
Sbjct: 542 VLPQLEKQMLIANEVEHHD---------FKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGE 592
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 593 RDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELC 652
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++ E++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRR+PY+LIL
Sbjct: 653 KALADFLFDSTEAMIRIDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEAVRRRPYALIL 712
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKE 606
LDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 713 LDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAE 772
Query: 607 I---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + +
Sbjct: 773 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLR 832
Query: 664 LKISKAALKKISNIGFDLIYGAR 686
L + AAL+ + N+GFD +YGAR
Sbjct: 833 LDLDDAALELLGNVGFDPVYGAR 855
>gi|422921936|ref|ZP_16955141.1| ATP-dependent chaperone ClpB [Vibrio cholerae BJG-01]
gi|341647481|gb|EGS71560.1| ATP-dependent chaperone ClpB [Vibrio cholerae BJG-01]
Length = 857
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|153215108|ref|ZP_01949815.1| clpB protein [Vibrio cholerae 1587]
gi|153826762|ref|ZP_01979429.1| clpB protein [Vibrio cholerae MZO-2]
gi|229530515|ref|ZP_04419903.1| ClpB protein [Vibrio cholerae 12129(1)]
gi|254224985|ref|ZP_04918599.1| clpB protein [Vibrio cholerae V51]
gi|254291987|ref|ZP_04962767.1| clpB protein [Vibrio cholerae AM-19226]
gi|297580832|ref|ZP_06942758.1| chaperone clpB [Vibrio cholerae RC385]
gi|417819563|ref|ZP_12466179.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE39]
gi|417823828|ref|ZP_12470420.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE48]
gi|419835628|ref|ZP_14359073.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-46B1]
gi|421350540|ref|ZP_15800906.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-25]
gi|422306203|ref|ZP_16393387.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1035(8)]
gi|423733990|ref|ZP_17707206.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-41B1]
gi|423947665|ref|ZP_17733624.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-40]
gi|423976935|ref|ZP_17737172.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-46]
gi|424008275|ref|ZP_17751225.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-44C1]
gi|424589954|ref|ZP_18029401.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1037(10)]
gi|124114899|gb|EAY33719.1| clpB protein [Vibrio cholerae 1587]
gi|125622372|gb|EAZ50692.1| clpB protein [Vibrio cholerae V51]
gi|149739413|gb|EDM53653.1| clpB protein [Vibrio cholerae MZO-2]
gi|150422126|gb|EDN14093.1| clpB protein [Vibrio cholerae AM-19226]
gi|229332288|gb|EEN97776.1| ClpB protein [Vibrio cholerae 12129(1)]
gi|297535248|gb|EFH74083.1| chaperone clpB [Vibrio cholerae RC385]
gi|340041125|gb|EGR02093.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE39]
gi|340048457|gb|EGR09379.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE48]
gi|395954662|gb|EJH65272.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-25]
gi|408036118|gb|EKG72565.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1037(10)]
gi|408627166|gb|EKK99985.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1035(8)]
gi|408631760|gb|EKL04288.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-41B1]
gi|408661665|gb|EKL32649.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-40]
gi|408666033|gb|EKL36836.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-46]
gi|408859041|gb|EKL98711.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-46B1]
gi|408866145|gb|EKM05534.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-44C1]
Length = 857
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|258620376|ref|ZP_05715414.1| clpB protein [Vibrio mimicus VM573]
gi|258587255|gb|EEW11966.1| clpB protein [Vibrio mimicus VM573]
Length = 857
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|421502047|ref|ZP_15949003.1| ATPase [Pseudomonas mendocina DLHK]
gi|400347331|gb|EJO95685.1| ATPase [Pseudomonas mendocina DLHK]
Length = 854
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/686 (61%), Positives = 558/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAIANLRGGQAVNDPNVEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKDKRLLSLDMGSLIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+S + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELSKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQ+IEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQFIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E++KKRL+ ++++I KLE +YA+LE+IWK EK ++ S QI++ IE+ + ++ A RK D
Sbjct: 435 EATKKRLVKLEEDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQRIEQAKTELEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++L+YG + LER L+ Q + ++ LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LNRMAELQYGVIPDLERSLQMVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E LL +RV+GQDEA+ AV+NA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGEREKLLKMEGLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+
Sbjct: 669 KPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GDKE + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L +
Sbjct: 729 -VGDKEAQRAAVMDAVSSHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRGRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L+++ AL K+ +G+D +YGAR
Sbjct: 788 ELSLELTPEALDKLIAVGYDPVYGAR 813
>gi|258624749|ref|ZP_05719683.1| clpB protein [Vibrio mimicus VM603]
gi|258583036|gb|EEW07851.1| clpB protein [Vibrio mimicus VM603]
Length = 857
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|444921257|ref|ZP_21241094.1| Chaperone protein ClpB [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507616|gb|ELV07791.1| Chaperone protein ClpB [Wohlfahrtiimonas chitiniclastica SH04]
Length = 867
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/721 (59%), Positives = 567/721 (78%), Gaps = 24/721 (3%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+K +L+ G+ + EE+ L KYT+DLT++A GKLDPVIGRDDEIRR
Sbjct: 129 GLKKETLSTVIDNLRGGEAVNDANSEENRQALSKYTVDLTKRAEEGKLDPVIGRDDEIRR 188
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
IQVL RR+KNNPVLIGEPGVGKTAI+EGLAQRI+NGEVP L +K +L LD+ L+AG
Sbjct: 189 CIQVLSRRTKNNPVLIGEPGVGKTAIIEGLAQRIVNGEVPEGLKNKSVLSLDMGALIAGA 248
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
K+RGEFE+RLK +L E+ II+FIDE+HTM+G GK +G++DAGNMLKP LSRGELH
Sbjct: 249 KFRGEFEERLKAVLNELGKQDGRIILFIDEIHTMVGAGKGDGAMDAGNMLKPALSRGELH 308
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
CIGATTL+EYRQYIEKD A ERRFQ++LV+EP +E+TI+ILRGL+++YE+HHGVEITDPA
Sbjct: 309 CIGATTLDEYRQYIEKDPALERRFQRVLVDEPTVEDTIAILRGLKERYEIHHGVEITDPA 368
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ LS RYI+DR +PDKAIDLIDEAA+ +++EIDSKPE MDKL+RRLIQLKIE EAI
Sbjct: 369 IVAAATLSNRYITDRQLPDKAIDLIDEAASLVRMEIDSKPEEMDKLDRRLIQLKIEREAI 428
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
K+E D++SKKRL ++++EI L +Y++LE++WK EK++++ + IKE++EK R ++ A
Sbjct: 429 KKEKDDASKKRLEILEQEIEDLSKEYSDLEEVWKKEKSVMQGATSIKEDLEKARNEMEAA 488
Query: 356 TRKSDWQTVSKLKYGELNKLERILKE--KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVS 413
R D +S+L+YG + +LE LKE ++ D++ N L++T V SEEIAEIVS
Sbjct: 489 RRSGDLAKMSELQYGRIPELEAQLKEAQANEGDVERKNQ-----LVRTNVTSEEIAEIVS 543
Query: 414 RTTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSF 473
+ TGIPV+++++ EREKLL++E+ L +V+GQ EAISAVS+A+RRSR+GLSD RP GSF
Sbjct: 544 KWTGIPVTRMLEGEREKLLHMESFLANQVIGQKEAISAVSDAVRRSRAGLSDPNRPIGSF 603
Query: 474 MFLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGY 533
+FLGPTGVGKTEL K L+ +F++E ++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGY
Sbjct: 604 LFLGPTGVGKTELTKALANFLFDSEAAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGY 663
Query: 534 LTEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLG 593
LTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLG
Sbjct: 664 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLG 723
Query: 594 SDKIKEM--------EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSI 645
S I+E EK E IK +VM+ V +FRPEFINRIDDI+VF LN++NI SI
Sbjct: 724 SSIIQEQTHALSNMDEKDQYEAIKASVMDVVGQHFRPEFINRIDDIVVFHPLNKENIRSI 783
Query: 646 ANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKK 705
A +Q++ + +L ++L I+ AL ++ +G+D ++GAR + K+++ I L+ K
Sbjct: 784 AKLQVDRVIKRLADQEIELAITDGALDELGEVGYDPVFGARPL---KRAIQIHLENPLAK 840
Query: 706 S 706
S
Sbjct: 841 S 841
>gi|120599936|ref|YP_964510.1| ATPase [Shewanella sp. W3-18-1]
gi|146292128|ref|YP_001182552.1| ATPase [Shewanella putrefaciens CN-32]
gi|120560029|gb|ABM25956.1| ATPase AAA-2 domain protein [Shewanella sp. W3-18-1]
gi|145563818|gb|ABP74753.1| ATPase AAA-2 domain protein [Shewanella putrefaciens CN-32]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/716 (58%), Positives = 560/716 (78%), Gaps = 21/716 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ E+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVL
Sbjct: 145 GGQNVDDPNAEDQRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL +
Sbjct: 385 KLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLDHL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ +E K + L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 QEELRDVEAKASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREK
Sbjct: 505 RIPELEKQLDLASQAEMQ------DMTLLRNKVTEFEIAEVLSKATGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ARFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--- 607
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G ++
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFGQVTYA 735
Query: 608 -IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K AVMN V FRPEF+NRID+ +VF L+ NI IA+IQ+ L+ +L + + L+I
Sbjct: 736 EMKAAVMNVVTHSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKDYTLEI 795
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 722
+ AL I+ IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 796 TDEALSLIAEIGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGKP 843
>gi|424658578|ref|ZP_18095835.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-16]
gi|408054712|gb|EKG89675.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-16]
Length = 823
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 111 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 291 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 411 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 471 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 525 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 585 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 705 EQVMDIVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYPLEVDDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 765 ALDLIAHVGFDPVYGAR 781
>gi|429887941|ref|ZP_19369446.1| ClpB protein [Vibrio cholerae PS15]
gi|429225109|gb|EKY31395.1| ClpB protein [Vibrio cholerae PS15]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|339485554|ref|YP_004700082.1| ATP-dependent chaperone ClpB [Pseudomonas putida S16]
gi|338836397|gb|AEJ11202.1| ATP-dependent chaperone ClpB [Pseudomonas putida S16]
Length = 831
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 548/666 (82%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 132 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 191
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 192 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLLNELSKQEGQII 251
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 252 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 311
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 312 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 371
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI++LE +
Sbjct: 372 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIDRLERE 431
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
YA+LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 432 YADLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQYGVIPDLERSLQ 491
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 492 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 545
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ+EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 546 RVIGQNEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 605
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 606 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 665
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 666 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGSHF 724
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 725 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 784
Query: 681 LIYGAR 686
+YGAR
Sbjct: 785 PVYGAR 790
>gi|357416692|ref|YP_004929712.1| ATP-dependent Clp protease subunit [Pseudoxanthomonas spadix
BD-a59]
gi|355334270|gb|AER55671.1| ATP-dependent Clp protease subunit [Pseudoxanthomonas spadix
BD-a59]
Length = 861
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/680 (61%), Positives = 547/680 (80%), Gaps = 10/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ S+ E+ L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVQSENAEDQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPENLKNKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 DLAKSEGQIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D++ERRLIQLK + E +K+E D S KRL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRMERRLIQLKTQREMLKKEKDAESAKRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+ LE ++++L ++WK EK ++ + +IKE+IE R+++ A R+ D+ +S+++YG
Sbjct: 445 EADIDTLEREFSDLNEVWKSEKAALQGATRIKEQIEAARVELEGAQRRQDYARMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LE+ L E +F L++ +V +EEIAE+VSR TGIPVSK+++ EREK
Sbjct: 505 VLPQLEKQLAEAQAA------EQQEFKLVQDRVTAEEIAEVVSRWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQ+EAI VS+++RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEDQLRERVVGQEEAIKVVSDSVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE
Sbjct: 619 AEFLFDSSEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE---- 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+EM +
Sbjct: 679 VEKAHGDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSHDESAESYT 738
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
IK AVM V+ +FRPEFINR+DDI+VF L++ I IA IQL L+ +L + L++
Sbjct: 739 KIKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKVQIRQIARIQLRGLEARLRDRGIGLEV 798
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL + +IGFD +YGAR
Sbjct: 799 SDAALSILGDIGFDPVYGAR 818
>gi|84622886|ref|YP_450258.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84366826|dbj|BAE67984.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 861
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/683 (61%), Positives = 549/683 (80%), Gaps = 16/683 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I+KLE ++ +L ++WK EK ++ + +IKE+IE +L++ A R+ D+ +S+++YG
Sbjct: 445 ESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYG 504
Query: 371 ELNKLER---ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
L +LE+ I E D F L++ +V +EEIAE+VSR TGIPV+K+++ E
Sbjct: 505 VLPQLEKQMLIANEVEHHD---------FKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGE 555
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E+ L RVVGQ+EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 556 RDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELC 615
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++ E++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRR+PY+LIL
Sbjct: 616 KALADFLFDSTEAMIRIDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEAVRRRPYALIL 675
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKE 606
LDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E
Sbjct: 676 LDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAE 735
Query: 607 I---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 663
+K AVM V+ +FRPEFINR+DDI+VF L++ I SIA IQL L+ +L + +
Sbjct: 736 AYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLR 795
Query: 664 LKISKAALKKISNIGFDLIYGAR 686
L + AAL+ + N+GFD +YGAR
Sbjct: 796 LDLDDAALELLGNVGFDPVYGAR 818
>gi|146308654|ref|YP_001189119.1| ATPase [Pseudomonas mendocina ymp]
gi|145576855|gb|ABP86387.1| ATPase AAA-2 domain protein [Pseudomonas mendocina ymp]
Length = 854
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/686 (61%), Positives = 558/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAIANLRGGQAVNDPNVEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAI EGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNGEVPDGLKDKRLLSLDMGSLIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+S + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELSKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQ+IEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQFIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E++KKRL+ ++++I KLE +YA+LE+IWK EK ++ S QI++ IE+ + ++ A RK D
Sbjct: 435 EATKKRLVKLEEDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQRIEQAKTELEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++L+YG + LER L+ Q + ++ LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LNRMAELQYGVIPDLERSLQMVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E LL +RV+GQDEA+ AV+NA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGEREKLLKMEGLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+
Sbjct: 669 KPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GDKE + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L +
Sbjct: 729 -VGDKEAQRAAVMDAVSSHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRGRLTER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L+++ AL K+ +G+D +YGAR
Sbjct: 788 ELSLELTPEALDKLIAVGYDPVYGAR 813
>gi|153820387|ref|ZP_01973054.1| chaperone ClpB [Vibrio cholerae NCTC 8457]
gi|126509069|gb|EAZ71663.1| chaperone ClpB [Vibrio cholerae NCTC 8457]
Length = 697
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/661 (61%), Positives = 542/661 (81%), Gaps = 7/661 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
++K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 1 MEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 60
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L E++ + +II+FIDEL
Sbjct: 61 QRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDEL 120
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD A ERRFQK+LV+E
Sbjct: 121 HTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDE 180
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 181 PTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 240
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++ +E+ + E YA LE+
Sbjct: 241 IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEE 300
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+WK EK + +Q IK +E+ R+ + A R D +S+L+YG + +LE+ L +Q +
Sbjct: 301 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE 360
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EKLL +E++L KRV+GQ
Sbjct: 361 MQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQK 414
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL+ +F++E++++R+DM
Sbjct: 415 EAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDM 474
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 475 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 534
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK VM+ V +FRPEF+
Sbjct: 535 DDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFL 594
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+ +VF L +++I SIA+IQL L+ +L + + L++ AL I+++GFD +YGA
Sbjct: 595 NRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGA 654
Query: 686 R 686
R
Sbjct: 655 R 655
>gi|319897647|ref|YP_004135844.1| protein disaggregation chaperone [Haemophilus influenzae F3031]
gi|317433153|emb|CBY81527.1| protein disaggregation chaperone [Haemophilus influenzae F3031]
Length = 856
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/676 (60%), Positives = 545/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQKVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSK E +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKSEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKEESYSEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L ++ +L + A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|77461055|ref|YP_350562.1| chaperone clpB [Pseudomonas fluorescens Pf0-1]
gi|77385058|gb|ABA76571.1| chaperone [Pseudomonas fluorescens Pf0-1]
Length = 854
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/676 (61%), Positives = 552/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI++ E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIDRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSMQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+N+L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRNRLAERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|359299621|ref|ZP_09185460.1| ATP-dependent Clp protease subunit B [Haemophilus [parainfluenzae]
CCUG 13788]
Length = 858
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/716 (57%), Positives = 571/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ +Q EE LKKYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 144 GGDNVNTQNAEETRQALKKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 264 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 324 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 384 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+ +++A R+++++ +S+L+YG
Sbjct: 444 DEELAAKEREYSELEEVWKAEKSALLGTQHIKTELENARIAMDQARRENNFEKMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L+E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 504 KIPALEKQLQEAVKREEEGSEN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 560 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 620 ASFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + +K
Sbjct: 680 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEAPEASYAEMKA 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L +++I +IA IQL L ++ + ++ ++ A
Sbjct: 740 LVMSVVGQHFRPEFINRIDETVVFHPLGQEHIRAIALIQLERLIKRMAERGYEVTVTDNA 799
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
+ I GFD ++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 800 IDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVVD 847
>gi|325273285|ref|ZP_08139562.1| ATP-dependent chaperone ClpB [Pseudomonas sp. TJI-51]
gi|324101570|gb|EGB99139.1| ATP-dependent chaperone ClpB [Pseudomonas sp. TJI-51]
Length = 854
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELEAARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLKMEALLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQGEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|389793058|ref|ZP_10196234.1| ATP-dependent chaperone ClpB [Rhodanobacter fulvus Jip2]
gi|388435195|gb|EIL92112.1| ATP-dependent chaperone ClpB [Rhodanobacter fulvus Jip2]
Length = 865
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/682 (60%), Positives = 545/682 (79%), Gaps = 12/682 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S+ EE L+KY IDLTE+A KLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVQSENAEEQRQALEKYCIDLTERAERNKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRII GEVP L +++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLSLDMGALIAGAKFRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLSKQEGRVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D SK+RL +
Sbjct: 385 QLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I KLE ++++L +IWK EK ++ + ++KE+IE+ ++ A R D+ +S+++YG
Sbjct: 445 ETDIEKLEREFSDLNEIWKSEKAALQGTTKVKEQIEQASQELEAARRAQDYARMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L + Q F L++TKV ++EIAE+V+R TGIPVSK+++ ER+K
Sbjct: 505 KLPALEKQLAVAQAAETQ------DFKLVQTKVTADEIAEVVARWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RVVGQDEA+ AV++AIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEDELHQRVVGQDEAVHAVADAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFMFDTTDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKE-- 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I++ + GD E
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDASESSGDAEEQ 738
Query: 607 --IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K +VM V+ +FRPEFINR+D+I+VFR L++ I +IA IQL L+ +L + + +
Sbjct: 739 YTQMKASVMGVVQAHFRPEFINRLDEIVVFRPLDKTQIRAIARIQLQYLEKRLAERQLKM 798
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+S AL + N+GFD +YGAR
Sbjct: 799 DVSDEALTLLGNVGFDPVYGAR 820
>gi|422916499|ref|ZP_16950837.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-02A1]
gi|423817409|ref|ZP_17715440.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55C2]
gi|423996921|ref|ZP_17740184.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-02C1]
gi|424015624|ref|ZP_17755471.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55B2]
gi|424020734|ref|ZP_17760514.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59B1]
gi|424628600|ref|ZP_18066905.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-51A1]
gi|424632634|ref|ZP_18070750.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-52A1]
gi|443528620|ref|ZP_21094654.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-78A1]
gi|341640132|gb|EGS64727.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-02A1]
gi|408020657|gb|EKG57947.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-52A1]
gi|408058575|gb|EKG93367.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-51A1]
gi|408636632|gb|EKL08769.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55C2]
gi|408854299|gb|EKL94063.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-02C1]
gi|408861789|gb|EKM01356.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55B2]
gi|408866599|gb|EKM05979.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59B1]
gi|443453194|gb|ELT17027.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-78A1]
Length = 857
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|307246005|ref|ZP_07528087.1| hypothetical protein appser1_12060 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306852940|gb|EFM85163.1| hypothetical protein appser1_12060 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 857
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/716 (57%), Positives = 570/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+I DPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQIIDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E +++ + N LL+ KV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLHEAVKREEEGSEN----QLLRAKVTEEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + +I +IA IQL L +L + ++ ++ AA
Sbjct: 739 VVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I GFD ++GAR + K+++ L ++P + I G L+ P +D
Sbjct: 799 LDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVVD 846
>gi|421323615|ref|ZP_15774143.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1041(14)]
gi|424594310|ref|ZP_18033648.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1040(13)]
gi|395922830|gb|EJH33645.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1041(14)]
gi|408036905|gb|EKG73321.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1040(13)]
Length = 857
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/677 (60%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTKRAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|419846184|ref|ZP_14369441.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK2019]
gi|386414479|gb|EIJ29035.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK2019]
Length = 856
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/676 (60%), Positives = 543/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQSVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELADKEREYAELEEVWKSEKATLSGSQHIKQELDAAKTEMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + TLL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLAAAE------TGEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESYGEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + NI +IA+IQL L ++ +L ++A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELVFTEAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|109897662|ref|YP_660917.1| ATPase [Pseudoalteromonas atlantica T6c]
gi|109699943|gb|ABG39863.1| ATPase AAA-2 [Pseudoalteromonas atlantica T6c]
Length = 858
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/702 (59%), Positives = 563/702 (80%), Gaps = 13/702 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG+PGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGQPGVGKTAIAEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KRL LI+ E + EIK++ LEK
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKRLELIEIEREQAEIKFSELEK 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK ++ +Q I+ E+++ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSELQYGRIPELESKLELATESE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
Q + LLK +V EIA+++SR TGIPVSK+++ E++KL+++E L +RVVGQ
Sbjct: 521 SQ----PLEHQLLKNRVTESEIADVLSRWTGIPVSKMLEGEKDKLMSMEAALHERVVGQS 576
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLANFLFDTEDAMVRIDM 636
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D E +K +V+N + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDYEKMKQSVLNVLSTHFRPEFL 756
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+ +VF L I SIA+ QL L+N+L + + L+++ AALKKI+ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLAQITSIASKQLQFLRNRLEEKGIGLELTDAALKKIAEAGFDPVYGA 816
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
R + K+++ + + ++P A I G L+++G S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLVSEGVVSIDA 850
>gi|410626519|ref|ZP_11337280.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
mesophila KMM 241]
gi|410154058|dbj|GAC24049.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
mesophila KMM 241]
Length = 858
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/702 (59%), Positives = 563/702 (80%), Gaps = 13/702 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG+PGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGQPGVGKTAIAEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LV+E
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KRL LI+ E + EIK++ LEK
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKRLELIEIEREQAEIKFSELEK 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK ++ +Q I+ E+++ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSELQYGRIPELESKLELATESE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
Q + LLK +V EIA+++SR TGIPVSK+++ E++KL+++E L +RVVGQ
Sbjct: 521 SQ----PLEHQLLKNRVTESEIADVLSRWTGIPVSKMLEGEKDKLMSMETALHERVVGQS 576
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLANFLFDTEDAMVRIDM 636
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+N++I+MTSNLGSD I+E + D E +K +V+N + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNSVIIMTSNLGSDIIQEQHSENDYEKMKQSVLNVLSTHFRPEFL 756
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+ +VF L I SIA+ QL L+N+L + + L+++ AALKKI+ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLAQITSIASKQLQFLRNRLEEKGIGLELTDAALKKIAEAGFDPVYGA 816
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
R + K+++ + + ++P A I G L+++G S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLVSEGVVSIDA 850
>gi|54035760|sp|Q6LMY0.2|CLPB_PHOPR RecName: Full=Chaperone protein ClpB
Length = 857
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/677 (61%), Positives = 549/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDQNAEENRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG+PGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGQPGVGKTAIVEGLAQRIVNGEVPEGLRHKRVLSLDMGSLIAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEEGSVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAARLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+ +E D +S+KRL I
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALSKESDAASQKRLNDI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +YA LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 CEELDVKEREYAELEEVWNAEKAALSGTQHIKSELEQARMNMEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q ++Q + +LLK KV EIAE++S+ TGIPV+K+++ ER+K
Sbjct: 505 KIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSKQTGIPVAKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHQRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSEDNMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E + E IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQENFGNLNYEGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V YFRPEFINR+D+ +VF L ++NI IA+IQ+ L N+L + + +L + ++
Sbjct: 739 NMVLEVVSQYFRPEFINRVDETVVFHPLGQENIKHIASIQIERLVNRLKEKDYELTVQES 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 799 ALDFVAKAGFDPVYGAR 815
>gi|422909223|ref|ZP_16943874.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-09]
gi|341635611|gb|EGS60321.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-09]
Length = 857
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLAIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E YA LE++WK EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L+ +L + + L++
Sbjct: 739 EQVMDIVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYPLEVDDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+++GFD +YGAR
Sbjct: 799 ALDLIAHVGFDPVYGAR 815
>gi|256822309|ref|YP_003146272.1| ATP-dependent chaperone ClpB [Kangiella koreensis DSM 16069]
gi|256795848|gb|ACV26504.1| ATP-dependent chaperone ClpB [Kangiella koreensis DSM 16069]
Length = 862
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/682 (60%), Positives = 551/682 (80%), Gaps = 12/682 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ E++ L+KYTIDL +A GKLDPVIGRDDEIRR IQVLQRRSKNNPVL
Sbjct: 145 GGQNVNDPNAEDNRQALEKYTIDLNARAESGKLDPVIGRDDEIRRCIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 DLAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSTEDTIAILRGLKERYEVHHGVEITDPAIVAATTLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE+MDKLERRLIQLKI+ EA+K+E DESSKKRLL +
Sbjct: 385 QLPDKAIDLVDEAASRIRMEIDSKPEVMDKLERRLIQLKIQREALKKEEDESSKKRLLDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I +LE ++A L++IW EK + +Q IK +++K R+++ A R D +S+L+YG
Sbjct: 445 EQQIAELEKEFAELDEIWSSEKASVHGAQNIKADLDKARVELEAAQRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE L + S++D + LL+ KV EIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 TIPELEAKLAKVSEQD------TVEMQLLRNKVTDVEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L V+GQDEA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHNNVIGQDEAVTAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKH+++RLIGAPPGY+GYE+GGYLTE VRRKPYS+IL DE
Sbjct: 619 AKFLFDSEDNMVRIDMSEFMEKHAVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILFDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDK- 605
+EKA+ DVFN+LLQ+L+DGRLTD++GRT++F+NT+IVMTSN+GSD I+ E GDK
Sbjct: 679 VEKAHPDVFNVLLQVLEDGRLTDSQGRTVDFKNTVIVMTSNMGSDLIQAHSANTEGGDKD 738
Query: 606 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
E +K +M+ + +FRPEFINRID+I+VF L ++ I SIA IQ+ L +L + ++
Sbjct: 739 YEDMKSMLMDVIGKHFRPEFINRIDEIVVFHPLAKEQIKSIAAIQMERLLQRLREQGFEV 798
Query: 665 KISKAALKKISNIGFDLIYGAR 686
K++ L+ +S GFD ++GAR
Sbjct: 799 KVTDGLLELLSESGFDPVFGAR 820
>gi|149377764|ref|ZP_01895497.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
algicola DG893]
gi|149357936|gb|EDM46425.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
algicola DG893]
Length = 858
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/710 (58%), Positives = 559/710 (78%), Gaps = 17/710 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ EE+ L KY IDLTE+A GKLDPVIGRDDEIRR IQVLQRR KNNPVL
Sbjct: 145 GGESVDDASAEENRQALSKYAIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + II+FIDE+HTM+G GK EGS+DAGNMLKP LSRGELHC+GATTL+EYR+ IE
Sbjct: 265 ELAKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALSRGELHCVGATTLDEYRENIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP E+TI+ILRGL+++YEVHHGVE+TD AI+AA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVSEPTEEDTIAILRGLKERYEVHHGVEVTDGAIIAAARLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL +
Sbjct: 385 QLPDKAIDLVDEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKKRLSEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ I+ +E +YA+LE++W EK + SQ+IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 SEVISGIEREYADLEEVWNTEKAALHGSQKIKSQLEQARIDLENARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LER L SQ ++ + LL+ +V EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 QIPELERQLDMASQAEMM------EMKLLRNRVTDEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E L RV+GQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I++ + G++ E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQ-KAGEENYEAM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINR+D+++VF L I IA IQ++ L +L + +M L +
Sbjct: 738 KSDVMAVVGTHFRPEFINRVDEVVVFHPLAESQIQGIARIQVDALGKRLKEQDMSLVLDD 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
AA++ ++ +G+D +YGAR + K+++ ++ ++P A + GD +
Sbjct: 798 AAMELLAEVGYDPVYGARPL---KRAIQRMI-----ENPLAQRLLQGDFL 839
>gi|297171552|gb|ADI22550.1| hypothetical protein [uncultured Oceanospirillales bacterium
HF0500_09M11]
Length = 861
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/678 (62%), Positives = 546/678 (80%), Gaps = 6/678 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ + LKKYT DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVTDPNAEDKMEALKKYTQDLTARAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+A L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLALDMAALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IE
Sbjct: 265 ELSKQEGRIILFVDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQHIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V++P +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVQVDQPSVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDS PE MD+L+RRLIQLK+E EA+++E DE+SKKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSMPEEMDRLDRRLIQLKMEREALRKEDDEASKKRLDKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI LE +YA+LE+IW EK ++ +QQ K E+E+ R+ + +A R D +S+L+YG
Sbjct: 445 QDEIAALEKEYADLEEIWNAEKAALQGAQQYKAELEQARVDMEQARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFT-LLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+ LE+ K Q + +A T LL+ KV EE+AE+VS+ TGIPVSK+++ ER+
Sbjct: 505 VIPDLEK----KVQTAQEAEESAQVETKLLRNKVTEEEVAEVVSKWTGIPVSKMLEGERD 560
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E L RVVGQDEA++AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK
Sbjct: 561 KLLRMEEALHARVVGQDEAVTAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKA 620
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLD
Sbjct: 621 LAGFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLD 680
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEII 608
E+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I+ M GD + +
Sbjct: 681 EVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRMAGDGDYDAM 740
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V +FRPEFINR+D+ +VF L R + IA IQL+ L+ +L++ +M L++S
Sbjct: 741 KGAVMEVVGQHFRPEFINRVDETVVFHPLARGQLKGIAAIQLDYLRQRLVERDMGLRLSD 800
Query: 669 AALKKISNIGFDLIYGAR 686
AL+K+ GFD +YGAR
Sbjct: 801 KALEKLVEAGFDPVYGAR 818
>gi|54310128|ref|YP_131148.1| clpB, ATPase with chaperone activity [Photobacterium profundum SS9]
gi|46914567|emb|CAG21346.1| putative clpB, ATPases with chaperone activity [Photobacterium
profundum SS9]
Length = 861
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/677 (61%), Positives = 549/677 (81%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 149 GGQKVDDQNAEENRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG+PGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGQPGVGKTAIVEGLAQRIVNGEVPEGLRHKRVLSLDMGSLIAGAKYRGEFEERLKSVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 ELSQEEGSVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 329 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAARLSHRYVSDR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+ +E D +S+KRL I
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALSKESDAASQKRLNDI 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +YA LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 449 CEELDVKEREYAELEEVWNAEKAALSGTQHIKSELEQARMNMEVARRAGDLNRMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q ++Q + +LLK KV EIAE++S+ TGIPV+K+++ ER+K
Sbjct: 509 KIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSKQTGIPVAKMLEGERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 563 LLRMEDELHQRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSEDNMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E + E IK
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQENFGNLNYEGIK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V YFRPEFINR+D+ +VF L ++NI IA+IQ+ L N+L + + +L + ++
Sbjct: 743 NMVLEVVSQYFRPEFINRVDETVVFHPLGQENIKHIASIQIERLVNRLKEKDYELTVQES 802
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD +YGAR
Sbjct: 803 ALDFVAKAGFDPVYGAR 819
>gi|148545915|ref|YP_001266017.1| ATPase [Pseudomonas putida F1]
gi|148509973|gb|ABQ76833.1| ATPase AAA-2 domain protein [Pseudomonas putida F1]
Length = 854
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|410622643|ref|ZP_11333474.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
pallidula DSM 14239 = ACAM 615]
gi|410157836|dbj|GAC28848.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
pallidula DSM 14239 = ACAM 615]
Length = 858
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/677 (62%), Positives = 547/677 (80%), Gaps = 5/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
NG+ + E+ L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 NGQKVTDPNAEDVRQALEKYTMDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGSLLAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G G EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELSKEEGKVILFIDELHTMVGAGAGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYISDR
Sbjct: 325 KDAALERRFQKVQVDQPSVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSNRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE MDKLERR+IQLK+E +A+ +E D SS KRL +I
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEEMDKLERRIIQLKLEEQALSKETDTSSLKRLEVI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E +LE K+A L+KIW+ EK+ ++ +Q IK E+E+ +L + A R SD +S+L+YG
Sbjct: 445 EIEREQLEQKFAELDKIWRAEKSAMQGTQFIKAELEQAKLDLEIARRASDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE LK + + + NA + LLK KV +EIA+++SR TGIPVSK+++ E++K
Sbjct: 505 RIPELE--LKLEQANETETETNATR--LLKNKVTEKEIADVLSRWTGIPVSKMLEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+++E+++ KRVVGQ EA+ AVSNAI+RSR+GLSD +P GSF+FLGPTGVGKTELCK+L
Sbjct: 561 LIHMEDIIGKRVVGQKEAVVAVSNAIKRSRAGLSDPDKPTGSFLFLGPTGVGKTELCKSL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E+++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 621 ANFLFDTEDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-IK 609
+EKA+ DVFNILLQ+LDDGRLTD GRT+NF+NT+I+MTSNLGS+ I+ I +K
Sbjct: 681 VEKAHPDVFNILLQVLDDGRLTDGHGRTVNFKNTLIIMTSNLGSEIIQNHTDDSTYIEMK 740
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM EV +FRPEFINR+DDI+VF L R+ I SIA IQL L+ +L +M + L+IS A
Sbjct: 741 QQVMAEVSTHFRPEFINRVDDIVVFHSLGREEIKSIAKIQLVGLRQRLQEMGLKLEISAA 800
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 801 ALDIIAEAGFDPVYGAR 817
>gi|416077717|ref|ZP_11586018.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|348003902|gb|EGY44453.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
Length = 856
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/676 (60%), Positives = 544/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L + + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 505 KIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLHMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + + +K
Sbjct: 679 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDHAQEGYDTVKS 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM V YFRPEFINRID+ ++F LN++NI IA+IQL L ++ L + A
Sbjct: 739 MVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDAT 798
Query: 671 LKKISNIGFDLIYGAR 686
L IS+IG+D I+GAR
Sbjct: 799 LDFISDIGYDPIFGAR 814
>gi|386312799|ref|YP_006008964.1| ATP-dependent chaperone ClpB [Shewanella putrefaciens 200]
gi|319425424|gb|ADV53498.1| ATP-dependent chaperone ClpB [Shewanella putrefaciens 200]
Length = 857
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/716 (58%), Positives = 560/716 (78%), Gaps = 21/716 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ E+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVL
Sbjct: 145 GGQNVDDPNAEDQRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL +
Sbjct: 385 KLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLDHL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ +E K + L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 QEELRDVEAKASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREK
Sbjct: 505 RIPELEKQLDLASQAEMQ------DMTLLRNKVTEFEIAEVLSKATGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ARFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--- 607
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGSD I+E G ++
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSDIIQE---GFGQVTYA 735
Query: 608 -IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K AVMN V FRPEF+NRID+ +VF L+ NI IA+IQ+ L+ +L + + L+I
Sbjct: 736 EMKAAVMNVVTHSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKDYTLEI 795
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 722
+ AL I+ IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 796 TDDALSLIAEIGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGKP 843
>gi|444428933|ref|ZP_21224219.1| hypothetical protein B878_23058 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444237842|gb|ELU49493.1| hypothetical protein B878_23058 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 857
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+N+ E +YA LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 NDELNEKEREYAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVLIMTSNLGSARIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L +L + L++ +
Sbjct: 739 NEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVPEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|330504856|ref|YP_004381725.1| ATPase [Pseudomonas mendocina NK-01]
gi|328919142|gb|AEB59973.1| ATPase [Pseudomonas mendocina NK-01]
Length = 854
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/686 (61%), Positives = 559/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAIANLRGGQAVNDPNVEESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAI EGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNGEVPDGLKDKRLLSLDMGSLIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKSVLNELGKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQ+IEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQFIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E++KKRL+ ++++I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 435 EATKKRLVKLEEDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQKIEQAKTELESARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++L+YG + LER L+ Q + ++ LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LNRMAELQYGVIPDLERSLQMVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E LL +RV+GQDEA+ AV+NA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGEREKLLKMEGLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+
Sbjct: 669 KPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GDKE + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L +
Sbjct: 729 -VGDKEAQRAAVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRGRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
++ L+++ AL K+ +G+D +YGAR
Sbjct: 788 DLTLELTPEALDKLIAVGYDPVYGAR 813
>gi|395447027|ref|YP_006387280.1| ATPase [Pseudomonas putida ND6]
gi|388561024|gb|AFK70165.1| ATPase [Pseudomonas putida ND6]
Length = 831
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 132 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 191
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 192 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 251
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 252 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 311
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 312 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 371
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 372 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 431
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 432 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQYGVIPDLERSLQ 491
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 492 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 545
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 546 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 605
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 606 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 665
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 666 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 724
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 725 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 784
Query: 681 LIYGAR 686
+YGAR
Sbjct: 785 PVYGAR 790
>gi|365967014|ref|YP_004948576.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365745927|gb|AEW76832.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 856
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/676 (60%), Positives = 544/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L + + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 505 KIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLHMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + + +K
Sbjct: 679 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDHAQEGYDTVKS 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM V YFRPEFINRID+ ++F LN++NI IA+IQL L ++ L + A
Sbjct: 739 MVMEVVGHYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDAT 798
Query: 671 LKKISNIGFDLIYGAR 686
L IS+IG+D I+GAR
Sbjct: 799 LDFISDIGYDPIFGAR 814
>gi|238921070|ref|YP_002934585.1| ATP-dependent chaperone protein ClpB, putative [Edwardsiella
ictaluri 93-146]
gi|238870639|gb|ACR70350.1| ATP-dependent chaperone protein ClpB, putative [Edwardsiella
ictaluri 93-146]
Length = 857
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/678 (60%), Positives = 543/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ L KYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVDDQNAEDQRQALNKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E YA+LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG
Sbjct: 445 NIELEEKERDYASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KLPDLEKQLQAATQAE------GKSMKLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRVVGQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEGELHKRVVGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ GD+ +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQD-RFGDQSYGEM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM+ V +FRPEFINRID+ +VF L ++NI +IA IQL L +L + + +S+
Sbjct: 738 KALVMSVVTHHFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKGYSVTMSE 797
Query: 669 AALKKISNIGFDLIYGAR 686
AAL ++S GFD +YGAR
Sbjct: 798 AALDQLSQAGFDPVYGAR 815
>gi|261867258|ref|YP_003255180.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415767634|ref|ZP_11483306.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|261412590|gb|ACX81961.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348658570|gb|EGY76138.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-2]
Length = 856
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/676 (60%), Positives = 544/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L + + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 505 KIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLHMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSEDAMMRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + + +K
Sbjct: 679 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDHAQEGYDTVKS 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM V YFRPEFINRID+ ++F LN++NI IA+IQL L ++ L + A
Sbjct: 739 MVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDAT 798
Query: 671 LKKISNIGFDLIYGAR 686
L IS+IG+D I+GAR
Sbjct: 799 LDFISDIGYDPIFGAR 814
>gi|77359882|ref|YP_339457.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas
haloplanktis TAC125]
gi|76874793|emb|CAI86014.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas
haloplanktis TAC125]
Length = 858
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/678 (62%), Positives = 548/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASLKRRTEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I +LE +Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG
Sbjct: 445 QELITELEGEYNELDEIWTAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + TLLK +VG +EIAEI+SR TGIPVS+++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L ++V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEEKLHEKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGYMFDTESAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + G+ + + L
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQE-QAGNNDYVTL 737
Query: 611 --AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
VMN + FRPEFINRID+ +VF L ++I IA+IQL+ L+ +L +M L+IS
Sbjct: 738 KEKVMNVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLSKLRERLTQMGYLLEISD 797
Query: 669 AALKKISNIGFDLIYGAR 686
AAL++I+ GFD +YGAR
Sbjct: 798 AALERIAASGFDPVYGAR 815
>gi|421524703|ref|ZP_15971324.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida LS46]
gi|402751166|gb|EJX11679.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida LS46]
Length = 854
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|419801894|ref|ZP_14327097.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK262]
gi|385192261|gb|EIF39667.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK262]
Length = 856
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/676 (60%), Positives = 543/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q EE L+KYTIDLT A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQSVNDQNAEESRQALEKYTIDLTASAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE++ E +YA LE++WK EK + SQ IK+E++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELSDKEREYAELEEVWKSEKAALSGSQHIKQELDAAKTEMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + +LL+ +V EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLAAAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESYGEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + NI +IA+IQL L ++ +L ++A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELVFTEAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|387774041|ref|ZP_10129321.1| ATP-dependent chaperone protein ClpB [Haemophilus parahaemolyticus
HK385]
gi|386903128|gb|EIJ67948.1| ATP-dependent chaperone protein ClpB [Haemophilus parahaemolyticus
HK385]
Length = 857
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/716 (57%), Positives = 570/716 (79%), Gaps = 12/716 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGETVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAAVLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+ + +A R+++ + +S+L+YG
Sbjct: 443 DEELTAKEREYSELEEVWKAEKSALLGTQHIKTELENARIAMEQARRENNLEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L+E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E++K
Sbjct: 503 KIPALEKQLQEAVKREEEGGEN----HLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L RV+GQ+EA+ AVSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMESVLHARVIGQNEAVEAVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GA PGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGASPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+EM + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPEATYGELKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L +++I SIA IQL L ++ + ++ I+ AA
Sbjct: 739 VVMSVVSQHFRPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRIAERGYEVTITDAA 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
+ I GFD ++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 799 IDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVVD 846
>gi|167031687|ref|YP_001666918.1| ATP-dependent chaperone ClpB [Pseudomonas putida GB-1]
gi|166858175|gb|ABY96582.1| ATP-dependent chaperone ClpB [Pseudomonas putida GB-1]
Length = 854
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKGLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEALLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQGEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPDALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|388600531|ref|ZP_10158927.1| hypothetical protein VcamD_11584 [Vibrio campbellii DS40M4]
Length = 857
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 548/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNENDEASEKRLDVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N+ E +YA LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 NEELNEKEREYAELEEVWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVLIMTSNLGSARIQENFATLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L ++ + L++S+
Sbjct: 739 NEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRIEEKGYQLEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|323497828|ref|ZP_08102842.1| hypothetical protein VISI1226_18161 [Vibrio sinaloensis DSM 21326]
gi|323317175|gb|EGA70172.1| hypothetical protein VISI1226_18161 [Vibrio sinaloensis DSM 21326]
Length = 857
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDQNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLNIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+++ E ++A LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELSEKEREFAELEEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVSDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLQMEQFLHKRVIGQTEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFGALDYEGMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L +++I SIA+IQL L ++ + L++S+
Sbjct: 739 QQVMEVVSKHFRPEFLNRVDESVVFHPLAQEHIKSIASIQLKRLSERMEEKGYSLEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD ++GAR
Sbjct: 799 ALDLIAQVGFDPVFGAR 815
>gi|294634722|ref|ZP_06713253.1| ATP-dependent chaperone protein ClpB [Edwardsiella tarda ATCC
23685]
gi|451966850|ref|ZP_21920100.1| chaperone protein ClpB [Edwardsiella tarda NBRC 105688]
gi|291091852|gb|EFE24413.1| ATP-dependent chaperone protein ClpB [Edwardsiella tarda ATCC
23685]
gi|451314387|dbj|GAC65462.1| chaperone protein ClpB [Edwardsiella tarda NBRC 105688]
Length = 857
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/680 (60%), Positives = 545/680 (80%), Gaps = 13/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVEDQNAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E YA+LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG
Sbjct: 445 NSELEEKERDYASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KLPDLEKQLQSATQAE------GKSMKLLRNKVTDVEIAEVLARWTGIPVSRMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRVVGQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDELHKRVVGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EMEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ E+ G+
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGELSYGE-- 736
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM+ V +FRPEFINRID+ +VF L ++NI +IA IQL L +L + + +
Sbjct: 737 -MKELVMSVVTHHFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKGYSVTM 795
Query: 667 SKAALKKISNIGFDLIYGAR 686
S+AAL ++S GFD +YGAR
Sbjct: 796 SEAALDQLSQAGFDPVYGAR 815
>gi|348028567|ref|YP_004871253.1| ClpB protein [Glaciecola nitratireducens FR1064]
gi|347945910|gb|AEP29260.1| ClpB protein [Glaciecola nitratireducens FR1064]
Length = 856
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/682 (62%), Positives = 549/682 (80%), Gaps = 8/682 (1%)
Query: 6 NSLNVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSK 65
NSL NG+ + E+ L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+K
Sbjct: 141 NSLR-NGQKVTDPNAEDVRQALEKFTMDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTK 199
Query: 66 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 125
NNPVLIGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGSLLAGAKYRGEFEERL 259
Query: 126 KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 185
K +L E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGKVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319
Query: 186 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 245
RQYIEKDAA ERRFQK+ V++P +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDAALERRFQKVQVDQPSVEDTIAILRGLKERYELHHSVNITDPAIVAAARLSNR 379
Query: 246 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 305
YISDR +PDKAIDLIDEAA+ I+++IDSKP+ MDKLERR+IQLK+E +A+ +E D +S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPDEMDKLERRIIQLKLEEQALSKETDTASLK 439
Query: 306 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 365
RL +I+ E +LE K+ +L+KIW+ EK ++ +Q IK E+E+ +L + A R SD +S
Sbjct: 440 RLEVIEIEREQLEQKFGDLDKIWRAEKNAMQGTQFIKGELEQAKLDLEIARRASDLSRMS 499
Query: 366 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
+L+YG + +LE L++ S+ DI + L+K KV EIA+++SR TGIPVSK++
Sbjct: 500 ELQYGRIPELELKLEQASESDIM------ETQLIKNKVTENEIADVLSRWTGIPVSKMLD 553
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
E++KL+++E+ + KRV+GQ EA+ AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTE
Sbjct: 554 SEKDKLVSMEDTIGKRVIGQREAVVAVSNAIRRSRAGLADPDKPTGSFLFLGPTGVGKTE 613
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
LCK+L+ +F+ E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLANFLFDTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK-EMEKGD 604
ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+ +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTLIIMTSNLGSDIIQGHTDDST 733
Query: 605 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
E +K VM EV +FRPEFINR+DDI+VF L R+ I SIA IQL L+ +L +M + L
Sbjct: 734 YEEMKKQVMVEVSAHFRPEFINRVDDIVVFHSLGREEIKSIAKIQLLGLRQRLQEMGLKL 793
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+IS AAL I++ GFD +YGAR
Sbjct: 794 EISGAALDIIADAGFDPVYGAR 815
>gi|127513876|ref|YP_001095073.1| ATPase [Shewanella loihica PV-4]
gi|126639171|gb|ABO24814.1| ATPase AAA-2 domain protein [Shewanella loihica PV-4]
Length = 857
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/717 (58%), Positives = 556/717 (77%), Gaps = 15/717 (2%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
GKNI E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLI
Sbjct: 146 GKNIDDPNAEDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRIINGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E
Sbjct: 206 GEPGVGKTAIVEGLAQRIINGEVPEGIKNKRVLSLDLGALVAGAKYRGEFEERLKAVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEK
Sbjct: 266 LAQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RYISDR
Sbjct: 326 DAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRYISDRK 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR IQLK+E +A+ +E DE+S +RL ++
Sbjct: 386 LPDKAIDLIDEAASSIRMQIDSKPEPLDRLERRTIQLKLEEQALSKESDEASLRRLSTLR 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
E+ ++E K A L ++W EK + +Q IK ++E+ R+ + A R D +S+L+YG
Sbjct: 446 SELAEVEAKAAELNEVWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYGR 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ +LE+ L +Q ++Q TLL+ KV EIAE++S+ TGIPVSK+++ E+EKL
Sbjct: 506 IPELEKQLDLAAQAEMQ------DMTLLRNKVSDVEIAEVLSKATGIPVSKMLEGEKEKL 559
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L++E L RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+
Sbjct: 560 LHMEEALHTRVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLA 619
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+
Sbjct: 620 KFLFDTEAAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEV 679
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKL 610
EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K
Sbjct: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDVIQERFGIASYAEMKS 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VMN V FRPEF+NRID+ +VF L ++I IA IQ++ LK +L + + +L++S A
Sbjct: 740 EVMNVVTHSFRPEFLNRIDESVVFHPLESEHIAHIAQIQIDNLKARLAEKDFELEVSDDA 799
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
L I+ GFD +YGAR + K++L + ++P A + G+L+ P +D
Sbjct: 800 LALIAQAGFDPVYGARPL---KRAL-----QQEVENPLAQKLLSGELLPGAPIKVDA 848
>gi|375264537|ref|YP_005021980.1| ClpB protein [Vibrio sp. EJY3]
gi|369839861|gb|AEX21005.1| ClpB protein [Vibrio sp. EJY3]
Length = 857
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLALDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLTTL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E +YA LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELTEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L +RV+GQ EA+ V+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHQRVIGQVEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAILDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L +++I SIA+IQL L +L + + DL++
Sbjct: 739 NEVMEVVSKHFRPEFLNRVDETVVFHPLGKEHIKSIASIQLERLHKRLAEKDYDLEVGDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ I+ +GFD +YGAR
Sbjct: 799 ALELIAQVGFDPVYGAR 815
>gi|70732609|ref|YP_262372.1| ATP-dependent chaperone protein ClpB [Pseudomonas protegens Pf-5]
gi|68346908|gb|AAY94514.1| ATP-dependent chaperone protein ClpB [Pseudomonas protegens Pf-5]
Length = 854
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/677 (62%), Positives = 552/677 (81%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDANV-----EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+++EI +LE +YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+Y
Sbjct: 444 LQEEIVRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 GVIPDLERSLQMVDQ------HGHSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+LL +RV+GQ+EA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLKMESLLHERVIGQNEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINR+D++++F L R I I IQL L+++L + + L++S
Sbjct: 737 AAVMDAVSTHFRPEFINRVDEVVIFEPLARDQIAGITQIQLGRLRSRLAERELSLELSDE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|257454777|ref|ZP_05620028.1| ATP-dependent chaperone protein ClpB [Enhydrobacter aerosaccus
SK60]
gi|257447710|gb|EEV22702.1| ATP-dependent chaperone protein ClpB [Enhydrobacter aerosaccus
SK60]
Length = 865
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/677 (59%), Positives = 547/677 (80%), Gaps = 1/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + +Q E+ L KYTIDLT +A GKLDPVIGRDDEIRR IQVL RR+KNNPVL
Sbjct: 142 GGDKVDTQNSEDQRDALNKYTIDLTARAESGKLDPVIGRDDEIRRTIQVLSRRTKNNPVL 201
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQ+I+NG+VP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 202 IGEPGVGKTAIVEGLAQKIVNGDVPEGLRNKRVLSLDLGALIAGAKFRGEFEERLKAVLN 261
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 262 DLAKSEGQVILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 321
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S RYI+DR
Sbjct: 322 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSNRYITDR 381
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA+++K+E+DSKPE + KL+ RLIQLK++ E +K E DE +K +L L+
Sbjct: 382 MLPDKAIDLVDEAASRLKMELDSKPEALGKLDSRLIQLKMQRETLKHEDDEGAKSQLKLL 441
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+I++LE +YA+L +IW+ EK L+K SQQ+K+E++K R+ KA R+ D++T+SKL+Y
Sbjct: 442 DTQISELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYEKAQREGDYETMSKLQYE 501
Query: 371 ELNKLERILKEKS-QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+ +LE+ +K+ + + A LL+ KV EIAE+V+ TGIPV+K++Q ERE
Sbjct: 502 TIPQLEKRIKDSDLAEQKEQAGEAPSVKLLRNKVTENEIAEVVAAATGIPVAKMMQGERE 561
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
K+L++E L +RVVGQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K
Sbjct: 562 KMLHMEEKLHERVVGQDEAVQAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKA 621
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L++ +F++E ++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRR+PYS++L D
Sbjct: 622 LASFLFDDENAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRRPYSVVLFD 681
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM E IK
Sbjct: 682 EVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMAGDSYEEIK 741
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVMN V +FRPEF+NRID+I+VF L ++ + IA+IQL+ L+ +L + +M++ +S
Sbjct: 742 AAVMNSVNQHFRPEFVNRIDEIVVFHPLGQEQMAGIADIQLSRLRKRLQERDMNIVLSDE 801
Query: 670 ALKKISNIGFDLIYGAR 686
A+ ++ +G+D +YGAR
Sbjct: 802 AMSQLVAVGYDPVYGAR 818
>gi|387121076|ref|YP_006286959.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|416032186|ref|ZP_11572737.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|416045010|ref|ZP_11575193.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|429732491|ref|ZP_19267101.1| ATP-dependent chaperone protein ClpB [Aggregatibacter
actinomycetemcomitans Y4]
gi|347995838|gb|EGY36981.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|348000240|gb|EGY41029.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|385875568|gb|AFI87127.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|429155999|gb|EKX98641.1| ATP-dependent chaperone protein ClpB [Aggregatibacter
actinomycetemcomitans Y4]
Length = 856
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/676 (60%), Positives = 542/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+KYTIDLT A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVNDQNAEESRQALEKYTIDLTACAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L + + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 505 KIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHAQEGYDTVKS 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM V YFRPEFINRID+ ++F LN++NI IA+IQL L ++ L + A
Sbjct: 739 MVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDAT 798
Query: 671 LKKISNIGFDLIYGAR 686
L IS+IG+D I+GAR
Sbjct: 799 LDFISDIGYDPIFGAR 814
>gi|424924967|ref|ZP_18348328.1| ClpB [Pseudomonas fluorescens R124]
gi|404306127|gb|EJZ60089.1| ClpB [Pseudomonas fluorescens R124]
Length = 854
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/676 (61%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAMKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AV+NA+RRSR+GL+D RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSSQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDALTAHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida KT2440]
gi|54035836|sp|Q88Q71.1|CLPB_PSEPK RecName: Full=Chaperone protein ClpB
gi|24982014|gb|AAN66250.1|AE016253_5 ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida KT2440]
Length = 854
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 545/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 215 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 395 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 515 MVDQ------HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|386010294|ref|YP_005928571.1| chaperone ClpB [Pseudomonas putida BIRD-1]
gi|313497000|gb|ADR58366.1| ClpB [Pseudomonas putida BIRD-1]
Length = 831
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/666 (62%), Positives = 545/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+DLT++A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 132 EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTA 191
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
I EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L E+S + II
Sbjct: 192 IAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQII 251
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+IEKDAA ERRFQ
Sbjct: 252 LFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQ 311
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 312 KVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLI 371
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKRL + +EI +LE +
Sbjct: 372 DEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLERE 431
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG + LER L+
Sbjct: 432 YSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQ 491
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + LL+ KV EEIAE+VS+ TGIPV+K+++ EREKLL +E LL +
Sbjct: 492 MVDQ------HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQ 545
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 546 RVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 605
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFN
Sbjct: 606 MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFN 665
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E + AVM+ V +F
Sbjct: 666 VLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQRAAVMDAVGAHF 724
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I I IQL L+++LL+ + L +S AL K+ +G+D
Sbjct: 725 RPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYD 784
Query: 681 LIYGAR 686
+YGAR
Sbjct: 785 PVYGAR 790
>gi|157376629|ref|YP_001475229.1| ATPase [Shewanella sediminis HAW-EB3]
gi|157319003|gb|ABV38101.1| ATPase AAA-2 domain protein [Shewanella sediminis HAW-EB3]
Length = 857
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/719 (59%), Positives = 556/719 (77%), Gaps = 21/719 (2%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
GKN+ E+ LKKYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLI
Sbjct: 146 GKNVDDPNAEDQRQALKKYTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E
Sbjct: 206 GEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
+ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEK
Sbjct: 266 LYQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+LVEEP++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S RY+SDR
Sbjct: 326 DAALERRFQKVLVEEPNVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSNRYVSDRK 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I+I+IDSKPE +DKLERR IQLK+E +A+ +E DE+S +RL I+
Sbjct: 386 LPDKAIDLIDEAASSIRIQIDSKPEPLDKLERRSIQLKLEEQALSKETDEASLRRLYSIR 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
KE+ ++ K + L +IW EK + +Q IK ++E+ RL ++ A R SD +S+L+YG
Sbjct: 446 KELRSVDAKASELNEIWHTEKASLAGTQHIKADLEQARLDLDVARRASDLTRMSELQYGR 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ +LE+ L SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ E+EKL
Sbjct: 506 IPELEKQLDLASQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLEGEKEKL 559
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L++E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+
Sbjct: 560 LHMEEALHSRVIGQNEAVDAVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELCKALA 619
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+
Sbjct: 620 KFLFDTESALVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEV 679
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EMEKGDKEI 607
EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ E+ G+
Sbjct: 680 EKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDVIQDRFTELSYGE--- 736
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
+K VMN V FRPEF+NRID+ +VF L+ K+I IA IQ+ L+ +L + +L +S
Sbjct: 737 MKSEVMNVVVHSFRPEFLNRIDETVVFHPLDEKHIKHIAGIQIESLRQRLAEKEFELILS 796
Query: 668 KAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL I+ GFD IYGAR + K++L + ++P A I G L+ P +D
Sbjct: 797 DEALALIARAGFDPIYGARPL---KRAL-----QQEVENPLAQKILSGSLVPGKPIKID 847
>gi|392556409|ref|ZP_10303546.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas undina
NCIMB 2128]
Length = 858
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/677 (61%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLKIE A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPEALDKLERRIIQLKIEDNALAKEKDEASQKRRAEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ I +LE++Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG
Sbjct: 445 VELITELEVQYRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + +LLK +VG +EIAEI+SR TGIPV++++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVARMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEEQLHNKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGYMFDTESAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D + +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQSGSNDYDELK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM + FRPEFINRID+ +VF L +I IA+IQL+ L+ +L +M L+++ A
Sbjct: 739 AKVMGVLHNEFRPEFINRIDETVVFHSLAHSHIKEIADIQLSKLRERLTEMGYLLELTDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL++I+ GFD +YGAR
Sbjct: 799 ALERIAASGFDPVYGAR 815
>gi|392536450|ref|ZP_10283587.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas arctica A
37-1-2]
Length = 858
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/677 (61%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKIDDPNAEETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRAEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I L+ +Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG
Sbjct: 445 QELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + TLLK +VG +EIAEI+SR TGIPV++++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEDKLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM + FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS A
Sbjct: 739 AKVMEVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL++I+ GFD +YGAR
Sbjct: 799 ALERIAESGFDPVYGAR 815
>gi|387813183|ref|YP_005428664.1| ATP-dependent protease [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338194|emb|CCG94241.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 859
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/678 (61%), Positives = 540/678 (79%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ EE+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR KNNPVL
Sbjct: 145 GGESVNDAGAEENRQALSKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+ L KK+L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYR+ IE
Sbjct: 265 ELSKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRENIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL +
Sbjct: 385 QLPDKAIDLVDEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKKRLEEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
I +E +YA+LE++W EK + SQ+IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 SAVIGNVEREYADLEEVWNTEKAALHGSQKIKSQLEQARIDLENARRAGDLGKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LER L SQ ++ + LL+ +V EEIAEIVS+ TGIPVSK+++ ER+K
Sbjct: 505 KIPELERQLDMASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E L RV+GQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LMRMEEALHDRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS I+E + G++ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSHIIQE-KAGEENYEDM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V +FRPEFINR+D+++VF L I IA IQ+ L +L +M L++
Sbjct: 738 KSAVMEVVGTHFRPEFINRVDEVVVFHPLAESQIQGIARIQIENLARRLKDQDMKLELGD 797
Query: 669 AALKKISNIGFDLIYGAR 686
++ ++ +G+D +YGAR
Sbjct: 798 DVMQLLAEVGYDPVYGAR 815
>gi|397685796|ref|YP_006523115.1| ClpB protein [Pseudomonas stutzeri DSM 10701]
gi|395807352|gb|AFN76757.1| ClpB protein [Pseudomonas stutzeri DSM 10701]
Length = 854
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/676 (61%), Positives = 549/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+D+T +A G+LDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNAEESRQALDKYTVDMTRRAEEGRLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEDDEATMKRLAKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG
Sbjct: 445 EEEVVKLEKEYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ ER L+ Q + ++ LL+ KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 IIPDFERSLQMVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+LL +RV+GQ EA+ +V+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEDLLHQRVIGQHEAVVSVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 AEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD + +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSTQIQEL-VGDPDAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ V +FRPEFINRID+++VF L ++ I IA IQL L+ +L + + L++S A
Sbjct: 738 AVMDAVSSHFRPEFINRIDEVVVFDPLAKEQIAGIAQIQLERLRQRLAERELSLQLSDEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLVAVGYDPVYGAR 813
>gi|425066581|ref|ZP_18469701.1| ClpB protein [Pasteurella multocida subsp. gallicida P1059]
gi|404381369|gb|EJZ77846.1| ClpB protein [Pasteurella multocida subsp. gallicida P1059]
Length = 855
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/676 (60%), Positives = 538/676 (79%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 144 GGQNVNDPNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 264 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR
Sbjct: 324 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 384 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDEASRKRLAML 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+++ E +YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG
Sbjct: 444 EKELSEKEREYAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L + + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 504 VIPALEKQLAQAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 558 LLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 618 ANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K
Sbjct: 678 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYPSMKE 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI IA IQL L ++ L + A
Sbjct: 738 LVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDAC 797
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D +YGAR
Sbjct: 798 LDFIGEVGYDPVYGAR 813
>gi|359451408|ref|ZP_09240809.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20480]
gi|358042627|dbj|GAA77058.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20480]
Length = 858
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/677 (62%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKFRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRSEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I L+ +Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG
Sbjct: 445 QELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q TLLK +VG +EIAEI+SR TGIPVS+++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------DMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEDRLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D I+K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYAILK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ + FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS A
Sbjct: 739 SKVMDVLISEFRPEFINRIDETVVFHPLANQHIKEIADIQLMKLRERLTEMGYLLEISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 799 ALDTIAASGFDPVYGAR 815
>gi|444376517|ref|ZP_21175759.1| ClpB protein [Enterovibrio sp. AK16]
gi|443679337|gb|ELT85995.1| ClpB protein [Enterovibrio sp. AK16]
Length = 857
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L+K+TIDLTEKA GKLDPVIGRD+EIRR +QVLQRR+KNNPV+
Sbjct: 145 GGQAINDPNAEEARQALEKFTIDLTEKAEQGKLDPVIGRDEEIRRTVQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRNKRVLSLDMGSLVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 ELAKEEGNVILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHAVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERRLIQLKIE +A+ +E DE+SKKRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEQLDRLERRLIQLKIEQQALAKENDEASKKRLESL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI++ E YA LE++W EK + +Q IK +E+ R ++ A R D +S+L+YG
Sbjct: 445 QSEIDEKERDYAELEEVWNAEKAALSGTQHIKSALEQARTDLDIARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q + TLLK +V EIAE++SR TGIPV+K+++ E+EK
Sbjct: 505 RIPELEKQLDLASQAEMQ------EMTLLKNRVTDAEIAEVLSRQTGIPVAKMLEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ EA+++V+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLQMEDELHGRVIGQSEAVTSVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDSSDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN +++MTSNLGSD+I+E + D IK
Sbjct: 679 VEKAHPDVFNLLLQVLDDGRLTDGQGRTVDFRNAVVIMTSNLGSDRIQEHFGELDYNGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINR+D+ +VF L +++I SIA IQL L ++ + ++ L+++
Sbjct: 739 AMVMDVVGKHFRPEFINRVDESVVFHPLGQEHIKSIAGIQLAHLAKRMAERDLKLEVTDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I++ GFD +YGAR
Sbjct: 799 ALTLIADAGFDPVYGAR 815
>gi|387825396|ref|YP_005824867.1| ClpB protein [Francisella cf. novicida 3523]
gi|332184862|gb|AEE27116.1| ClpB protein [Francisella cf. novicida 3523]
Length = 859
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/676 (59%), Positives = 549/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNNEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI LE +Y E++WK EK ++ + ++KE++EK + ++ K R D +++L+YG
Sbjct: 445 ETEIKGLESEYQGFEELWKAEKLKMQGASKLKEQLEKTKFELEKYQRAGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE +RRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHIRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D +I+K
Sbjct: 681 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYDIVKD 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +N+ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLRDLNIGLEVTAKA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|443468563|ref|ZP_21058770.1| ClpB protein [Pseudomonas pseudoalcaligenes KF707]
gi|442897782|gb|ELS24599.1| ClpB protein [Pseudomonas pseudoalcaligenes KF707]
Length = 854
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/686 (61%), Positives = 556/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L K+T+DLT++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAIANLRGGQAVNDPNVEESRQALDKFTVDLTKRAEDGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAI EGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKGVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEED 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E++KKRL ++++I KLE +YA+LE+IWK EK ++ S QI+++IE+ R + A RK D
Sbjct: 435 EATKKRLAKLEEDILKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQARQDMEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
Q +++L+YG + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LQRMAELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
+K+++ EREKLL +E+ L KRV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 AKMMEGEREKLLRMEDELHKRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE+++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKALAEFLFDTEEALVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++L+DE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+
Sbjct: 669 KPYSVVLMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSTQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD+E + AVM+ V +FRPEFINRID+++VF L R I IA IQL L+ +L++
Sbjct: 729 -VGDREAQRAAVMDAVGNHFRPEFINRIDEVVVFEPLGRDQIGGIAEIQLQRLRKRLVER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L++S AL K+ +G+D +YGAR
Sbjct: 788 ELSLELSPEALDKLIAVGYDPVYGAR 813
>gi|389681723|ref|ZP_10173067.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis O6]
gi|388554258|gb|EIM17507.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis O6]
Length = 854
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/677 (62%), Positives = 551/677 (81%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDANV-----EESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+++EI +LE +YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+Y
Sbjct: 444 LQEEITRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 GVIPDLERSLQMVDQ------HGQSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+LL +RV+GQ+EA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLKMESLLHQRVIGQNEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID++++F L R I I IQL L+ +L + + L++S
Sbjct: 737 AAVMDAVSSHFRPEFINRIDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELKLELSGE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|416068136|ref|ZP_11582660.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348001380|gb|EGY42128.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 856
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/676 (60%), Positives = 542/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+KYT+DLT A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVNDQNAEESRQALEKYTMDLTACAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L + + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 505 KIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHAQEGYDTVKS 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM V YFRPEFINRID+ ++F LN++NI IA+IQL L ++ L + A
Sbjct: 739 MVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDAT 798
Query: 671 LKKISNIGFDLIYGAR 686
L IS+IG+D I+GAR
Sbjct: 799 LDFISDIGYDPIFGAR 814
>gi|254375107|ref|ZP_04990587.1| hypothetical protein FTDG_01296 [Francisella novicida GA99-3548]
gi|151572825|gb|EDN38479.1| hypothetical protein FTDG_01296 [Francisella novicida GA99-3548]
Length = 859
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/676 (59%), Positives = 551/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNNEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI L+ +Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K
Sbjct: 681 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKS 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|429212832|ref|ZP_19203997.1| ClpB protein [Pseudomonas sp. M1]
gi|428157314|gb|EKX03862.1| ClpB protein [Pseudomonas sp. M1]
Length = 854
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/676 (61%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNAEESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG
Sbjct: 445 EEDIAKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKTELELARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPDLERSLQMVDQ------HGKAENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDELHKRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE
Sbjct: 619 AEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-VGDQEAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ V +FRPEFINRID+++VF L R+ I IA IQ+ L+ +L + + L++S A
Sbjct: 738 AVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQMGRLRKRLAERELSLELSTEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +GFD +YGAR
Sbjct: 798 MDKLIAVGFDPVYGAR 813
>gi|126173263|ref|YP_001049412.1| ATPase [Shewanella baltica OS155]
gi|152999622|ref|YP_001365303.1| ATPase [Shewanella baltica OS185]
gi|160874241|ref|YP_001553557.1| ATPase AAA-2 domain-containing protein [Shewanella baltica OS195]
gi|217974426|ref|YP_002359177.1| ATP-dependent chaperone ClpB [Shewanella baltica OS223]
gi|373948486|ref|ZP_09608447.1| ATP-dependent chaperone ClpB [Shewanella baltica OS183]
gi|378707486|ref|YP_005272380.1| ATP-dependent chaperone ClpB [Shewanella baltica OS678]
gi|386325670|ref|YP_006021787.1| ATP-dependent chaperone ClpB [Shewanella baltica BA175]
gi|386340025|ref|YP_006036391.1| ATP-dependent chaperone ClpB [Shewanella baltica OS117]
gi|418024125|ref|ZP_12663108.1| ATP-dependent chaperone ClpB [Shewanella baltica OS625]
gi|125996468|gb|ABN60543.1| ATPase AAA-2 domain protein [Shewanella baltica OS155]
gi|151364240|gb|ABS07240.1| ATPase AAA-2 domain protein [Shewanella baltica OS185]
gi|160859763|gb|ABX48297.1| ATP-dependent chaperone ClpB [Shewanella baltica OS195]
gi|217499561|gb|ACK47754.1| ATP-dependent chaperone ClpB [Shewanella baltica OS223]
gi|315266475|gb|ADT93328.1| ATP-dependent chaperone ClpB [Shewanella baltica OS678]
gi|333819815|gb|AEG12481.1| ATP-dependent chaperone ClpB [Shewanella baltica BA175]
gi|334862426|gb|AEH12897.1| ATP-dependent chaperone ClpB [Shewanella baltica OS117]
gi|353536085|gb|EHC05644.1| ATP-dependent chaperone ClpB [Shewanella baltica OS625]
gi|373885086|gb|EHQ13978.1| ATP-dependent chaperone ClpB [Shewanella baltica OS183]
Length = 857
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/716 (58%), Positives = 559/716 (78%), Gaps = 21/716 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVL
Sbjct: 145 GGQKVDDPNAEDQRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELAQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL +
Sbjct: 385 KLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLDHL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ +E K + L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 QEELRDVEAKASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREK
Sbjct: 505 RIPELEKQLDLASQAEMQ------DMTLLRNKVTEFEIAEVLSKATGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ARFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--- 607
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G ++
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFGQVTYA 735
Query: 608 -IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K AVMN V FRPEF+NRID+ +VF L+ NI IA+IQ+ L+ +L + + L+I
Sbjct: 736 EMKAAVMNVVTHSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKDYTLEI 795
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 722
+ AL I+ IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 796 TDDALSLIAEIGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGKP 843
>gi|398964715|ref|ZP_10680492.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM30]
gi|398148101|gb|EJM36789.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM30]
Length = 854
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/676 (61%), Positives = 551/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAMKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AV+NA+RRSR+GL+D RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSSQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|410614264|ref|ZP_11325313.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
gi|410166186|dbj|GAC39202.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
Length = 856
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/677 (61%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ L K+T DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVTDQNAEDVRQALDKFTTDLTARAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINSEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE MDKLERR+IQLK+E +A+ +E DE+S KRL LI
Sbjct: 385 QLPDKAIDLIDEAASSIRLQMDSKPEDMDKLERRIIQLKLEEQALSKEKDEASHKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E + E K++ E IW EK ++ +Q I+ E+E+ +L + A R SD +S+L+YG
Sbjct: 445 ELEREQAEHKFSAFETIWIAEKQAMQGTQTIRSELEQAKLDLEIARRASDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE L+ ++ + Q + TLLK KV EIA+++SR TGIPVSK+++ E+ K
Sbjct: 505 RIPELEAKLEVATESETQ------ETTLLKNKVTESEIADVLSRWTGIPVSKMLEGEKVK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRVVGQ EA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLAMEEALHKRVVGQSEAVTAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS++R++GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDTENAMVRIDMSEFMEKHSVARMVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E+ + + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEVSGESNYQQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VMN V +FRPEF+NR+DDI+VF L ++ I +IA IQL L+ +L + L++S
Sbjct: 739 GLVMNAVGEHFRPEFLNRVDDIVVFHPLGKEQIKAIAKIQLCSLRERLAEKGYKLELSLE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL KI++ GFD +YGAR
Sbjct: 799 ALDKIADAGFDPVYGAR 815
>gi|208780138|ref|ZP_03247481.1| ATPase family associated with various cellular activities (AAA)
protein [Francisella novicida FTG]
gi|208744142|gb|EDZ90443.1| ATPase family associated with various cellular activities (AAA)
protein [Francisella novicida FTG]
Length = 859
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/676 (59%), Positives = 551/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI L+ +Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K
Sbjct: 681 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKS 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTDA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|336312569|ref|ZP_08567517.1| ClpB protein [Shewanella sp. HN-41]
gi|335863813|gb|EGM68935.1| ClpB protein [Shewanella sp. HN-41]
Length = 857
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/716 (58%), Positives = 561/716 (78%), Gaps = 21/716 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVL
Sbjct: 145 GGQKVDDPNAEDQRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELAQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE++D+LERR IQLK+E +A+ +E DE+S++RL +
Sbjct: 385 KLPDKAIDLIDEAASSIRMQMDSKPELLDRLERRAIQLKLEEQALAKENDEASRRRLDHL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E++++E K + L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 RVELHEVEAKASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREK
Sbjct: 505 RIPELEKQLDLASQAEMQ------DMTLLRNKVTELEIAEVLSKATGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ARFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E + G+
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQEGFGHVSYGE-- 736
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K +VMN V FRPEF+NRID+ +VF L+ NI IA+IQ+ L+ +L + + L+I
Sbjct: 737 -MKASVMNVVTHSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKDYTLEI 795
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 722
+ AL I+ IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 796 TDDALSLIAEIGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGKP 843
>gi|254371967|ref|ZP_04987460.1| ClpB protein [Francisella tularensis subsp. novicida GA99-3549]
gi|151569698|gb|EDN35352.1| ClpB protein [Francisella novicida GA99-3549]
Length = 859
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/676 (59%), Positives = 551/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI L+ +Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K
Sbjct: 681 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKS 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTDA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|212558156|gb|ACJ30610.1| AAA ATPase, central region:Clp, N terminal [Shewanella
piezotolerans WP3]
Length = 857
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
NG+N+ E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVL
Sbjct: 145 NGQNVDDPNAEDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPNVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSNRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+I+IDSKPE +DKLERR IQLK+E +A+ +E DE+S +RL ++
Sbjct: 385 KLPDKAIDLIDEAASSIRIQIDSKPESLDKLERRAIQLKLEEQAVSKEEDEASLRRLDVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ ++E K L +IW EK + +Q IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 RSELKEVEGKAGELNEIWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------DMTLLRNKVTDIEIAEVLSKATGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ +VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLQMEDALHERVIGQNEAVDSVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AKFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDAIQAGFGSQNYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF LN++NI IA+IQ++ LK +L + +L IS
Sbjct: 739 SNVMQVVTQHFRPEFLNRVDESVVFHPLNKENIAHIASIQIDGLKQRLADKDYELSISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ G+D IYGAR
Sbjct: 799 ALAIIAEAGYDPIYGAR 815
>gi|113971326|ref|YP_735119.1| ATPase [Shewanella sp. MR-4]
gi|114048563|ref|YP_739113.1| ATPase [Shewanella sp. MR-7]
gi|117921607|ref|YP_870799.1| ATPase [Shewanella sp. ANA-3]
gi|113886010|gb|ABI40062.1| ATPase AAA-2 domain protein [Shewanella sp. MR-4]
gi|113890005|gb|ABI44056.1| ATPase AAA-2 domain protein [Shewanella sp. MR-7]
gi|117613939|gb|ABK49393.1| ATPase AAA-2 domain protein [Shewanella sp. ANA-3]
Length = 857
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/713 (58%), Positives = 559/713 (78%), Gaps = 15/713 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVL
Sbjct: 145 GGQNVDDPNAEDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELAQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL +
Sbjct: 385 KLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLEHL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E++++E K + L +IW+ EK + +Q IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 RVELHEVEAKASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREK
Sbjct: 505 RIPELEKQLDLASQAEMQ------DMTLLRNKVTDLEIAEVLSKATGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AKFLFDTESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQEGFGHLSYSEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVMN V FRPEF+NRID+ +VF L+ +NI IA+IQ+ L+ +L + + L+I+
Sbjct: 739 SAVMNVVTHSFRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKDYTLEITDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 722
AL I+ IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 799 ALSLIAEIGFDPVYGARPL---KRAL-----QQEMENPLAQKLLRGDLLPGKP 843
>gi|422641872|ref|ZP_16705293.1| AAA ATPase, central region, partial [Pseudomonas syringae Cit 7]
gi|330954257|gb|EGH54517.1| AAA ATPase, central region [Pseudomonas syringae Cit 7]
Length = 793
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/657 (63%), Positives = 534/657 (81%), Gaps = 12/657 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIQRLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GIIPDLERSLQMVDQHGK--PEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSLILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + L I
Sbjct: 737 AAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELLLNI 793
>gi|187930962|ref|YP_001890946.1| chaperone ClpB [Francisella tularensis subsp. mediasiatica FSC147]
gi|187711871|gb|ACD30168.1| chaperone ClpB [Francisella tularensis subsp. mediasiatica FSC147]
Length = 859
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/676 (59%), Positives = 551/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI L+ +Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++D+FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K
Sbjct: 681 VEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKS 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|378775645|ref|YP_005177888.1| chaperone protein ClpB [Pasteurella multocida 36950]
gi|356598193|gb|AET16919.1| chaperone protein ClpB [Pasteurella multocida 36950]
Length = 855
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/676 (60%), Positives = 537/676 (79%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 144 GGQNVNDPNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 264 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR
Sbjct: 324 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 384 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAML 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG
Sbjct: 444 EKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L + + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 504 VIPALEKQLAQAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 558 LLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 618 ANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K
Sbjct: 678 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYSSMKE 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI IA IQL L ++ L + A
Sbjct: 738 LVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDAC 797
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D +YGAR
Sbjct: 798 LDFIGEVGYDPVYGAR 813
>gi|56708764|ref|YP_170660.1| ClpB protein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110671236|ref|YP_667793.1| ClpB protein [Francisella tularensis subsp. tularensis FSC198]
gi|254371373|ref|ZP_04987374.1| ClpB protein [Francisella tularensis subsp. tularensis FSC033]
gi|254875628|ref|ZP_05248338.1| clpB protein [Francisella tularensis subsp. tularensis MA00-2987]
gi|379717990|ref|YP_005306326.1| ClpB protein [Francisella tularensis subsp. tularensis TIGB03]
gi|379726593|ref|YP_005318779.1| ClpB protein [Francisella tularensis subsp. tularensis TI0902]
gi|385795553|ref|YP_005831959.1| ClpB protein [Francisella tularensis subsp. tularensis NE061598]
gi|421756433|ref|ZP_16193345.1| ClpB protein [Francisella tularensis subsp. tularensis 80700075]
gi|56605256|emb|CAG46402.1| ClpB protein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110321569|emb|CAL09785.1| ClpB protein [Francisella tularensis subsp. tularensis FSC198]
gi|151569612|gb|EDN35266.1| ClpB protein [Francisella tularensis subsp. tularensis FSC033]
gi|254841627|gb|EET20063.1| clpB protein [Francisella tularensis subsp. tularensis MA00-2987]
gi|282160088|gb|ADA79479.1| ClpB protein [Francisella tularensis subsp. tularensis NE061598]
gi|377828042|gb|AFB81290.1| ClpB protein [Francisella tularensis subsp. tularensis TI0902]
gi|377829667|gb|AFB79746.1| ClpB protein [Francisella tularensis subsp. tularensis TIGB03]
gi|409084423|gb|EKM84599.1| ClpB protein [Francisella tularensis subsp. tularensis 80700075]
Length = 859
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/676 (59%), Positives = 551/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI L+ +Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++D+FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K
Sbjct: 681 VEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKS 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTGA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|120553812|ref|YP_958163.1| ATPase [Marinobacter aquaeolei VT8]
gi|120323661|gb|ABM17976.1| ATPase AAA-2 domain protein [Marinobacter aquaeolei VT8]
Length = 859
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/678 (61%), Positives = 540/678 (79%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ EE+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR KNNPVL
Sbjct: 145 GGESVNDAGAEENRQALSKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+ L KK+L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYR+ IE
Sbjct: 265 ELSKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRENIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL +
Sbjct: 385 QLPDKAIDLVDEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKKRLEEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
I +E +YA+LE++W EK + SQ+IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 SAVIGNVEREYADLEEVWNTEKAALHGSQKIKSQLEQARIDLENARRAGDLGKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LER L SQ ++ + LL+ +V EEIAEIVS+ TGIPVSK+++ ER+K
Sbjct: 505 KIPELERQLDMASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E L RV+GQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LMRMEEALHDRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS I+E + G++ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSHIIQE-KAGEENYEDM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V +FRPEFINR+D+++VF L I IA IQ+ L +L +M L++
Sbjct: 738 KSAVMEVVGSHFRPEFINRVDEVVVFHPLAESQIQGIARIQIENLARRLKDQDMKLELGD 797
Query: 669 AALKKISNIGFDLIYGAR 686
++ ++ +G+D +YGAR
Sbjct: 798 DVMQLLAEVGYDPVYGAR 815
>gi|237801872|ref|ZP_04590333.1| clpB protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024730|gb|EGI04786.1| clpB protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 854
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/677 (62%), Positives = 547/677 (80%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERLKSLL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R+ D +++L+Y
Sbjct: 444 LQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q P N LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 GIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLRMETLLHNRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L + + + +S
Sbjct: 737 AAVMDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSPE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|399543782|ref|YP_006557090.1| chaperone protein ClpB [Marinobacter sp. BSs20148]
gi|399159114|gb|AFP29677.1| Chaperone protein ClpB [Marinobacter sp. BSs20148]
Length = 858
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/678 (60%), Positives = 547/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ EE+ L KYTIDLTE A GKLDPVIGRDDEIRR IQVLQRR KNNPVL
Sbjct: 145 GGESVDDAGAEENRQALDKYTIDLTEMAESGKLDPVIGRDDEIRRTIQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG+PGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +LK
Sbjct: 205 IGDPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR++IE
Sbjct: 265 ELTKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRKHIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+T++ILRGL+++YEVHHGVEITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVEITDSAIIAAAKLSSRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEA ++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKKRL +
Sbjct: 385 KLPDKAIDLVDEAGSQIRMEMDSKPEPLDRLERRLIQLKIEREALKKETDPASKKRLEEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
I+ +E +YA+LE++W EK + SQ+IK E+E+ R ++ A R D +S+L+YG
Sbjct: 445 SSVIDGVEREYADLEEVWNAEKAALHGSQKIKSELEQARTELESARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++ + TLL+ +V EEIAEIVS+ TGIPVSK+++ ER+K
Sbjct: 505 HIPELERQLDMASQAEMM------EMTLLRNRVTEEEIAEIVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E L KRV+GQ+EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LMRMEEALHKRVIGQNEAVEAVANAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ +++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ASFLFDTDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I+ G++ + +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSGIIQR-HAGEENYDAM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM+EV +FRPEFINR+D+++VF L I IA +Q+ +L +L + ++ L++ +
Sbjct: 738 KALVMDEVGTHFRPEFINRVDEVVVFHPLEANQIRGIAKVQIELLDKRLRQQDIALELDE 797
Query: 669 AALKKISNIGFDLIYGAR 686
+A+ ++N+G+D +YGAR
Sbjct: 798 SAMTLLANVGYDPVYGAR 815
>gi|15603569|ref|NP_246643.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. Pm70]
gi|425064424|ref|ZP_18467549.1| ClpB protein [Pasteurella multocida subsp. gallicida X73]
gi|54035898|sp|Q9CKC0.1|CLPB_PASMU RecName: Full=Chaperone protein ClpB
gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. multocida str. Pm70]
gi|404381174|gb|EJZ77657.1| ClpB protein [Pasteurella multocida subsp. gallicida X73]
Length = 855
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/676 (60%), Positives = 537/676 (79%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 144 GGQNVNDPNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 264 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR
Sbjct: 324 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 384 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAML 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG
Sbjct: 444 EKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L + + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 504 VIPALEKQLAQAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 558 LLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 618 ANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K
Sbjct: 678 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYPSMKE 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI IA IQL L ++ L + A
Sbjct: 738 LVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDAC 797
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D +YGAR
Sbjct: 798 LDFIGEVGYDPVYGAR 813
>gi|89255534|ref|YP_512895.1| ClpB protein [Francisella tularensis subsp. holarctica LVS]
gi|115314050|ref|YP_762773.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
gi|156501472|ref|YP_001427537.1| AAA ATPase [Francisella tularensis subsp. holarctica FTNF002-00]
gi|254366960|ref|ZP_04982997.1| clpB protein [Francisella tularensis subsp. holarctica 257]
gi|290954297|ref|ZP_06558918.1| AAA family ATPase [Francisella tularensis subsp. holarctica URFT1]
gi|422938054|ref|YP_007011201.1| chaperone clpB [Francisella tularensis subsp. holarctica FSC200]
gi|423049840|ref|YP_007008274.1| AAA ATPase [Francisella tularensis subsp. holarctica F92]
gi|89143365|emb|CAJ78535.1| ClpB protein [Francisella tularensis subsp. holarctica LVS]
gi|115128949|gb|ABI82136.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
gi|134252787|gb|EBA51881.1| clpB protein [Francisella tularensis subsp. holarctica 257]
gi|156252075|gb|ABU60581.1| ATPase, AAA family [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|407293205|gb|AFT92111.1| chaperone clpB [Francisella tularensis subsp. holarctica FSC200]
gi|421950562|gb|AFX69811.1| AAA ATPase [Francisella tularensis subsp. holarctica F92]
Length = 859
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/676 (59%), Positives = 551/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI L+ +Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++D+FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K
Sbjct: 681 VEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKS 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|383311735|ref|YP_005364545.1| chaperone protein ClpB [Pasteurella multocida subsp. multocida str.
HN06]
gi|386835582|ref|YP_006240901.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. 3480]
gi|380873007|gb|AFF25374.1| chaperone protein ClpB [Pasteurella multocida subsp. multocida str.
HN06]
gi|385202287|gb|AFI47142.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. 3480]
Length = 855
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/676 (60%), Positives = 537/676 (79%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 144 GGQNVNDPNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 264 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR
Sbjct: 324 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 384 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAML 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG
Sbjct: 444 EKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L + + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 504 VIPALEKQLAQAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 558 LLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 618 ANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K
Sbjct: 678 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYPSMKE 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI IA IQL L ++ L + A
Sbjct: 738 LVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDAC 797
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D +YGAR
Sbjct: 798 LDFIGEVGYDPVYGAR 813
>gi|359440613|ref|ZP_09230527.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20429]
gi|358037648|dbj|GAA66776.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20429]
Length = 858
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/677 (61%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRAEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I L+ +Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG
Sbjct: 445 QELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + TLLK +VG +EIAEI+SR TGIPV++++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEDKLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM + FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS A
Sbjct: 739 AKVMEVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL++I+ GFD +YGAR
Sbjct: 799 ALERIAESGFDPVYGAR 815
>gi|134301181|ref|YP_001121149.1| AAA ATPase [Francisella tularensis subsp. tularensis WY96-3418]
gi|421750900|ref|ZP_16187962.1| AAA ATPase [Francisella tularensis subsp. tularensis AS_713]
gi|421752757|ref|ZP_16189771.1| AAA ATPase [Francisella tularensis subsp. tularensis 831]
gi|421756486|ref|ZP_16193394.1| AAA ATPase [Francisella tularensis subsp. tularensis 80700103]
gi|421758352|ref|ZP_16195202.1| AAA ATPase [Francisella tularensis subsp. tularensis 70102010]
gi|424673593|ref|ZP_18110529.1| AAA ATPase [Francisella tularensis subsp. tularensis 70001275]
gi|134048958|gb|ABO46029.1| AAA superfamily ATPase clpB [Francisella tularensis subsp.
tularensis WY96-3418]
gi|409089432|gb|EKM89475.1| AAA ATPase [Francisella tularensis subsp. tularensis 831]
gi|409089461|gb|EKM89503.1| AAA ATPase [Francisella tularensis subsp. tularensis AS_713]
gi|409092604|gb|EKM92574.1| AAA ATPase [Francisella tularensis subsp. tularensis 70102010]
gi|409093527|gb|EKM93468.1| AAA ATPase [Francisella tularensis subsp. tularensis 80700103]
gi|417435757|gb|EKT90630.1| AAA ATPase [Francisella tularensis subsp. tularensis 70001275]
Length = 859
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/676 (59%), Positives = 551/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI L+ +Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA++D+FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K
Sbjct: 681 IEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKS 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|254876196|ref|ZP_05248906.1| chaperone clpB [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842217|gb|EET20631.1| chaperone clpB [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 859
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/676 (59%), Positives = 548/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI LE +Y E++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EAEIKGLESEYQGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D + +K
Sbjct: 681 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYDTVKD 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NRIDD IVF LN++ I IA IQ+ L+ +L +N+ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRIDDAIVFEPLNKEMITEIAKIQIKRLEKRLRDLNIGLEVTAKA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|254368513|ref|ZP_04984530.1| ClpB protein [Francisella tularensis subsp. holarctica FSC022]
gi|157121407|gb|EDO65608.1| ClpB protein [Francisella tularensis subsp. holarctica FSC022]
Length = 859
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/676 (59%), Positives = 551/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI L+ +Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++D+FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D E +K
Sbjct: 681 VEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYETVKS 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|89075037|ref|ZP_01161478.1| putative clpB, ATPase with chaperone activity [Photobacterium sp.
SKA34]
gi|89049124|gb|EAR54689.1| putative clpB, ATPase with chaperone activity [Photobacterium sp.
SKA34]
Length = 858
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/677 (61%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE+ L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDPNAEENRQALEKYTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEDGRVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E D +S KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKEDDAASNKRLSDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +YA LE++W EK + +Q IK E+E+ R + A R D +S+L+YG
Sbjct: 445 LEELDLKEREYAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLLK KV EIA+++S+ TGIPVSK+++ ER+K
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQDEA+ AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEDELHHRVIGQDEAVVAVANAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFMFDSEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E D E IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGNLDYEGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINR+D+ +VF L ++NI +IA+IQL LK +L + + L + +
Sbjct: 739 ALVMDVVGQHFRPEFINRVDETVVFHPLGKENIKNIASIQLERLKKRLAENDFRLDVEDS 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 799 ALDMIAEAGFDPVYGAR 815
>gi|315126101|ref|YP_004068104.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas sp. SM9913]
gi|315014615|gb|ADT67953.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas sp. SM9913]
Length = 858
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/677 (61%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLKIE A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPEALDKLERRIIQLKIEDNALAKEKDEASQKRRTEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ I +LE +Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG
Sbjct: 445 VELITELEGQYRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + +LLK +VG +EIAEI+SR TGIPV++++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVARMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEEQLHNKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGYMFDTESAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D + +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGSNDYDELK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM + FRPEFINRID+ +VF L+ +I IA+IQL+ L+ +L +M L+++ A
Sbjct: 739 AKVMGVLHNEFRPEFINRIDETVVFHSLSHSHIKEIADIQLSKLRQRLTEMGYLLELTDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL++I+ GFD +YGAR
Sbjct: 799 ALERIAASGFDPVYGAR 815
>gi|421494136|ref|ZP_15941488.1| CLPB [Morganella morganii subsp. morganii KT]
gi|455738463|ref|YP_007504729.1| ClpB protein [Morganella morganii subsp. morganii KT]
gi|400191693|gb|EJO24837.1| CLPB [Morganella morganii subsp. morganii KT]
gi|455420026|gb|AGG30356.1| ClpB protein [Morganella morganii subsp. morganii KT]
Length = 857
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGAEDQRQALKKYTIDLTERAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRG+FE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGALLAGAKYRGDFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+L+RR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +YA+LE+ WK EK + +Q IK E+E+ + + +A R D +S+L+YG
Sbjct: 445 EQELTEKEREYASLEEEWKAEKATLSGTQHIKAELEQAKTALEQARRTGDLTKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLAAANAAE------DKEMKLLRNKVTDVEIAEILARWTGIPVSRMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E ++ RV+GQDEA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQVMHSRVIGQDEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ADFLFDSDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD+I+E + + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDRIQEHFGELNYDAMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINRID+++VF L ++ I +IA IQL L +L + + I+ +
Sbjct: 739 GAVMEVVSHHFRPEFINRIDEVVVFHPLAKEQIHAIAKIQLKRLYKRLEEHGYQVTITDS 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL K++ GFD ++GAR
Sbjct: 799 ALDKLAEAGFDPVFGAR 815
>gi|417854553|ref|ZP_12499843.1| ClpB [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|338217755|gb|EGP03595.1| ClpB [Pasteurella multocida subsp. multocida str. Anand1_goat]
Length = 855
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/676 (60%), Positives = 537/676 (79%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 144 GGQNVNDPNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 264 ELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR
Sbjct: 324 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 384 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAML 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE +WK EK + +Q IK E++ + ++ +A R SD+ +S+L+YG
Sbjct: 444 EKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L + + + TLL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 504 VIPALEKQLAQAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 558 LLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 618 ANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E D +K
Sbjct: 678 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDYPNMKE 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI IA IQL L ++ L + A
Sbjct: 738 LVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDAC 797
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D +YGAR
Sbjct: 798 LDFIGEVGYDPVYGAR 813
>gi|149907606|ref|ZP_01896353.1| clpB protein [Moritella sp. PE36]
gi|149809276|gb|EDM69205.1| clpB protein [Moritella sp. PE36]
Length = 857
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/712 (59%), Positives = 555/712 (77%), Gaps = 21/712 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q EE L KYT+DLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVNDQGAEEQREALAKYTLDLTERAEVGKLDPVIGRDDEIRRVIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK ++K
Sbjct: 205 IGEPGVGKTAIAEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKSVIK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAQTEGQTILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCMGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP++E+TI+ILRGL+ +YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPNVEDTIAILRGLKSRYELHHNVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +DKLERR+IQLKIE +A+++E D +S KRL I
Sbjct: 385 QLPDKAIDLIDEAASSIRLQMDSKPEALDKLERRIIQLKIERQALEKEDDSASIKRLSTI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + + K+ L++IW+ EK + ++ IK ++K R++++ A R SD +S+L+YG
Sbjct: 445 AEELAEKQDKFNELDEIWRTEKAALSGTKHIKSALDKARVELDMARRASDLNKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L +Q ++Q TLLK KVG EIA+I+SR TGIPV ++++ E+EK
Sbjct: 505 TIPMLEKQLDLAAQAEMQ------DMTLLKHKVGEAEIADILSRWTGIPVHRMLEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ EAIS VSNAIRRSR+GL+D RP GSF+F+GPTGVGKTE+CK L
Sbjct: 559 LLAMEDNLHQRVIGQAEAISVVSNAIRRSRAGLADPNRPMGSFLFMGPTGVGKTEVCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ IF++++++IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ADFIFDSDQAMIRLDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK-EMEKGDKEIIK 609
IEKA+ D+FNILLQ+LDDGRLTD +GRT+NFRNT+I+MTSNLGSD I+ E K D +K
Sbjct: 679 IEKAHPDIFNILLQVLDDGRLTDGQGRTVNFRNTVIIMTSNLGSDIIQEEYGKHDYNTVK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
L ++ + FRPEFINRIDD +VF L R +I IA IQL L+ +L ++ L I+
Sbjct: 739 LRLLELLGQSFRPEFINRIDDTVVFHPLGRSHIEKIAVIQLKSLEARLKQLGYSLSITAG 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPE---ANFIFLGDLI 718
AL K+++ GFD ++GAR LK++ +K E AN I GD++
Sbjct: 799 ALAKLADAGFDPLFGARP-----------LKRVLQKQVENRLANAILAGDVV 839
>gi|119470043|ref|ZP_01612848.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Alteromonadales bacterium
TW-7]
gi|392537038|ref|ZP_10284175.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas marina
mano4]
gi|119446753|gb|EAW28026.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Alteromonadales bacterium
TW-7]
Length = 858
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/677 (61%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKFRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRSEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I L+ +Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG
Sbjct: 445 QELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q TLLK +VG +EIAEI+SR TGIPVS+++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------DMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEDRLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYATLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ + FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS A
Sbjct: 739 SKVMDVLISEFRPEFINRIDETVVFHPLANQHIKEIADIQLMKLRERLTEMGYLLEISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 799 ALDTIAASGFDPVYGAR 815
>gi|332535268|ref|ZP_08411070.1| protein ClpB [Pseudoalteromonas haloplanktis ANT/505]
gi|332035299|gb|EGI71803.1| protein ClpB [Pseudoalteromonas haloplanktis ANT/505]
Length = 858
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/677 (61%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRTEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I L+ +Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG
Sbjct: 445 QELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + TLLK +VG +EIAEI+SR TGIPV++++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEDKLHSKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM + FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS A
Sbjct: 739 AKVMEVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL++I+ GFD +YGAR
Sbjct: 799 ALERIAASGFDPVYGAR 815
>gi|148978564|ref|ZP_01815016.1| ClpB protein [Vibrionales bacterium SWAT-3]
gi|145962353|gb|EDK27634.1| ClpB protein [Vibrionales bacterium SWAT-3]
Length = 857
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/677 (60%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDPNAEDRRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E++ E +A LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 QAELSDKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLKMEGVLHKRVIGQGEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFNTLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L +++I SIA+IQL LK ++ +L++S+
Sbjct: 739 NEVMEVVGKHFRPEFLNRVDESVVFHPLGQEHIQSIASIQLEHLKKRMEDNGYELEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK IS +GFD +YGAR
Sbjct: 799 ALKLISQVGFDPVYGAR 815
>gi|429334365|ref|ZP_19215031.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida CSV86]
gi|428760942|gb|EKX83190.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida CSV86]
Length = 854
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/676 (62%), Positives = 547/676 (80%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNAEESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAALKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI +LE +YA+LE++W EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 TEEIARLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLSRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + LL+ KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPDLERSLQMVDQ------HGKADNQLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+LL +RV+GQ+EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMESLLHERVIGQEEAVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+++ GD+E +
Sbjct: 679 VEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQDL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ V +FRPEFINRID+++VF L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAVGAHFRPEFINRIDEVVVFEPLGRDQIAGITQIQLGRLRSRLAERELSLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
L K+ +G+D +YGAR
Sbjct: 798 LDKLIAVGYDPVYGAR 813
>gi|221135104|ref|ZP_03561407.1| ATPase AAA-2 [Glaciecola sp. HTCC2999]
Length = 859
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/676 (60%), Positives = 541/676 (80%), Gaps = 7/676 (1%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
G+N+ E+ L+KYT DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLI
Sbjct: 146 GQNVNDPNAEDVREALEKYTSDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAI EGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E
Sbjct: 206 GEPGVGKTAIAEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKAVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
+S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEK
Sbjct: 266 LSKEEGNVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+L+++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 326 DAALERRFQKVLIDQPTVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYIADRQ 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I+++IDSKPE MDKL+RR+IQLK+E +A+ +E DE+S KRL +I+
Sbjct: 386 LPDKAIDLIDEAASSIRMQIDSKPEEMDKLDRRIIQLKLEEQALAKESDEASLKRLDIIQ 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
E E +Y LE IW EK ++ +Q IK ++E+ + ++ A R D +S+L+YG
Sbjct: 446 VERETAESRYKALETIWLTEKDAMQGAQGIKAQLEQAKQDMDIARRAGDLNRMSELQYGR 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ LE+ L+ + D P L+K KV EIA+++SR TGIPV+K+++ ER+KL
Sbjct: 506 IPALEQQLENANTADEVTPQ------LVKNKVTDVEIADVLSRWTGIPVAKMLEGERDKL 559
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
+ +E +L RV+GQDEA+ VSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCK+L+
Sbjct: 560 VRMETVLHDRVIGQDEAVKCVSNAIRRSRAGLADPAKPIGSFLFLGPTGVGKTELCKSLA 619
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F++++S++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+
Sbjct: 620 DFLFDSQDSMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEV 679
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKL 610
EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D + +K
Sbjct: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDVIQEQAHQQDYDAMKA 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
+VMN V ++FRPEFINR+DDI+VF L NI SIA IQL L+ +L +L IS AA
Sbjct: 740 SVMNTVAMHFRPEFINRVDDIVVFHPLALDNIKSIAKIQLQGLRQRLQDKGFELSISGAA 799
Query: 671 LKKISNIGFDLIYGAR 686
L KI+++GFD ++GAR
Sbjct: 800 LNKIADVGFDPVFGAR 815
>gi|398850111|ref|ZP_10606819.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM80]
gi|398986108|ref|ZP_10691379.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM24]
gi|399011818|ref|ZP_10714148.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM16]
gi|398117402|gb|EJM07154.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM16]
gi|398152896|gb|EJM41406.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM24]
gi|398249473|gb|EJN34859.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM80]
Length = 854
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/676 (61%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAMKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI +LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL KRV+GQ+EA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHKRVIGQEEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+ +L + + L++S A
Sbjct: 738 AVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRTRLAERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|418464566|ref|ZP_13035505.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756521|gb|EHK90678.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 856
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/676 (59%), Positives = 542/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+KYTIDLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNSEVPEGLKNKRVLSLDMGTLIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY QYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYHQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +YA LE++WK EK + +Q IK E+E R ++ +A R D +S+L+YG
Sbjct: 445 EKELAEKEREYAELEEVWKAEKAALSGTQHIKAELENARTQMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 505 KIPELEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHAQEGDDAVKS 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM V YFRPEFINRID+ ++F LN++NI IA+IQL L ++ L + A
Sbjct: 739 MVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMEIHGYVLNFTDAT 798
Query: 671 LKKISNIGFDLIYGAR 686
L IS+IG+D I+GAR
Sbjct: 799 LDFISDIGYDPIFGAR 814
>gi|399521946|ref|ZP_10762611.1| ATPase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109981|emb|CCH39171.1| ATPase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 854
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/688 (61%), Positives = 557/688 (80%), Gaps = 12/688 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAIANLRGGQAVNDPNVEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+++KRL ++ +I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 435 EATRKRLEKLEDDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQKIEQAKTELEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKF--TLLKTKVGSEEIAEIVSRTTGI 418
+++L+YG + LER L Q+ + K LL+ KV EEIAE+VS+ TGI
Sbjct: 495 LNRMAELQYGIIPDLERSL--------QMVDAHGKAENQLLRNKVTDEEIAEVVSKWTGI 546
Query: 419 PVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGP 478
PVSK+++ EREKLL +E+LL +RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGP
Sbjct: 547 PVSKMLEGEREKLLKMEDLLHQRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGP 606
Query: 479 TGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIV 538
TGVGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE V
Sbjct: 607 TGVGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 666
Query: 539 RRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK 598
RRKPYS++L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+
Sbjct: 667 RRKPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQ 726
Query: 599 EMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 658
E+ GDKE + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+++L
Sbjct: 727 EL-VGDKEAQRAAVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRSRLA 785
Query: 659 KMNMDLKISKAALKKISNIGFDLIYGAR 686
+ + L+++ AL K+ +G+D +YGAR
Sbjct: 786 ERELSLELTPEALDKLIAVGYDPVYGAR 813
>gi|359432252|ref|ZP_09222642.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20652]
gi|357921104|dbj|GAA58891.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20652]
Length = 858
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/677 (61%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRAEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I L+ +Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG
Sbjct: 445 QELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + TLLK +VG +EIAEI+SR TGIPV++++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEDKLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM + FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+IS A
Sbjct: 739 AKVMEVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL++I+ GFD +YGAR
Sbjct: 799 ALERIAESGFDPVYGAR 815
>gi|85711023|ref|ZP_01042083.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina baltica OS145]
gi|85694936|gb|EAQ32874.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina baltica OS145]
Length = 856
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/693 (59%), Positives = 550/693 (79%), Gaps = 13/693 (1%)
Query: 1 MGIKNNSLN------VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+GIK ++L +G+N+ EE L KYTIDLTE+A GKLDPVIGRD+EIR
Sbjct: 129 LGIKKDALEKAINDIRDGQNVDDPNAEEKRQALDKYTIDLTERAAQGKLDPVIGRDEEIR 188
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVLQRR+KNNPVLIG+PGVGKTAIVEGLAQRIIN EVP L +K++L LD+ LLAG
Sbjct: 189 RTIQVLQRRTKNNPVLIGDPGVGKTAIVEGLAQRIINAEVPEGLKNKRVLSLDLGALLAG 248
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +L E++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGEL
Sbjct: 249 AKYRGEFEERLKAVLNELAKEEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGEL 308
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
HC+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDP
Sbjct: 309 HCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHSVEITDP 368
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AIVAA+ LS+RYISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A
Sbjct: 369 AIVAAASLSHRYISDRKLPDKAIDLIDEAASSIRMQIDSKPEDLDRLERRIIQLKLERQA 428
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+++E D++SKKRL + E+++LE KY LE++W EK ++ +Q IK ++++VR +++
Sbjct: 429 LQKEKDDASKKRLEHLHDELDELEKKYGELEEVWNSEKAAVQGTQHIKSQLDQVRTEMDI 488
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R D +S+L+YG + +LER Q D+ L +LLK +V EEIA+++SR
Sbjct: 489 ARRAGDLNRMSELQYGRIPELER------QLDLALQAEMQDMSLLKNRVTDEEIADVLSR 542
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPVSK+++ EREKL+ +E+LL KRVVGQ+EA+ AV+NAIRRSR+GL D RP GSF+
Sbjct: 543 WTGIPVSKMLEGEREKLVQMESLLHKRVVGQNEAVDAVANAIRRSRAGLGDPNRPIGSFL 602
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYL
Sbjct: 603 FLGPTGVGKTELSKALANFMFDTDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS
Sbjct: 663 TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGS 722
Query: 595 DKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNIL 653
D I+ + + +K VM+ + +FRPEF+NR+D+ +VF L R+ I SIA QL L
Sbjct: 723 DLIQAHASDNSYDEMKAMVMDVLAGHFRPEFLNRVDETVVFHPLGREEIRSIAEAQLQRL 782
Query: 654 KNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+L +M +++S AL I++ GFD ++GAR
Sbjct: 783 YARLEDRDMSIELSVEALDFIASAGFDPVFGAR 815
>gi|422016627|ref|ZP_16363208.1| protein disaggregation chaperone [Providencia burhodogranariea DSM
19968]
gi|414092612|gb|EKT54287.1| protein disaggregation chaperone [Providencia burhodogranariea DSM
19968]
Length = 857
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/719 (58%), Positives = 560/719 (77%), Gaps = 17/719 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVNDQSAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ + E +Y++LE+ WK EK + +Q IK E+E R +I KA R D +S+L+YG
Sbjct: 445 EGELAEKEREYSSLEEEWKAEKASLTGTQHIKAELENARYEIEKARRSGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L+ ++ + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 505 RIPELEKQLEAATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLRMEQQLHRRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGVIGYSE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V FRPEFINRID+++VF L +++I++IANIQL L +L + ++ +
Sbjct: 738 KDMVMEVVAHSFRPEFINRIDEVVVFHPLGKEHIMNIANIQLARLYKRLEEHGYEVSATP 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
AAL+KI GFD I+GAR + K+++ + ++P A I G LI P +LD
Sbjct: 798 AALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPVTLDV 848
>gi|88800775|ref|ZP_01116332.1| ATPase with chaperone activity, ATP-binding subunit [Reinekea
blandensis MED297]
gi|88776481|gb|EAR07699.1| ATPase with chaperone activity, ATP-binding subunit [Reinekea sp.
MED297]
Length = 858
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/677 (61%), Positives = 531/677 (78%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
NG + S EE+ L KYT+DLT +A GKLDPVIGRDDEIRR +QVLQRR KNNPVL
Sbjct: 145 NGDPVTSADAEENRQALDKYTVDLTARAEAGKLDPVIGRDDEIRRTVQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP +L +K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPENLKNKRVLSLDLGALLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELAKQEGQIILFIDELHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+ V EP+ E++I+ILRGL+++YEVHHGV ITD AI+AA LS RYI+DR
Sbjct: 325 KDGALERRFQKVQVSEPNEEDSIAILRGLKERYEVHHGVTITDAAIIAAVRLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDE+A++I++EIDSKPE MD+LERRLIQLKIE EA+K+E D +K RL +
Sbjct: 385 QLPDKAIDLIDESASRIRMEIDSKPESMDRLERRLIQLKIEAEALKKESDPQAKSRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ I E +YA+LE+IW EK ++ SQ +KE++E+ R+ + A R D +S+L+YG
Sbjct: 445 QVSIKDAEREYASLEEIWNTEKAAVQGSQHVKEQLEQARVDLEAARRAGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++ LL KV E IA ++SR TGIPV K+++ ER+K
Sbjct: 505 RIPELEKQLDMASQAEMM------DMQLLHNKVTDESIANVISRWTGIPVDKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L R+VGQ EA+ AVSNAIRRSRSGLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEEVLHSRLVGQHEAVVAVSNAIRRSRSGLSDPNRPNGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AQFLFDTTEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+ + + + +K
Sbjct: 679 VEKAHTDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDQIQNLAGEAHYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V YFRPEFINR+D+++VF L + I IA IQL L +L + + L+I ++
Sbjct: 739 AAVMDVVGGYFRPEFINRLDEVVVFHPLGSEQIRGIARIQLQYLHERLSEQELGLEIRES 798
Query: 670 ALKKISNIGFDLIYGAR 686
+ K+ GFD +YGAR
Sbjct: 799 VMDKLCEAGFDPVYGAR 815
>gi|269140172|ref|YP_003296873.1| protein disaggregation chaperone [Edwardsiella tarda EIB202]
gi|267985833|gb|ACY85662.1| protein disaggregation chaperone [Edwardsiella tarda EIB202]
Length = 857
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/678 (60%), Positives = 543/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVDDQNAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E YA+LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG
Sbjct: 445 NTELEEKERDYASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KLPDLEKQLQAATQAE------GKSMKLLRNKVTDVEIAEVLARWTGIPVSRMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDELHRRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ GD +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQD-RFGDLSYGEM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM+ V +FRPEFINRID+ +VF L ++NI +IA IQL L +L + + +S
Sbjct: 738 KELVMSVVTHHFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKGYSISMSD 797
Query: 669 AALKKISNIGFDLIYGAR 686
AAL+++S GFD +YGAR
Sbjct: 798 AALEQLSQAGFDPVYGAR 815
>gi|387868692|ref|YP_005700161.1| chaperone ClpB [Edwardsiella tarda FL6-60]
gi|304560005|gb|ADM42669.1| ClpB [Edwardsiella tarda FL6-60]
Length = 809
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/680 (60%), Positives = 544/680 (80%), Gaps = 13/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 97 GGEKVDDQNAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 156
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 157 IGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERLKAVLN 216
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 217 DLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 276
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 277 KDAALERRFQKVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 336
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 337 QLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKKRLEIL 396
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E YA+LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG
Sbjct: 397 NTELEEKERDYASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMSEIQYG 456
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 457 KLPDLEKQLQAATQAE------GKSMKLLRNKVTDVEIAEVLARWTGIPVSRMLEGEREK 510
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 511 LLRMEDELHRRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 570
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 571 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 630
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EMEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ G+
Sbjct: 631 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGDLSYGE-- 688
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM+ V +FRPEFINRID+ +VF L ++NI +IA IQL L +L + + +
Sbjct: 689 -MKELVMSVVTHHFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKGYSISM 747
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL+++S GFD +YGAR
Sbjct: 748 SDAALEQLSQAGFDPVYGAR 767
>gi|404402810|ref|ZP_10994394.1| chaperone [Pseudomonas fuscovaginae UPB0736]
Length = 854
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/677 (62%), Positives = 550/677 (81%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN N+ EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDANV-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERLKALL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 NELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEDDEAAIKRLDK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++++I++LE +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+Y
Sbjct: 444 LQEDISRLEREYSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ERE
Sbjct: 504 GVIPDLERSLQMVDQ------HGHSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E+LL +RV+GQ EA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK
Sbjct: 558 KLLKMESLLHQRVIGQSEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ EE+++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLD
Sbjct: 618 LAEFLFDTEEAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSVQIQEL-AGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ + +FRPEFINR+D++++F L R I I IQL L+ +L + + L +S
Sbjct: 737 AAVMDALGSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLALSDE 796
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+ +G+D +YGAR
Sbjct: 797 ALDKLIAVGYDPVYGAR 813
>gi|385793710|ref|YP_005826686.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332679035|gb|AEE88164.1| ClpB protein [Francisella cf. novicida Fx1]
Length = 859
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/676 (59%), Positives = 549/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELAKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI LE +Y E++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EEEIKGLESEYKGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D + +K
Sbjct: 681 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYDTVKD 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|410084770|ref|ZP_11281491.1| ClpB protein [Morganella morganii SC01]
gi|409768415|gb|EKN52475.1| ClpB protein [Morganella morganii SC01]
Length = 812
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 100 GGENVNDQGAEDQRQALKKYTIDLTERAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 159
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRG+FE+RLK +L
Sbjct: 160 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGALLAGAKYRGDFEERLKAVLN 219
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 220 ELSKEEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 279
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 280 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDR 339
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+L+RR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 340 MLPDKAIDLIDEAGASLRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASKKRLDML 399
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +YA+LE+ WK EK + +Q IK E+E+ + + +A R D +S+L+YG
Sbjct: 400 EQELTEKEREYASLEEEWKAEKATLSGTQHIKAELEQAKTALEQARRTGDLTKMSELQYG 459
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 460 KIPELEKQLAAANAAE------DKEMKLLRNKVTDVEIAEILARWTGIPVSRMLEGEREK 513
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E ++ RV+GQDEA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 514 LLRMEQVMHSRVIGQDEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 573
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 574 ADFLFDSDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 633
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD+I+E + + + +K
Sbjct: 634 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDRIQEHFGELNYDAMK 693
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINRID+++VF L ++ I +IA IQL L +L + + I+ +
Sbjct: 694 GAVMEVVSHHFRPEFINRIDEVVVFHPLAKEQIHAIAKIQLKRLYKRLEEHGYQVTITDS 753
Query: 670 ALKKISNIGFDLIYGAR 686
AL K++ GFD ++GAR
Sbjct: 754 ALDKLAEAGFDPVFGAR 770
>gi|167627089|ref|YP_001677589.1| chaperone ClpB [Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|167597090|gb|ABZ87088.1| chaperone ClpB [Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 859
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/676 (59%), Positives = 547/676 (80%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSALK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI LE +Y E++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EAEIKGLESEYQGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D + +K
Sbjct: 681 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYDTVKD 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NRIDD IVF LN++ I IA IQ+ L+ +L +N+ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRIDDAIVFEPLNKEMITEIAKIQIKRLEKRLRDLNIGLEVTAKA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|149190363|ref|ZP_01868636.1| ClpB protein [Vibrio shilonii AK1]
gi|148835852|gb|EDL52816.1| ClpB protein [Vibrio shilonii AK1]
Length = 857
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/677 (60%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDPNAEEKRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+K E D +S+KRLL +
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALKNESDNASEKRLLAL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E YA LE++W EK + +Q IK E+E+ RL ++ A R D +S+L+YG
Sbjct: 445 NEELESKERDYAELEEVWNAEKAALSGTQHIKSELEQARLDMDVARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ KV EIAE++S+ TGIPVSK+++ E++K
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMSLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRV+GQ EA+ VS+AIRRSR+GL+D RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLKMEDVLHKRVIGQAEAVEVVSDAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + D E IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFQVLDYEGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +F+PEF+NR+D+ +VF L ++I SIA IQL L ++ L ++ A
Sbjct: 739 REVMDVVTSHFKPEFLNRVDESVVFHPLGAEHIKSIAGIQLQRLGKRMEDNGYHLVVADA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +G+D +YGAR
Sbjct: 799 ALDYIAKVGYDPVYGAR 815
>gi|343517922|ref|ZP_08754918.1| ATP-dependent chaperone protein ClpB [Haemophilus pittmaniae HK 85]
gi|343394773|gb|EGV07320.1| ATP-dependent chaperone protein ClpB [Haemophilus pittmaniae HK 85]
Length = 856
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/676 (60%), Positives = 542/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q EE L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGQSVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE++ E +YA LE++WK EK + SQ IK+ ++ + ++ +A R D +S+L+YG
Sbjct: 445 EKELSDKEREYAELEEVWKSEKAALSGSQHIKQALDAAKTEMEQARRAGDLSKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + +LL+ +V EEIAE++S+ TGIPV K+++ E+EK
Sbjct: 505 RIPELEKQLAAAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVFKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESYGEMKA 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L + NI +IA+IQL L ++ +L ++A
Sbjct: 739 LVMSVVSQHFRPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELVFTEAL 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D IYGAR
Sbjct: 799 LDFIGEVGYDPIYGAR 814
>gi|118498299|ref|YP_899349.1| chaperone clpB [Francisella novicida U112]
gi|194323883|ref|ZP_03057658.1| ATPase, AAA family protein [Francisella novicida FTE]
gi|118424205|gb|ABK90595.1| chaperone clpB [Francisella novicida U112]
gi|194321780|gb|EDX19263.1| ATPase, AAA family protein [Francisella tularensis subsp. novicida
FTE]
Length = 859
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/676 (59%), Positives = 551/676 (81%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E+ G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQEDMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI L+ +Y LE++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 EQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D + +K
Sbjct: 681 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYDTVKD 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +++ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|409202084|ref|ZP_11230287.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas
flavipulchra JG1]
Length = 857
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/661 (62%), Positives = 536/661 (81%), Gaps = 7/661 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIINGEVP L SK++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDE+
Sbjct: 221 QRIINGEVPEGLKSKRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGQVILFIDEI 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA +
Sbjct: 341 PTVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSHRYISDRQLPDKAIDLIDEAGSS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I+++IDSKPE +D+LERR+IQLK+E A+ +E DE+S+KR ++ IN+LE +Y L++
Sbjct: 401 IRLQIDSKPEQLDRLERRIIQLKLEDNALAKEKDEASQKRRTEMQTLINELEAEYRELDE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L SQ +
Sbjct: 461 VWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYGRIPELERKLDLASQAE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+Q + +LLK +VG +EIAEI+SR TGIPV+K++Q EREKLL +E+ L K+V+GQD
Sbjct: 521 MQ------EMSLLKNQVGEDEIAEILSRWTGIPVAKMLQGEREKLLQMEDELHKKVIGQD 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA++AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++++RIDM
Sbjct: 575 EAVNAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALANFMFDTEDAMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E D +K VM + FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDVIQEQAGNNDYATLKERVMAVLASQFRPEFI 754
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NRID+ +VF L ++I IA+IQL+ L +L + L++S AAL KI+ GFD +YGA
Sbjct: 755 NRIDETVVFHPLINEHIKEIASIQLDRLSKRLTEKGFALELSDAALDKIAASGFDPVYGA 814
Query: 686 R 686
R
Sbjct: 815 R 815
>gi|398980981|ref|ZP_10689213.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM25]
gi|398134012|gb|EJM23188.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM25]
Length = 854
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/676 (61%), Positives = 550/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDANHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI + E +Y++LE+IW EK ++ S QI+++IE+ R ++ A RK D +++L+YG
Sbjct: 445 QEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + ++ LL++KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 VIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E+LL +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LMKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSMQIQEL-VGDREAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ + +FRPEFINR+D++++F L R I I IQL L+++L + + L++S A
Sbjct: 738 AVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLELSPEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLIAVGYDPVYGAR 813
>gi|359439012|ref|ZP_09228992.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20311]
gi|359444692|ref|ZP_09234463.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20439]
gi|358026246|dbj|GAA65241.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20311]
gi|358041528|dbj|GAA70712.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20439]
Length = 858
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/677 (61%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLKIE A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPEALDKLERRIIQLKIEDNALAKEKDEASQKRRAEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ I +LE++Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG
Sbjct: 445 VELITELEVQYRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + +LLK +VG +EIAEI+SR TGIPV++++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVARMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEEQLHNKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGYMFDTESAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+N++I+MTSNLGSD I+E D + +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNSVIIMTSNLGSDIIQEQAGNNDYDELK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM + FRPEFINRID+ +VF L +I IA+IQL+ L+ +L +M L+++ A
Sbjct: 739 NKVMGVLHNEFRPEFINRIDETVVFHPLAHSHIKEIADIQLSKLRERLTEMGYLLELTDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL++I+ GFD +YGAR
Sbjct: 799 ALERIAASGFDPVYGAR 815
>gi|330446996|ref|ZP_08310647.1| ATP-dependent chaperone ClpB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491187|dbj|GAA05144.1| ATP-dependent chaperone ClpB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 858
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/677 (61%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE+ L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDPNAEENRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEDGRVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E D++S KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKEDDDASHKRLSDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +YA LE++W EK + +Q IK E+E+ R + A R D +S+L+YG
Sbjct: 445 LEELDLKEREYAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLLK KV EIA+++S+ TGIPVSK+++ ER+K
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQDEA+ AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEDELHHRVIGQDEAVEAVANAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFMFDSEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGNLDYDGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINR+D+ +VF L ++NI +IA+IQ+ LK +L + + L I +
Sbjct: 739 ALVMEVVGQHFRPEFINRVDETVVFHPLGKENIKNIASIQIERLKKRLAEKDYRLDIDDS 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 799 ALDLIAEAGFDPVYGAR 815
>gi|90580379|ref|ZP_01236186.1| putative clpB, ATPase with chaperone activity [Photobacterium
angustum S14]
gi|90438681|gb|EAS63865.1| putative clpB, ATPase with chaperone activity [Vibrio angustum S14]
Length = 858
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/677 (61%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE+ L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDPNAEENRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEDGRVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E D +S K L +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKEDDAASNKHLSDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +YA LE++W EK + +Q IK E+E+ R + A R D +S+L+YG
Sbjct: 445 LEELDLKEREYAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLLK KV EIA+++S+ TGIPVSK+++ ER+K
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQDEA+ AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEDELHHRVIGQDEAVVAVANAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFMFDSEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E D E IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGNLDYEGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINR+D+ +VF L ++NI +IA+IQL LK +L + + L + +
Sbjct: 739 ALVMEVVGQHFRPEFINRVDETVVFHPLGKENIKNIASIQLERLKKRLAEKDFRLDVGDS 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 799 ALDMIAEAGFDPVYGAR 815
>gi|414072182|ref|ZP_11408133.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. Bsw20308]
gi|410805399|gb|EKS11414.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. Bsw20308]
Length = 858
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/677 (61%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRAEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I L+ +Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG
Sbjct: 445 QELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + TLLK +VG +EIAEI+SR TGIPVS+++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEDKLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ + FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+I+
Sbjct: 739 AKVMDVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEITDT 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL++I+ GFD +YGAR
Sbjct: 799 ALERIAASGFDPVYGAR 815
>gi|329895231|ref|ZP_08270895.1| ClpB protein [gamma proteobacterium IMCC3088]
gi|328922469|gb|EGG29811.1| ClpB protein [gamma proteobacterium IMCC3088]
Length = 856
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/677 (61%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNQPEAEESRQALEKYTIDLTERAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG K+RG+FE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRLLSLDLGALLAGAKFRGDFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFVDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP ++TI+ILRGL+++YEVHH V+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVNEPSEQDTIAILRGLKERYEVHHSVQITDSAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MDKLERRLIQLKIE EA+KR+ D +KK+L +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPESMDKLERRLIQLKIEREAVKRDTDAGAKKQLEQL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
K+I+++ +Y++LE+IWK EK ++ + QIK +IE+ +L++ A R D +S+L+YG
Sbjct: 445 NKDIDQVGREYSDLEEIWKAEKAALQGAAQIKSDIEQAKLELESARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE++L + Q + + LL+ V EE+AE+VSR TGIPV+K+++ +R+K
Sbjct: 505 KLPELEKLLTQAEQSE------QTERQLLRNNVTDEEVAEVVSRWTGIPVAKMLEGDRDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQDEA+ AVS+A+RR+R+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEDALHDRVVGQDEAVRAVSDAVRRARAGLSDPNRPNGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRR+PYSL+LLDE
Sbjct: 619 ANFLFDSEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRRPYSLLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I+EM + +K
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDVIQEMAGEENYAAMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPEFINR+D+ +VF L + I IA IQL+ L+ +L ++ L++S A
Sbjct: 739 QAVMAIVGNHFRPEFINRVDESVVFHPLAQAQIRGIAEIQLSGLRARLQAQDIQLEVSVA 798
Query: 670 ALKKISNIGFDLIYGAR 686
L ++ GFD +YGAR
Sbjct: 799 LLDHLATAGFDPVYGAR 815
>gi|359453754|ref|ZP_09243059.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20495]
gi|358049188|dbj|GAA79308.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Pseudoalteromonas sp. BSi20495]
Length = 858
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/677 (61%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEETRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+RYISDR
Sbjct: 325 KDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQKRRAEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I L+ +Y L++IW EK ++ +Q IK E+E+ RL ++ A R SD Q +S+L+YG
Sbjct: 445 QELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + TLLK +VG +EIAEI+SR TGIPVS+++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEEKLHGKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNNDYTTLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ + FRPEFINRID+ +VF L ++I IA+IQL L+ +L +M L+I+
Sbjct: 739 AKVMDVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLLEITDT 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL++I+ GFD +YGAR
Sbjct: 799 ALERIAASGFDPVYGAR 815
>gi|24375079|ref|NP_719122.1| stress-induced multi-chaperone system component ClpB [Shewanella
oneidensis MR-1]
gi|54035853|sp|Q8EBE6.1|CLPB_SHEON RecName: Full=Chaperone protein ClpB
gi|24349835|gb|AAN56566.1| stress-induced multi-chaperone system component ClpB [Shewanella
oneidensis MR-1]
Length = 857
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/713 (58%), Positives = 558/713 (78%), Gaps = 15/713 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELAQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++RL +
Sbjct: 385 KLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLDHL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ +E K + L +IW+ EK + +Q IK ++E+ RL + A R D +S+L+YG
Sbjct: 445 QEELRDVEAKASELSEIWRTEKAALAGTQHIKADLEQARLDLEVARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREK
Sbjct: 505 RIPELEKQLDLASQAEMQ------DMTLLRNKVTDLEIAEVLSKATGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ARFLFDSESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQEGFGHLSYSEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVMN V FRPEF+NRID+ +VF L+ +NI IA+IQ+ L+ +L + + L+I+
Sbjct: 739 SAVMNVVTHSFRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKDYTLEITDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 722
AL I+ IGFD +YGAR + K++L + ++P A + GDL+ P
Sbjct: 799 ALSLIAEIGFDPVYGARPL---KRAL-----QQEMENPLAQKLLRGDLLPGKP 843
>gi|410641943|ref|ZP_11352461.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
chathamensis S18K6]
gi|410138260|dbj|GAC10648.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
chathamensis S18K6]
Length = 858
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 559/702 (79%), Gaps = 13/702 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVEE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KRL LI+ E + E K++ LE
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKRLELIEIEREQAEFKFSELEA 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK ++ +Q I+ E+++ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSELQYGRIPELESKLEIATESE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
Q + LLK++V EIA+++SR TGIPVSK+++ E++KL+N+E+ L +RVVGQ
Sbjct: 521 SQ----PIEHQLLKSRVTESEIADVLSRWTGIPVSKMLEGEKDKLMNMESALHERVVGQS 576
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLANFLFDTEDAMVRIDM 636
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D E +K +V++ + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDYEKMKQSVLDVLSTHFRPEFL 756
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+ +VF L I SIA+ QL +L+ +L + L+++ AAL+K++ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLAQITSIASKQLQLLRRRLEDKGIGLELTDAALEKLAEAGFDPVYGA 816
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
R + K+++ + + ++P A I G L+ S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLMTDSVVSIDA 850
>gi|94498969|ref|ZP_01305507.1| ATPase with chaperone activity, ATP-binding subunit [Bermanella
marisrubri]
gi|94428601|gb|EAT13573.1| ATPase with chaperone activity, ATP-binding subunit [Oceanobacter
sp. RED65]
Length = 870
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/687 (60%), Positives = 554/687 (80%), Gaps = 17/687 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ E++ L K+T+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 143 QGESVDDPNAEDNRQALDKFTVDLTARAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAI+EGLAQRI++GEVP L +K+IL LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 203 IGAPGVGKTAIIEGLAQRIVDGEVPEGLRNKRILSLDMGSLLAGAKFRGDFEERLKNVLK 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I++FIDE+HTM+G GK +G++DAGNMLKP LSRGELHC+GATTL+EYR+YIE
Sbjct: 263 EVSKQEGNIVLFIDEIHTMVGAGKTDGALDAGNMLKPALSRGELHCVGATTLDEYREYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 323 KDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVQITDGAIIAAAKLSTRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ MD+LERRLIQLKIE EA+ +E DE SKKRL I
Sbjct: 383 QLPDKAIDLIDEAASIIRMEIDSKPQEMDRLERRLIQLKIEREALNKESDEGSKKRLNEI 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
EINKL +Y LE +WK EK ++ S+Q KE +E+ ++++ +A R D Q +S+L+YG
Sbjct: 443 NGEINKLGREYVELEDVWKQEKLSLEGSKQAKEALEEAKVEMEQARRAGDLQRMSELQYG 502
Query: 371 ELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
++ +LE+ ++ EK++K +N+F LL+ +V EEIAE+VS+ TG+PV+K+++ ER
Sbjct: 503 KIPELEKQIEAAEKAEK------GSNEFKLLRNRVTDEEIAEVVSKWTGVPVAKMLEGER 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
EKLL +E L K VVGQD+AI+AVSNA+RRSR+GLSD ++P GSF+FLGPTGVGKTELCK
Sbjct: 557 EKLLRMEQELHKHVVGQDDAITAVSNAVRRSRAGLSDPRKPNGSFLFLGPTGVGKTELCK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 617 ALATFMFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEHVRRKPYSVILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-------E 601
DE+EKA+ DVFNILLQ+LDDG+LTD +GRT++F+NT++VMTSNLGSD I+ M E
Sbjct: 677 DEVEKAHPDVFNILLQVLDDGQLTDGQGRTVDFKNTVLVMTSNLGSDVIQTMSHHNQGEE 736
Query: 602 KGDKEI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 659
+ D E +K AVM V +FRPEFINRID+++VF L + I IA IQL L+ +L +
Sbjct: 737 QTDTEYEEMKSAVMEIVGGHFRPEFINRIDEVVVFHPLQKSQIQGIAQIQLQELEKRLKE 796
Query: 660 MNMDLKISKAALKKISNIGFDLIYGAR 686
+ L++S A+ ++ +G+D +YGAR
Sbjct: 797 RELSLQLSDEAINRLVEVGYDPVYGAR 823
>gi|381402590|ref|ZP_09927274.1| protein disaggregation chaperone [Pantoea sp. Sc1]
gi|380735789|gb|EIB96852.1| protein disaggregation chaperone [Pantoea sp. Sc1]
Length = 857
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/678 (60%), Positives = 544/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG
Sbjct: 445 ESELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPALEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEQELHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + G E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGDLGYPE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+++VF L K+I SIA IQL L ++L + L+IS+
Sbjct: 738 KEIVMGVVGQHFRPEFINRIDEVVVFHPLAEKHIASIAQIQLQRLYHRLEERGYQLQISE 797
Query: 669 AALKKISNIGFDLIYGAR 686
AL+ ++ G+D +YGAR
Sbjct: 798 EALRLLAENGYDPVYGAR 815
>gi|407070078|ref|ZP_11100916.1| chaperone ClpB protein [Vibrio cyclitrophicus ZF14]
Length = 857
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDPNAEDRRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLIAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E++ E +A LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 QSELSDKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFNTLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L + +I SIA+IQL LK ++ + +L++S
Sbjct: 739 NEVMEVVSKHFRPEFLNRVDESVVFHPLGQDHIQSIASIQLEHLKKRMEENGYELEVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK IS +GFD +YGAR
Sbjct: 799 ALKLISQVGFDPVYGAR 815
>gi|387887315|ref|YP_006317614.1| chaperone ClpB [Francisella noatunensis subsp. orientalis str. Toba
04]
gi|386872131|gb|AFJ44138.1| chaperone ClpB [Francisella noatunensis subsp. orientalis str. Toba
04]
Length = 859
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/676 (59%), Positives = 546/676 (80%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + SQ E G L KYT+DLT+ AR GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSSQNQENMKGALDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELSKQEGNIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI LE +Y E++WK EK ++ + ++KEE+EK + ++ K R D +++L+YG
Sbjct: 445 ETEIKGLESEYQGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE +K+ + + N L++T V EIA++VS+ TGIPVSK+++ E++K
Sbjct: 505 KIPELEAQIKQIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS+++LIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDEDAMLRVDMSEFMEKHSVAKLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+ D +K
Sbjct: 681 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDYNTVKD 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L +N+ L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLKDLNIGLEVTAKA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 MDKLADAGFDPVFGAR 816
>gi|333901990|ref|YP_004475863.1| ATP-dependent chaperone ClpB [Pseudomonas fulva 12-X]
gi|333117255|gb|AEF23769.1| ATP-dependent chaperone ClpB [Pseudomonas fulva 12-X]
Length = 854
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/677 (61%), Positives = 550/677 (81%), Gaps = 12/677 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
VN NI EE L KYT+DLT++A GKLDPVIGRDDEIRR IQVLQRR+KNNPV
Sbjct: 149 VNDPNI-----EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAI EGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIAEGLAQRIVNGEVPDGLKDKRLLSLDMGALIAGAKFRGEFEERLKAVL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQ+I
Sbjct: 264 NELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPSLARGELHCVGATTLNEYRQFI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RYI+D
Sbjct: 324 EKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KKR +
Sbjct: 384 RQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVEAQALKKEEDEAAKKRFVK 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
++ +I KLE +YA+LE IWK EK ++ S QI++ IE+ + ++ A RK D +++L+Y
Sbjct: 444 LQDDIAKLEKEYADLEDIWKSEKAEVQGSAQIQQRIEQAKTELEAARRKGDLNRMAELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + LER L+ Q + + LL++KV EEIAE+VS+ TGIPVSK+++ ER+
Sbjct: 504 GVIPDLERSLQMVDQ------HGTTENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERD 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E LL +RV+GQDEA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK
Sbjct: 558 KLLKMEGLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+D
Sbjct: 618 LAEFLFDTEDALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIK 609
E+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD+E +
Sbjct: 678 EVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDREAQR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEF+NRID+++VF L R+ I IA IQL+ L +L + + L++S
Sbjct: 737 AAVMDAVGNHFRPEFVNRIDEVVVFEPLAREQIAGIARIQLSRLLQRLAERELSLELSDE 796
Query: 670 ALKKISNIGFDLIYGAR 686
A+ K+ +G+D +YGAR
Sbjct: 797 AMDKLIAVGYDPVYGAR 813
>gi|332307414|ref|YP_004435265.1| ATP-dependent chaperone ClpB [Glaciecola sp. 4H-3-7+YE-5]
gi|332174743|gb|AEE23997.1| ATP-dependent chaperone ClpB [Glaciecola sp. 4H-3-7+YE-5]
Length = 858
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 559/702 (79%), Gaps = 13/702 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVEE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KRL LI+ E + E K++ LE
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKRLELIEIEREQAEFKFSELEA 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK ++ +Q I+ E+++ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSELQYGRIPELESKLEIATESE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
Q + LLK++V EIA+++SR TGIPVSK+++ E++KL+N+E+ L +RVVGQ
Sbjct: 521 SQ----PIEHQLLKSRVTESEIADVLSRWTGIPVSKMLEGEKDKLMNMESALHERVVGQS 576
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLANFLFDTEDAMVRIDM 636
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D E +K +V++ + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDYEKMKQSVLDVLSTHFRPEFL 756
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+ +VF L I SIA+ QL +L+ +L + L+++ AAL+K++ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLAQITSIASKQLQLLRKRLEDKGIGLELTDAALEKLAEAGFDPVYGA 816
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
R + K+++ + + ++P A I G L+ S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLMTDSVVSIDA 850
>gi|372267908|ref|ZP_09503956.1| ATP-dependent chaperone ClpB [Alteromonas sp. S89]
Length = 868
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/679 (62%), Positives = 551/679 (81%), Gaps = 16/679 (2%)
Query: 19 QDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGK 78
Q EE L K+T+D+T +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGK
Sbjct: 153 QAEEARQALDKFTLDMTARAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGK 212
Query: 79 TAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKD 138
TAIVEGLAQRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK +L E+S +
Sbjct: 213 TAIVEGLAQRIVNGEVPEGLKDKRLLSLDLGALLAGAKFRGEFEERLKAVLNELSKQEGR 272
Query: 139 IIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERR 198
II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERR
Sbjct: 273 IILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332
Query: 199 FQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAID 258
FQK+LV+EP E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAID
Sbjct: 333 FQKVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAATKLSQRYITDRQLPDKAID 392
Query: 259 LIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREY-DESSKKRLLLIKKEINKL 317
LIDEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K++ DE++KKRL ++++I+++
Sbjct: 393 LIDEAASRIRMEIDSKPEEMDKLERRLIQLKIEREAVKKDKDDEAAKKRLEKLEEDIDQI 452
Query: 318 EIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLER 377
E +YA+LE+IWK EK + S IK ++E+ +L ++ A R D +S+++YG + +LE
Sbjct: 453 EKEYADLEEIWKAEKAKLAGSADIKNKLEQAKLDMDAARRAGDLTRMSEIQYGVIPQLEE 512
Query: 378 ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENL 437
LK S ++ ++ LL+ +V EE+AE+VSR TGIPVSK+++ EREKLL +E++
Sbjct: 513 QLKHASDS-----SDTSENQLLRNRVTDEEVAEVVSRWTGIPVSKMLEGEREKLLRMEDV 567
Query: 438 LCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNN 497
L RV+GQDEA+ AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+
Sbjct: 568 LHNRVIGQDEAVEAVSNAVRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALAQFLFDT 627
Query: 498 EESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSD 557
E++++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ D
Sbjct: 628 EDAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPD 687
Query: 558 VFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG------DKEI---- 607
VFNILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I++ G D EI
Sbjct: 688 VFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKYASGRDDDEIDSEIQYRQ 747
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
+K AVM+ V +FRPEFINRID+++VF L R+ + +IA IQL L+ +LL ++ L+IS
Sbjct: 748 MKAAVMDVVGEHFRPEFINRIDEVVVFHPLGREEVRAIAEIQLQNLRKRLLDRDLKLEIS 807
Query: 668 KAALKKISNIGFDLIYGAR 686
L K++++GFD +YGAR
Sbjct: 808 DELLGKLADVGFDPVYGAR 826
>gi|119775735|ref|YP_928475.1| clpB protein [Shewanella amazonensis SB2B]
gi|119768235|gb|ABM00806.1| clpB protein [Shewanella amazonensis SB2B]
Length = 857
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/716 (57%), Positives = 559/716 (78%), Gaps = 15/716 (2%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
G+ + E++ LKKYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLI
Sbjct: 146 GQKVDDPNAEDNRQALKKYTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E
Sbjct: 206 GEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQY+EK
Sbjct: 266 LAQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY+SDR
Sbjct: 326 DAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRYVSDRK 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR IQLK+E +A+ +E DE+S+KRL ++
Sbjct: 386 LPDKAIDLIDEAASSIRMQIDSKPESLDRLERRAIQLKLEEQALAKENDEASRKRLEHLR 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
E+ ++E K L +IW+ EK + +Q IK ++E+ R+ + A R SD +S+L+YG
Sbjct: 446 HELKEVEAKANELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRASDLTRMSELQYGR 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ +LE+ L +Q ++Q LL+ KV EIAE++S+ TGIPV+K+++ EREKL
Sbjct: 506 IPELEKQLDLAAQAEMQ------DMKLLRNKVTDVEIAEVLSKATGIPVAKMLEGEREKL 559
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L +E+ L +RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L+
Sbjct: 560 LQMEHALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLA 619
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+
Sbjct: 620 KFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEV 679
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKL 610
EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQERFGTLDYAQMKQ 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VMN V FRPEF+NRID+ +VF L+ ++I +IA+IQ+ L+ +L + +L++S A
Sbjct: 740 EVMNVVVHSFRPEFLNRIDETVVFHPLDAEHIKNIASIQIESLRKRLAEREFELELSDEA 799
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I+ GFD +YGAR + K++L + ++P A + G+ I P +D
Sbjct: 800 LAFIARAGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGEFIPGKPIRVD 847
>gi|261250366|ref|ZP_05942942.1| ClpB protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954665|ref|ZP_12597697.1| hypothetical protein VIOR3934_12715 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260939482|gb|EEX95468.1| ClpB protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342814941|gb|EGU49872.1| hypothetical protein VIOR3934_12715 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 857
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/717 (57%), Positives = 557/717 (77%), Gaps = 17/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKIDDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVIVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLTIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+N E +A LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NDELNDKERAFAELEEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHKRVIGQTEAVEVVANAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I SIA+IQL L ++ + L +S+
Sbjct: 739 EQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLLRLSKRMEEKGYSLDVSEK 798
Query: 670 ALKKISNIGFDLIYGARDV-HGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 725
AL I+ +GFD +YGAR + ++S+ ++P A I G +I P L
Sbjct: 799 ALDLIAQVGFDPVYGARPLKRAIQQSV---------ENPLAKAILAGKVIPDKPVKL 846
>gi|78484759|ref|YP_390684.1| ATPase AAA [Thiomicrospira crunogena XCL-2]
gi|78363045|gb|ABB41010.1| ATPase family associated with various cellular activities
[Thiomicrospira crunogena XCL-2]
Length = 854
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/677 (62%), Positives = 553/677 (81%), Gaps = 4/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q EE+ L KYT+DLTE+AR GKLDPVIGRDDEIRRA+QVLQRR+KNNPVL
Sbjct: 140 GGESVQDQNAEENRQALDKYTLDLTERARSGKLDPVIGRDDEIRRAVQVLQRRTKNNPVL 199
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+A LLAG KYRGEFE+RLK +LK
Sbjct: 200 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRLLSLDLAGLLAGAKYRGEFEERLKALLK 259
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++ + +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+ IE
Sbjct: 260 DLEKQEGSVILFIDEIHTMVGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEYRENIE 319
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP E+TI+ILRGL+++YEVHHGV ITDPAI+AA+ LS RYI+DR
Sbjct: 320 KDAALERRFQKVIVDEPSEEDTIAILRGLKERYEVHHGVAITDPAIIAAAHLSQRYITDR 379
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+SKKRL ++
Sbjct: 380 QLPDKAIDLIDEAASRIRMEIDSKPEEMDRLDRRLIQLKIEREALKKEKDEASKKRLGVL 439
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I+++E +YA+LE+IWK +K ++ ++Q KEE++K R+++ A R+ + +S+L+YG
Sbjct: 440 QESIDEMEKEYADLEEIWKKDKAALQGAKQYKEELDKARIEMEAAHREGNLGKMSELQYG 499
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE +K + + + + LL+ KV EEIAE+V+R TGIP+S++++ ER+K
Sbjct: 500 VIPDLEAKIKAAEEAEGEED---GQMHLLRNKVTEEEIAEVVARWTGIPISRMLEGERDK 556
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + +V+GQ EA+SAVS+AIRRSR+GLSD RP GSF+FLGPTGVGKTEL K L
Sbjct: 557 LLRMEEAIGAKVIGQSEAVSAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELTKAL 616
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 617 ADFLFDTQDAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILLDE 676
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I+E + E +K
Sbjct: 677 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQEKTGQATYEEMK 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRIDDI+VF L++ I SIA+IQLN L+ +L + L++S A
Sbjct: 737 RDVMDVVGSHFRPEFINRIDDIVVFHPLDKAQIRSIADIQLNHLRQRLADNELSLELSDA 796
Query: 670 ALKKISNIGFDLIYGAR 686
L KI+ GFD +YGAR
Sbjct: 797 VLDKIAEAGFDPVYGAR 813
>gi|260775122|ref|ZP_05884020.1| ClpB protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260608823|gb|EEX34985.1| ClpB protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 857
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDQNAEDLRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRNKRVLSLDMGTLVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLSNL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +A LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NEELEDKERAFAELEEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHARVIGQSEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFGSLDYQGMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L +++I SIA+IQL L ++ + L++S
Sbjct: 739 EQVMEVVNKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLQRLSKRMEERGYALEVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|410647346|ref|ZP_11357781.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
agarilytica NO2]
gi|410133201|dbj|GAC06180.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
agarilytica NO2]
Length = 858
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 559/702 (79%), Gaps = 13/702 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVEE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KRL LI+ E + E K++ LE
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKRLELIEIEREQAEFKFSELEA 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK ++ +Q I+ E+++ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSELQYGRIPELESKLEIATESE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
Q + LLK++V EIA+++SR TGIPVSK+++ E++KL+N+E+ L +RVVGQ
Sbjct: 521 SQ----PLEHQLLKSRVTESEIADVLSRWTGIPVSKMLEGEKDKLMNMESALHERVVGQS 576
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLANFLFDTEDAMVRIDM 636
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D E +K +V++ + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDYEKMKQSVLDVLSTHFRPEFL 756
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+ +VF L I SIA+ QL +L+ +L + L+++ AAL+K++ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLAQITSIASKQLQLLRKRLEDKGIGLELTDAALEKLAEAGFDPVYGA 816
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
R + K+++ + + ++P A I G L+ S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLMTDSVVSIDA 850
>gi|409397138|ref|ZP_11248076.1| ClpB protein [Pseudomonas sp. Chol1]
gi|409118298|gb|EKM94698.1| ClpB protein [Pseudomonas sp. Chol1]
Length = 854
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/686 (60%), Positives = 557/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAIANLRGGEAVNDPNAEESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+++KRL ++ +I KLE +YA+LE+IWK EK ++ S Q++++IE+ + + A RK D
Sbjct: 435 EATRKRLAKLEDDIAKLEKEYADLEEIWKSEKAEVQGSAQLQQKIEQAKADLEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++L+YG + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LARMAELQYGIIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E++L +RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGEREKLLRMEDMLHQRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+
Sbjct: 669 KPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSMQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD + + AVM+ V +FRPEFINRID+++VF L R+ I IA+IQL L+ +L +
Sbjct: 729 -VGDPDAQRAAVMDAVGHHFRPEFINRIDEVVVFDPLAREQIAGIADIQLARLRKRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L++++ A+ K+ +G+D +YGAR
Sbjct: 788 ELSLELTQEAMDKLIAVGYDPVYGAR 813
>gi|410620447|ref|ZP_11331318.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
polaris LMG 21857]
gi|410159932|dbj|GAC35456.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
polaris LMG 21857]
Length = 858
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 560/702 (79%), Gaps = 13/702 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+K+T DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIG PGVGKTAI EGLA
Sbjct: 161 LEKFTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTAIAEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIIN EVP L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINSEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVEE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE MD+LERR+IQLK+E +A+ +E D++S KRL LI+ E + E K++ LE
Sbjct: 401 IRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDDASHKRLELIEIEREQAEFKFSELET 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK ++ +Q I+ E+E+ +L + A R SD +S+L+YG + +LE L+ ++ +
Sbjct: 461 IWKAEKQAMQGTQNIRAELEQAKLDLEIARRASDLSRMSELQYGRIPELESKLEIATESE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
Q + + LLK++V EIA+++SR TGIPVSK+++ E++KL+++E+ L +RVVGQ
Sbjct: 521 SQ----SVEHQLLKSRVTENEIADVLSRWTGIPVSKMLEGEKDKLMSMESALHERVVGQS 576
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA++AVSNAIRRSR+GL+D +P GSF+FLGPTGVGKTELCKTL+ +F+ E++++RIDM
Sbjct: 577 EAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELCKTLAHFLFDTEDAMVRIDM 636
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 637 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 696
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D E +K +V++ + +FRPEF+
Sbjct: 697 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDYEKMKQSVLDVLSTHFRPEFL 756
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+ +VF L + I SIA+ QL L+ +L + + L+++ AAL+K++ GFD +YGA
Sbjct: 757 NRVDETVVFHPLGLEQITSIASKQLQFLRKRLEEKGIGLELTDAALQKLAEAGFDPVYGA 816
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
R + K+++ + + ++P A I G LI S+D
Sbjct: 817 RPL---KRAIQMEI-----ENPLAQKILSGKLIADSVVSIDA 850
>gi|260771761|ref|ZP_05880679.1| ClpB protein [Vibrio metschnikovii CIP 69.14]
gi|260613053|gb|EEX38254.1| ClpB protein [Vibrio metschnikovii CIP 69.14]
Length = 838
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/718 (58%), Positives = 556/718 (77%), Gaps = 15/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A KLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 126 GGQKVNDPNAEELRQALEKFTIDLTERAEQSKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 185
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 186 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 245
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 246 ELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 305
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 306 KDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYISDR 365
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+I++DSKPE++DKLER++IQLKIE +A+ E+D++S+KRL +I
Sbjct: 366 QLPDKAIDLIDEAASSIRIQMDSKPEVLDKLERKIIQLKIEQQALSNEHDDASEKRLGII 425
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+IW EK + +Q IK +E+ RL + A R D +S+L+YG
Sbjct: 426 NDELKEKEREYSELEEIWNTEKAALSGTQHIKSALEQARLDLEVARRAGDLNRMSELQYG 485
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EEIAE++S+ TGIPV+K+++ E+EK
Sbjct: 486 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDEEIAEVLSKQTGIPVAKMLEAEKEK 539
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ EA+ V++AIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 540 LLQMETFLHQRVIGQSEAVEVVADAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 599
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 600 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 659
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K
Sbjct: 660 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAHLDYQTMK 719
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NRID+ +VF L ++ I SIA IQL L+ +L + L +S
Sbjct: 720 EQVMEVVSKHFRPEFLNRIDESVVFHPLAQEQIKSIAFIQLERLRQRLADKDYGLIVSDD 779
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
AL +++IGFD +YGAR + K+++ + ++P A I G I P LD
Sbjct: 780 ALDLVAHIGFDPVYGARPL---KRAIQQTI-----ENPLAKSILSGQFIPGTPIYLDV 829
>gi|392545971|ref|ZP_10293108.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas rubra ATCC
29570]
Length = 857
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/661 (62%), Positives = 533/661 (80%), Gaps = 7/661 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+KYTIDLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E+ + +I+FIDE+
Sbjct: 221 QRIINGEVPEGLKDKRVLSLDLGALVAGAKYRGEFEERLKSVLNELGKEEGRVILFIDEI 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYISDR +PDKAIDLIDEA +
Sbjct: 341 PSVEDTIAILRGLKERYELHHSVDITDPAIVAAAQLSHRYISDRQLPDKAIDLIDEAGSS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR ++ I +LE +Y L++
Sbjct: 401 IRLQIDSKPEQLDKLERRIIQLKLEDNALAKEKDEASQKRRSEMQTLIQQLETEYRELDE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L SQ +
Sbjct: 461 VWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYGRIPELERKLDLASQAE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+Q + +LLK +VG +EIAEI+SR TGIPV+K++Q ER+KLL +E+ L K+V+GQD
Sbjct: 521 MQ------EMSLLKNQVGEDEIAEILSRWTGIPVAKMLQGERDKLLQMEDELHKKVIGQD 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+SAV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E++++RIDM
Sbjct: 575 EAVSAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGFMFDTEDAMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E D +K VM+ + FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDVIQEQAGSNDYATLKKRVMDVLVTQFRPEFI 754
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NRID+ +VF L ++I IA+IQL L+ +L +++ AAL KI+ GFD +YGA
Sbjct: 755 NRIDETVVFHPLINEHIKQIADIQLAKLRQRLHDKGFGFELTDAALDKIAASGFDPVYGA 814
Query: 686 R 686
R
Sbjct: 815 R 815
>gi|253689510|ref|YP_003018700.1| ATP-dependent chaperone ClpB [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756088|gb|ACT14164.1| ATP-dependent chaperone ClpB [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 857
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/718 (57%), Positives = 563/718 (78%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEQVNDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+
Sbjct: 385 QLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+++ E +Y+ E+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG
Sbjct: 445 SAELDQKEREYSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q++ LL+ +V EIA++++R TGIPVS++++ E+EK
Sbjct: 505 KIPELEKQLAAATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPVSRMLESEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEM 737
Query: 611 --AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
V+ V FRPEFINRID+++VF L R +I SIA IQL L +L + + I+
Sbjct: 738 RDMVLEVVSHNFRPEFINRIDEVVVFHPLGRAHITSIAKIQLQRLYKRLEERGYSVTITD 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AAL + +GFD +YGAR + K+++ L+ ++P A I G LI P +LD
Sbjct: 798 AALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPITLD 847
>gi|91794212|ref|YP_563863.1| ATPase AAA-2 [Shewanella denitrificans OS217]
gi|91716214|gb|ABE56140.1| ATPase AAA-2 [Shewanella denitrificans OS217]
Length = 862
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRRSKNNPVL
Sbjct: 145 GGQKMDDPNAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG+PGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGDPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RYISDR
Sbjct: 325 KDAALERRFQKVLVNEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE++D+LERR IQLK+E +A+ +E D++S+KRL +
Sbjct: 385 KLPDKAIDLIDEAASSIRMQIDSKPEVLDRLERRAIQLKLEEQALSKETDDASRKRLEHL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ + K + L +IW EK + +Q IK ++E+ R+ ++ A R D +S+L+YG
Sbjct: 445 QLELKDVSAKASELNEIWHTEKAALAGTQHIKADLEQARMDLDVARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q TLL+ KV EIAE++S+ TGIPVSK+++ EREK
Sbjct: 505 RIPELEKQLDLASQAEMQ------DMTLLRNKVTDIEIAEVLSKATGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLQMESALHERVIGQSEAVEAVSNAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AKFLFDTEAALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTESVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEGFGTLSYQEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVMN V FRPEF+NR+D+ +VF L++++I IA IQ+ L+ +L + + +L ++ A
Sbjct: 739 AAVMNVVTHSFRPEFLNRVDESVVFHPLDKEDIKHIAGIQIGSLRKRLQEKDYELLVTDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 799 ALSLIAAAGFDPVYGAR 815
>gi|254281898|ref|ZP_04956866.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR51-B]
gi|219678101|gb|EED34450.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR51-B]
Length = 860
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/678 (61%), Positives = 545/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + + + EE L+KYTIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGAGVDNPEAEESRQALEKYTIDLTARAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI+EGLAQR+INGEVP L K+IL LD+ LLAG K+RG+FE+RLK +L
Sbjct: 205 IGEPGVGKTAIIEGLAQRVINGEVPEGLKDKRILSLDLGALLAGAKFRGDFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQY+E
Sbjct: 265 ELSKEEGRVILFVDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V+ITD AI+AA+ LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHSVDITDSAIIAAARLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K++ +++KK+L L+
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPESMDRLERRLIQLKIEREAVKKDVTDAAKKQLELL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++I ++ +Y++LE++WK EK ++ + Q+K +IE ++ + A R D +S+++YG
Sbjct: 445 DEQIELVQREYSDLEEVWKSEKAQVQGAAQVKADIESAKVDLEAARRAGDLTRMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L+ D P TLLK++V EE+AE+VSR TGIPVSK+++ +REK
Sbjct: 505 VMPELEKRLQLADSSDAPEP------TLLKSRVTEEEVAEVVSRWTGIPVSKMLEGDREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMELSLHERVVGQDEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE
Sbjct: 619 AEYLFDSEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+EM GD+ E I
Sbjct: 679 VEKAHLDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEM-AGDENYEAI 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V +FRPEFINR+D+ +VF L + I IA IQL+ L+ +L ++ L +S
Sbjct: 738 KAAVMGVVGTHFRPEFINRVDETVVFHPLKAEEIRGIAVIQLDSLRQRLADRDLGLDLSP 797
Query: 669 AALKKISNIGFDLIYGAR 686
L +++ GFD +YGAR
Sbjct: 798 EVLDHLASAGFDPVYGAR 815
>gi|294142195|ref|YP_003558173.1| clpB protein [Shewanella violacea DSS12]
gi|293328664|dbj|BAJ03395.1| clpB protein [Shewanella violacea DSS12]
Length = 857
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/716 (59%), Positives = 554/716 (77%), Gaps = 15/716 (2%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
GK I E+ LKK+T+DLTE A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLI
Sbjct: 146 GKTIDDPNAEDQRQALKKFTVDLTELAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E
Sbjct: 206 GEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
+ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYR+YIEK
Sbjct: 266 LYQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYRKYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+LVEEP++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S RY+SDR
Sbjct: 326 DAALERRFQKVLVEEPNVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSNRYVSDRK 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I+I+IDSKPE++DKLERR IQLKIE +A+ +E DE+S +RL ++
Sbjct: 386 LPDKAIDLIDEAASSIRIQIDSKPEVLDKLERRSIQLKIEEQALAKETDEASIRRLYSLR 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
KE+ ++ K A L +IW EK + +Q IK ++E+ RL ++ A R SD +S+L+YG
Sbjct: 446 KELKDVDAKAAELNEIWHTEKAALAGTQHIKADLEQARLNLDVARRASDLTRMSELQYGR 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ LE+ L +Q ++Q TLL+ KV EIAE++SR TGIPV+K+++ E+EKL
Sbjct: 506 IPALEKQLDLAAQAEMQ------DMTLLRHKVTDVEIAEVLSRATGIPVAKMLEGEKEKL 559
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
LN+E L + V+GQ+EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L+
Sbjct: 560 LNMEEALHQTVIGQNEAVDAVSNAIRRSRAGLADPERPIGSFLFLGPTGVGKTELCKSLA 619
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE+
Sbjct: 620 KFLFDTEAAMVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEV 679
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKL 610
EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+ +K
Sbjct: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQTRCGSLSYSEMKA 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VMN V FRPEF+NRID+ +VF L+ K+I IANIQ+ L+ +L + + +L IS+ A
Sbjct: 740 EVMNVVVHSFRPEFLNRIDETVVFHPLDEKHIEYIANIQIQALQQRLTEKDFELIISEDA 799
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I+ GFD +YGAR + K++L + +P A I G L+ P L+
Sbjct: 800 LALIAKAGFDPVYGARPL---KRAL-----QQEVANPLAQRILSGSLVPGKPIKLE 847
>gi|374334801|ref|YP_005091488.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
gi|372984488|gb|AEY00738.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
Length = 857
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/677 (60%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE+ L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDPNAEENRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 ELAKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDQPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE S+KRL LI
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPEPLDRLDRRIIQLKLEEQALLKEDDEGSRKRLQLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ + E +YA LE++WK EK + +Q IK E+E+VR ++ A R SD +S+L+YG
Sbjct: 445 RDELAEKEKEYAELEEVWKSEKAALAGTQHIKAELEQVRQELEVARRASDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + LLK +V EEIA+++SR TGIPV+K+++ E+EK
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EQHLLKNRVTDEEIADVLSRWTGIPVAKMLEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L ++V+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+F+GPTGVGKTELCK L
Sbjct: 559 LLRMEDSLHEQVIGQNEAVDAVANAIRRSRAGLSDPNRPVGSFLFMGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ADFLFDSRDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSN+GSD I+E D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNIGSDLIQEHSASKDYDQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M + FRPEFINRID+I+VF L + I +IA IQL L +L M+ + IS A
Sbjct: 739 AMLMEVLGHQFRPEFINRIDEIVVFHPLAQDQIKAIARIQLQGLVERLESMDYQVSISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
L+K++ GFD ++GAR
Sbjct: 799 LLEKLATAGFDPLFGAR 815
>gi|333367821|ref|ZP_08460054.1| chaperone protein ClpB [Psychrobacter sp. 1501(2011)]
gi|332978323|gb|EGK15049.1| chaperone protein ClpB [Psychrobacter sp. 1501(2011)]
Length = 862
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/675 (58%), Positives = 546/675 (80%), Gaps = 1/675 (0%)
Query: 13 KNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIG 72
+ + SQ E+ L KYTI+LTE+A +GKLDPVIGRD+EIRR IQVL RR+KNNPVLIG
Sbjct: 144 QTVDSQNAEDQRDALNKYTINLTERAEMGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIG 203
Query: 73 EPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEI 132
EPGVGKTAIVEGLAQ+I+NG+VP L K++L LD+ L+AG KYRGEFE+RLK +L ++
Sbjct: 204 EPGVGKTAIVEGLAQKIVNGDVPEGLRRKEVLSLDLGALIAGAKYRGEFEERLKNVLNDL 263
Query: 133 SNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKD 192
+ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD
Sbjct: 264 AKQEGNVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 323
Query: 193 AAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFM 252
AA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+DR +
Sbjct: 324 AALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDRKL 383
Query: 253 PDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKK 312
PDKAIDL+DEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D ++ ++ +
Sbjct: 384 PDKAIDLVDEAASRLRMEMDSKPEALGKLDSRLIQLKMQREVLKNEEDAGAQAERKVLDE 443
Query: 313 EINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGEL 372
+I +LE +YA+L +IW+ EK L+K SQQ+K+E++K R+ +KA+R+ D++T+SKL+Y +
Sbjct: 444 QIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMSKLQYETI 503
Query: 373 NKLE-RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+LE RI + + + ++ LL+ KV EIAE+V+ TGIPV++++Q EREK+
Sbjct: 504 PQLEKRITESDLAEQKEQAGEGDRIKLLRNKVTDNEIAEVVAAATGIPVNRMLQGEREKM 563
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L +E L +RVVGQDEA+ +V+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K+L+
Sbjct: 564 LAMEERLHERVVGQDEAVQSVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKSLA 623
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+
Sbjct: 624 NFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEV 683
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLA 611
EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM D E IK A
Sbjct: 684 EKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMAGDDYEEIKSA 743
Query: 612 VMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAAL 671
VM V +FRPEF+NRID+I+VF L + IA+IQLN L+++L + MD+K+S A+
Sbjct: 744 VMESVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIADIQLNRLRDRLKEREMDIKLSPDAM 803
Query: 672 KKISNIGFDLIYGAR 686
+ +G+D +YGAR
Sbjct: 804 HMLVAVGYDPVYGAR 818
>gi|429093582|ref|ZP_19156164.1| ClpB protein [Cronobacter dublinensis 1210]
gi|426741478|emb|CCJ82277.1| ClpB protein [Cronobacter dublinensis 1210]
Length = 861
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 538/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQAAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLERRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+N E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NDELNDKERQYSTLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 509 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +++I SIA IQL L +L ++IS
Sbjct: 743 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAVRISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 803 ALQLLGENGYDPVYGAR 819
>gi|198283746|ref|YP_002220067.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665588|ref|YP_002426377.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248267|gb|ACH83860.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517801|gb|ACK78387.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 866
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 550/677 (81%), Gaps = 2/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L+KYTID TE+A GKLDPVIGRDDEIRR IQVL RRSKNNPVL
Sbjct: 145 GGEKINDANAEEQRQALEKYTIDYTERASQGKLDPVIGRDDEIRRTIQVLLRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLA R+INGEVP SL K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLALRLINGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++ ++ II+FIDE+HT++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLEKSEGKIILFIDEIHTLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQ++LV+EP +E+ I+ILRGL+++YE HHGV ITDPA+VAA +LS+RYI+DR
Sbjct: 325 KDAALERRFQRVLVDEPSVEDAIAILRGLKERYEAHHGVRITDPALVAAVQLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++IK+EIDSKP+ +D+LERR+IQL IE A+++E DE+S+KRL ++
Sbjct: 385 NLPDKAIDLMDEAASRIKMEIDSKPQELDELERRIIQLNIERVALEKEKDEASRKRLDIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I + + KY LE++WK EK I+ + QI++E+++ R++++ A R +D + +++L+Y
Sbjct: 445 QAQIKESDRKYQELEEVWKGEKLAIEGTSQIQKELDRKRVELDTARRANDLERMAELQYS 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE L ++ Q + K TLL+T+VG EEIAE+V+R TGIPVSK+++ E+EK
Sbjct: 505 SIPALEAQL-HAAEIHAQSAGSGAKPTLLRTEVGEEEIAEVVARWTGIPVSKMLEGEKEK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQ EA++AVSNAIRRSR+GLSD KRP GSF+FLGPTGVGKTEL K L
Sbjct: 564 LLKMEERLQARVVGQSEAVAAVSNAIRRSRAGLSDPKRPNGSFLFLGPTGVGKTELTKAL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 624 AEFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ +VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E KG+ + ++
Sbjct: 684 VEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEFSRKGEYDSMR 743
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+AV++ V+ +FRPEF+NRID++++FR L + I IQ+ L+++L + +MDL +S
Sbjct: 744 VAVLDVVQDHFRPEFLNRIDELVIFRPLTAVQLREITGIQMGFLRSRLRERDMDLVLSDG 803
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ +G+D +YGAR
Sbjct: 804 ALDHLAEVGYDPVYGAR 820
>gi|422022041|ref|ZP_16368550.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
gi|414097791|gb|EKT59444.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
Length = 857
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/717 (58%), Positives = 560/717 (78%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQSAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ + E +YA+LE+ WK EK + +Q IK E+E R ++ KA R D +S+L+YG
Sbjct: 445 EDELAEKEREYASLEEEWKAEKASLTGTQHIKTELEHARYEMEKARRGGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L+ ++ + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 505 RIPELEKQLESATKAE------GKNMKLLRNKVTDSEIAEILARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEHQLHKRVIGQNEAVVAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++++++IRIDMSEF+EKH+++RL+GAPPGY+GYEEGGYLTE VRR+PYS+IL DE
Sbjct: 619 ANFMFDSDDAMIRIDMSEFMEKHAVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILFDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E + +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQESFGRISYPEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM + FRPEFINRID+++VF L++ NI +IANIQL+ L +L + ++ + A
Sbjct: 739 DMVMEVLTRSFRPEFINRIDEVVVFHPLDKANIANIANIQLSRLYKRLEEHGYEVSATPA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+KI G+D I+GAR + K+++ + ++P A I G LI P LD
Sbjct: 799 ALEKIGEAGYDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPVVLD 847
>gi|33151758|ref|NP_873111.1| ATP-dependent Clp protease subunit B [Haemophilus ducreyi 35000HP]
gi|54035812|sp|Q7VNH1.1|CLPB_HAEDU RecName: Full=Chaperone protein ClpB
gi|33147979|gb|AAP95500.1| ATP-dependant Clp protease chain B [Haemophilus ducreyi 35000HP]
Length = 856
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/720 (57%), Positives = 565/720 (78%), Gaps = 20/720 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ +Q E+ L+KYTIDLTE+A+ GKLDPVIGRD+EIRR +QVLQRR+KNNPVL
Sbjct: 143 GGESVNNQNAEQTRQALQKYTIDLTERAKTGKLDPVIGRDEEIRRTVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEKDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ +Y+ LE++WK EK+ + +Q +K E+E R+ +++A R +++ +S+L+YG
Sbjct: 443 DEEMTAKAQEYSALEEVWKAEKSALLGTQHLKTELENARIAMDQAKRADNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L Q I+ N LL+TKV EEIAE++S+ TGIP++K+++ E+EK
Sbjct: 503 TIPALEKQL----QDAIKREEENNDHHLLRTKVTEEEIAEVLSKATGIPITKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAI RSR+GL+D +P GSF+FLGPTGVGKTEL KTL
Sbjct: 559 LLRMEQVLHSRVIGQNEAVEAVANAILRSRAGLADPNKPIGSFLFLGPTGVGKTELSKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +I+RIDMSEF+EKHS+SRL+GAPPGY+GYE+GGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDENAIVRIDMSEFMEKHSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLG+ I+E + EI L
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGAHLIQE----NAEITYL 734
Query: 611 A----VMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
A VM+ V +FRPEFINRID+ +VF L++++I +IANIQL L +L + + I
Sbjct: 735 AMKEMVMSVVSQHFRPEFINRIDETVVFHPLDQQHIRAIANIQLQRLIRRLAERGYQVTI 794
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
S AL IS GFD ++GAR + K+++ L ++P A I G L+ P +D
Sbjct: 795 SDTALDHISQAGFDSLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNNPVIID 846
>gi|392541242|ref|ZP_10288379.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas piscicida
JCM 20779]
Length = 857
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/661 (62%), Positives = 534/661 (80%), Gaps = 7/661 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIINGEVP L SK++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDE+
Sbjct: 221 QRIINGEVPEGLKSKRVLSLDVGALVAGVKYRGEFEERLKSVLNELAKEEGQVILFIDEI 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
TM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V E
Sbjct: 281 RTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEA +
Sbjct: 341 PTVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSHRYISDRQLPDKAIDLIDEAGSS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I+++IDSKPE +D+LERR+IQLK+E A+ +E DE+S+KR ++ IN+LE +Y L++
Sbjct: 401 IRLQIDSKPEQLDRLERRIIQLKLEDNALAKEKDEASQKRRTEMQTLINELEAEYRELDE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LER L SQ +
Sbjct: 461 VWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMSELQYGRIPELERKLDLASQAE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+Q + +LLK +VG +EIAEI+SR TGIPV+K++Q EREKLL +E+ L K+V+GQD
Sbjct: 521 MQ------EMSLLKNQVGEDEIAEILSRWTGIPVAKMLQGEREKLLQMEDELHKKVIGQD 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA++AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L+ +F+ E +++RIDM
Sbjct: 575 EAVNAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALANFMFDTEGAMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E D +K VM + FRPEFI
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDVIQEQAGNNDYATLKERVMGVLASQFRPEFI 754
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NRID+ +VF L ++I IA+IQL+ L +L + L++S AAL KI+ GFD +YGA
Sbjct: 755 NRIDETVVFHPLINEHIKEIASIQLDRLSKRLTEKGFALELSDAALDKIAASGFDPVYGA 814
Query: 686 R 686
R
Sbjct: 815 R 815
>gi|331006072|ref|ZP_08329408.1| ClpB protein [gamma proteobacterium IMCC1989]
gi|330420109|gb|EGG94439.1| ClpB protein [gamma proteobacterium IMCC1989]
Length = 887
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/706 (59%), Positives = 549/706 (77%), Gaps = 36/706 (5%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + EE+ L+KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVDNPDAEENRQALEKYTVDLTSQAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI+EGLAQRI+NGEVP+ L K++L LD+ LLAG K+RGEFE+RLK ++
Sbjct: 205 IGEPGVGKTAIIEGLAQRIVNGEVPDGLKDKRVLSLDLGSLLAGAKFRGEFEERLKAVIN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + IIIFIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IE
Sbjct: 265 ELSKQEGRIIIFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LVEEP +TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDTALERRFQKVLVEEPSETDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE +D+LERRLIQLKIE EA+K++ D++S+ RL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEALDRLERRLIQLKIEREAVKKDDDDASRLRLASM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
K I LE +Y +LE+IW EK + + +IK +E+ R+ ++ A R SD + +S+L+YG
Sbjct: 445 DKSIVVLEKEYIDLEEIWNTEKVALHGTVEIKATLEQARVDMDAARRASDLERISQLQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ D+ + TLL+ KV EEIA++VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPELEKQLNAASQADVI------EMTLLRNKVTEEEIADVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L +RV+GQ++AI AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLSMETELHRRVIGQEQAIVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++R+DMSEF+EKH+++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 AEFLFDSPDAMVRLDMSEFMEKHAVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-------- 602
IEKA+ DVFNILLQ+LDDGRLTD++GRT++FRNT+IVMTSNLGSD I+E+ +
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDSQGRTVDFRNTVIVMTSNLGSDAIQEIGQNRSFDNVS 738
Query: 603 -------GDK---------------EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRK 640
G+ + +K AVM V +FRPEFINRID+ +VF L +
Sbjct: 739 FDLPDLAGESTGSDGATDSANQHKYDAMKAAVMEVVVKHFRPEFINRIDEAVVFHPLAKD 798
Query: 641 NILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
I IA+IQL LKN+L +D+ ++ L K+S+ GFD +YGAR
Sbjct: 799 QIRGIADIQLAGLKNRLADREIDITLTDQVLDKLSDAGFDPVYGAR 844
>gi|157962981|ref|YP_001503015.1| ATPase [Shewanella pealeana ATCC 700345]
gi|157847981|gb|ABV88480.1| ATPase AAA-2 domain protein [Shewanella pealeana ATCC 700345]
Length = 857
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/678 (60%), Positives = 537/678 (79%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
NG+N+ E+ LKK+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPVL
Sbjct: 145 NGQNVDDPNAEDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP + +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELSQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR IQLK+E +A+ +E DE+S +RL +
Sbjct: 385 KLPDKAIDLIDEAASSIRIQIDSKPESLDRLERRAIQLKLEEQALSKEADEASLRRLDTL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ +E K A L +IW EK + +Q IK ++E+ R+ + A R D +S+L+YG
Sbjct: 445 RAELKDVEAKGAELNEIWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q TLL+ KV EIAE++S+ TGIPVSK+++ ER+K
Sbjct: 505 RIPELEKQLDLAAQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ +VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLKMEDALHERVIGQNEAVDSVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E +++R+DMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AKFLFDTESALVRVDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I ++ G + +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-QLGFGTQSYDEM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V FRPEF+NR+D+ +VF L+ KNI IA IQ+ LK +L + L++S
Sbjct: 738 KSDVMQVVMQNFRPEFLNRVDEAVVFHPLDEKNIAHIAKIQIEGLKKRLADKDYGLEMSD 797
Query: 669 AALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 798 DALALIARAGFDPVYGAR 815
>gi|333907083|ref|YP_004480669.1| ATP-dependent chaperone ClpB [Marinomonas posidonica IVIA-Po-181]
gi|333477089|gb|AEF53750.1| ATP-dependent chaperone ClpB [Marinomonas posidonica IVIA-Po-181]
Length = 859
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/677 (61%), Positives = 544/677 (80%), Gaps = 6/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ EE L KYT+DLT +A G+LDPVIGRDDEIRR IQVLQRR KNNPVL
Sbjct: 145 GGDSVNDPDAEESRQALDKYTVDLTARAAEGRLDPVIGRDDEIRRTIQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKKKRVLSLDMGALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+GTGK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKQEGQVILFIDEIHTMVGTGKSEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP + ++I+ILRGL+++YEVHHGV+ITD AI+A+++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSVLDSIAILRGLKERYEVHHGVDITDSAIIASAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D++SK RL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEMDSKPEDMDRLERRLIQLKIEKEALKKEKDKASKLRLDEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
EI++L+ ++++L++IW EK + +Q++KEE+E VR ++ +A R + +S+L+YG
Sbjct: 445 GSEIDRLQKEFSDLDEIWNAEKAAVHGAQKLKEELESVRHEMEEARRNGNLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE +++ Q++ + LLK V EEIA +VSR TGIPV K+++ ER+K
Sbjct: 505 VIPMLEAEIEKAGQEE-----ENTETRLLKRHVSEEEIATVVSRWTGIPVDKMLEGERDK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L + V+GQ+EA+SAVSNA+RRSRSGL+D +P GSF+FLGPTGVGKTELCK+L
Sbjct: 560 LLRMEEALHESVMGQNEAVSAVSNAVRRSRSGLADPNKPNGSFLFLGPTGVGKTELCKSL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 620 AKFLFDTEQAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E + D+ + IK
Sbjct: 680 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEYQSDDQYDEIK 739
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRID+ +VF L R I IA IQL L N+L +M M L +S A
Sbjct: 740 AKVMSVVGTHFRPEFINRIDETVVFHPLMRSQIKGIAAIQLAHLNNRLEEMGMSLIMSDA 799
Query: 670 ALKKISNIGFDLIYGAR 686
A ++++ +G+D +YGAR
Sbjct: 800 AQERLAEVGYDPVYGAR 816
>gi|269101906|ref|ZP_06154603.1| ClpB protein [Photobacterium damselae subsp. damselae CIP 102761]
gi|268161804|gb|EEZ40300.1| ClpB protein [Photobacterium damselae subsp. damselae CIP 102761]
Length = 857
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/677 (60%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE+ L+KYT+DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDDANAEENRQALEKYTVDLTARAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLA RI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLALRIVNGEVPEGLRNKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 ELSQEDGSVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKESDEASQKRLSDL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +YA LE++W EK + +Q IK E+E+ R + A R D +S+L+YG
Sbjct: 445 LEELDLKEREYAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLLK KV EIA+++S+ TGIPV+K+++ ER+K
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVAKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEEELHRRVIGQNEAVEAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E D E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGSLDYEGLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINR+D+ +VF L + NI IANIQL L+ +L + + L + ++
Sbjct: 739 ALVMDVVGQHFRPEFINRVDETVVFHPLGQDNIKHIANIQLARLQKRLAEKDYRLDVDES 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 799 ALDLIAEAGFDPVYGAR 815
>gi|334706239|ref|ZP_08522105.1| ATP-dependent chaperone protein ClpB [Aeromonas caviae Ae398]
Length = 857
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
GK + EE+ L+KYTIDLTE+A LGKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGKKVEDANAEENRQALEKYTIDLTERAELGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 DLAKEEGSVILFVDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL L+
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLDLL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E +Y LE++WK EK + +Q IK +E+ R + A R D +S+L+YG
Sbjct: 445 NQELTEKEREYNELEEVWKAEKAALAGTQHIKAALEQARQDLEVARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ +V EIA++++R TGIPV+++++ EREK
Sbjct: 505 RIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M + FRPEFINRID+ +VF L ++I SIA IQL L N+L ++++S+
Sbjct: 739 AMLMEVLTRSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMNRLESQGFEVEVSEE 798
Query: 670 ALKKISNIGFDLIYGAR 686
L K+ + GFD +YGAR
Sbjct: 799 LLTKLVHAGFDPVYGAR 815
>gi|343498451|ref|ZP_08736487.1| hypothetical protein VITU9109_14823 [Vibrio tubiashii ATCC 19109]
gi|418477074|ref|ZP_13046210.1| hypothetical protein VT1337_01810 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342824423|gb|EGU58968.1| hypothetical protein VITU9109_14823 [Vibrio tubiashii ATCC 19109]
gi|384575269|gb|EIF05720.1| hypothetical protein VT1337_01810 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 857
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/717 (57%), Positives = 557/717 (77%), Gaps = 17/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKINDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVIVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDDASEKRLTIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +A LE++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NDELAEKERAFAELEEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L KRV+GQ EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHKRVIGQTEAVEVVANAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFGSLDYQGMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L + +I SIA+IQL L ++ + L +S
Sbjct: 739 EQVMDVVGKHFRPEFLNRVDESVVFHPLGQDHIKSIASIQLERLSKRMEEKGYSLDVSDK 798
Query: 670 ALKKISNIGFDLIYGARDV-HGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 725
AL I+ +GFD +YGAR + ++S+ ++P A I G +I P L
Sbjct: 799 ALDLIAQVGFDPVYGARPLKRAIQQSV---------ENPLAKAILAGKVIPDKPVKL 846
>gi|419953969|ref|ZP_14470111.1| ClpB protein [Pseudomonas stutzeri TS44]
gi|387969344|gb|EIK53627.1| ClpB protein [Pseudomonas stutzeri TS44]
Length = 854
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/686 (60%), Positives = 555/686 (80%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G ++ + EE L KYT+D+T +A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAIANLRGGEAVNDPNAEESRQALDKYTVDMTRRAEDGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEA ++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAGSRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+++KRL ++ +I KLE +YA+LE+IWK EK ++ S Q++++IE+ + ++ A RK D
Sbjct: 435 EATRKRLAKLEDDIAKLEKEYADLEEIWKSEKAEVQGSAQLQQKIEQAKAELEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++L+YG + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LARMAELQYGIIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ EREKLL +E++L +RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTG
Sbjct: 549 SKMLEGEREKLLRMEDMLHQRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+
Sbjct: 669 KPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSMQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD + + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L +
Sbjct: 729 -VGDPDAQRAAVMDAVGHHFRPEFINRIDEVVVFDPLAREQIAGIAEIQLARLRKRLAER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L++++ A+ K+ +G+D +YGAR
Sbjct: 788 ELSLELTQEAMDKLIAVGYDPVYGAR 813
>gi|254482819|ref|ZP_05096056.1| ATP-dependent chaperone ClpB [marine gamma proteobacterium
HTCC2148]
gi|214036900|gb|EEB77570.1| ATP-dependent chaperone ClpB [marine gamma proteobacterium
HTCC2148]
Length = 854
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/677 (61%), Positives = 555/677 (81%), Gaps = 9/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + + + EE L+KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 143 GGDTVDNPEAEESRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI+EGLAQR+INGEVP L K+IL LD+ LLAG K+RGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIIEGLAQRVINGEVPEGLKDKRILSLDLGSLLAGAKFRGEFEERLKSVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 263 ELSKEEGRVILFIDEMHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRQYVE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP+ E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 323 KDAALERRFQKVLVEEPNEEDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K+ DE++K+++ +
Sbjct: 383 QLPDKAIDLVDEAASRIRMEIDSKPEAMDKLERRLIQLKIEREAVKK--DETAKEQVKHL 440
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++I +E ++++LE++WK EK ++ S Q+K ++E+V+L++ A R D +S+L+YG
Sbjct: 441 DEQIEVVEREFSDLEEVWKAEKASLQGSAQVKSDLEQVKLEMESARRAGDLTKMSELQYG 500
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L+E Q+ + TLL+ KV EE+AE+VSR TGIP+SK+++ +REK
Sbjct: 501 KLPELEKQLEEA-----QVAETV-EHTLLRNKVTEEEVAEVVSRWTGIPISKMLEGDREK 554
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 555 LLRMEDELHSRVVGQDEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 614
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE
Sbjct: 615 AEFLFDSEQAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDE 674
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGS I+EM D E +K
Sbjct: 675 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSHLIQEMASEDNYEKMK 734
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINR+D+ +VF L + I IA+IQL L+++L + ++L+IS+A
Sbjct: 735 SAVMDVVGTHFRPEFINRVDESVVFHPLLQSQIRGIADIQLRGLESRLAERELNLEISEA 794
Query: 670 ALKKISNIGFDLIYGAR 686
++ ++ GFD +YGAR
Sbjct: 795 FMEHLTVAGFDPVYGAR 811
>gi|218708596|ref|YP_002416217.1| chaperone ClpB protein [Vibrio splendidus LGP32]
gi|218321615|emb|CAV17567.1| Chaperone clpB protein [Vibrio splendidus LGP32]
Length = 857
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDPNAEDRRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG+PGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGQPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+++ E +A LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 QSELSEKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLKMEGVLHKRVIGQGEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFNTLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L +++I SIA IQL LK ++ +L++S+
Sbjct: 739 NEVMEVVGKHFRPEFLNRVDESVVFHPLGQEHIESIAAIQLEHLKMRMEDNGYELEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK IS +GFD +YGAR
Sbjct: 799 ALKLISQVGFDPVYGAR 815
>gi|365539747|ref|ZP_09364922.1| ClpV protein [Vibrio ordalii ATCC 33509]
Length = 858
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G G+ EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGNVILFIDELHTMVGAGRGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLQVL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E ++A LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 NEELKVKEREFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDVEIAEVLSKQTGIPVSKMLEEEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ EA+ VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLQMEDALHQRVIGQVEAVEVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D E IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSQIQEKFASLDYEGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L ++ I SIA+IQL L ++ + L++S+
Sbjct: 739 KEVMEIVGKHFRPEFLNRVDESVVFHPLAQEQIKSIASIQLARLGKRMEEKGYQLEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ IS +GFD +YGAR
Sbjct: 799 ALELISQVGFDPVYGAR 815
>gi|392552078|ref|ZP_10299215.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas spongiae
UST010723-006]
Length = 858
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E+ L+K+T+DLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDSPNAEDTRQALEKFTVDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGQVILFIDEIHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHTVEITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +D+LER++IQLK+E A+ +E D++SK R I
Sbjct: 385 QLPDKAIDLIDEAGSHIRMQIDSKPEELDRLERKIIQLKLEDNALAKETDDASKSRQADI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I +L+ +Y L+++W EK ++ +Q IK E+E+ RL + A R D Q +S+L+YG
Sbjct: 445 QAQIKQLDSQYNELDEVWNAEKASLQGTQVIKTELEQARLDLEVARRAGDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q +LL KVG EIAEI+SR TGIPV+K++Q ER+K
Sbjct: 505 RIPELERKLDLASQAEMQ------DMSLLVNKVGENEIAEILSRWTGIPVAKMLQGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L ++VVGQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLSMEAKLHEKVVGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 ANFMFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRTI+F+NT+I+MTSNLGSD I+E D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTIDFKNTVIIMTSNLGSDVIQEQASNNDYQGLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M+ + +FRPEFINRID+ +VF L + +I +IA IQL L+ +L L+++ A
Sbjct: 739 NTLMSVIGQHFRPEFINRIDETVVFHPLAQAHIENIAKIQLQRLEQRLQDNGYQLELTDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL KI+ GFD ++GAR
Sbjct: 799 ALAKIAEAGFDPVFGAR 815
>gi|418293836|ref|ZP_12905738.1| ClpB protein [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379065221|gb|EHY77964.1| ClpB protein [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 854
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/686 (60%), Positives = 556/686 (81%), Gaps = 8/686 (1%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
++N N+ G + ++ + EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVL
Sbjct: 135 ALENAISNLRGGDAVNDPNAEESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQKI V+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKIQVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
+LS+RYI+DR +PDKAIDLIDEA ++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E D
Sbjct: 375 KLSHRYITDRQLPDKAIDLIDEAGSRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E++KKRL ++ +I KLE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D
Sbjct: 435 EATKKRLAKLEDDIAKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+++L+YG + LER L+ Q + + LL+ KV EEIAE+VS+ TGIPV
Sbjct: 495 LARMAELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
SK+++ ER+KLL +E++L RV+GQ EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTG
Sbjct: 549 SKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCK L+ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
KPYS++L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+
Sbjct: 669 KPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQIQEL 728
Query: 601 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 660
GD + + AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L++
Sbjct: 729 -VGDPDAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLAREQIAGIAEIQLGRLRKRLVER 787
Query: 661 NMDLKISKAALKKISNIGFDLIYGAR 686
+ L++S+ A+ K+ +G+D +YGAR
Sbjct: 788 ELSLELSQEAMDKLIAVGYDPVYGAR 813
>gi|374619251|ref|ZP_09691785.1| ATP-dependent chaperone ClpB [gamma proteobacterium HIMB55]
gi|374302478|gb|EHQ56662.1| ATP-dependent chaperone ClpB [gamma proteobacterium HIMB55]
Length = 873
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/676 (60%), Positives = 541/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E+ L+KYT+DLT +A G+LDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEGVQSADAEQQRQALEKYTVDLTARAEAGELDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI+EGLAQR++NGEVP L K+IL LD+ LLAG K+RG+FE+RLK +L
Sbjct: 205 IGEPGVGKTAIIEGLAQRVVNGEVPEGLKGKRILALDLGSLLAGAKFRGDFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+ +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 ELGKEDGRVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQ++LV+EP+ E+TI+ILRGL+++YEVHH V ITD AI+AA+ LS RYI+DR
Sbjct: 325 KDAALERRFQRVLVDEPNEEDTIAILRGLKERYEVHHSVAITDSAIIAAARLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K++ E++ K++ L+
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPESMDKLERRLIQLKIEREAVKKDTTEAAVKQVELL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++I++++ ++A+LE++W EK +++ S QIK +IE+ + + A R D +S+++YG
Sbjct: 445 DEQIDQVQREFADLEEVWTAEKAVVQGSAQIKSDIEQAKQDLEAAHRTGDLARMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L+ D P TLL+++V +E+AE+VSR TGIPVSK+++ +R +
Sbjct: 505 VIPELEKRLEAAEGADQPEP------TLLRSRVTEDEVAEVVSRWTGIPVSKMLEGDRSR 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RVVGQDEA++ V+NAIRRSR+GLSD KRP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEASLKERVVGQDEAVTVVANAIRRSRAGLSDPKRPNGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++++S++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 AEFLFDSDQSMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I++M D + +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQDMADDDYDDMKR 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM V FRPEFINRID+ +VF L +I +IA IQL L +L + L+IS A
Sbjct: 739 EVMGAVAENFRPEFINRIDESVVFHPLGADHIRAIAKIQLQGLAERLEDRELTLEISDAV 798
Query: 671 LKKISNIGFDLIYGAR 686
+++S +GFD ++GAR
Sbjct: 799 FEQLSRVGFDPVFGAR 814
>gi|152997611|ref|YP_001342446.1| ATPase [Marinomonas sp. MWYL1]
gi|150838535|gb|ABR72511.1| ATPase AAA-2 domain protein [Marinomonas sp. MWYL1]
Length = 860
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/677 (60%), Positives = 544/677 (80%), Gaps = 6/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ EE+ L KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRR KNNPVL
Sbjct: 145 GGDSVNDPDAEENRQALDKYTVDLTARAAEGKLDPVIGRDDEIRRTIQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+A L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMAALIAGAKYRGEFEERLKALLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 265 ELAKQEGQVILFIDEIHTMVGAGKSEGSMDAGNMLKPALARGELHCVGATTLDEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP + ++I+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVLDSIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA ++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D++SK RL +
Sbjct: 385 QLPDKAIDLIDEAGSRIRMEMDSKPEDMDRLERRLIQLKIEKEALKKEKDKASKLRLEEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
EI+ L+ ++++LE+IW EK ++ +Q++KE++E VR ++ +A R + +S+L+YG
Sbjct: 445 DVEIDNLQKQFSDLEEIWNAEKAAVQGAQKLKEDLETVRHEMEEARRSGNLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE +++ S+ + + LLK +V EEIA +VSR TGIP+ K+++ ER+K
Sbjct: 505 VIPMLEAEIEKASKAE-----ETTETRLLKRRVTEEEIATVVSRWTGIPIDKMLEGERDK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L + V+GQDEA+ AVSNA+RRSRSGL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 560 LLRMEDALHESVMGQDEAVLAVSNAVRRSRSGLADPNRPNGSFLFLGPTGVGKTELCKSL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 620 ARFLFDTEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E D+ E IK
Sbjct: 680 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEYRSADQYEEIK 739
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V ++FRPEFINRID+ +VF L + I IA +QL+ L ++L +M M L ++ A
Sbjct: 740 AKVMEVVGMHFRPEFINRIDETVVFHPLMKSQIKGIATVQLSHLNDRLAEMGMSLVLTDA 799
Query: 670 ALKKISNIGFDLIYGAR 686
A ++ +G+D +YGAR
Sbjct: 800 ASDQLVEVGYDPVYGAR 816
>gi|86148867|ref|ZP_01067123.1| ClpB protein, partial [Vibrio sp. MED222]
gi|85833345|gb|EAQ51547.1| ClpB protein [Vibrio sp. MED222]
Length = 757
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 45 GGQKVDDPNAEDRRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 104
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG+PGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 105 IGQPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLN 164
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 165 ELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 224
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 225 KDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDR 284
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL +
Sbjct: 285 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTL 344
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+++ E +A LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 345 QSELSEKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 404
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 405 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEK 458
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 459 LLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 518
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 519 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 578
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 579 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFNTLDYQGIK 638
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L +++I SIA IQL LK ++ +L++S
Sbjct: 639 NEVMEVVGKHFRPEFLNRVDESVVFHPLGQEHIESIAAIQLEHLKKRMEDNGYELEVSDK 698
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ IS +GFD +YGAR
Sbjct: 699 ALRLISKVGFDPVYGAR 715
>gi|227329202|ref|ZP_03833226.1| protein disaggregation chaperone [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 858
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/728 (57%), Positives = 567/728 (77%), Gaps = 18/728 (2%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
G+ N V G + ++ Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVL
Sbjct: 135 GVTNAIDQVRGGDQVNDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L ++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
LS RYI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D
Sbjct: 375 MLSNRYIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+S+KRL L+ E+++ E +Y+ E+ WK EK + +Q IK +E+ ++ + +A R+ D
Sbjct: 435 EASQKRLELLSAELDQKEREYSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+S+L+YG++ +LE+ L +Q++ LL+ +V EIA++++R TGIPV
Sbjct: 495 LGRMSELQYGKIPELEKQLAAATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
S++++ E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTG
Sbjct: 549 SRMLESEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCKTL+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
+PYS+ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E
Sbjct: 669 RPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE- 727
Query: 601 EKGDKEIIKL--AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 658
G++ ++ V+ V FRPEFINRID+++VF L R +I SIA IQL L +L
Sbjct: 728 RFGERSYTEMRDMVLEVVSHNFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLE 787
Query: 659 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
+ + I+ AAL + +GFD +YGAR + K+++ L+ ++P A I G LI
Sbjct: 788 ERGYSVTITDAALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLI 839
Query: 719 NKGPQSLD 726
P +LD
Sbjct: 840 PGKPITLD 847
>gi|386022308|ref|YP_005940333.1| ClpB protein [Pseudomonas stutzeri DSM 4166]
gi|327482281|gb|AEA85591.1| ClpB protein [Pseudomonas stutzeri DSM 4166]
Length = 854
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/666 (62%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLEKE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IWK EK ++ S QI+++IE+ + + A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWKSEKAEVQGSAQIQQKIEQAKADLEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDPDAQRAAVMDAVAHHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLGREQIAGIAEIQLGRLRKRLAERELSLELSQEAMDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|354596494|ref|ZP_09014511.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
gi|353674429|gb|EHD20462.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
Length = 857
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/719 (58%), Positives = 564/719 (78%), Gaps = 17/719 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEQVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLA RI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLALRIVNGEVPEGLKNKRVLSLDMGSLVAGAKYRGEFEERLKGVLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+I+IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+KRL L+
Sbjct: 385 KLPDKAIDLIDEAASSIRIQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASQKRLELL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG
Sbjct: 445 SSELEEKEREYSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLAAATQLE------GKTMHLLRNRVTDTEIAEVLARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEALHQRVIGQDEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E+
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYAEMR 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
+ V+ V FRPEFINRID+++VF L R++I SIA IQL L +L + + I+
Sbjct: 739 GM-VLEVVSHSFRPEFINRIDEVVVFHPLGRQHIASIAKIQLQRLYKRLEERGYTVTITD 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
AAL+++ IGFD +YGAR + K+++ L+ ++P A I G LI P +LD
Sbjct: 798 AALERLGEIGFDPVYGARPL---KRAIQQLI-----ENPLAQQILSGKLIPGKPVTLDA 848
>gi|417949670|ref|ZP_12592802.1| chaperone ClpB protein [Vibrio splendidus ATCC 33789]
gi|342807810|gb|EGU42988.1| chaperone ClpB protein [Vibrio splendidus ATCC 33789]
Length = 857
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDPNAEDRRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 265 ELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQHIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E++ E +A LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 QAELSDKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLKMEGVLHKRVIGQGEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS KI+E D + IK
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSKIQENFNTLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L +++I SIA+IQL L ++ +L++S+
Sbjct: 739 NEVMEVVGKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLQHLSKRMEDNGYELEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|421080487|ref|ZP_15541408.1| Protein disaggregation chaperone [Pectobacterium wasabiae CFBP
3304]
gi|401704776|gb|EJS94978.1| Protein disaggregation chaperone [Pectobacterium wasabiae CFBP
3304]
Length = 858
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/718 (57%), Positives = 564/718 (78%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEQVNDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+
Sbjct: 385 QLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+++ E +Y+ ++ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG
Sbjct: 445 SAELDQKEREYSQQDEEWKAEKASLTGTQNIKASLEQAKIVLEQARRQGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q++ LL+ +V EIA++++R TGIPVS++++ E+EK
Sbjct: 505 KIPELEKQLAAATQQE------GKTVHLLRNRVTDAEIADVLARWTGIPVSRMLESEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHRRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEM 737
Query: 611 --AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
V++ V FRPEFINRID+++VF L R +I SIA IQL L +L + + I+
Sbjct: 738 RDMVLDVVSHSFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYSVTIAD 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
+AL + +GFD +YGAR + K+++ L+ ++P A I G LI P +LD
Sbjct: 798 SALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPITLD 847
>gi|83648559|ref|YP_436994.1| chaperone activity ATPase ATP-binding subunit [Hahella chejuensis
KCTC 2396]
gi|83636602|gb|ABC32569.1| ATPase with chaperone activity, ATP-binding subunit [Hahella
chejuensis KCTC 2396]
Length = 859
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/678 (60%), Positives = 549/678 (80%), Gaps = 8/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L ++TIDLT +A GKLDPVIGRDDEIRR IQVLQRR KNNPVL
Sbjct: 145 GGEKVQDQGAEESRQALDRFTIDLTSRATEGKLDPVIGRDDEIRRTIQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLALDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR++IE
Sbjct: 265 ELAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYREFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHHGVEITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHGVEITDSAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLK++ EA+K+E D +SKK + +
Sbjct: 385 QLPDKAIDLVDEAASQIRMEIDSKPEPLDRLERRLIQLKMQREALKKEKDAASKKSVDEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+I+++E ++A+LE++W EK ++ +QQIK ++E+ R+ + A R+ D +S+L+YG
Sbjct: 445 NTQIDEMEKEFADLEEVWSSEKAALQGTQQIKSQLEQARVDLENARRQGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++ + LL+ KV EEIAEIVS+ TGIPV+K+++ EREK
Sbjct: 505 RIPELEKQLDMASQAEML------EMRLLRNKVSEEEIAEIVSKWTGIPVAKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEEALHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 AGFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+ M D+ I
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQAMGGQDENYNEI 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AV+ V +FRPEFINRID+++VF L + I IA IQL IL +L + ++ +++S
Sbjct: 739 KDAVLEVVGRHFRPEFINRIDEVVVFHPLTAEQIRGIALIQLEILNRRLQEQDLKVELSA 798
Query: 669 AALKKISNIGFDLIYGAR 686
A+ ++ +GFD IYGAR
Sbjct: 799 EAMATLAEVGFDPIYGAR 816
>gi|261820453|ref|YP_003258559.1| protein disaggregation chaperone [Pectobacterium wasabiae WPP163]
gi|261604466|gb|ACX86952.1| ATP-dependent chaperone ClpB [Pectobacterium wasabiae WPP163]
Length = 858
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/718 (57%), Positives = 563/718 (78%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEQVNDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+
Sbjct: 385 QLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+++ E +Y+ ++ WK EK + +Q +K +E+ ++ + +A R+ D +S+L+YG
Sbjct: 445 SAELDQKEREYSQQDEEWKAEKASLTGTQNVKASLEQAKIALEQARRQGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q++ LL+ +V EIA++++R TGIPVS++++ E+EK
Sbjct: 505 KIPELEKQLAAATQQE------GKTVHLLRNRVTDAEIADVLARWTGIPVSRMLESEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEM 737
Query: 611 --AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
V++ V FRPEFINRID+++VF L R +I SIA IQL L +L + + I+
Sbjct: 738 RDMVLDVVSHSFRPEFINRIDEVVVFHPLGRGHITSIAQIQLQRLYKRLEERGYSVTITN 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AAL + +GFD +YGAR + K+++ L+ ++P A I G LI P LD
Sbjct: 798 AALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPIILD 847
>gi|297182614|gb|ADI18773.1| hypothetical protein [uncultured gamma proteobacterium
HF4000_36I10]
Length = 870
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/677 (62%), Positives = 556/677 (82%), Gaps = 4/677 (0%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
G N+ + E L+KYTIDLTE+AR GKLDPVIGRD+EIRRA+QVLQRR+KNNPVLI
Sbjct: 146 GANVNDPEAEGARQALEKYTIDLTERAREGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L E
Sbjct: 206 GEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRLLSLDLGSLLAGAKFRGEFEERLKAVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYRQY+EK
Sbjct: 266 LSKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLNEYRQYLEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+LV EP E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS RYI+DR
Sbjct: 326 DAALERRFQKVLVGEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAATRLSQRYITDRQ 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDE+A++I++EIDSKPE MD+LERRLIQLKI+ EA+K++ DES++K+L +
Sbjct: 386 LPDKAIDLIDESASRIRMEIDSKPEEMDRLERRLIQLKIQREAVKKDEDESARKQLEKLN 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
+I+K+ +YA+LE+IW EK ++ + QIK E+EK +L++ A R SD +S+L+YG
Sbjct: 446 ADIDKVGKEYADLEEIWLAEKASLQGANQIKSELEKAKLELESARRASDLTRMSELQYGV 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ +LE+ L ++ N+A K LL+ KV EE+AE+VSR TGIPV+K+++ EREKL
Sbjct: 506 IPELEKRLASAGEEANNPENDARK--LLRNKVTEEEVAEVVSRWTGIPVNKMLEGEREKL 563
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L +E+ L +RVVGQDEA+ AVS+A+RRSR+GLSD RP GSF+F+GPTGVGKTELCK L+
Sbjct: 564 LRMEDELHRRVVGQDEAVVAVSHAVRRSRAGLSDPNRPNGSFLFMGPTGVGKTELCKALA 623
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
++++EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE+
Sbjct: 624 TFLYDSEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDEV 683
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEIIK 609
EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ + G + IK
Sbjct: 684 EKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELARNEGGYDAIK 743
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AV+ V +FRPEFINR+D+++VFR L + + +IA+IQL L +L + + L +S A
Sbjct: 744 DAVLEVVSTHFRPEFINRLDEMVVFRPLEQDQVRAIADIQLAYLDKRLAERELKLSLSDA 803
Query: 670 ALKKISNIGFDLIYGAR 686
A+ K++ +GFD ++GAR
Sbjct: 804 AMDKLTAVGFDPVFGAR 820
>gi|336124918|ref|YP_004566966.1| ClpV protein [Vibrio anguillarum 775]
gi|335342641|gb|AEH33924.1| ClpV protein [Vibrio anguillarum 775]
Length = 863
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 150 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 209
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 210 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLN 269
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G G+ EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 270 ELAKEEGNVILFIDELHTMVGAGRGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 329
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 330 KDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 389
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 390 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEKRLQVL 449
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E ++A LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 450 NEELKVKEREFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 509
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ V EIAE++S+ TGIPVSK+++ E+EK
Sbjct: 510 RIPELEKQLDLATQAEMQ------EMTLLRNNVTDVEIAEVLSKQTGIPVSKMLEAEKEK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ EA+ VSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 564 LLQMEDALHQRVIGQVEAVEVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE
Sbjct: 624 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSVILLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D E IK
Sbjct: 684 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSQIQEKFASLDYEGIK 743
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L ++ I SIA+IQL L ++ + L++S+
Sbjct: 744 KEVMEIVGKHFRPEFLNRVDESVVFHPLAQEQIKSIASIQLARLGKRMEEKGYQLEVSEK 803
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ IS +GFD +YGAR
Sbjct: 804 ALELISQVGFDPVYGAR 820
>gi|411011697|ref|ZP_11388026.1| ATP-dependent chaperone protein ClpB [Aeromonas aquariorum AAK1]
Length = 857
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
GK + EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGKKVEDANAEENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 265 DLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI + + +Y LE++WK EK + +Q IK +E+ R ++ A R D +S+L+YG
Sbjct: 445 NQEIGEKDREYNELEEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ +V EIA++++R TGIPV+++++ EREK
Sbjct: 505 RIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDQLHSRVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M + FRPEFINRID+ +VF L ++I SIA IQL L ++L ++++S+A
Sbjct: 739 AMLMEVLARSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMSRLEAQGYEVEVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
L K+ + GFD +YGAR
Sbjct: 799 LLNKLVHAGFDPVYGAR 815
>gi|385870630|gb|AFI89150.1| ATP-dependent chaperone ClpB [Pectobacterium sp. SCC3193]
Length = 858
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/718 (57%), Positives = 563/718 (78%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEQVNDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+KRL L+
Sbjct: 385 QLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+++ E +Y+ ++ WK EK + +Q +K +E+ ++ + +A R+ D +S+L+YG
Sbjct: 445 SAELDQKEREYSQQDEEWKAEKASLTGTQNVKASLEQAKIALEQARRQGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q++ LL+ +V EIA++++R TGIPVS++++ E+EK
Sbjct: 505 KIPELEKQLAAATQQE------GKTVHLLRNRVTDAEIADVLARWTGIPVSRMLESEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G++ ++
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGERSYTEM 737
Query: 611 --AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
V++ V FRPEFINRID+++VF L R +I SIA IQL L +L + + I+
Sbjct: 738 RDMVLDVVSHSFRPEFINRIDEVVVFHPLGRGHITSIAQIQLQRLYKRLEERGYSVTITN 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AAL + +GFD +YGAR + K+++ L+ ++P A I G LI P LD
Sbjct: 798 AALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPIILD 847
>gi|384082013|ref|ZP_09993188.1| ATP-dependent protease [gamma proteobacterium HIMB30]
Length = 857
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/690 (57%), Positives = 548/690 (79%), Gaps = 8/690 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ ++ DEE+ G L KY +DLT +A GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 144 GGESVQTENDEENRGALDKYCLDLTARASDGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLA RI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +LK
Sbjct: 204 IGEPGVGKTAIVEGLAARIVNGEVPEGLKGKRVLSLDMGSLIAGAKFRGEFEERLKAVLK 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY E
Sbjct: 264 ELAQQEGQIILFIDEIHTMVGAGKSEGAMDAGNMLKPALARGELHCVGATTLDEYRQYFE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV EP +TI+ILRGL+ KYEVHHGVEI+D AI+AA++LS RYI+DR
Sbjct: 324 KDAALERRFQKVLVGEPTETDTIAILRGLKPKYEVHHGVEISDSAIIAAAKLSSRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++I++E+DSKPE +D+L+RRLIQLKIE EA+K+E DE+SK RL+ +
Sbjct: 384 QLPDKAIDLMDEAASRIRLEMDSKPEELDRLDRRLIQLKIEREALKKEKDEASKARLIEL 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I ++ + + LE++W EK Q IKEE+++ + + +A R D +S+++YG
Sbjct: 444 EETIAEVAKEASGLEEVWASEKAQTHGVQAIKEELDRAEIDLEQARRAGDLARMSEIQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ L EK D Q N +++ L++++V EEIAE+VSR TGIPV+K+++ E++K
Sbjct: 504 VIPSL-----EKRMADAQEANESDEGKLVRSRVTEEEIAEVVSRWTGIPVAKMLEGEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQD A++AV+NA+RRSRSGLSD KRP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLQMEDALHARVVGQDTAVTAVANAVRRSRSGLSDPKRPNGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYE+GGYLTE VRR+PY+++LLDE
Sbjct: 619 AEFLFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEQGGYLTEAVRRRPYAVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F N+++VMTSNLGSD I+ M E I+
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFSNSVVVMTSNLGSDLIQSMVGESHETIRD 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +F+PEFINRIDD +VF L R++I I ++QL+ L+ +L ++ +++
Sbjct: 739 AVMGVVSTHFQPEFINRIDDAVVFHALGREHIRGILDVQLSYLRARLDELEYGFELTDEV 798
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLK 700
+K+ G+D +YGAR + K+++ + L+
Sbjct: 799 AEKLCEAGYDPVYGARPL---KRAIQVYLE 825
>gi|421618247|ref|ZP_16059225.1| ClpB protein [Pseudomonas stutzeri KOS6]
gi|409779801|gb|EKN59452.1| ClpB protein [Pseudomonas stutzeri KOS6]
Length = 854
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/676 (60%), Positives = 549/676 (81%), Gaps = 7/676 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEAVNDPNAEESRQALDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA ++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++KRL +
Sbjct: 385 QLPDKAIDLIDEAGSRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I +LE +YA+LE+IWK EK ++ S QI+++IE+ + ++ A RK D +++L+YG
Sbjct: 445 EDDIARLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LER L+ Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 IIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDMLHTRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE
Sbjct: 619 AEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + +
Sbjct: 679 VEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQIQEL-VGDPDAQRA 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM+ V +FRPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ A
Sbjct: 738 AVMDAVAHHFRPEFINRIDEVVVFDPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEA 797
Query: 671 LKKISNIGFDLIYGAR 686
+ K+ +G+D +YGAR
Sbjct: 798 MDKLVAVGYDPVYGAR 813
>gi|163750160|ref|ZP_02157403.1| clpB protein [Shewanella benthica KT99]
gi|161330217|gb|EDQ01199.1| clpB protein [Shewanella benthica KT99]
Length = 857
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/716 (58%), Positives = 555/716 (77%), Gaps = 15/716 (2%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
GK + E+ LKK+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLI
Sbjct: 146 GKAVDDPNAEDQRQALKKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRI+NGEVP + +K++L LD+ L+AG KYRGEFE+RLK +L E
Sbjct: 206 GEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
+S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEK
Sbjct: 266 LSQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
D A ERRFQK+LVEEP++E+TI+ILRGL+ +YE+HH VEITDPAIVAA+ +S RYISDR
Sbjct: 326 DGALERRFQKVLVEEPNVEDTIAILRGLKDRYELHHHVEITDPAIVAAASMSNRYISDRK 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I+I+IDSKPE++DKLERR IQLKIE +A+ +E DE+S +RL ++
Sbjct: 386 LPDKAIDLIDEAASSIRIQIDSKPEVLDKLERRSIQLKIEEQALAKETDEASIRRLDSLR 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
KE+ ++ K A L +IW EK + +Q IK ++E+ RL ++ A R SD +S+L+YG
Sbjct: 446 KELQDVDAKAAELNEIWHTEKAALAGTQHIKADLEQARLNLDVARRASDLTRMSELQYGR 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ LE+ L +Q ++Q TLL+ KV EIAE++SR TGIPV+K+++ E+EKL
Sbjct: 506 IPALEKQLDLAAQAEMQ------DMTLLRHKVTDVEIAEVLSRVTGIPVAKMLEGEKEKL 559
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L +E L + V+GQ+EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTELCK+L+
Sbjct: 560 LQMEKALHESVIGQNEAVDAVSNAIRRSRAGLADPERPIGSFLFLGPTGVGKTELCKSLA 619
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+ILLDE+
Sbjct: 620 KFLFDTEAAMVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAIRRKPYSVILLDEV 679
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKL 610
EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I++ +K
Sbjct: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQDRCGSLSYSEMKA 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VMN V FRPEF+NRID+ +VF L+ K+I IA+IQ+ +L+ +L + + +L ISK A
Sbjct: 740 EVMNVVVHSFRPEFLNRIDETVVFHPLDEKHIEYIAHIQIKLLQQRLAEKDYELIISKDA 799
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
L I+ GFD YGAR + K++L + ++P A I G ++ P L+
Sbjct: 800 LAFIAKAGFDPAYGARPL---KRAL-----QQEVENPLAQRILSGSIVPGKPIKLE 847
>gi|227115221|ref|ZP_03828877.1| protein disaggregation chaperone [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 858
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/728 (57%), Positives = 567/728 (77%), Gaps = 18/728 (2%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
G+ N V G + ++ Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVL
Sbjct: 135 GVTNAIERVRGGDQVNDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L ++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
LS RYI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D
Sbjct: 375 MLSNRYIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+S+KRL L+ E+++ E +Y+ E+ WK EK + +Q IK +E+ ++ + +A R+ D
Sbjct: 435 EASQKRLELLSAELDQKEREYSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+S+L+YG++ +LE+ L +Q++ LL+ +V EIA++++R TGIPV
Sbjct: 495 LGRMSELQYGKIPELEKQLAAATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
S++++ E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTG
Sbjct: 549 SRMLESEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCKTL+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
+PYS+ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E
Sbjct: 669 RPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE- 727
Query: 601 EKGDKEIIKL--AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 658
G++ ++ V+ V FRPEFINRID+++VF L R +I SIA IQL L +L
Sbjct: 728 RFGERSYTEMRDMVLEVVSHSFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLE 787
Query: 659 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
+ + I+ AAL + +GFD +YGAR + K+++ L+ ++P A + G LI
Sbjct: 788 ERGYSVTITDAALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQMLGGKLI 839
Query: 719 NKGPQSLD 726
P +LD
Sbjct: 840 PGKPITLD 847
>gi|288550291|ref|ZP_06390995.1| ATP-dependent chaperone protein ClpB [Enterobacter cancerogenus
ATCC 35316]
gi|288315678|gb|EFC54616.1| ATP-dependent chaperone protein ClpB [Enterobacter cancerogenus
ATCC 35316]
Length = 861
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/709 (58%), Positives = 557/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELDEKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ Q +I + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 509 KIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLESEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQDLHHRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 743 ELVMGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDD 802
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 803 ALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 843
>gi|403059616|ref|YP_006647833.1| endopeptidase Clp ATP-binding subunit ClpB [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|402806942|gb|AFR04580.1| endopeptidase Clp ATP-binding chain B (ClpB) [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 858
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/728 (57%), Positives = 567/728 (77%), Gaps = 18/728 (2%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
G+ N V G + ++ Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVL
Sbjct: 135 GVTNAIERVRGGDQVNDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L ++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
LS RYI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D
Sbjct: 375 MLSNRYIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+S+KRL L+ E+++ E +Y+ E+ WK EK + +Q IK +E+ ++ + +A R+ D
Sbjct: 435 EASQKRLELLSAELDQKEREYSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+S+L+YG++ +LE+ L +Q++ LL+ +V EIA++++R TGIPV
Sbjct: 495 LGRMSELQYGKIPELEKQLAAATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
S++++ E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTG
Sbjct: 549 SRMLESEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCKTL+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
+PYS+ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E
Sbjct: 669 RPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE- 727
Query: 601 EKGDKEIIKL--AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 658
G++ ++ V+ V FRPEFINRID+++VF L R +I SIA IQL L +L
Sbjct: 728 RFGERSYTEMRDMVLEVVSHSFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLE 787
Query: 659 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
+ + I+ AAL + +GFD +YGAR + K+++ L+ ++P A + G LI
Sbjct: 788 ERGYSVTITDAALDVLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQMLGGKLI 839
Query: 719 NKGPQSLD 726
P +LD
Sbjct: 840 PGKPITLD 847
>gi|417879013|ref|ZP_12523600.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH3]
gi|342230396|gb|EGT95235.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH3]
Length = 859
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/694 (59%), Positives = 555/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL N+ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I ++E +Y +LE++WK EKTL++ ++Q + E++K R+ K
Sbjct: 426 VKKDEDAGSKAEVTHLEKQITEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 486 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLL++E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMMQGEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 721 QDVRELGEGATDDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDR 779
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + +A + + GFD +YGAR
Sbjct: 780 LRSRLVDRDMSLTVDDSAFDLLIDAGFDPVYGAR 813
>gi|262279691|ref|ZP_06057476.1| ATP-dependent chaperone ClpB [Acinetobacter calcoaceticus RUH2202]
gi|262260042|gb|EEY78775.1| ATP-dependent chaperone ClpB [Acinetobacter calcoaceticus RUH2202]
Length = 859
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/694 (59%), Positives = 554/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL ++ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTPDSLRKVIEHIRGSDKVMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L SK++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+ K
Sbjct: 426 VKKDEDVGSKAEVTHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 486 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLLN+E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMLQGEREKLLNMEGFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 721 QDVRELGEGATDDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDR 779
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + A + + GFD +YGAR
Sbjct: 780 LRSRLVDRDMSLTVDDTAFDLLIDAGFDPVYGAR 813
>gi|148652685|ref|YP_001279778.1| ATPase [Psychrobacter sp. PRwf-1]
gi|148571769|gb|ABQ93828.1| ATPase AAA-2 domain protein [Psychrobacter sp. PRwf-1]
Length = 862
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/675 (58%), Positives = 545/675 (80%), Gaps = 1/675 (0%)
Query: 13 KNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIG 72
+ + +Q E+ L KYTI+LTE+A LGKLDPVIGRD+EIRR IQVL RR+KNNPVLIG
Sbjct: 144 QTVDNQNAEDQRDALNKYTINLTERAELGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIG 203
Query: 73 EPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEI 132
EPGVGKTAIVEGLAQ+I+NG+VP L K++L LD+ L+AG KYRGEFE+RLK +L ++
Sbjct: 204 EPGVGKTAIVEGLAQKIVNGDVPEGLRRKEVLSLDLGALIAGAKYRGEFEERLKSVLNDL 263
Query: 133 SNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKD 192
+ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKD
Sbjct: 264 AKQEGNVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 323
Query: 193 AAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFM 252
AA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+DR +
Sbjct: 324 AALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDRKL 383
Query: 253 PDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKK 312
PDKAIDL+DEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D ++ ++ +
Sbjct: 384 PDKAIDLVDEAASRLRMEMDSKPEALGKLDSRLIQLKMQREVLKNEEDAGAQAERKVLDE 443
Query: 313 EINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGEL 372
+I +LE +YA+L +IW+ EK L+K SQQ+K+E++K R+ +KA+R+ D++T+SKL+Y +
Sbjct: 444 QIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMSKLQYETI 503
Query: 373 NKLE-RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+LE RI + + + N LL+ KV EIAE+V+ TGIPV++++Q EREK+
Sbjct: 504 PQLEKRITESDLAEQKEQTGEGNGIKLLRNKVTDNEIAEVVAAATGIPVNRMLQGEREKM 563
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L +E L +RVVGQDEA+ +V+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K+L+
Sbjct: 564 LTMEERLHERVVGQDEAVQSVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKSLA 623
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+
Sbjct: 624 NFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEV 683
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLA 611
EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM D E IK +
Sbjct: 684 EKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMAGDDYEEIKAS 743
Query: 612 VMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAAL 671
VM V +FRPEF+NRID+I+VF L + IA+IQL+ L+++L + MD+K+S A+
Sbjct: 744 VMESVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIADIQLDRLRSRLKEREMDIKLSADAM 803
Query: 672 KKISNIGFDLIYGAR 686
+ +G+D +YGAR
Sbjct: 804 HMLVAVGYDPVYGAR 818
>gi|283786204|ref|YP_003366069.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
gi|282949658|emb|CBG89277.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
Length = 857
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/709 (58%), Positives = 556/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELNDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAKIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|308187863|ref|YP_003931994.1| chaperone protein clpB [Pantoea vagans C9-1]
gi|308058373|gb|ADO10545.1| Chaperone protein clpB [Pantoea vagans C9-1]
Length = 857
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG
Sbjct: 445 ETELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLSYPEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NRID+++VF L K+I SIA IQL L +L + L IS+
Sbjct: 739 DIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISED 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+K ++ G+D +YGAR
Sbjct: 799 AIKLLAENGYDPVYGAR 815
>gi|395234382|ref|ZP_10412606.1| protein disaggregation chaperone [Enterobacter sp. Ag1]
gi|394730828|gb|EJF30655.1| protein disaggregation chaperone [Enterobacter sp. Ag1]
Length = 857
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/709 (58%), Positives = 555/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASQKRLSML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELEDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEKELHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + + IS
Sbjct: 739 DLVLGVVSQSFRPEFINRIDEVVVFHPLGERHIASIAQIQLQRLYKRLEERGYGVSISDD 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK IS G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLISENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|377579335|ref|ZP_09808305.1| chaperone protein ClpB [Escherichia hermannii NBRC 105704]
gi|377539445|dbj|GAB53470.1| chaperone protein ClpB [Escherichia hermannii NBRC 105704]
Length = 857
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/722 (57%), Positives = 560/722 (77%), Gaps = 23/722 (3%)
Query: 6 NSLNVN--------GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAI 57
N+ N+N G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR I
Sbjct: 132 NTANINQAIAQMRGGESVNDQGAEDQRQALKKYTLDLTERAEQGKLDPVIGRDEEIRRTI 191
Query: 58 QVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKY 117
QVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KY
Sbjct: 192 QVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKY 251
Query: 118 RGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCI 177
RGEFE+RLK +L ++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+
Sbjct: 252 RGEFEERLKGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCV 311
Query: 178 GATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIV 237
GATTL+EYRQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIV
Sbjct: 312 GATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIV 371
Query: 238 AASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKR 297
AA+ LS+RYI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +
Sbjct: 372 AAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALLK 431
Query: 298 EYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATR 357
E DE+SKKRL ++ +E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R
Sbjct: 432 ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491
Query: 358 KSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTG 417
D +S+L+YG++ +LE+ L +Q + LL+ KV EIAE+++R TG
Sbjct: 492 VGDLARMSELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTG 545
Query: 418 IPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLG 477
IPVS++++ EREKLL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLG
Sbjct: 546 IPVSRMMESEREKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLG 605
Query: 478 PTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEI 537
PTGVGKTELCK L+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE
Sbjct: 606 PTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEA 665
Query: 538 VRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKI 597
VRR+PYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I
Sbjct: 666 VRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI 725
Query: 598 KE-MEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNK 656
+E D +K V+ V FRPEFINRID+++VF L +K+I SIA IQL L +
Sbjct: 726 QERFGDLDYSHMKDMVLTVVSQNFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYKR 785
Query: 657 LLKMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGD 716
L + +++S AL+ + G+D +YGAR + K+++ + ++P A I G+
Sbjct: 786 LEERGYQVQMSDEALRLLGENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGE 837
Query: 717 LI 718
LI
Sbjct: 838 LI 839
>gi|197284295|ref|YP_002150167.1| protein disaggregation chaperone [Proteus mirabilis HI4320]
gi|227357800|ref|ZP_03842148.1| chaperone ClpB [Proteus mirabilis ATCC 29906]
gi|425067193|ref|ZP_18470309.1| chaperone ClpB [Proteus mirabilis WGLW6]
gi|425073294|ref|ZP_18476400.1| chaperone ClpB [Proteus mirabilis WGLW4]
gi|194681782|emb|CAR41000.1| chaperone ClpB (heat-shock protein F84.1) [Proteus mirabilis
HI4320]
gi|227161910|gb|EEI46928.1| chaperone ClpB [Proteus mirabilis ATCC 29906]
gi|404595272|gb|EKA95817.1| chaperone ClpB [Proteus mirabilis WGLW4]
gi|404601488|gb|EKB01897.1| chaperone ClpB [Proteus mirabilis WGLW6]
Length = 858
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/677 (60%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDQNAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+L+RR+IQLK+E +A+++E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPEALDRLDRRIIQLKLEQQALQKESDDASKKRLAML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ + E +Y++LE+ WK EK + +Q IK E+E+ R+ + +A R D +S+++YG
Sbjct: 445 NEELAEKEKEYSSLEEEWKAEKAELTGTQHIKAELEQARIALEQARRSGDLAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E ++ + + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 505 QIPTLEKQLAEANKTEDK------HMKLLRNKVTDAEIAEILARWTGIPVSRMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHRRVIGQDEAVNAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ADFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGTLDYPAMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRID+++VF L ++NI +IA IQL L +L + + I+ A
Sbjct: 739 TIVMDVVGHHFRPEFINRIDEVVVFHPLGKENIAAIAQIQLRRLYQRLEERGYHVTITGA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+K+ +GFD IYGAR
Sbjct: 799 ALEKLGEVGFDPIYGAR 815
>gi|401764807|ref|YP_006579814.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400176341|gb|AFP71190.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 857
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/709 (58%), Positives = 557/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ Q +I + LL+ KV EIAE+++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 739 DLVMGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDD 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|146283954|ref|YP_001174107.1| ClpB protein [Pseudomonas stutzeri A1501]
gi|145572159|gb|ABP81265.1| ClpB protein [Pseudomonas stutzeri A1501]
Length = 854
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/666 (61%), Positives = 546/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLEKE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IWK EK ++ S QI+++IE+ + + A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWKSEKAEVQGSAQIQQKIEQAKADLEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+++ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQDL-VGDPDAQRAAVMDAVAHHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLGREQIAGIAEIQLGRLRKRLAERELSLELSQEAMDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|169796605|ref|YP_001714398.1| ATP-dependent protease [Acinetobacter baumannii AYE]
gi|184157485|ref|YP_001845824.1| ATPase [Acinetobacter baumannii ACICU]
gi|213156282|ref|YP_002318702.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB0057]
gi|215484066|ref|YP_002326291.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB307-0294]
gi|239503505|ref|ZP_04662815.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB900]
gi|260557553|ref|ZP_05829768.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301346300|ref|ZP_07227041.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB056]
gi|301510716|ref|ZP_07235953.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB058]
gi|301597427|ref|ZP_07242435.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB059]
gi|332853545|ref|ZP_08434809.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6013150]
gi|332868410|ref|ZP_08438141.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6013113]
gi|332872452|ref|ZP_08440423.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6014059]
gi|384131580|ref|YP_005514192.1| clpB [Acinetobacter baumannii 1656-2]
gi|384142570|ref|YP_005525280.1| ATP-dependent protease [Acinetobacter baumannii MDR-ZJ06]
gi|385236903|ref|YP_005798242.1| chaperone ATPase [Acinetobacter baumannii TCDC-AB0715]
gi|387124549|ref|YP_006290431.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii MDR-TJ]
gi|403675029|ref|ZP_10937230.1| clpB [Acinetobacter sp. NCTC 10304]
gi|407932224|ref|YP_006847867.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii TYTH-1]
gi|416148412|ref|ZP_11602323.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
baumannii AB210]
gi|417543969|ref|ZP_12195055.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC032]
gi|417551549|ref|ZP_12202627.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-18]
gi|417552182|ref|ZP_12203252.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-81]
gi|417562555|ref|ZP_12213434.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC137]
gi|417565785|ref|ZP_12216659.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC143]
gi|417568293|ref|ZP_12219156.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC189]
gi|417572053|ref|ZP_12222907.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Canada BC-5]
gi|417579119|ref|ZP_12229952.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-17]
gi|417869415|ref|ZP_12514402.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH1]
gi|417872866|ref|ZP_12517752.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH2]
gi|417883709|ref|ZP_12527933.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH4]
gi|421199178|ref|ZP_15656342.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC109]
gi|421205359|ref|ZP_15662450.1| ATP-dependent protease [Acinetobacter baumannii AC12]
gi|421455087|ref|ZP_15904434.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-123]
gi|421536750|ref|ZP_15982981.1| ATP-dependent protease [Acinetobacter baumannii AC30]
gi|421621489|ref|ZP_16062408.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC074]
gi|421625407|ref|ZP_16066259.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC098]
gi|421628517|ref|ZP_16069287.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC180]
gi|421632625|ref|ZP_16073273.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-13]
gi|421644563|ref|ZP_16085041.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-235]
gi|421646324|ref|ZP_16086776.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-251]
gi|421652335|ref|ZP_16092694.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC0162]
gi|421654307|ref|ZP_16094637.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-72]
gi|421657285|ref|ZP_16097558.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-83]
gi|421661648|ref|ZP_16101821.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC110]
gi|421665248|ref|ZP_16105370.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC087]
gi|421672478|ref|ZP_16112434.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC099]
gi|421674167|ref|ZP_16114102.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC065]
gi|421679164|ref|ZP_16119043.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC111]
gi|421686917|ref|ZP_16126654.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-143]
gi|421690662|ref|ZP_16130330.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-116]
gi|421696636|ref|ZP_16136218.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-692]
gi|421700351|ref|ZP_16139868.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-58]
gi|421703022|ref|ZP_16142490.1| clpB [Acinetobacter baumannii ZWS1122]
gi|421706742|ref|ZP_16146146.1| clpB [Acinetobacter baumannii ZWS1219]
gi|421790248|ref|ZP_16226474.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-82]
gi|421790785|ref|ZP_16226979.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-2]
gi|421798163|ref|ZP_16234191.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-21]
gi|421800821|ref|ZP_16236790.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Canada BC1]
gi|421804761|ref|ZP_16240664.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-A-694]
gi|421806445|ref|ZP_16242309.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC035]
gi|424052980|ref|ZP_17790512.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab11111]
gi|424060511|ref|ZP_17798002.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab33333]
gi|424064469|ref|ZP_17801954.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab44444]
gi|425747416|ref|ZP_18865424.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-348]
gi|425754539|ref|ZP_18872400.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-113]
gi|445408747|ref|ZP_21432647.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-57]
gi|445452387|ref|ZP_21444918.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-A-92]
gi|445459136|ref|ZP_21447476.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC047]
gi|445467392|ref|ZP_21450716.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC338]
gi|445476784|ref|ZP_21453971.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-78]
gi|445486448|ref|ZP_21457452.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
AA-014]
gi|169149532|emb|CAM87421.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter baumannii AYE]
gi|183209079|gb|ACC56477.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
baumannii ACICU]
gi|193076896|gb|ABO11616.2| ATP-dependent protease Hsp 100 [Acinetobacter baumannii ATCC 17978]
gi|213055442|gb|ACJ40344.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB0057]
gi|213987437|gb|ACJ57736.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB307-0294]
gi|260409179|gb|EEX02482.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|322507800|gb|ADX03254.1| clpB [Acinetobacter baumannii 1656-2]
gi|323517400|gb|ADX91781.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
baumannii TCDC-AB0715]
gi|332728578|gb|EGJ59950.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6013150]
gi|332733409|gb|EGJ64592.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6013113]
gi|332739338|gb|EGJ70194.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
6014059]
gi|333364933|gb|EGK46947.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
baumannii AB210]
gi|342230540|gb|EGT95373.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH1]
gi|342232941|gb|EGT97704.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH2]
gi|342235364|gb|EGT99968.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH4]
gi|347593063|gb|AEP05784.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter baumannii
MDR-ZJ06]
gi|385879041|gb|AFI96136.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii MDR-TJ]
gi|395525137|gb|EJG13226.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC137]
gi|395554588|gb|EJG20590.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC189]
gi|395557541|gb|EJG23542.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC143]
gi|395565145|gb|EJG26793.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC109]
gi|395568257|gb|EJG28931.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-17]
gi|398325140|gb|EJN41327.1| ATP-dependent protease [Acinetobacter baumannii AC12]
gi|400207621|gb|EJO38591.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Canada BC-5]
gi|400212877|gb|EJO43836.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-123]
gi|400381857|gb|EJP40535.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC032]
gi|400386004|gb|EJP49079.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-18]
gi|400392441|gb|EJP59487.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-81]
gi|404561397|gb|EKA66632.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-692]
gi|404564040|gb|EKA69232.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-116]
gi|404566527|gb|EKA71670.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-143]
gi|404570733|gb|EKA75806.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-58]
gi|404668463|gb|EKB36372.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab33333]
gi|404671058|gb|EKB38927.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab11111]
gi|404673205|gb|EKB41004.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab44444]
gi|407193008|gb|EKE64180.1| clpB [Acinetobacter baumannii ZWS1122]
gi|407193360|gb|EKE64526.1| clpB [Acinetobacter baumannii ZWS1219]
gi|407900805|gb|AFU37636.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii TYTH-1]
gi|408504704|gb|EKK06439.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-235]
gi|408505461|gb|EKK07182.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC0162]
gi|408511074|gb|EKK12728.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-72]
gi|408517711|gb|EKK19249.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
IS-251]
gi|408697909|gb|EKL43411.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC074]
gi|408698708|gb|EKL44196.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC098]
gi|408706349|gb|EKL51671.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC180]
gi|408708733|gb|EKL54003.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-13]
gi|408713861|gb|EKL59017.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-83]
gi|408715654|gb|EKL60779.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC110]
gi|409985317|gb|EKO41539.1| ATP-dependent protease [Acinetobacter baumannii AC30]
gi|410379109|gb|EKP31716.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC099]
gi|410384928|gb|EKP37426.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC065]
gi|410390712|gb|EKP43094.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC087]
gi|410391656|gb|EKP44023.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC111]
gi|410395066|gb|EKP47381.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-21]
gi|410395333|gb|EKP47639.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-82]
gi|410404813|gb|EKP56871.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-2]
gi|410406692|gb|EKP58695.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Canada BC1]
gi|410410778|gb|EKP62670.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-A-694]
gi|410417789|gb|EKP69557.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC035]
gi|425493990|gb|EKU60212.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-348]
gi|425496768|gb|EKU62885.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-113]
gi|444754396|gb|ELW79013.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-A-92]
gi|444769521|gb|ELW93699.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
AA-014]
gi|444774489|gb|ELW98571.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC047]
gi|444776558|gb|ELX00599.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC338]
gi|444777310|gb|ELX01341.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-78]
gi|444780683|gb|ELX04619.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
Naval-57]
gi|452951611|gb|EME57057.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii MSP4-16]
Length = 859
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/694 (59%), Positives = 555/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL N+ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I ++E +Y +LE++WK EKTL++ ++Q + E++K R+ K
Sbjct: 426 VKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 486 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLL++E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMMQGEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 721 QDVRELGEGATDDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDR 779
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + +A + + GFD +YGAR
Sbjct: 780 LRSRLVDRDMSLTVDDSAFDLLIDAGFDPVYGAR 813
>gi|330831466|ref|YP_004394418.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Aeromonas
veronii B565]
gi|423211882|ref|ZP_17198415.1| chaperone ClpB [Aeromonas veronii AER397]
gi|328806602|gb|AEB51801.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Aeromonas
veronii B565]
gi|404612683|gb|EKB09741.1| chaperone ClpB [Aeromonas veronii AER397]
Length = 857
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/677 (59%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
GK + EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGKKVEDANAEENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 DLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI + + +Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG
Sbjct: 445 NQEIGEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 RIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M+ + FRPEFINRID+ +VF L ++I SIA IQL L +L ++++S+A
Sbjct: 739 AMLMDVLTRSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMGRLEAQGYEVEVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
L+K+ + GFD +YGAR
Sbjct: 799 LLEKLVHAGFDPVYGAR 815
>gi|432802779|ref|ZP_20036748.1| chaperone ClpB [Escherichia coli KTE84]
gi|431347921|gb|ELG34798.1| chaperone ClpB [Escherichia coli KTE84]
Length = 857
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK++S G+D +YGAR
Sbjct: 799 ALKQLSENGYDPVYGAR 815
>gi|389839942|ref|YP_006342026.1| protein disaggregation chaperone ClpB [Cronobacter sakazakii ES15]
gi|387850418|gb|AFJ98515.1| protein disaggregation chaperone ClpB [Cronobacter sakazakii ES15]
Length = 857
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 537/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE++L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKLLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +K+I SIA IQL L +L + IS
Sbjct: 739 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAVHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 799 ALQLLGENGYDPVYGAR 815
>gi|429087804|ref|ZP_19150536.1| ClpB protein [Cronobacter universalis NCTC 9529]
gi|426507607|emb|CCK15648.1| ClpB protein [Cronobacter universalis NCTC 9529]
Length = 857
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 537/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +++I SIA IQL L +L + IS
Sbjct: 739 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAVHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 799 ALQLLGENGYDPVYGAR 815
>gi|344199838|ref|YP_004784164.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
gi|343775282|gb|AEM47838.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
Length = 866
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 550/677 (81%), Gaps = 2/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L+KYT+D TE+A GKLDPVIGRDDEIRR IQVL RRSKNNPVL
Sbjct: 145 GGEKINDVNAEEQRQALEKYTVDYTERASQGKLDPVIGRDDEIRRTIQVLLRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLA R+INGEVP SL K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLALRLINGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERLKSLLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++ ++ II+FIDE+H ++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR++IE
Sbjct: 265 DLEKSEGKIILFIDEIHMLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRKHIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQ++LV+EP +E+TI+ILRGL+++YE HHGV ITDPA+VAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQRVLVDEPSVEDTIAILRGLKERYEAHHGVRITDPALVAAAQLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++IK+EIDSKP+ +D+LERR+IQL IE A+++E DE+S+KRL ++
Sbjct: 385 NLPDKAIDLMDEAASRIKMEIDSKPQELDELERRIIQLNIERVALEKEKDEASRKRLGIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I++L KY LE++WK EK I+ + QI++E+++ R++++ A R +D + +++L+Y
Sbjct: 445 QTQISELGRKYQELEEVWKGEKLAIEGTSQIQKELDRKRVELDTARRANDLERMAELQYS 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE L+ ++ + + K TLL+T+VG EEIAE+V+R TGIPVSK+++ E+EK
Sbjct: 505 SIPALEAQLR-NAEIHAESAGSGAKPTLLRTEVGEEEIAEVVARWTGIPVSKMLEGEKEK 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQ EA++AVSNAIRRSR+GLSD +RP GSF+FLGPTGVGKTEL K L
Sbjct: 564 LLKMEERLQARVVGQSEAVAAVSNAIRRSRAGLSDPRRPNGSFLFLGPTGVGKTELSKAL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ ++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 624 AEFLFDSEDHLVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E KGD + ++
Sbjct: 684 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEFGRKGDYDGMR 743
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+AVM+ V+ +FRPEF+NRID++++F L + I IQ+ L+ +L + +M L +S
Sbjct: 744 VAVMDVVQDHFRPEFLNRIDELVIFHPLTAVQLREITEIQMGFLRARLRERDMGLVLSDG 803
Query: 670 ALKKISNIGFDLIYGAR 686
AL +++ +G+D YGAR
Sbjct: 804 ALDRLAEVGYDPAYGAR 820
>gi|392307907|ref|ZP_10270441.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Pseudoalteromonas citrea
NCIMB 1889]
Length = 857
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 537/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + EE L+KYT+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVDNPNAEETRQALEKYTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGQVILFIDEIHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVSEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPEQLDKLERRIIQLKLEDNALAKEKDEASQKRRAEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ IN+LE +Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG
Sbjct: 445 QALINELEGEYRELDEVWNAEKASLQGTQVIKAELEQSRLDLEVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + LLK +VG +EIAEI+SR TGIPV+K++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMNLLKNQVGEDEIAEILSRWTGIPVAKMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +V+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLAMEDELHNKVIGQDEAVHAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 AHFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD ++E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIVQEQASNNDYAGLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM + FRPEFINRID+ +VF L ++I IA+IQL+ L +L + ++
Sbjct: 739 ERVMGVLATQFRPEFINRIDETVVFHPLVTEHIKEIASIQLDKLTTRLHEKGFQFGLTSD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+KI+ GFD ++GAR
Sbjct: 799 ALEKIAQSGFDPVFGAR 815
>gi|423198677|ref|ZP_17185260.1| chaperone ClpB [Aeromonas hydrophila SSU]
gi|404629867|gb|EKB26592.1| chaperone ClpB [Aeromonas hydrophila SSU]
Length = 857
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
GK + EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGKKVEDANAEENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 265 DLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI + + +Y LE++WK EK + +Q IK +E+ R ++ A R D +S+L+YG
Sbjct: 445 NQEIGEKDREYNELEEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ +V EIA++++R TGIPV+++++ EREK
Sbjct: 505 RIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDQLHSRVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYNEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M + FRPEFINRID+ +VF L ++I SIA IQL L ++L ++++S+A
Sbjct: 739 AMLMEVLARSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMSRLEAQGYEVEVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
L K+ + GFD +YGAR
Sbjct: 799 LLNKLVHAGFDPVYGAR 815
>gi|406675303|ref|ZP_11082492.1| chaperone ClpB [Aeromonas veronii AMC35]
gi|404627635|gb|EKB24435.1| chaperone ClpB [Aeromonas veronii AMC35]
Length = 857
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/677 (59%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
GK + EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGKKVADANAEENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 DLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI + + +Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG
Sbjct: 445 NQEIGEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 RIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M+ + FRPEFINRID+ +VF L +I SIA IQL L +L ++++S+A
Sbjct: 739 TMLMDVLTRSFRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEVEVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
L+K+ + GFD +YGAR
Sbjct: 799 LLEKLVHAGFDPVYGAR 815
>gi|170718829|ref|YP_001783422.1| ATPase [Haemophilus somnus 2336]
gi|168826958|gb|ACA32329.1| ATPase AAA-2 domain protein [Haemophilus somnus 2336]
Length = 856
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE+ L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGEKVNEQGAEENRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E DE+S+KRL L+
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDEASRKRLDLL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +YA LE +WK EK + +Q IK E++ ++++ +A R SD+ +S+L+YG
Sbjct: 445 EEELGEKEREYAELEDVWKAEKAALSGAQHIKAELDNAKIQMEQARRISDFAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + + + TLL+ +V EEIAE++SR TGIPV+K+++ E++K
Sbjct: 505 RIPELEKQLAQAESAE------GKEMTLLRNRVTDEEIAEVLSRATGIPVAKMMEGEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRVVGQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQELHKRVVGQSEAVVAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ D +K
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKELDYNAMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA IQL L ++ L+ + A
Sbjct: 739 VVMSVVGQHFRPEFINRIDETVVFHPLAKENIRAIATIQLQRLVKRMETHGYQLEFTDAT 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D+IYGAR
Sbjct: 799 LDFIGEVGYDVIYGAR 814
>gi|365971689|ref|YP_004953250.1| chaperone protein ClpB [Enterobacter cloacae EcWSU1]
gi|365750602|gb|AEW74829.1| Chaperone protein ClpB [Enterobacter cloacae EcWSU1]
Length = 861
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/709 (58%), Positives = 558/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ Q +I + LL+ KV EEIAE+++R TGIPV+++++ ER+K
Sbjct: 509 KIPELEK------QLEIATQSEGKTMRLLRNKVTDEEIAEVLARWTGIPVARMMESERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 743 DLVMGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDD 802
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 803 ALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 843
>gi|50122267|ref|YP_051434.1| protein disaggregation chaperone [Pectobacterium atrosepticum
SCRI1043]
gi|49612793|emb|CAG76243.1| ClpB protein (heat shock protein f84.1) [Pectobacterium
atrosepticum SCRI1043]
Length = 858
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/720 (57%), Positives = 566/720 (78%), Gaps = 18/720 (2%)
Query: 2 GIKNNSLNVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVL 60
G+ N V G + ++ Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVL
Sbjct: 135 GVTNAIDQVRGGDQVNDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVL 194
Query: 61 QRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGE 120
QRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGE
Sbjct: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGE 254
Query: 121 FEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGAT 180
FE+RLK +L ++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GAT
Sbjct: 255 FEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGAT 314
Query: 181 TLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAAS 240
TL+EYRQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+
Sbjct: 315 TLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAA 374
Query: 241 ELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYD 300
LS+RYISDR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D
Sbjct: 375 MLSHRYISDRKLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESD 434
Query: 301 ESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSD 360
E+S+KRL L+ E+++ E +Y+ ++ WK EK + +Q IK +E+ ++ + +A R+ D
Sbjct: 435 EASQKRLELLSTELDQKEREYSRQDEEWKAEKASLTGTQNIKASLEQAKISLEQARRQGD 494
Query: 361 WQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 420
+S+L+YG++ +LE+ L +Q++ LL+ +V EIA++++R TGIPV
Sbjct: 495 LGRMSELQYGKIPELEKQLAAATQQE------GKTVHLLRNRVTDVEIADVLARWTGIPV 548
Query: 421 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 480
S++++ E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTG
Sbjct: 549 SRMLEGEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTG 608
Query: 481 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 540
VGKTELCKTL+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR
Sbjct: 609 VGKTELCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668
Query: 541 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 600
+PYS+ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E
Sbjct: 669 RPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE- 727
Query: 601 EKGDKEIIKL--AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 658
G++ ++ V++ V FRPEFINRID+++VF L R +I SIA IQL L +L
Sbjct: 728 RFGERSYTEMRDMVLDVVSHSFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLE 787
Query: 659 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
+ + I+ AAL + +GFD +YGAR + K+++ L+ ++P A I G+LI
Sbjct: 788 ERGYSVTITDAALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGELI 839
>gi|423204378|ref|ZP_17190934.1| chaperone ClpB [Aeromonas veronii AMC34]
gi|404627243|gb|EKB24048.1| chaperone ClpB [Aeromonas veronii AMC34]
Length = 857
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
GK + EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGKKVEDANAEENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 265 DLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI + + +Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG
Sbjct: 445 NQEIGEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 RIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M+ + FRPEFINRID+ +VF L ++I SIA IQL L +L ++++S+A
Sbjct: 739 AMLMDVLTRSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMGRLEAQGYEVEVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
L+K+ + GFD +YGAR
Sbjct: 799 LLEKLVHAGFDPVYGAR 815
>gi|340000316|ref|YP_004731200.1| ClpB protein [Salmonella bongori NCTC 12419]
gi|339513678|emb|CCC31433.1| ClpB protein (heat shock protein f84.1) [Salmonella bongori NCTC
12419]
Length = 857
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+N E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELNDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIARIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|421450965|ref|ZP_15900333.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|396064558|gb|EJI72943.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
Length = 857
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLAML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|423203218|ref|ZP_17189796.1| chaperone ClpB [Aeromonas veronii AER39]
gi|404613447|gb|EKB10469.1| chaperone ClpB [Aeromonas veronii AER39]
Length = 857
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/677 (59%), Positives = 546/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
GK + EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGKKVEDANAEENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 DLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI + + +Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG
Sbjct: 445 NQEIGEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 RIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M+ + FRPEFINRID+ +VF L +I SIA IQL L +L ++++S+A
Sbjct: 739 AMLMDVLTRSFRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEVEVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
L+K+ + GFD +YGAR
Sbjct: 799 LLEKLVHAGFDPVYGAR 815
>gi|296104261|ref|YP_003614407.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|392980273|ref|YP_006478861.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
dissolvens SDM]
gi|295058720|gb|ADF63458.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|392326206|gb|AFM61159.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 857
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ Q +I + LL+ KV EIAE+++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 739 DLVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|113460345|ref|YP_718406.1| ATP-dependent Clp protease subunit B [Haemophilus somnus 129PT]
gi|112822388|gb|ABI24477.1| ATP-dependent Clp protease, subunit B [Haemophilus somnus 129PT]
Length = 856
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/676 (60%), Positives = 546/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE+ L+KYTIDLT +A GKLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 GGEKVNEQGAEENRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERLKAVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E DE+S+KRL L+
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDEASRKRLDLL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +YA LE +WK EK + +Q IK E++ ++++ +A R SD+ +S+L+YG
Sbjct: 445 EEELGEKEREYAELEDVWKAEKAALSGAQHIKAELDNAKIQMEQARRISDFAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + + + TLL+ +V EEIAE++SR TGIPV+K+++ E++K
Sbjct: 505 RIPELEKQLAQAESAE------GKEMTLLRNRVTDEEIAEVLSRATGIPVAKMMEGEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRVVGQ EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQELHKRVVGQSEAVVAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ ++ D +K
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKELDYNAMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM+ V +FRPEFINRID+ +VF L ++NI +IA IQL L ++ L+ + A
Sbjct: 739 IVMSVVGQHFRPEFINRIDETVVFHPLAKENIRAIATIQLQRLVKRMETHGYQLEFTDAT 798
Query: 671 LKKISNIGFDLIYGAR 686
L I +G+D+IYGAR
Sbjct: 799 LDFIGEVGYDVIYGAR 814
>gi|384085053|ref|ZP_09996228.1| clpB protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 865
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/677 (59%), Positives = 550/677 (81%), Gaps = 3/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L+KYT D TE+AR GKLDPVIGRDDEIRR IQVL RRSKNNPVL
Sbjct: 145 GGEKINDANAEEQRQALEKYTTDYTERARQGKLDPVIGRDDEIRRTIQVLLRRSKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLA R++NGEVP SL K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLALRMVNGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERLKALLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++ ++ II+FIDE+HT++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYR+YIE
Sbjct: 265 DLEKSEGKIILFIDEIHTLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQ++LV+EP +E++I+ILRGL+++YE HHGV ITDPA+VAA++LS+RYI DR
Sbjct: 325 KDAALERRFQRVLVDEPSVEDSIAILRGLKERYEAHHGVRITDPALVAAAQLSHRYIPDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAA++IK+EIDSKP+ +D+LERR+IQL IE A+++E DE+S KRL ++
Sbjct: 385 NLPDKAIDLMDEAASRIKMEIDSKPQELDELERRIIQLNIERVALEKEKDEASLKRLDIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I L+ KY +LE++WK EK I+ + QI++E+++ R+ ++ A R +D + +++L+Y
Sbjct: 445 QSQIKDLDKKYQDLEEVWKGEKLTIEGTSQIQKELDRKRVDLDTARRANDLERMAELQYS 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE +K + K TLL+T+VG EEIAE+V+R TGIPVSK+++ E+EK
Sbjct: 505 VIPALEAQIKAAETQGEG--AKQTKLTLLRTEVGEEEIAEVVARWTGIPVSKMLEGEKEK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQ EA++AV+NAIRRSR+GLSD +RP GSF+FLGPTGVGKTEL K L
Sbjct: 563 LLKMEERLQARVVGQSEAVAAVANAIRRSRAGLSDPRRPNGSFLFLGPTGVGKTELTKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 623 AEFLFDSEDLLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIK 609
+EKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E + G+ + ++
Sbjct: 683 VEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEFSRSGNYDAMR 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+AVM+ V+ +FRPEF+NRID++++F L + I ++Q+ L+ +L + +MDL +S+
Sbjct: 743 VAVMDVVQDHFRPEFLNRIDEMVIFHPLTAVQLREITSLQMGALRARLKERDMDLLLSEG 802
Query: 670 ALKKISNIGFDLIYGAR 686
AL +++ +G+D +YGAR
Sbjct: 803 ALDRLAEVGYDPVYGAR 819
>gi|339495683|ref|YP_004715976.1| ClpB protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338803055|gb|AEJ06887.1| ClpB protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 854
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/666 (62%), Positives = 545/666 (81%), Gaps = 7/666 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
EE L KYT+D+T++A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
IVEGLAQRI+NGEVP+ L K++L LD+ L+AG K+RGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVI 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LV+EP E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS RYI+DR +PDKAIDLI
Sbjct: 335 KVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSQRYITDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KKRL ++ +I KLE +
Sbjct: 395 DEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLEKE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y++LE+IWK EK ++ S QI+++IE+ + + A RK D +++L+YG + LER L+
Sbjct: 455 YSDLEEIWKSEKAEVQGSAQIQQKIEQAKADLEAARRKGDLARMAELQYGIIPDLERSLE 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q + + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+KLL +E++L
Sbjct: 515 MVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHT 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQ EA+ AV+NA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L+ +F+ EE+
Sbjct: 569 RVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++L+DE+EKA+ DVFN
Sbjct: 629 MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYF 620
+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+ GD + + AVM+ V +F
Sbjct: 689 VLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDPDAQRAAVMDAVAHHF 747
Query: 621 RPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFD 680
RPEFINRID+++VF L R+ I IA IQL L+ +L + + L++S+ A+ K+ +G+D
Sbjct: 748 RPEFINRIDEVVVFDPLGREQIAGIAEIQLGRLRKRLAERELSLELSQEAMDKLIAVGYD 807
Query: 681 LIYGAR 686
+YGAR
Sbjct: 808 PVYGAR 813
>gi|156932865|ref|YP_001436781.1| protein disaggregation chaperone [Cronobacter sakazakii ATCC
BAA-894]
gi|156531119|gb|ABU75945.1| hypothetical protein ESA_00662 [Cronobacter sakazakii ATCC BAA-894]
Length = 861
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 536/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGETVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 509 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +K+I SIA IQL L +L + IS
Sbjct: 743 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAVHISDD 802
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 803 ALQLLGENGYDPVYGAR 819
>gi|88857985|ref|ZP_01132627.1| ATP-dependent protease, Hsp 100 [Pseudoalteromonas tunicata D2]
gi|88819602|gb|EAR29415.1| ATP-dependent protease, Hsp 100 [Pseudoalteromonas tunicata D2]
Length = 860
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/677 (61%), Positives = 539/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+KYT+DLTE+A LGKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVEDASAEDSRQSLEKYTVDLTERAELGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKDKRVLSLDLGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HT++G GK +G++DAGNMLKP LSRGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGRVILFIDEIHTIVGAGKSDGAMDAGNMLKPALSRGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVEEPTVEDTIAILRGLKERYELHHSVEITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + ++++IDSKPE++DKLER++IQLK+E A+ +E DE+S +R I
Sbjct: 385 QLPDKAIDLIDEAGSSLRMQIDSKPEVLDKLERKIIQLKLEDNALAKEKDEASLQRQQDI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
K++I L+ +Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG
Sbjct: 445 KQQILVLDKQYNELDEVWIAEKASLQGTQVIKTELEQARLDLEIARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q LL+ KVG EIAEI+SR TGIPV+K++Q ER K
Sbjct: 505 RIPELERKLDLASQVEMQ------DMRLLRNKVGENEIAEILSRWTGIPVTKMLQGERSK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +V+GQDEA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLKMEENLHTQVIGQDEAVTAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ATFLFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E D E +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDVIQEHAVNSDYERLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M+ + FRPEFINRIDD +VF L+ ++I IA+IQL LK +L+ ++++
Sbjct: 739 AMLMDVLTTQFRPEFINRIDDTVVFHPLSTEHIKHIADIQLAKLKQRLVDNGYTMRLTDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL +++ GFD ++GAR
Sbjct: 799 ALSQLALAGFDPVFGAR 815
>gi|378985221|ref|YP_005248377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|312913650|dbj|BAJ37624.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
Length = 857
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LDI L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDIGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|378446075|ref|YP_005233707.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|261247854|emb|CBG25683.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
Length = 857
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|417286004|ref|ZP_12073295.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07793]
gi|386251245|gb|EII97412.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07793]
Length = 857
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q EE LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEEQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|242240264|ref|YP_002988445.1| protein disaggregation chaperone [Dickeya dadantii Ech703]
gi|242132321|gb|ACS86623.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech703]
Length = 857
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/718 (57%), Positives = 561/718 (78%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEQVNEQSAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAQPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDDASLKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK +E+ +L + +A R+ D +S+L+YG
Sbjct: 445 NAELEQKEREYSKLEEEWKAEKASLTGTQNIKAALEQAKLALEQARRQGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKELAAANQVE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E + +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQEMHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AAFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ GD ++
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQD-RFGDMNYGQM 737
Query: 611 --AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
V+N V +FRPEFINRID+++VF L R +I SIA IQL L +L + + IS
Sbjct: 738 RDMVLNVVSHHFRPEFINRIDEVVVFHPLARNHIASIAQIQLQRLYKRLEERGYSVSISD 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AAL+ + GFD +YGAR + K+++ ++ ++P A I G+L+ P LD
Sbjct: 798 AALELLGKSGFDPVYGARPL---KRAIQQMI-----ENPLAQRILSGELLPGKPIVLD 847
>gi|169633163|ref|YP_001706899.1| ATP-dependent protease [Acinetobacter baumannii SDF]
gi|169151955|emb|CAP00815.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter baumannii]
Length = 859
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/694 (59%), Positives = 555/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL N+ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I ++E +Y +LE++WK EKTL++ ++Q + E++K R+ K
Sbjct: 426 VKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 486 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLL++E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMMQGEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 721 QDVRELGEGATDDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKVQIRGIADIQLDR 779
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + +A + + GFD +YGAR
Sbjct: 780 LRSRLVDRDMSLTVDDSAFDLLIDAGFDPVYGAR 813
>gi|126641234|ref|YP_001084218.1| ATP-dependent protease Hsp 100 [Acinetobacter baumannii ATCC 17978]
Length = 838
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/694 (59%), Positives = 555/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL N+ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 105 VGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIR 164
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 165 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAG 224
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 225 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 284
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 285 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 344
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 345 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 404
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I ++E +Y +LE++WK EKTL++ ++Q + E++K R+ K
Sbjct: 405 VKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEK 464
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 465 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 519
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLL++E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 520 ATGIPVAKMMQGEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 579
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 580 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 639
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 640 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 699
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 700 QDVRELGEGATDDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDR 758
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + +A + + GFD +YGAR
Sbjct: 759 LRSRLVDRDMSLTVDDSAFDLLIDAGFDPVYGAR 792
>gi|300718033|ref|YP_003742836.1| Chaperone protein [Erwinia billingiae Eb661]
gi|299063869|emb|CAX60989.1| Chaperone protein [Erwinia billingiae Eb661]
Length = 857
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 539/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGAEDQRQALKKYTIDLTERAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLSLDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQIDSKPESLDRLERRIIQLKLEQQALKKETDDASIKRLSML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E Y+ LE+ WK EK + +Q IK E+E+ +L + +A R D +S+L+YG
Sbjct: 445 EDELNQKERDYSELEEEWKSEKASLSGTQTIKAELEQAKLAMEQARRLGDLAQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIA++++R TGIPV ++++ ER+K
Sbjct: 505 KIPELEKQLALATQ------SEGKTMRLLRNRVTEVEIADVLARWTGIPVDRMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++R+DMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRLDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALSYPEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINRID+++VF L ++I SIA IQL L ++L DL IS A
Sbjct: 739 DVVMTVVGQHFRPEFINRIDELVVFHPLGEQHIASIAKIQLQRLYDRLADRGYDLHISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL K++ G+D +YGAR
Sbjct: 799 ALHKLAENGYDPVYGAR 815
>gi|308048519|ref|YP_003912085.1| ATP-dependent chaperone ClpB [Ferrimonas balearica DSM 9799]
gi|307630709|gb|ADN75011.1| ATP-dependent chaperone ClpB [Ferrimonas balearica DSM 9799]
Length = 857
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/706 (59%), Positives = 547/706 (77%), Gaps = 21/706 (2%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALDKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
IVEGLAQRIINGEVP L K++L LD+ LLAG KYRGEFE+RLK +L E+S + +I
Sbjct: 215 IVEGLAQRIINGEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERLKAVLNELSKEEGRVI 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQY+EKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+S+R +PDKAIDLI
Sbjct: 335 KVLVDEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAATLSHRYLSERKLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA+ I++EIDSKPE +DKLERR+IQLK+E +A+ +E DE+S KRL L+K++++ LE +
Sbjct: 395 DEAASSIRLEIDSKPEPLDKLERRIIQLKLEEQALSKETDEASHKRLELLKEQLSDLEQQ 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
+ L++IW EK + +Q IK +E+ R + A R SD +S+L+YG + +LE+ L
Sbjct: 455 FRELDEIWNTEKAALAGTQHIKAALEQARQDLEVARRASDLNRMSELQYGRIPELEKQLD 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
+Q ++Q + TLLK +V EIAE++++ TGIPV+K+++ ER+KLL +E L +
Sbjct: 515 LAAQAEMQ------EMTLLKNRVTDAEIAEVLAKATGIPVAKMLEGERDKLLRMEEALHR 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RVVGQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F++ ++
Sbjct: 569 RVVGQDEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELSKALAHFMFDSADA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 618
ILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I++ E E+ +L V +
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDQIQQHFGELAYPELKEL-VYGVLLQ 747
Query: 619 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 678
FRPEF+NR+D+ +VF L ++ I IA IQL L+ +L + +L+IS L ++ G
Sbjct: 748 SFRPEFLNRVDETVVFHPLAQEQIAEIARIQLKGLEKRLAEKEYELRISDEVLASLATAG 807
Query: 679 FDLIYGARDVHGCKKSLSILLKKIHKK--SPEANFIFLGDLINKGP 722
FD ++GAR L + I +K +P A I G L+ P
Sbjct: 808 FDPVFGARP----------LKRAIQQKLENPLAQQILAGKLLPGQP 843
>gi|16761514|ref|NP_457131.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16765976|ref|NP_461591.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29142985|ref|NP_806327.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|167992437|ref|ZP_02573535.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168244680|ref|ZP_02669612.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194448814|ref|YP_002046666.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197265769|ref|ZP_03165843.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|213051813|ref|ZP_03344691.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213649749|ref|ZP_03379802.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850142|ref|ZP_03381040.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289824160|ref|ZP_06543755.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|374981290|ref|ZP_09722618.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378451422|ref|YP_005238782.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378700559|ref|YP_005182516.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378960787|ref|YP_005218273.1| hypothetical protein STBHUCCB_27630 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378990038|ref|YP_005253202.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379701895|ref|YP_005243623.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383497334|ref|YP_005398023.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386592406|ref|YP_006088806.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|419728971|ref|ZP_14255933.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419734207|ref|ZP_14261101.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419739788|ref|ZP_14266531.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419745026|ref|ZP_14271670.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419749085|ref|ZP_14275574.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421569097|ref|ZP_16014803.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421576391|ref|ZP_16021991.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421580578|ref|ZP_16026133.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421585217|ref|ZP_16030718.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422029085|ref|ZP_16375372.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422034033|ref|ZP_16380081.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427559032|ref|ZP_18930585.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427577459|ref|ZP_18935334.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427580449|ref|ZP_18935833.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427614308|ref|ZP_18942999.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427647668|ref|ZP_18949985.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427659054|ref|ZP_18954643.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427664422|ref|ZP_18959627.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427683412|ref|ZP_18964451.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427802802|ref|ZP_18970120.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|54035784|sp|Q7AMH5.1|CLPB_SALTI RecName: Full=Chaperone protein ClpB
gi|54035786|sp|Q7CQ01.1|CLPB_SALTY RecName: Full=Chaperone protein ClpB
gi|25289914|pir||AI0831 ClpB protein (heat shock protein f84.1) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16421207|gb|AAL21550.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16503815|emb|CAD05840.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138617|gb|AAO70187.1| ClpB protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|194407118|gb|ACF67337.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197244024|gb|EDY26644.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205329269|gb|EDZ16033.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205336469|gb|EDZ23233.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|267994801|gb|ACY89686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159207|emb|CBW18722.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|321223454|gb|EFX48519.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323130994|gb|ADX18424.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332989585|gb|AEF08568.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|374354659|gb|AEZ46420.1| hypothetical protein STBHUCCB_27630 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|380464155|gb|AFD59558.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381297674|gb|EIC38761.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381298111|gb|EIC39193.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381298283|gb|EIC39363.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381306782|gb|EIC47652.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381312527|gb|EIC53325.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383799450|gb|AFH46532.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|402518796|gb|EJW26167.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402519783|gb|EJW27143.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402528382|gb|EJW35638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402530399|gb|EJW37619.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414010482|gb|EKS94492.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414010674|gb|EKS94670.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414011341|gb|EKS95305.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414025628|gb|EKT08946.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414035015|gb|EKT17919.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414038868|gb|EKT21570.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414039633|gb|EKT22303.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414040024|gb|EKT22662.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414044093|gb|EKT26555.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414053652|gb|EKT35638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414055415|gb|EKT37309.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 857
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|395231533|ref|ZP_10409821.1| disaggregation chaperone [Citrobacter sp. A1]
gi|424734303|ref|ZP_18162842.1| protein disaggregation chaperone [Citrobacter sp. L17]
gi|394714742|gb|EJF20646.1| disaggregation chaperone [Citrobacter sp. A1]
gi|422891883|gb|EKU31894.1| protein disaggregation chaperone [Citrobacter sp. L17]
Length = 857
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/709 (58%), Positives = 556/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKECQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 DMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|304399169|ref|ZP_07381036.1| ATP-dependent chaperone ClpB [Pantoea sp. aB]
gi|304353223|gb|EFM17603.1| ATP-dependent chaperone ClpB [Pantoea sp. aB]
Length = 857
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 538/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPGVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG
Sbjct: 445 ETELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPALEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLSYPEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NRID+++VF L K+I SIA IQL L +L + L IS
Sbjct: 739 DIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+K ++ G+D +YGAR
Sbjct: 799 AIKLLAENGYDPVYGAR 815
>gi|420374600|ref|ZP_14874564.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
gi|391316060|gb|EIQ73544.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
Length = 820
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/709 (58%), Positives = 556/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 108 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 167
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 168 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 227
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 228 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 287
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 288 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 347
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 348 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 407
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 408 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 467
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 468 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 521
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 522 LLRMEQDLHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 581
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 582 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 641
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 642 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMK 701
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 702 DMVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIATIQLQRLYKRLEERGYEIHISDE 761
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 762 ALKLLSVNGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 802
>gi|332289023|ref|YP_004419875.1| protein disaggregation chaperone [Gallibacterium anatis UMN179]
gi|330431919|gb|AEC16978.1| protein disaggregation chaperone [Gallibacterium anatis UMN179]
Length = 857
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/678 (60%), Positives = 545/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ EE L+KYTIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDAGAEETRQALQKYTIDLTARAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLRHKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ + II+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 EIAKEEGRIILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKP+ +DKLERR+IQLK+E +A+++E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPQPLDKLERRIIQLKLEQQALQKEEDDASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+KE+ + E +Y+ LE++WK EK + +Q IK E++ + K+ +A R D +S+LKY
Sbjct: 445 EKELAEKEKEYSELEEVWKSEKAALSGAQHIKAELDNAKTKMEQAYRAGDIAKMSELKYS 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L++ + + +LL+ +V EEIAE++SR TGIPV+K+++ E+EK
Sbjct: 505 TIPALEKQLEQAENAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEELHKRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E+++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDSEDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+ + GD +
Sbjct: 679 VEKAHRDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQS-QAGDLSYGEM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM+ V +FRPEFINRID+ +VF L ++NI +IA+IQL L N++ + L S+
Sbjct: 738 KELVMSVVGQHFRPEFINRIDETVVFHPLAKENIRAIASIQLQRLINRMKERGYLLHFSE 797
Query: 669 AALKKISNIGFDLIYGAR 686
AL + +G+D +YGAR
Sbjct: 798 QALDYLGQVGYDPVYGAR 815
>gi|345300451|ref|YP_004829809.1| ATP-dependent chaperone ClpB [Enterobacter asburiae LF7a]
gi|345094388|gb|AEN66024.1| ATP-dependent chaperone ClpB [Enterobacter asburiae LF7a]
Length = 857
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/709 (58%), Positives = 557/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHHRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|299770934|ref|YP_003732960.1| ATP-dependent chaperone ClpB [Acinetobacter oleivorans DR1]
gi|298701022|gb|ADI91587.1| ATP-dependent chaperone ClpB [Acinetobacter oleivorans DR1]
Length = 859
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/694 (59%), Positives = 554/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL ++ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTPDSLRKVIEHIRGSDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L SK++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+ K
Sbjct: 426 VKKDEDVGSKAEVNHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 486 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLLN+E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMMQGEREKLLNMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 721 QDVRELGEGATDDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDR 779
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + A + + GFD +YGAR
Sbjct: 780 LRSRLVDRDMSLTVDDTAFDLLIDAGFDPVYGAR 813
>gi|331658742|ref|ZP_08359684.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA206]
gi|419912524|ref|ZP_14430975.1| protein disaggregation chaperone [Escherichia coli KD1]
gi|432899701|ref|ZP_20110253.1| chaperone ClpB [Escherichia coli KTE192]
gi|433029525|ref|ZP_20217380.1| chaperone ClpB [Escherichia coli KTE109]
gi|331053324|gb|EGI25353.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA206]
gi|388391521|gb|EIL52984.1| protein disaggregation chaperone [Escherichia coli KD1]
gi|431425234|gb|ELH07305.1| chaperone ClpB [Escherichia coli KTE192]
gi|431542333|gb|ELI17504.1| chaperone ClpB [Escherichia coli KTE109]
Length = 857
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V++ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLDVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|192359582|ref|YP_001983648.1| chaperone ClpB [Cellvibrio japonicus Ueda107]
gi|190685747|gb|ACE83425.1| ClpB [Cellvibrio japonicus Ueda107]
Length = 892
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/685 (60%), Positives = 549/685 (80%), Gaps = 32/685 (4%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRRSKNNPVLIGEPGVGKTAIVEGLA
Sbjct: 169 LEKYTVDLTARAEAGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 228
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP L K++L LD+ LLAG K+RGEFE+RLK ++ E++ + II+F+DEL
Sbjct: 229 QRIVNGEVPEGLKDKRLLALDLGALLAGAKFRGEFEERLKSVINELAKQEGRIILFVDEL 288
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+EKDAA ERRFQK+LV+E
Sbjct: 289 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQKVLVDE 348
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR +PDKAIDLIDEAA++
Sbjct: 349 PGEEDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLIDEAASR 408
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDSKPE MD+LERRLIQLKIE EA+K++ DE+SKKRL I ++I+K+E +Y +LE+
Sbjct: 409 IRMEIDSKPEEMDRLERRLIQLKIEREAVKKDEDEASKKRLAKIDQDIDKIEREYGDLEE 468
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IW+ EK ++ S +IK ++E+ RL++ + RK D +S+L+YG + +LE+ L SQ +
Sbjct: 469 IWRAEKAALQGSHEIKSQLEQARLELEEKRRKGDLARMSELQYGIIPQLEKQLDMASQAE 528
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ + LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E L KRV+GQ
Sbjct: 529 MM------EMKLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEEALHKRVIGQH 582
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ AVSNA+RR+R+GLSDA RP GSF+FLGPTGVGKTELCK L+ +F+ ++++RIDM
Sbjct: 583 EAVVAVSNAVRRARAGLSDANRPNGSFLFLGPTGVGKTELCKALAEFLFDTSDAMVRIDM 642
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 643 SEFMEKHSVARLIGAPPGYVGYEEGGYLTESVRRKPYSVVLLDEVEKAHPDVFNILLQVL 702
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI------------------- 607
+DGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ + DK
Sbjct: 703 EDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELAE-DKSFDTVNFDFGVTDSMNSSLNN 761
Query: 608 ------IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 661
+K AVM V +FRPEFINRID+++VF L R+ I IA+IQL L+ +L + +
Sbjct: 762 ENRYNAMKDAVMEVVAGHFRPEFINRIDEVVVFHPLGREQIRGIADIQLAQLRKRLAERD 821
Query: 662 MDLKISKAALKKISNIGFDLIYGAR 686
+ L++ A +++++++GFD +YGAR
Sbjct: 822 LGLELDAAVMERLASVGFDPVYGAR 846
>gi|291086328|ref|ZP_06355437.2| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
29220]
gi|291068913|gb|EFE07022.1| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
29220]
Length = 861
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 509 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 743 DMVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSANGYDPVYGAR 819
>gi|422369617|ref|ZP_16450017.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 16-3]
gi|315298640|gb|EFU57895.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 16-3]
Length = 861
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 509 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V++ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 743 ELVLDVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSENGYDPVYGAR 819
>gi|417541083|ref|ZP_12192911.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|353661451|gb|EHD00773.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
Length = 820
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 108 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 167
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 168 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 227
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 228 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 287
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 288 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 347
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 348 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 407
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 408 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 467
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 468 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREK 521
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 522 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 581
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 582 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 641
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 642 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 701
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 702 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 761
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 762 ALKLLSANGYDPVYGAR 778
>gi|237729507|ref|ZP_04559988.1| disaggregation chaperone [Citrobacter sp. 30_2]
gi|226908113|gb|EEH94031.1| disaggregation chaperone [Citrobacter sp. 30_2]
Length = 861
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/709 (58%), Positives = 556/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 509 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 743 DMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 802
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 803 ALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 843
>gi|424800712|ref|ZP_18226254.1| ClpB protein [Cronobacter sakazakii 696]
gi|429120813|ref|ZP_19181474.1| ClpB protein [Cronobacter sakazakii 680]
gi|423236433|emb|CCK08124.1| ClpB protein [Cronobacter sakazakii 696]
gi|426324731|emb|CCK12211.1| ClpB protein [Cronobacter sakazakii 680]
Length = 857
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 536/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +K+I SIA IQL L +L + IS
Sbjct: 739 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAVHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 799 ALQLLGENGYDPVYGAR 815
>gi|390437342|ref|ZP_10225880.1| protein disaggregation chaperone [Pantoea agglomerans IG1]
Length = 857
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 537/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG
Sbjct: 445 ETELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPALEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLSYPEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NRID+++VF L K+I SIA IQL L +L + L IS
Sbjct: 739 DIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+K ++ G+D +YGAR
Sbjct: 799 AIKLLAENGYDPVYGAR 815
>gi|442611509|ref|ZP_21026215.1| ClpB protein [Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441747437|emb|CCQ12277.1| ClpB protein [Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 857
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 539/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVNDPNAEETRQALEKFTVDLTERAIQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR YIE
Sbjct: 265 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEYRHYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVSEPSVEDTIAILRGLKERYELHHSVQITDPAIVAAAHLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E A+ +E DE+S+KR +
Sbjct: 385 QLPDKAIDLIDEAGSSIRLQIDSKPEPLDKLERRIIQLKLEDNALAKEKDEASRKRRDEM 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ I++LE +Y L+++W EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG
Sbjct: 445 QALISELEAEYKELDEVWNAEKASLQGTQAIKAELEQARLDMEVARRASDLQRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L SQ ++Q + +LL+ +V +EIAEI+SR TGIPVSK++Q EREK
Sbjct: 505 RIPELERKLDLASQAEMQ------EMSLLRNQVSEDEIAEILSRWTGIPVSKMLQGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L K+V+GQDEA+ AV+NAIRRSR+GL+D RP GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLQMEDELHKKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ASFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAQNNDYKTLK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM + FRPEFINRID+ +VF L ++I IA IQL L+ +L + ++S
Sbjct: 739 EKVMTVLTTQFRPEFINRIDETVVFHPLITEHIKHIAKIQLTRLEKRLTEKGFKFELSDG 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL KI+ GFD ++GAR
Sbjct: 799 ALDKIAASGFDPVFGAR 815
>gi|432466777|ref|ZP_19708864.1| chaperone ClpB [Escherichia coli KTE205]
gi|432582290|ref|ZP_19818703.1| chaperone ClpB [Escherichia coli KTE57]
gi|433073818|ref|ZP_20260468.1| chaperone ClpB [Escherichia coli KTE129]
gi|433121149|ref|ZP_20306817.1| chaperone ClpB [Escherichia coli KTE157]
gi|433184293|ref|ZP_20368537.1| chaperone ClpB [Escherichia coli KTE85]
gi|430993060|gb|ELD09419.1| chaperone ClpB [Escherichia coli KTE205]
gi|431121701|gb|ELE24580.1| chaperone ClpB [Escherichia coli KTE57]
gi|431586710|gb|ELI58097.1| chaperone ClpB [Escherichia coli KTE129]
gi|431641475|gb|ELJ09213.1| chaperone ClpB [Escherichia coli KTE157]
gi|431705027|gb|ELJ69647.1| chaperone ClpB [Escherichia coli KTE85]
Length = 857
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V++ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLDVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|372275030|ref|ZP_09511066.1| protein disaggregation chaperone [Pantoea sp. SL1_M5]
Length = 857
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 537/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG
Sbjct: 445 ETELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPALEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLSYPEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NRID+++VF L K+I SIA IQL L +L + L IS
Sbjct: 739 DIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+K ++ G+D +YGAR
Sbjct: 799 AIKLLAENGYDPVYGAR 815
>gi|375134056|ref|YP_004994706.1| ATP-dependent protease [Acinetobacter calcoaceticus PHEA-2]
gi|325121501|gb|ADY81024.1| ATP-dependent protease [Acinetobacter calcoaceticus PHEA-2]
Length = 859
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/694 (59%), Positives = 554/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL ++ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTPDSLRKVIEHIRGNDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+ K
Sbjct: 426 VKKDEDVGSKAEVTHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 486 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLLN+E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMMQGEREKLLNMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 721 QDVRELGEGATDDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDR 779
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + A + + GFD +YGAR
Sbjct: 780 LRSRLVDRDMSLTVDDTAFDLLIDAGFDPVYGAR 813
>gi|397164282|ref|ZP_10487739.1| ATP-dependent chaperone protein ClpB [Enterobacter radicincitans
DSM 16656]
gi|396094128|gb|EJI91681.1| ATP-dependent chaperone protein ClpB [Enterobacter radicincitans
DSM 16656]
Length = 857
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/710 (58%), Positives = 556/710 (78%), Gaps = 17/710 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQRALMKESDEASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NEELEDKERQYSALEEEWKAEKASLSGTQTIKAELEQAKIAMEQARRNGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ +V EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQAE------GKTMRLLRNRVTDIEIAEVLARWTGIPVSRMMEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEHDLHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E GD + +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGDLDYGHM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V FRPEFINRID+++VF L K+I +IA IQL L +L + + IS
Sbjct: 738 KELVMGVVSQSFRPEFINRIDEVVVFHPLGEKHIAAIAQIQLQRLYKRLEERGYAVTISD 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 798 EALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|432889814|ref|ZP_20102920.1| chaperone ClpB [Escherichia coli KTE165]
gi|431433011|gb|ELH14685.1| chaperone ClpB [Escherichia coli KTE165]
Length = 857
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVSDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|84393598|ref|ZP_00992351.1| ClpB protein [Vibrio splendidus 12B01]
gi|84375807|gb|EAP92701.1| ClpB protein [Vibrio splendidus 12B01]
Length = 857
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVDDPNAEDRRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLIAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+E+RQYIE
Sbjct: 265 ELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEHRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEKRLRTL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+++ E +A LE++W EK + +Q IK E+E+ R+ ++ A R D +S+L+YG
Sbjct: 445 QSELSEKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFNTLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L + +I SIA IQL LK ++ +L++
Sbjct: 739 NEVMEVVGKHFRPEFLNRVDESVVFHPLGQAHIESIAAIQLEHLKKRMEDNGYELEVLDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK IS +GFD +YGAR
Sbjct: 799 ALKLISQVGFDPVYGAR 815
>gi|432432832|ref|ZP_19675258.1| chaperone ClpB [Escherichia coli KTE187]
gi|432845561|ref|ZP_20078344.1| chaperone ClpB [Escherichia coli KTE141]
gi|433208716|ref|ZP_20392389.1| chaperone ClpB [Escherichia coli KTE97]
gi|430951678|gb|ELC70893.1| chaperone ClpB [Escherichia coli KTE187]
gi|431394006|gb|ELG77549.1| chaperone ClpB [Escherichia coli KTE141]
gi|431729349|gb|ELJ92981.1| chaperone ClpB [Escherichia coli KTE97]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRMGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|417789785|ref|ZP_12437399.1| protein disaggregation chaperone [Cronobacter sakazakii E899]
gi|429115632|ref|ZP_19176550.1| ClpB protein [Cronobacter sakazakii 701]
gi|449307191|ref|YP_007439547.1| protein disaggregation chaperone [Cronobacter sakazakii SP291]
gi|333956142|gb|EGL73831.1| protein disaggregation chaperone [Cronobacter sakazakii E899]
gi|426318761|emb|CCK02663.1| ClpB protein [Cronobacter sakazakii 701]
gi|449097224|gb|AGE85258.1| protein disaggregation chaperone [Cronobacter sakazakii SP291]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 535/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NDELADKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +K+I SIA IQL L +L + IS
Sbjct: 739 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAVHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 799 ALQLLGENGYDPVYGAR 815
>gi|421846352|ref|ZP_16279501.1| protein disaggregation chaperone [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|411772505|gb|EKS56120.1| protein disaggregation chaperone [Citrobacter freundii ATCC 8090 =
MTCC 1658]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/709 (58%), Positives = 556/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 DMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|365139798|ref|ZP_09346062.1| chaperone ClpB [Klebsiella sp. 4_1_44FAA]
gi|363654021|gb|EHL92952.1| chaperone ClpB [Klebsiella sp. 4_1_44FAA]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S
Sbjct: 739 DLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|436751232|ref|ZP_20520160.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434970226|gb|ELL62855.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
Length = 855
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|311278478|ref|YP_003940709.1| ATP-dependent chaperone ClpB [Enterobacter cloacae SCF1]
gi|308747673|gb|ADO47425.1| ATP-dependent chaperone ClpB [Enterobacter cloacae SCF1]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDSVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLSLDMGSLVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASRKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSALEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 739 DLVLGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|207858010|ref|YP_002244661.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|378956364|ref|YP_005213851.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|421360375|ref|ZP_15810657.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421361704|ref|ZP_15811961.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421369377|ref|ZP_15819552.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370962|ref|ZP_15821123.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421378529|ref|ZP_15828613.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421383159|ref|ZP_15833201.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421386614|ref|ZP_15836625.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421389951|ref|ZP_15839927.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421394229|ref|ZP_15844171.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421400925|ref|ZP_15850806.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421403251|ref|ZP_15853104.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421410027|ref|ZP_15859812.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412138|ref|ZP_15861900.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421415313|ref|ZP_15865041.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421423252|ref|ZP_15872912.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421427902|ref|ZP_15877520.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421430574|ref|ZP_15880160.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421433808|ref|ZP_15883365.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421440416|ref|ZP_15889896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421444185|ref|ZP_15893623.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|436611647|ref|ZP_20513921.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436798555|ref|ZP_20523439.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436810228|ref|ZP_20529335.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436812334|ref|ZP_20530913.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436832908|ref|ZP_20537198.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436852710|ref|ZP_20542768.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436861467|ref|ZP_20548651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436862274|ref|ZP_20549069.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436872649|ref|ZP_20555531.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436882986|ref|ZP_20561570.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436891271|ref|ZP_20565971.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436897935|ref|ZP_20570103.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436903329|ref|ZP_20573793.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436914583|ref|ZP_20579430.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436919284|ref|ZP_20582065.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436923294|ref|ZP_20585134.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436938811|ref|ZP_20593598.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436944521|ref|ZP_20596968.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436948206|ref|ZP_20598478.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436960075|ref|ZP_20604146.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436973706|ref|ZP_20610830.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436985723|ref|ZP_20615173.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436998540|ref|ZP_20620023.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437010458|ref|ZP_20624268.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437015822|ref|ZP_20625967.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437027158|ref|ZP_20630047.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437043329|ref|ZP_20636842.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437053314|ref|ZP_20642429.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437062236|ref|ZP_20647602.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437067153|ref|ZP_20650215.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078303|ref|ZP_20656000.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437085710|ref|ZP_20660261.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437096519|ref|ZP_20664876.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437115753|ref|ZP_20669509.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437118290|ref|ZP_20670257.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437132350|ref|ZP_20677874.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437140770|ref|ZP_20682744.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437148596|ref|ZP_20687651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437155766|ref|ZP_20691984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437163186|ref|ZP_20696495.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437168948|ref|ZP_20699386.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437179490|ref|ZP_20705405.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437188751|ref|ZP_20710546.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437263399|ref|ZP_20719573.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437269919|ref|ZP_20723088.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437273894|ref|ZP_20724987.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437302718|ref|ZP_20733644.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437315526|ref|ZP_20737214.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437327398|ref|ZP_20740340.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437342506|ref|ZP_20745414.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437411738|ref|ZP_20752916.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437443261|ref|ZP_20758006.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437467132|ref|ZP_20764352.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437475832|ref|ZP_20766909.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437495015|ref|ZP_20772615.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437503209|ref|ZP_20774826.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437542120|ref|ZP_20782544.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437555930|ref|ZP_20784897.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437579134|ref|ZP_20791659.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437586610|ref|ZP_20793465.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437608524|ref|ZP_20800713.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437624017|ref|ZP_20805185.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437650000|ref|ZP_20809637.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437662975|ref|ZP_20813696.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437677959|ref|ZP_20817450.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437690912|ref|ZP_20820543.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437714417|ref|ZP_20827651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437794804|ref|ZP_20837444.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437801405|ref|ZP_20838137.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437965280|ref|ZP_20852572.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438094745|ref|ZP_20861700.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438104522|ref|ZP_20865879.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438111003|ref|ZP_20868291.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438148248|ref|ZP_20876294.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|445171861|ref|ZP_21396270.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445183346|ref|ZP_21398674.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445228312|ref|ZP_21404655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445327269|ref|ZP_21412731.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445348332|ref|ZP_21419617.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445354827|ref|ZP_21421632.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|206709813|emb|CAR34165.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|357206975|gb|AET55021.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|395981500|gb|EJH90721.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395982460|gb|EJH91668.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395992138|gb|EJI01257.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395996258|gb|EJI05310.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|395996388|gb|EJI05439.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396005582|gb|EJI14560.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396012437|gb|EJI21334.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396015010|gb|EJI23893.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396015555|gb|EJI24429.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396021759|gb|EJI30574.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396022904|gb|EJI31707.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396029199|gb|EJI37937.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396037731|gb|EJI46377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396043381|gb|EJI51984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396048102|gb|EJI56664.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396050475|gb|EJI58999.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396054400|gb|EJI62892.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396061471|gb|EJI69896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396068551|gb|EJI76899.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396068934|gb|EJI77279.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|434938293|gb|ELL45288.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434960435|gb|ELL53814.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434965476|gb|ELL58417.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434969476|gb|ELL62180.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434976430|gb|ELL68666.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434981507|gb|ELL73394.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434984643|gb|ELL76371.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434985911|gb|ELL77598.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434999274|gb|ELL90471.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|434999506|gb|ELL90680.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435002972|gb|ELL94017.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435005400|gb|ELL96320.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435014066|gb|ELM04676.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435019759|gb|ELM10203.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435022665|gb|ELM12961.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435029119|gb|ELM19177.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435034335|gb|ELM24225.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435039526|gb|ELM29296.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435041922|gb|ELM31655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435053115|gb|ELM42569.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435053339|gb|ELM42791.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435056264|gb|ELM45655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435061294|gb|ELM50523.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435061936|gb|ELM51132.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435066629|gb|ELM55708.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435083249|gb|ELM71854.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435083979|gb|ELM72580.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435085217|gb|ELM73770.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435088720|gb|ELM77177.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435089445|gb|ELM77878.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435097959|gb|ELM86218.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435101703|gb|ELM89836.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435104396|gb|ELM92451.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435107420|gb|ELM95404.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435114647|gb|ELN02440.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435122620|gb|ELN10135.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435129687|gb|ELN16975.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435132008|gb|ELN19212.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435133227|gb|ELN20407.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435137798|gb|ELN24836.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435142129|gb|ELN29046.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435149425|gb|ELN36121.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435150574|gb|ELN37239.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435155353|gb|ELN41901.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435160853|gb|ELN47097.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435171755|gb|ELN57318.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435177017|gb|ELN62364.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435177884|gb|ELN63148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435180002|gb|ELN65110.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435191579|gb|ELN76135.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435192908|gb|ELN77417.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435204076|gb|ELN87791.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435211052|gb|ELN94264.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435215781|gb|ELN98265.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435222977|gb|ELO05024.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435226964|gb|ELO08501.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435235713|gb|ELO16496.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435237204|gb|ELO17903.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435241583|gb|ELO21929.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435242380|gb|ELO22691.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435252808|gb|ELO32316.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435254698|gb|ELO34082.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435259776|gb|ELO38990.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435267027|gb|ELO45751.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435268272|gb|ELO46866.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435274339|gb|ELO52455.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435281395|gb|ELO59069.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435286019|gb|ELO63360.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435291842|gb|ELO68638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435304065|gb|ELO79876.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435314312|gb|ELO87737.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435322168|gb|ELO94486.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435331518|gb|ELP02669.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435339920|gb|ELP08612.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|444861013|gb|ELX85908.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444866249|gb|ELX90987.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444870831|gb|ELX95302.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444876273|gb|ELY00452.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444880864|gb|ELY04927.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444887448|gb|ELY11148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|152971442|ref|YP_001336551.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|386036065|ref|YP_005955978.1| protein disaggregation chaperone [Klebsiella pneumoniae KCTC 2242]
gi|419972349|ref|ZP_14487777.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980701|ref|ZP_14495983.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419983727|ref|ZP_14498877.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991779|ref|ZP_14506742.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997789|ref|ZP_14512583.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420000915|ref|ZP_14515572.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010860|ref|ZP_14525327.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013477|ref|ZP_14527787.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022400|ref|ZP_14536569.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420028218|ref|ZP_14542200.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420030071|ref|ZP_14543899.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420035798|ref|ZP_14549461.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420045302|ref|ZP_14558771.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420047908|ref|ZP_14561223.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420052980|ref|ZP_14566159.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061850|ref|ZP_14574832.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420068245|ref|ZP_14581027.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420071034|ref|ZP_14583683.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420075822|ref|ZP_14588297.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420081380|ref|ZP_14593689.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421912823|ref|ZP_16342531.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421916255|ref|ZP_16345837.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424831907|ref|ZP_18256635.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424932241|ref|ZP_18350613.1| Protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425075406|ref|ZP_18478509.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425082745|ref|ZP_18485842.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425086042|ref|ZP_18489135.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425092829|ref|ZP_18495913.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428151942|ref|ZP_18999645.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428936035|ref|ZP_19009472.1| protein disaggregation chaperone [Klebsiella pneumoniae JHCK1]
gi|428942574|ref|ZP_19015558.1| protein disaggregation chaperone [Klebsiella pneumoniae VA360]
gi|449059107|ref|ZP_21736868.1| protein disaggregation chaperone [Klebsiella pneumoniae hvKP1]
gi|150956291|gb|ABR78321.1| ATP-dependent protease, Hsp 100 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|339763193|gb|AEJ99413.1| protein disaggregation chaperone [Klebsiella pneumoniae KCTC 2242]
gi|397344921|gb|EJJ38049.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397350758|gb|EJJ43844.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397355359|gb|EJJ48369.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397362187|gb|EJJ54841.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397363043|gb|EJJ55687.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397372440|gb|EJJ64924.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397377610|gb|EJJ69837.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397379560|gb|EJJ71751.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397384640|gb|EJJ76753.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397392066|gb|EJJ83880.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397402530|gb|EJJ94133.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397407815|gb|EJJ99200.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397409878|gb|EJK01175.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397415852|gb|EJK07031.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397424397|gb|EJK15295.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397426653|gb|EJK17461.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397429599|gb|EJK20309.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397441120|gb|EJK31508.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397448321|gb|EJK38500.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397453389|gb|EJK43450.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|405594595|gb|EKB68005.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405600997|gb|EKB74162.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405605974|gb|EKB78974.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405611171|gb|EKB83939.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|407806428|gb|EKF77679.1| Protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410113258|emb|CCM85156.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410121488|emb|CCM88462.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414709345|emb|CCN31049.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426298379|gb|EKV60788.1| protein disaggregation chaperone [Klebsiella pneumoniae VA360]
gi|426299164|gb|EKV61518.1| protein disaggregation chaperone [Klebsiella pneumoniae JHCK1]
gi|427538084|emb|CCM95783.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448875203|gb|EMB10228.1| protein disaggregation chaperone [Klebsiella pneumoniae hvKP1]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S
Sbjct: 739 DLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|427426223|ref|ZP_18916287.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-136]
gi|425697009|gb|EKU66701.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-136]
Length = 859
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/694 (59%), Positives = 554/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL ++ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTPDSLRKVIEHIRGNDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+ K
Sbjct: 426 VKKDEDVGSKAEVTHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 486 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLLN+E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMMQGEREKLLNMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 721 QDVRELGEGATDDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDR 779
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + A + + GFD +YGAR
Sbjct: 780 LRSRLVDRDMSLTVDDTAFDLLIDAGFDPVYGAR 813
>gi|365101806|ref|ZP_09332436.1| chaperone ClpB [Citrobacter freundii 4_7_47CFAA]
gi|363647356|gb|EHL86585.1| chaperone ClpB [Citrobacter freundii 4_7_47CFAA]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/709 (58%), Positives = 556/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 DMVLGVVSNNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|206578585|ref|YP_002237070.1| protein disaggregation chaperone [Klebsiella pneumoniae 342]
gi|288934032|ref|YP_003438091.1| ATP-dependent chaperone ClpB [Klebsiella variicola At-22]
gi|290510908|ref|ZP_06550277.1| ATP-dependent chaperone ClpB [Klebsiella sp. 1_1_55]
gi|206567643|gb|ACI09419.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae 342]
gi|288888761|gb|ADC57079.1| ATP-dependent chaperone ClpB [Klebsiella variicola At-22]
gi|289775901|gb|EFD83900.1| ATP-dependent chaperone ClpB [Klebsiella sp. 1_1_55]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S
Sbjct: 739 DLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVRMSDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|455643273|gb|EMF22401.1| protein disaggregation chaperone [Citrobacter freundii GTC 09479]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/709 (58%), Positives = 556/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 DMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|424741779|ref|ZP_18170120.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-141]
gi|422944552|gb|EKU39543.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-141]
Length = 859
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/694 (59%), Positives = 554/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL ++ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTPDSLRKVIEHIRGSDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L SK++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+ K
Sbjct: 426 VKKDEDVGSKAEVTHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 486 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLLN+E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMLQGEREKLLNMEGFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VM+ V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 721 QDVRELGEGATDDE-VRAIVMSAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDR 779
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + A + + GFD +YGAR
Sbjct: 780 LRSRLVDRDMSLNVDDTAFDLLIDAGFDPVYGAR 813
>gi|222157291|ref|YP_002557430.1| chaperone clpB [Escherichia coli LF82]
gi|222034296|emb|CAP77037.1| chaperone clpB [Escherichia coli LF82]
Length = 823
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 111 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 291 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 411 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 471 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 525 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 585 ANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 705 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 765 ALKLLSENGYDPVYGAR 781
>gi|331684248|ref|ZP_08384840.1| ATP-dependent chaperone protein ClpB [Escherichia coli H299]
gi|387617905|ref|YP_006120927.1| protein disaggregation chaperone [Escherichia coli O83:H1 str. NRG
857C]
gi|450191583|ref|ZP_21891282.1| protein disaggregation chaperone [Escherichia coli SEPT362]
gi|312947166|gb|ADR27993.1| protein disaggregation chaperone [Escherichia coli O83:H1 str. NRG
857C]
gi|331077863|gb|EGI49069.1| ATP-dependent chaperone protein ClpB [Escherichia coli H299]
gi|449319227|gb|EMD09281.1| protein disaggregation chaperone [Escherichia coli SEPT362]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|147365|gb|AAA24422.1| ATP-dependent protease binding subunit [Escherichia coli]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|205353699|ref|YP_002227500.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|375124555|ref|ZP_09769719.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|205273480|emb|CAR38457.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326628805|gb|EGE35148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
Length = 857
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|422792066|ref|ZP_16844768.1| ATP-dependent chaperone ClpB [Escherichia coli TA007]
gi|323971463|gb|EGB66699.1| ATP-dependent chaperone ClpB [Escherichia coli TA007]
Length = 809
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 97 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 156
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 157 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 216
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 217 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 276
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 277 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 336
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 337 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 396
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 397 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 456
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 457 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 510
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 511 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 570
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 571 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 630
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 631 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 690
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 691 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 750
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 751 ALKLLSENGYDPVYGAR 767
>gi|420321790|ref|ZP_14823615.1| ATP-dependent chaperone ClpB [Shigella flexneri 2850-71]
gi|391247097|gb|EIQ06353.1| ATP-dependent chaperone ClpB [Shigella flexneri 2850-71]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|375002451|ref|ZP_09726791.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353077139|gb|EHB42899.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 861
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 509 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 743 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSANGYDPVYGAR 819
>gi|260598973|ref|YP_003211544.1| protein disaggregation chaperone [Cronobacter turicensis z3032]
gi|260218150|emb|CBA32972.1| Chaperone protein clpB [Cronobacter turicensis z3032]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 537/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +++I SIA IQL L +L + IS
Sbjct: 739 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAMHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 799 ALQLLGENGYDPVYGAR 815
>gi|440771618|ref|ZP_20950532.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436420859|gb|ELP18714.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D IYGAR
Sbjct: 799 ALKLLSANGYDPIYGAR 815
>gi|238896038|ref|YP_002920774.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238548356|dbj|BAH64707.1| ATP-dependent protease [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 861
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLT 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 509 KIPELEKQLAAATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 563 LLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S
Sbjct: 743 DLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSANGYDPVYGAR 819
>gi|402779464|ref|YP_006635010.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|402540404|gb|AFQ64553.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae 1084]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLNML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S
Sbjct: 739 DLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|330012953|ref|ZP_08307535.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. MS 92-3]
gi|419764286|ref|ZP_14290526.1| ATP-dependent chaperone protein ClpB [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|328533637|gb|EGF60348.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. MS 92-3]
gi|397742869|gb|EJK90087.1| ATP-dependent chaperone protein ClpB [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 861
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLT 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 509 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 563 LLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S
Sbjct: 743 DLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSANGYDPVYGAR 819
>gi|293608681|ref|ZP_06690984.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829254|gb|EFF87616.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 838
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/694 (59%), Positives = 554/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL ++ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 105 VGVTPDSLRKVIEHIRGNDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIR 164
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 165 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAG 224
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 225 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 284
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 285 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 344
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 345 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 404
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+ K
Sbjct: 405 VKKDEDVGSKAEVTHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEK 464
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 465 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 519
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLLN+E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 520 ATGIPVAKMMQGEREKLLNMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 579
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 580 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 639
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 640 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 699
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 700 QDVRELGEGATDDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDR 758
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + A + + GFD +YGAR
Sbjct: 759 LRSRLVDRDMSLTVDDTAFDLLIDAGFDPVYGAR 792
>gi|422970256|ref|ZP_16974049.1| chaperone ClpB [Escherichia coli TA124]
gi|371600634|gb|EHN89406.1| chaperone ClpB [Escherichia coli TA124]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|293411983|ref|ZP_06654706.1| ATP-dependent chaperone ClpB [Escherichia coli B354]
gi|291468754|gb|EFF11245.1| ATP-dependent chaperone ClpB [Escherichia coli B354]
Length = 861
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 509 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 743 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSENGYDPVYGAR 819
>gi|378980143|ref|YP_005228284.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|364519555|gb|AEW62683.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
Length = 823
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 111 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLT 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 291 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDML 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 411 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 471 KIPELEKQLAAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 525 LLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 585 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++++S
Sbjct: 705 DLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQMSDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 765 ALKLLSANGYDPVYGAR 781
>gi|401677935|ref|ZP_10809906.1| protein disaggregation chaperone [Enterobacter sp. SST3]
gi|400214706|gb|EJO45621.1| protein disaggregation chaperone [Enterobacter sp. SST3]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEIATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +EN L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMENDLHNRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 739 DLVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSKNGYDPVYGAR 815
>gi|56414627|ref|YP_151702.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62181233|ref|YP_217650.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|168262170|ref|ZP_02684143.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168464169|ref|ZP_02698086.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168822477|ref|ZP_02834477.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194443281|ref|YP_002041924.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194472869|ref|ZP_03078853.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736447|ref|YP_002115671.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197248685|ref|YP_002147563.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197363554|ref|YP_002143191.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198243260|ref|YP_002216671.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200388055|ref|ZP_03214667.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204929414|ref|ZP_03220488.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|224584513|ref|YP_002638311.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238909506|ref|ZP_04653343.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|375115573|ref|ZP_09760743.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|375120160|ref|ZP_09765327.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|409246359|ref|YP_006887066.1| Chaperone protein clpB 2 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416425230|ref|ZP_11692265.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416428136|ref|ZP_11693636.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416438592|ref|ZP_11699571.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416444260|ref|ZP_11703575.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416451863|ref|ZP_11708613.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416457253|ref|ZP_11712041.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416471313|ref|ZP_11719159.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416474725|ref|ZP_11720290.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416489037|ref|ZP_11726006.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416497226|ref|ZP_11729608.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416507694|ref|ZP_11735638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416515027|ref|ZP_11738438.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416527361|ref|ZP_11743196.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416532861|ref|ZP_11745893.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416540936|ref|ZP_11750686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416549265|ref|ZP_11755302.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416563432|ref|ZP_11762785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416573080|ref|ZP_11767664.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416579681|ref|ZP_11771475.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416587188|ref|ZP_11775896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416594256|ref|ZP_11780337.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416597887|ref|ZP_11782274.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416606432|ref|ZP_11787774.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416616636|ref|ZP_11794260.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416619236|ref|ZP_11794996.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416632441|ref|ZP_11801430.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416640766|ref|ZP_11805195.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416647656|ref|ZP_11808528.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416661132|ref|ZP_11815354.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416665644|ref|ZP_11816879.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416677945|ref|ZP_11822385.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416706416|ref|ZP_11831675.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416711904|ref|ZP_11835615.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416718100|ref|ZP_11840208.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416726683|ref|ZP_11846728.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416733321|ref|ZP_11850397.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416737812|ref|ZP_11852954.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416747220|ref|ZP_11858196.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416758177|ref|ZP_11863529.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416765406|ref|ZP_11868787.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416771063|ref|ZP_11872368.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418482222|ref|ZP_13051245.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418492655|ref|ZP_13059136.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418497418|ref|ZP_13063838.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418500676|ref|ZP_13067070.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418504930|ref|ZP_13071283.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418510546|ref|ZP_13076826.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418524997|ref|ZP_13090981.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|418760238|ref|ZP_13316395.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418766415|ref|ZP_13322491.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418773353|ref|ZP_13329340.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418774360|ref|ZP_13330329.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418780080|ref|ZP_13335973.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418782674|ref|ZP_13338535.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418790107|ref|ZP_13345887.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418791658|ref|ZP_13347413.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418797885|ref|ZP_13353567.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418803885|ref|ZP_13359501.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418805630|ref|ZP_13361212.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418809792|ref|ZP_13365341.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418817880|ref|ZP_13373362.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418823718|ref|ZP_13379125.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418833712|ref|ZP_13388630.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418838050|ref|ZP_13392905.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418841636|ref|ZP_13396454.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418846612|ref|ZP_13401380.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418851349|ref|ZP_13406062.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418856356|ref|ZP_13411002.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418865541|ref|ZP_13420018.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418865981|ref|ZP_13420446.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419786445|ref|ZP_14312172.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419792847|ref|ZP_14318477.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|421887443|ref|ZP_16318600.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|437829716|ref|ZP_20844238.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|440766164|ref|ZP_20945163.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|445141004|ref|ZP_21385209.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445157178|ref|ZP_21392909.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|452123537|ref|YP_007473785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|56128884|gb|AAV78390.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62128866|gb|AAX66569.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
system with DnaK, DnaJ, and GrpE [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|194401944|gb|ACF62166.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194459233|gb|EDX48072.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711949|gb|ACF91170.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195633279|gb|EDX51693.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197095031|emb|CAR60577.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197212388|gb|ACH49785.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197937776|gb|ACH75109.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199605153|gb|EDZ03698.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204321133|gb|EDZ06333.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205341135|gb|EDZ27899.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205349068|gb|EDZ35699.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|224469040|gb|ACN46870.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|320087093|emb|CBY96861.1| Chaperone protein clpB 2 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322614490|gb|EFY11421.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621445|gb|EFY18298.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624306|gb|EFY21139.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629395|gb|EFY26173.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633635|gb|EFY30377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638322|gb|EFY35020.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639760|gb|EFY36443.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647378|gb|EFY43874.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650452|gb|EFY46862.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656055|gb|EFY52355.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661449|gb|EFY57674.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662649|gb|EFY58857.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667022|gb|EFY63197.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671391|gb|EFY67514.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677602|gb|EFY73665.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681572|gb|EFY77602.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322683972|gb|EFY79982.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322715719|gb|EFZ07290.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323195541|gb|EFZ80719.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197914|gb|EFZ83037.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203092|gb|EFZ88124.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323210517|gb|EFZ95401.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218202|gb|EGA02914.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221532|gb|EGA05945.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323230965|gb|EGA15083.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234683|gb|EGA18769.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238722|gb|EGA22772.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241421|gb|EGA25452.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246881|gb|EGA30848.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253280|gb|EGA37110.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257076|gb|EGA40785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260451|gb|EGA44062.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264492|gb|EGA47998.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269627|gb|EGA53080.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326624427|gb|EGE30772.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|363553272|gb|EHL37528.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363556032|gb|EHL40250.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363564474|gb|EHL48522.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363569331|gb|EHL53293.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363569941|gb|EHL53886.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363571863|gb|EHL55763.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363572447|gb|EHL56339.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366054678|gb|EHN19026.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366055874|gb|EHN20208.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366064955|gb|EHN29152.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366068546|gb|EHN32686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366069829|gb|EHN33950.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366076744|gb|EHN40780.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366830316|gb|EHN57188.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372207197|gb|EHP20697.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|379982933|emb|CCF90873.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|392618124|gb|EIX00536.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392621684|gb|EIX04034.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392730160|gb|EIZ87410.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392738004|gb|EIZ95154.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392742866|gb|EIZ99943.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392750562|gb|EJA07524.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392751172|gb|EJA08127.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392759168|gb|EJA16024.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392759665|gb|EJA16513.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392767929|gb|EJA24689.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392770497|gb|EJA27223.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392772233|gb|EJA28936.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392783589|gb|EJA40207.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392784383|gb|EJA40984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392785709|gb|EJA42280.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392786838|gb|EJA43387.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392794914|gb|EJA51300.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392797356|gb|EJA53673.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392808313|gb|EJA64364.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392810065|gb|EJA66091.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392817795|gb|EJA73699.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392819681|gb|EJA75539.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392827764|gb|EJA83465.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392840829|gb|EJA96363.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|435303916|gb|ELO79738.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|436423564|gb|ELP21374.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444846612|gb|ELX71773.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444851725|gb|ELX76812.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|451912541|gb|AGF84347.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|170765528|ref|ZP_02900339.1| ATP-dependent chaperone protein ClpB [Escherichia albertii TW07627]
gi|170124674|gb|EDS93605.1| ATP-dependent chaperone protein ClpB [Escherichia albertii TW07627]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|260549974|ref|ZP_05824189.1| ATPase with chaperone activity [Acinetobacter sp. RUH2624]
gi|424056249|ref|ZP_17793770.1| ATP-dependent chaperone ClpB [Acinetobacter nosocomialis Ab22222]
gi|425741319|ref|ZP_18859469.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-487]
gi|445434253|ref|ZP_21439946.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC021]
gi|260406966|gb|EEX00444.1| ATPase with chaperone activity [Acinetobacter sp. RUH2624]
gi|407441289|gb|EKF47795.1| ATP-dependent chaperone ClpB [Acinetobacter nosocomialis Ab22222]
gi|425492625|gb|EKU58879.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-487]
gi|444756658|gb|ELW81198.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
OIFC021]
Length = 859
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/694 (58%), Positives = 555/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ +SL ++ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTPDSLRKVIEHIRGSDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++K+I +++ +Y +LE++WK EKTL++ ++Q + E++K R+ K
Sbjct: 426 VKKDEDAGSKAEVTHLEKQIAEVQKEYNDLEEVWKSEKTLVEGTKQAQVELDKARIAFEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 486 AQREGDLAEAARLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLL++E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMMQGEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 721 QDVRELGEGATDDE-VRTVVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDR 779
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L+ +M L + +A + + GFD +YGAR
Sbjct: 780 LRSRLVDRDMSLTVDDSAFDLLIDAGFDPVYGAR 813
>gi|15832709|ref|NP_311482.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
Sakai]
gi|16130513|ref|NP_417083.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. MG1655]
gi|74313151|ref|YP_311570.1| protein disaggregation chaperone [Shigella sonnei Ss046]
gi|82545045|ref|YP_408992.1| protein disaggregation chaperone [Shigella boydii Sb227]
gi|110642755|ref|YP_670485.1| protein disaggregation chaperone [Escherichia coli 536]
gi|157158232|ref|YP_001463913.1| protein disaggregation chaperone [Escherichia coli E24377A]
gi|157162068|ref|YP_001459386.1| protein disaggregation chaperone [Escherichia coli HS]
gi|168752067|ref|ZP_02777089.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4113]
gi|168758662|ref|ZP_02783669.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4401]
gi|168762385|ref|ZP_02787392.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4501]
gi|168771698|ref|ZP_02796705.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4486]
gi|168773480|ref|ZP_02798487.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4196]
gi|168778570|ref|ZP_02803577.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4076]
gi|168789495|ref|ZP_02814502.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC869]
gi|168801710|ref|ZP_02826717.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC508]
gi|170019129|ref|YP_001724083.1| protein disaggregation chaperone [Escherichia coli ATCC 8739]
gi|170082197|ref|YP_001731517.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. DH10B]
gi|170683980|ref|YP_001744777.1| protein disaggregation chaperone [Escherichia coli SMS-3-5]
gi|188492624|ref|ZP_02999894.1| ATP-dependent chaperone protein ClpB [Escherichia coli 53638]
gi|191169051|ref|ZP_03030814.1| ATP-dependent chaperone protein ClpB [Escherichia coli B7A]
gi|191174569|ref|ZP_03036064.1| ATP-dependent chaperone protein ClpB [Escherichia coli F11]
gi|193064051|ref|ZP_03045136.1| ATP-dependent chaperone protein ClpB [Escherichia coli E22]
gi|194430164|ref|ZP_03062665.1| ATP-dependent chaperone protein ClpB [Escherichia coli B171]
gi|194439334|ref|ZP_03071412.1| ATP-dependent chaperone protein ClpB [Escherichia coli 101-1]
gi|195940187|ref|ZP_03085569.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EC4024]
gi|208805997|ref|ZP_03248334.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4206]
gi|208813052|ref|ZP_03254381.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4045]
gi|208819305|ref|ZP_03259625.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4042]
gi|209397795|ref|YP_002272065.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EC4115]
gi|209920069|ref|YP_002294153.1| protein disaggregation chaperone [Escherichia coli SE11]
gi|215487931|ref|YP_002330362.1| protein disaggregation chaperone [Escherichia coli O127:H6 str.
E2348/69]
gi|217326744|ref|ZP_03442827.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str.
TW14588]
gi|218555172|ref|YP_002388085.1| protein disaggregation chaperone [Escherichia coli IAI1]
gi|218690711|ref|YP_002398923.1| protein disaggregation chaperone [Escherichia coli ED1a]
gi|218696217|ref|YP_002403884.1| protein disaggregation chaperone [Escherichia coli 55989]
gi|218701104|ref|YP_002408733.1| protein disaggregation chaperone [Escherichia coli IAI39]
gi|218706094|ref|YP_002413613.1| protein disaggregation chaperone [Escherichia coli UMN026]
gi|238901753|ref|YP_002927549.1| protein disaggregation chaperone [Escherichia coli BW2952]
gi|251785915|ref|YP_003000219.1| ClpB chaperone [Escherichia coli BL21(DE3)]
gi|253772512|ref|YP_003035343.1| protein disaggregation chaperone [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162563|ref|YP_003045671.1| protein disaggregation chaperone [Escherichia coli B str. REL606]
gi|254289324|ref|YP_003055072.1| protein disaggregation chaperone [Escherichia coli BL21(DE3)]
gi|254794540|ref|YP_003079377.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
TW14359]
gi|260845274|ref|YP_003223052.1| protein disaggregation chaperone ClpB [Escherichia coli O103:H2
str. 12009]
gi|260856682|ref|YP_003230573.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
11368]
gi|260869274|ref|YP_003235676.1| protein disaggregation chaperone ClpB [Escherichia coli O111:H-
str. 11128]
gi|261227477|ref|ZP_05941758.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255671|ref|ZP_05948204.1| protein disaggregation chaperone ClpB [Escherichia coli O157:H7
str. FRIK966]
gi|297516260|ref|ZP_06934646.1| protein disaggregation chaperone [Escherichia coli OP50]
gi|301024190|ref|ZP_07187897.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 196-1]
gi|306812488|ref|ZP_07446686.1| protein disaggregation chaperone [Escherichia coli NC101]
gi|307315094|ref|ZP_07594678.1| ATP-dependent chaperone ClpB [Escherichia coli W]
gi|312965507|ref|ZP_07779739.1| ATP-dependent chaperone ClpB [Escherichia coli 2362-75]
gi|331664159|ref|ZP_08365068.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA143]
gi|331669344|ref|ZP_08370190.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA271]
gi|331674036|ref|ZP_08374798.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA280]
gi|378711951|ref|YP_005276844.1| ATP-dependent chaperone ClpB [Escherichia coli KO11FL]
gi|383179715|ref|YP_005457720.1| protein disaggregation chaperone [Shigella sonnei 53G]
gi|386281657|ref|ZP_10059317.1| chaperone ClpB [Escherichia sp. 4_1_40B]
gi|386594643|ref|YP_006091043.1| ATP-dependent chaperone ClpB [Escherichia coli DH1]
gi|386609990|ref|YP_006125476.1| protein disaggregation chaperone [Escherichia coli W]
gi|386615294|ref|YP_006134960.1| ATP-dependent chaperone ClpB [Escherichia coli UMNK88]
gi|386620191|ref|YP_006139771.1| ClpB protein [Escherichia coli NA114]
gi|386625329|ref|YP_006145057.1| protein disaggregation chaperone [Escherichia coli O7:K1 str. CE10]
gi|386640115|ref|YP_006106913.1| ATP-dependent chaperone protein ClpB [Escherichia coli ABU 83972]
gi|386700465|ref|YP_006164302.1| protein disaggregation chaperone [Escherichia coli KO11FL]
gi|386705853|ref|YP_006169700.1| Chaperone protein clpB [Escherichia coli P12b]
gi|386710479|ref|YP_006174200.1| protein disaggregation chaperone [Escherichia coli W]
gi|387507957|ref|YP_006160213.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
RM12579]
gi|387608240|ref|YP_006097096.1| chaperone (heat-shock protein F84.1) [Escherichia coli 042]
gi|387613238|ref|YP_006116354.1| chaperone (heat-shock protein F84.1) [Escherichia coli ETEC H10407]
gi|387622288|ref|YP_006129916.1| heat shock protein [Escherichia coli DH1]
gi|387830483|ref|YP_003350420.1| ATP-dependent protease [Escherichia coli SE15]
gi|388478624|ref|YP_490816.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. W3110]
gi|404375936|ref|ZP_10981112.1| chaperone ClpB [Escherichia sp. 1_1_43]
gi|407470487|ref|YP_006783070.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407480851|ref|YP_006778000.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2011C-3493]
gi|410481417|ref|YP_006768963.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414577322|ref|ZP_11434499.1| ATP-dependent chaperone ClpB [Shigella sonnei 3233-85]
gi|415778701|ref|ZP_11489695.1| ATP-dependent chaperone ClpB [Escherichia coli 3431]
gi|415784644|ref|ZP_11492465.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa14]
gi|415822347|ref|ZP_11510975.1| ATP-dependent chaperone ClpB [Escherichia coli OK1180]
gi|415828630|ref|ZP_11515128.1| ATP-dependent chaperone ClpB [Escherichia coli OK1357]
gi|416260475|ref|ZP_11640263.1| ClpB protein [Shigella dysenteriae CDC 74-1112]
gi|416279141|ref|ZP_11644813.1| ClpB protein [Shigella boydii ATCC 9905]
gi|416299381|ref|ZP_11652348.1| ClpB protein [Shigella flexneri CDC 796-83]
gi|416307900|ref|ZP_11654808.1| ClpB protein [Escherichia coli O157:H7 str. 1044]
gi|416321751|ref|ZP_11663599.1| ClpB protein [Escherichia coli O157:H7 str. EC1212]
gi|416326811|ref|ZP_11666923.1| ClpB protein [Escherichia coli O157:H7 str. 1125]
gi|416336625|ref|ZP_11673095.1| ClpB protein [Escherichia coli WV_060327]
gi|416345929|ref|ZP_11679302.1| ClpB protein [Escherichia coli EC4100B]
gi|416776084|ref|ZP_11874696.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
G5101]
gi|416787728|ref|ZP_11879610.1| protein disaggregation chaperone [Escherichia coli O157:H- str.
493-89]
gi|416799412|ref|ZP_11884525.1| protein disaggregation chaperone [Escherichia coli O157:H- str. H
2687]
gi|416809743|ref|ZP_11889208.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
3256-97]
gi|416820392|ref|ZP_11893767.1| protein disaggregation chaperone [Escherichia coli O55:H7 str. USDA
5905]
gi|416831290|ref|ZP_11899055.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
LSU-61]
gi|416898784|ref|ZP_11928330.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_7v]
gi|417115524|ref|ZP_11966660.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2741]
gi|417122593|ref|ZP_11971851.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0246]
gi|417135528|ref|ZP_11980313.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0588]
gi|417150815|ref|ZP_11990554.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2264]
gi|417154595|ref|ZP_11992724.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0497]
gi|417166450|ref|ZP_11999806.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0741]
gi|417174839|ref|ZP_12004635.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2608]
gi|417184955|ref|ZP_12010451.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0624]
gi|417188936|ref|ZP_12012494.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0522]
gi|417214357|ref|ZP_12022904.1| ATP-dependent chaperone protein ClpB [Escherichia coli JB1-95]
gi|417222149|ref|ZP_12025589.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.154]
gi|417231520|ref|ZP_12032918.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0959]
gi|417251352|ref|ZP_12043117.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0967]
gi|417262165|ref|ZP_12049645.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.3916]
gi|417268814|ref|ZP_12056174.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.3884]
gi|417272803|ref|ZP_12060152.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.4168]
gi|417292279|ref|ZP_12079560.1| ATP-dependent chaperone protein ClpB [Escherichia coli B41]
gi|417299788|ref|ZP_12087015.1| ATP-dependent chaperone protein ClpB [Escherichia coli 900105
(10e)]
gi|417587600|ref|ZP_12238367.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_C165-02]
gi|417592929|ref|ZP_12243624.1| ATP-dependent chaperone ClpB [Escherichia coli 2534-86]
gi|417597900|ref|ZP_12248535.1| ATP-dependent chaperone ClpB [Escherichia coli 3030-1]
gi|417603264|ref|ZP_12253832.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_94C]
gi|417609221|ref|ZP_12259723.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_DG131-3]
gi|417614061|ref|ZP_12264518.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_EH250]
gi|417619179|ref|ZP_12269592.1| ATP-dependent chaperone ClpB [Escherichia coli G58-1]
gi|417631236|ref|ZP_12281469.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_MHI813]
gi|417635568|ref|ZP_12285779.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_S1191]
gi|417640347|ref|ZP_12290487.1| ATP-dependent chaperone ClpB [Escherichia coli TX1999]
gi|417663139|ref|ZP_12312720.1| ClpB protein [Escherichia coli AA86]
gi|417667996|ref|ZP_12317540.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_O31]
gi|417713893|ref|ZP_12362856.1| ATP-dependent chaperone ClpB [Shigella flexneri K-272]
gi|417718518|ref|ZP_12367412.1| ATP-dependent chaperone ClpB [Shigella flexneri K-227]
gi|417806140|ref|ZP_12453086.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
LB226692]
gi|417833888|ref|ZP_12480335.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
01-09591]
gi|417943982|ref|ZP_12587227.1| protein disaggregation chaperone [Escherichia coli XH140A]
gi|417978062|ref|ZP_12618836.1| protein disaggregation chaperone [Escherichia coli XH001]
gi|418267386|ref|ZP_12886607.1| ATP-dependent chaperone ClpB [Shigella sonnei str. Moseley]
gi|418304087|ref|ZP_12915881.1| ATP-dependent chaperone ClpB [Escherichia coli UMNF18]
gi|418944161|ref|ZP_13497263.1| protein disaggregation chaperone [Escherichia coli O157:H43 str.
T22]
gi|418957031|ref|ZP_13508956.1| ATP-dependent chaperone protein ClpB [Escherichia coli J53]
gi|418998025|ref|ZP_13545616.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1A]
gi|419003146|ref|ZP_13550669.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1B]
gi|419008833|ref|ZP_13556262.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1C]
gi|419014504|ref|ZP_13561851.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1D]
gi|419025019|ref|ZP_13572244.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2A]
gi|419030056|ref|ZP_13577216.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2C]
gi|419040762|ref|ZP_13587786.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2E]
gi|419045837|ref|ZP_13592780.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3A]
gi|419048721|ref|ZP_13595643.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3B]
gi|419056229|ref|ZP_13603069.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3C]
gi|419065813|ref|ZP_13612510.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3D]
gi|419070710|ref|ZP_13616330.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3E]
gi|419074940|ref|ZP_13620486.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3F]
gi|419081790|ref|ZP_13627237.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4A]
gi|419085877|ref|ZP_13631255.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4B]
gi|419094680|ref|ZP_13639956.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4C]
gi|419099393|ref|ZP_13644589.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4D]
gi|419105595|ref|ZP_13650721.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4E]
gi|419112772|ref|ZP_13657812.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4F]
gi|419121670|ref|ZP_13666618.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5B]
gi|419127131|ref|ZP_13672012.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5C]
gi|419132616|ref|ZP_13677451.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5D]
gi|419137752|ref|ZP_13682543.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5E]
gi|419143546|ref|ZP_13688283.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6A]
gi|419149752|ref|ZP_13694404.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6B]
gi|419155000|ref|ZP_13699560.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6C]
gi|419160287|ref|ZP_13704791.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6D]
gi|419171261|ref|ZP_13715147.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7A]
gi|419175974|ref|ZP_13719790.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7B]
gi|419181894|ref|ZP_13725506.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7C]
gi|419187344|ref|ZP_13730855.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7D]
gi|419200632|ref|ZP_13743898.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8A]
gi|419203059|ref|ZP_13746263.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8B]
gi|419210823|ref|ZP_13753899.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8C]
gi|419219050|ref|ZP_13762016.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8E]
gi|419233674|ref|ZP_13776447.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9B]
gi|419238960|ref|ZP_13781674.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9C]
gi|419250237|ref|ZP_13792815.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9E]
gi|419256078|ref|ZP_13798590.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10A]
gi|419262386|ref|ZP_13804799.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10B]
gi|419273828|ref|ZP_13816122.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10D]
gi|419278381|ref|ZP_13820632.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10E]
gi|419285292|ref|ZP_13827462.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10F]
gi|419290582|ref|ZP_13832671.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11A]
gi|419295915|ref|ZP_13837958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11B]
gi|419307494|ref|ZP_13849392.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11D]
gi|419312508|ref|ZP_13854369.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11E]
gi|419317886|ref|ZP_13859688.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12A]
gi|419324074|ref|ZP_13865766.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12B]
gi|419330102|ref|ZP_13871703.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12C]
gi|419335677|ref|ZP_13877199.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12D]
gi|419341032|ref|ZP_13882495.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12E]
gi|419346241|ref|ZP_13887613.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13A]
gi|419371080|ref|ZP_13912196.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14A]
gi|419376528|ref|ZP_13917551.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14B]
gi|419381863|ref|ZP_13922812.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14C]
gi|419387210|ref|ZP_13928085.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14D]
gi|419392708|ref|ZP_13933514.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15A]
gi|419397694|ref|ZP_13938462.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15B]
gi|419408266|ref|ZP_13948952.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15D]
gi|419413747|ref|ZP_13954398.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15E]
gi|419701433|ref|ZP_14229033.1| protein disaggregation chaperone [Escherichia coli SCI-07]
gi|419806263|ref|ZP_14331376.1| protein disaggregation chaperone [Escherichia coli AI27]
gi|419865985|ref|ZP_14388357.1| protein disaggregation chaperone [Escherichia coli O103:H25 str.
CVM9340]
gi|419872055|ref|ZP_14394099.1| protein disaggregation chaperone [Escherichia coli O103:H2 str.
CVM9450]
gi|419878481|ref|ZP_14399948.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9534]
gi|419880948|ref|ZP_14402308.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9545]
gi|419887812|ref|ZP_14408365.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9570]
gi|419897690|ref|ZP_14417271.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9574]
gi|419904021|ref|ZP_14423031.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9942]
gi|419906107|ref|ZP_14425039.1| heat shock protein [Escherichia coli O26:H11 str. CVM10026]
gi|419921252|ref|ZP_14439309.1| protein disaggregation chaperone [Escherichia coli 541-15]
gi|419934375|ref|ZP_14451489.1| protein disaggregation chaperone [Escherichia coli 576-1]
gi|419939900|ref|ZP_14456683.1| protein disaggregation chaperone [Escherichia coli 75]
gi|419948570|ref|ZP_14464864.1| protein disaggregation chaperone [Escherichia coli CUMT8]
gi|420091280|ref|ZP_14603031.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9602]
gi|420093021|ref|ZP_14604709.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9634]
gi|420103377|ref|ZP_14614257.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9455]
gi|420110872|ref|ZP_14620772.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9553]
gi|420116853|ref|ZP_14626228.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10021]
gi|420124515|ref|ZP_14633366.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10030]
gi|420128968|ref|ZP_14637514.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10224]
gi|420135381|ref|ZP_14643468.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9952]
gi|420270857|ref|ZP_14773214.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA22]
gi|420276604|ref|ZP_14778887.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA40]
gi|420281787|ref|ZP_14784022.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW06591]
gi|420289382|ref|ZP_14791562.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10246]
gi|420290345|ref|ZP_14792512.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW11039]
gi|420299471|ref|ZP_14801520.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09109]
gi|420305417|ref|ZP_14807410.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10119]
gi|420312633|ref|ZP_14814551.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1738]
gi|420316427|ref|ZP_14818301.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1734]
gi|420386648|ref|ZP_14885996.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa12]
gi|421778297|ref|ZP_16214875.1| protein disaggregation chaperone [Escherichia coli AD30]
gi|421813585|ref|ZP_16249302.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0416]
gi|421819401|ref|ZP_16254896.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0821]
gi|421825399|ref|ZP_16260756.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK920]
gi|421831559|ref|ZP_16266849.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA7]
gi|422760079|ref|ZP_16813839.1| ATP-dependent chaperone ClpB [Escherichia coli E1167]
gi|422767878|ref|ZP_16821604.1| ATP-dependent chaperone ClpB [Escherichia coli E1520]
gi|422771505|ref|ZP_16825195.1| ATP-dependent chaperone ClpB [Escherichia coli E482]
gi|422776207|ref|ZP_16829862.1| ATP-dependent chaperone ClpB [Escherichia coli H120]
gi|422787849|ref|ZP_16840587.1| ATP-dependent chaperone ClpB [Escherichia coli H489]
gi|422803517|ref|ZP_16852003.1| ATP-dependent chaperone ClpB [Escherichia coli M863]
gi|422819253|ref|ZP_16867464.1| chaperone ClpB [Escherichia coli M919]
gi|422832204|ref|ZP_16880320.1| chaperone ClpB [Escherichia coli B093]
gi|422836955|ref|ZP_16884987.1| chaperone ClpB [Escherichia coli E101]
gi|422962607|ref|ZP_16972880.1| chaperone ClpB [Escherichia coli H494]
gi|422988714|ref|ZP_16979487.1| chaperone ClpB [Escherichia coli O104:H4 str. C227-11]
gi|422995606|ref|ZP_16986370.1| chaperone ClpB [Escherichia coli O104:H4 str. C236-11]
gi|423000751|ref|ZP_16991505.1| chaperone ClpB [Escherichia coli O104:H4 str. 09-7901]
gi|423004423|ref|ZP_16995169.1| chaperone ClpB [Escherichia coli O104:H4 str. 04-8351]
gi|423010923|ref|ZP_17001657.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-3677]
gi|423020151|ref|ZP_17010860.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4404]
gi|423025317|ref|ZP_17016014.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4522]
gi|423031138|ref|ZP_17021825.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4623]
gi|423038963|ref|ZP_17029637.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423044083|ref|ZP_17034750.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045811|ref|ZP_17036471.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423054350|ref|ZP_17043157.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423061325|ref|ZP_17050121.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423704031|ref|ZP_17678456.1| chaperone ClpB [Escherichia coli H730]
gi|423706710|ref|ZP_17681093.1| chaperone ClpB [Escherichia coli B799]
gi|423726319|ref|ZP_17700374.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA31]
gi|424078689|ref|ZP_17815677.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA505]
gi|424085155|ref|ZP_17821656.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA517]
gi|424091567|ref|ZP_17827508.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1996]
gi|424098188|ref|ZP_17833506.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1985]
gi|424104420|ref|ZP_17839198.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1990]
gi|424111092|ref|ZP_17845334.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93-001]
gi|424117029|ref|ZP_17850875.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA3]
gi|424123211|ref|ZP_17856539.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA5]
gi|424129376|ref|ZP_17862289.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA9]
gi|424135648|ref|ZP_17868118.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA10]
gi|424142216|ref|ZP_17874109.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA14]
gi|424148643|ref|ZP_17880025.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA15]
gi|424154459|ref|ZP_17885421.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA24]
gi|424251186|ref|ZP_17890985.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA25]
gi|424329347|ref|ZP_17896896.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA28]
gi|424450894|ref|ZP_17902607.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA32]
gi|424457097|ref|ZP_17908240.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA33]
gi|424463535|ref|ZP_17913979.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA39]
gi|424469873|ref|ZP_17919703.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA41]
gi|424476396|ref|ZP_17925719.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA42]
gi|424482151|ref|ZP_17931138.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07945]
gi|424488309|ref|ZP_17936884.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09098]
gi|424494886|ref|ZP_17942609.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09195]
gi|424501680|ref|ZP_17948582.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4203]
gi|424507926|ref|ZP_17954329.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4196]
gi|424515247|ref|ZP_17959938.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14313]
gi|424521466|ref|ZP_17965601.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14301]
gi|424527359|ref|ZP_17971082.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4421]
gi|424545659|ref|ZP_17988072.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4402]
gi|424551901|ref|ZP_17993766.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4439]
gi|424558086|ref|ZP_17999509.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4436]
gi|424564431|ref|ZP_18005439.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4437]
gi|424570565|ref|ZP_18011125.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4448]
gi|424576712|ref|ZP_18016793.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1845]
gi|424582550|ref|ZP_18022202.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1863]
gi|424751118|ref|ZP_18179160.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424761399|ref|ZP_18188980.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424773376|ref|ZP_18200438.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424815314|ref|ZP_18240465.1| protein disaggregation chaperone [Escherichia fergusonii ECD227]
gi|425100569|ref|ZP_18503290.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4870]
gi|425105317|ref|ZP_18507640.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.2239]
gi|425116070|ref|ZP_18517867.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0566]
gi|425120835|ref|ZP_18522528.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0569]
gi|425127258|ref|ZP_18528433.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0586]
gi|425132990|ref|ZP_18533845.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.2524]
gi|425139496|ref|ZP_18539883.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0833]
gi|425145289|ref|ZP_18545289.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0869]
gi|425151401|ref|ZP_18551020.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.0221]
gi|425163622|ref|ZP_18562514.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA506]
gi|425169365|ref|ZP_18567845.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA507]
gi|425181458|ref|ZP_18579160.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1999]
gi|425187724|ref|ZP_18585004.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1997]
gi|425194498|ref|ZP_18591273.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE1487]
gi|425207358|ref|ZP_18603162.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK2001]
gi|425213113|ref|ZP_18608520.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA4]
gi|425219234|ref|ZP_18614207.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA23]
gi|425225784|ref|ZP_18620257.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA49]
gi|425232047|ref|ZP_18626093.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA45]
gi|425237966|ref|ZP_18631691.1| ATP-dependent chaperone protein ClpB [Escherichia coli TT12B]
gi|425244183|ref|ZP_18637497.1| ATP-dependent chaperone protein ClpB [Escherichia coli MA6]
gi|425250353|ref|ZP_18643295.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5905]
gi|425256175|ref|ZP_18648701.1| ATP-dependent chaperone protein ClpB [Escherichia coli CB7326]
gi|425262430|ref|ZP_18654445.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC96038]
gi|425268429|ref|ZP_18660064.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5412]
gi|425273745|ref|ZP_18665153.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW15901]
gi|425284289|ref|ZP_18675324.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW00353]
gi|425295864|ref|ZP_18686073.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA38]
gi|425306330|ref|ZP_18696028.1| ATP-dependent chaperone protein ClpB [Escherichia coli N1]
gi|425312568|ref|ZP_18701759.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1735]
gi|425324632|ref|ZP_18713008.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1737]
gi|425330997|ref|ZP_18718860.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1846]
gi|425337173|ref|ZP_18724553.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1847]
gi|425343514|ref|ZP_18730411.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1848]
gi|425349324|ref|ZP_18735799.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1849]
gi|425355619|ref|ZP_18741692.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1850]
gi|425361583|ref|ZP_18747236.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1856]
gi|425367763|ref|ZP_18752931.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1862]
gi|425374112|ref|ZP_18758760.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1864]
gi|425380770|ref|ZP_18764785.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1865]
gi|425387002|ref|ZP_18770565.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1866]
gi|425395081|ref|ZP_18778175.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1868]
gi|425399791|ref|ZP_18782502.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1869]
gi|425405876|ref|ZP_18788105.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1870]
gi|425412267|ref|ZP_18794036.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE098]
gi|425418589|ref|ZP_18799865.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK523]
gi|425423439|ref|ZP_18804603.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1288]
gi|425429849|ref|ZP_18810467.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1304]
gi|427805771|ref|ZP_18972838.1| heat shock protein [Escherichia coli chi7122]
gi|427810267|ref|ZP_18977332.1| heat shock protein [Escherichia coli]
gi|428948274|ref|ZP_19020564.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1467]
gi|428954364|ref|ZP_19026171.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1042]
gi|428960336|ref|ZP_19031650.1| ATP-dependent chaperone protein ClpB [Escherichia coli 89.0511]
gi|428966954|ref|ZP_19037681.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0091]
gi|428972670|ref|ZP_19043017.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0039]
gi|428979173|ref|ZP_19049007.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.2281]
gi|428984924|ref|ZP_19054328.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0055]
gi|428991079|ref|ZP_19060077.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0056]
gi|428996949|ref|ZP_19065554.1| ATP-dependent chaperone protein ClpB [Escherichia coli 94.0618]
gi|429003194|ref|ZP_19071327.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0183]
gi|429009275|ref|ZP_19076800.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.1288]
gi|429021689|ref|ZP_19088221.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0428]
gi|429033930|ref|ZP_19099462.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0939]
gi|429039986|ref|ZP_19105104.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0932]
gi|429045892|ref|ZP_19110615.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0107]
gi|429051310|ref|ZP_19115880.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0003]
gi|429056686|ref|ZP_19121010.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.1742]
gi|429062187|ref|ZP_19126210.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0007]
gi|429068460|ref|ZP_19131935.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0672]
gi|429074406|ref|ZP_19137661.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0678]
gi|429079599|ref|ZP_19142738.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0713]
gi|429720179|ref|ZP_19255107.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772079|ref|ZP_19304100.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02030]
gi|429777024|ref|ZP_19309000.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785751|ref|ZP_19317647.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02092]
gi|429791641|ref|ZP_19323496.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02093]
gi|429792489|ref|ZP_19324339.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02281]
gi|429799065|ref|ZP_19330864.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02318]
gi|429807578|ref|ZP_19339303.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02913]
gi|429812478|ref|ZP_19344162.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03439]
gi|429818000|ref|ZP_19349638.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-04080]
gi|429823211|ref|ZP_19354806.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03943]
gi|429827622|ref|ZP_19358673.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0109]
gi|429833979|ref|ZP_19364338.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0010]
gi|429904586|ref|ZP_19370565.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908724|ref|ZP_19374688.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914596|ref|ZP_19380543.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919626|ref|ZP_19385557.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925446|ref|ZP_19391359.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929382|ref|ZP_19395284.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935921|ref|ZP_19401807.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941601|ref|ZP_19407475.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5603]
gi|429944282|ref|ZP_19410144.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951840|ref|ZP_19417686.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955189|ref|ZP_19421021.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0466]
gi|432354507|ref|ZP_19597777.1| chaperone ClpB [Escherichia coli KTE2]
gi|432370814|ref|ZP_19613897.1| chaperone ClpB [Escherichia coli KTE10]
gi|432377798|ref|ZP_19620787.1| chaperone ClpB [Escherichia coli KTE12]
gi|432382286|ref|ZP_19625228.1| chaperone ClpB [Escherichia coli KTE15]
gi|432388263|ref|ZP_19631146.1| chaperone ClpB [Escherichia coli KTE16]
gi|432389693|ref|ZP_19632563.1| chaperone ClpB [Escherichia coli KTE21]
gi|432398538|ref|ZP_19641317.1| chaperone ClpB [Escherichia coli KTE25]
gi|432402856|ref|ZP_19645607.1| chaperone ClpB [Escherichia coli KTE26]
gi|432407665|ref|ZP_19650372.1| chaperone ClpB [Escherichia coli KTE28]
gi|432412756|ref|ZP_19655417.1| chaperone ClpB [Escherichia coli KTE39]
gi|432418069|ref|ZP_19660667.1| chaperone ClpB [Escherichia coli KTE44]
gi|432422935|ref|ZP_19665478.1| chaperone ClpB [Escherichia coli KTE178]
gi|432427129|ref|ZP_19669624.1| chaperone ClpB [Escherichia coli KTE181]
gi|432437314|ref|ZP_19679702.1| chaperone ClpB [Escherichia coli KTE188]
gi|432442055|ref|ZP_19684394.1| chaperone ClpB [Escherichia coli KTE189]
gi|432447160|ref|ZP_19689459.1| chaperone ClpB [Escherichia coli KTE191]
gi|432450725|ref|ZP_19692987.1| chaperone ClpB [Escherichia coli KTE193]
gi|432457655|ref|ZP_19699836.1| chaperone ClpB [Escherichia coli KTE201]
gi|432461588|ref|ZP_19703734.1| chaperone ClpB [Escherichia coli KTE204]
gi|432471922|ref|ZP_19713964.1| chaperone ClpB [Escherichia coli KTE206]
gi|432476816|ref|ZP_19718811.1| chaperone ClpB [Escherichia coli KTE208]
gi|432486371|ref|ZP_19728285.1| chaperone ClpB [Escherichia coli KTE212]
gi|432490359|ref|ZP_19732227.1| chaperone ClpB [Escherichia coli KTE213]
gi|432496650|ref|ZP_19738446.1| chaperone ClpB [Escherichia coli KTE214]
gi|432501075|ref|ZP_19742831.1| chaperone ClpB [Escherichia coli KTE216]
gi|432505394|ref|ZP_19747116.1| chaperone ClpB [Escherichia coli KTE220]
gi|432514894|ref|ZP_19752116.1| chaperone ClpB [Escherichia coli KTE224]
gi|432518691|ref|ZP_19755876.1| chaperone ClpB [Escherichia coli KTE228]
gi|432524788|ref|ZP_19761914.1| chaperone ClpB [Escherichia coli KTE230]
gi|432527353|ref|ZP_19764443.1| chaperone ClpB [Escherichia coli KTE233]
gi|432534909|ref|ZP_19771880.1| chaperone ClpB [Escherichia coli KTE234]
gi|432538812|ref|ZP_19775712.1| chaperone ClpB [Escherichia coli KTE235]
gi|432544230|ref|ZP_19781071.1| chaperone ClpB [Escherichia coli KTE236]
gi|432549721|ref|ZP_19786486.1| chaperone ClpB [Escherichia coli KTE237]
gi|432554637|ref|ZP_19791357.1| chaperone ClpB [Escherichia coli KTE47]
gi|432559798|ref|ZP_19796466.1| chaperone ClpB [Escherichia coli KTE49]
gi|432564879|ref|ZP_19801458.1| chaperone ClpB [Escherichia coli KTE51]
gi|432569677|ref|ZP_19806186.1| chaperone ClpB [Escherichia coli KTE53]
gi|432576854|ref|ZP_19813309.1| chaperone ClpB [Escherichia coli KTE56]
gi|432593809|ref|ZP_19830123.1| chaperone ClpB [Escherichia coli KTE60]
gi|432603220|ref|ZP_19839463.1| chaperone ClpB [Escherichia coli KTE66]
gi|432608476|ref|ZP_19844660.1| chaperone ClpB [Escherichia coli KTE67]
gi|432612566|ref|ZP_19848726.1| chaperone ClpB [Escherichia coli KTE72]
gi|432617786|ref|ZP_19853897.1| chaperone ClpB [Escherichia coli KTE75]
gi|432622822|ref|ZP_19858849.1| chaperone ClpB [Escherichia coli KTE76]
gi|432628214|ref|ZP_19864189.1| chaperone ClpB [Escherichia coli KTE77]
gi|432632352|ref|ZP_19868276.1| chaperone ClpB [Escherichia coli KTE80]
gi|432637831|ref|ZP_19873699.1| chaperone ClpB [Escherichia coli KTE81]
gi|432642068|ref|ZP_19877899.1| chaperone ClpB [Escherichia coli KTE83]
gi|432647119|ref|ZP_19882907.1| chaperone ClpB [Escherichia coli KTE86]
gi|432652117|ref|ZP_19887869.1| chaperone ClpB [Escherichia coli KTE87]
gi|432656755|ref|ZP_19892457.1| chaperone ClpB [Escherichia coli KTE93]
gi|432661801|ref|ZP_19897441.1| chaperone ClpB [Escherichia coli KTE111]
gi|432667016|ref|ZP_19902595.1| chaperone ClpB [Escherichia coli KTE116]
gi|432671693|ref|ZP_19907221.1| chaperone ClpB [Escherichia coli KTE119]
gi|432675714|ref|ZP_19911170.1| chaperone ClpB [Escherichia coli KTE142]
gi|432681202|ref|ZP_19916574.1| chaperone ClpB [Escherichia coli KTE143]
gi|432686415|ref|ZP_19921709.1| chaperone ClpB [Escherichia coli KTE156]
gi|432687799|ref|ZP_19923081.1| chaperone ClpB [Escherichia coli KTE161]
gi|432695402|ref|ZP_19930599.1| chaperone ClpB [Escherichia coli KTE162]
gi|432700023|ref|ZP_19935175.1| chaperone ClpB [Escherichia coli KTE169]
gi|432705369|ref|ZP_19940468.1| chaperone ClpB [Escherichia coli KTE171]
gi|432706863|ref|ZP_19941944.1| chaperone ClpB [Escherichia coli KTE6]
gi|432714328|ref|ZP_19949363.1| chaperone ClpB [Escherichia coli KTE8]
gi|432719738|ref|ZP_19954705.1| chaperone ClpB [Escherichia coli KTE9]
gi|432724058|ref|ZP_19958975.1| chaperone ClpB [Escherichia coli KTE17]
gi|432728640|ref|ZP_19963517.1| chaperone ClpB [Escherichia coli KTE18]
gi|432733331|ref|ZP_19968159.1| chaperone ClpB [Escherichia coli KTE45]
gi|432738082|ref|ZP_19972837.1| chaperone ClpB [Escherichia coli KTE42]
gi|432742324|ref|ZP_19977042.1| chaperone ClpB [Escherichia coli KTE23]
gi|432746588|ref|ZP_19981252.1| chaperone ClpB [Escherichia coli KTE43]
gi|432751038|ref|ZP_19985639.1| chaperone ClpB [Escherichia coli KTE29]
gi|432760418|ref|ZP_19994910.1| chaperone ClpB [Escherichia coli KTE46]
gi|432765952|ref|ZP_20000384.1| chaperone ClpB [Escherichia coli KTE48]
gi|432771542|ref|ZP_20005867.1| chaperone ClpB [Escherichia coli KTE50]
gi|432775671|ref|ZP_20009939.1| chaperone ClpB [Escherichia coli KTE54]
gi|432784507|ref|ZP_20018686.1| chaperone ClpB [Escherichia coli KTE63]
gi|432793784|ref|ZP_20027867.1| chaperone ClpB [Escherichia coli KTE78]
gi|432795283|ref|ZP_20029345.1| chaperone ClpB [Escherichia coli KTE79]
gi|432806777|ref|ZP_20040697.1| chaperone ClpB [Escherichia coli KTE91]
gi|432810271|ref|ZP_20044150.1| chaperone ClpB [Escherichia coli KTE101]
gi|432816317|ref|ZP_20050099.1| chaperone ClpB [Escherichia coli KTE115]
gi|432828237|ref|ZP_20061859.1| chaperone ClpB [Escherichia coli KTE135]
gi|432835543|ref|ZP_20069080.1| chaperone ClpB [Escherichia coli KTE136]
gi|432840383|ref|ZP_20073847.1| chaperone ClpB [Escherichia coli KTE140]
gi|432852575|ref|ZP_20082291.1| chaperone ClpB [Escherichia coli KTE144]
gi|432863617|ref|ZP_20087499.1| chaperone ClpB [Escherichia coli KTE146]
gi|432869988|ref|ZP_20090520.1| chaperone ClpB [Escherichia coli KTE147]
gi|432876455|ref|ZP_20094373.1| chaperone ClpB [Escherichia coli KTE154]
gi|432887649|ref|ZP_20101620.1| chaperone ClpB [Escherichia coli KTE158]
gi|432905953|ref|ZP_20114717.1| chaperone ClpB [Escherichia coli KTE194]
gi|432913821|ref|ZP_20119441.1| chaperone ClpB [Escherichia coli KTE190]
gi|432920561|ref|ZP_20124196.1| chaperone ClpB [Escherichia coli KTE173]
gi|432928158|ref|ZP_20129411.1| chaperone ClpB [Escherichia coli KTE175]
gi|432935499|ref|ZP_20134840.1| chaperone ClpB [Escherichia coli KTE184]
gi|432938973|ref|ZP_20137175.1| chaperone ClpB [Escherichia coli KTE183]
gi|432948540|ref|ZP_20143591.1| chaperone ClpB [Escherichia coli KTE196]
gi|432956173|ref|ZP_20147961.1| chaperone ClpB [Escherichia coli KTE197]
gi|432962917|ref|ZP_20152387.1| chaperone ClpB [Escherichia coli KTE202]
gi|432968667|ref|ZP_20157581.1| chaperone ClpB [Escherichia coli KTE203]
gi|432972748|ref|ZP_20161613.1| chaperone ClpB [Escherichia coli KTE207]
gi|432974744|ref|ZP_20163580.1| chaperone ClpB [Escherichia coli KTE209]
gi|432981962|ref|ZP_20170736.1| chaperone ClpB [Escherichia coli KTE211]
gi|432986307|ref|ZP_20175027.1| chaperone ClpB [Escherichia coli KTE215]
gi|432991689|ref|ZP_20180353.1| chaperone ClpB [Escherichia coli KTE217]
gi|432996299|ref|ZP_20184884.1| chaperone ClpB [Escherichia coli KTE218]
gi|433000870|ref|ZP_20189393.1| chaperone ClpB [Escherichia coli KTE223]
gi|433014869|ref|ZP_20203210.1| chaperone ClpB [Escherichia coli KTE104]
gi|433019661|ref|ZP_20207852.1| chaperone ClpB [Escherichia coli KTE105]
gi|433024443|ref|ZP_20212423.1| chaperone ClpB [Escherichia coli KTE106]
gi|433034423|ref|ZP_20222130.1| chaperone ClpB [Escherichia coli KTE112]
gi|433039594|ref|ZP_20227191.1| chaperone ClpB [Escherichia coli KTE113]
gi|433044141|ref|ZP_20231634.1| chaperone ClpB [Escherichia coli KTE117]
gi|433049008|ref|ZP_20236353.1| chaperone ClpB [Escherichia coli KTE120]
gi|433054235|ref|ZP_20241407.1| chaperone ClpB [Escherichia coli KTE122]
gi|433059078|ref|ZP_20246119.1| chaperone ClpB [Escherichia coli KTE124]
gi|433064032|ref|ZP_20250948.1| chaperone ClpB [Escherichia coli KTE125]
gi|433068881|ref|ZP_20255665.1| chaperone ClpB [Escherichia coli KTE128]
gi|433078767|ref|ZP_20265293.1| chaperone ClpB [Escherichia coli KTE131]
gi|433083503|ref|ZP_20269958.1| chaperone ClpB [Escherichia coli KTE133]
gi|433088277|ref|ZP_20274645.1| chaperone ClpB [Escherichia coli KTE137]
gi|433092963|ref|ZP_20279226.1| chaperone ClpB [Escherichia coli KTE138]
gi|433097404|ref|ZP_20283586.1| chaperone ClpB [Escherichia coli KTE139]
gi|433102131|ref|ZP_20288209.1| chaperone ClpB [Escherichia coli KTE145]
gi|433106848|ref|ZP_20292819.1| chaperone ClpB [Escherichia coli KTE148]
gi|433111824|ref|ZP_20297684.1| chaperone ClpB [Escherichia coli KTE150]
gi|433116482|ref|ZP_20302270.1| chaperone ClpB [Escherichia coli KTE153]
gi|433126152|ref|ZP_20311706.1| chaperone ClpB [Escherichia coli KTE160]
gi|433131132|ref|ZP_20316565.1| chaperone ClpB [Escherichia coli KTE163]
gi|433135799|ref|ZP_20321139.1| chaperone ClpB [Escherichia coli KTE166]
gi|433140220|ref|ZP_20325472.1| chaperone ClpB [Escherichia coli KTE167]
gi|433145192|ref|ZP_20330332.1| chaperone ClpB [Escherichia coli KTE168]
gi|433150138|ref|ZP_20335154.1| chaperone ClpB [Escherichia coli KTE174]
gi|433159637|ref|ZP_20344470.1| chaperone ClpB [Escherichia coli KTE177]
gi|433174494|ref|ZP_20359012.1| chaperone ClpB [Escherichia coli KTE232]
gi|433179426|ref|ZP_20363819.1| chaperone ClpB [Escherichia coli KTE82]
gi|433189331|ref|ZP_20373426.1| chaperone ClpB [Escherichia coli KTE88]
gi|433194648|ref|ZP_20378632.1| chaperone ClpB [Escherichia coli KTE90]
gi|433199300|ref|ZP_20383194.1| chaperone ClpB [Escherichia coli KTE94]
gi|433204261|ref|ZP_20388026.1| chaperone ClpB [Escherichia coli KTE95]
gi|433213500|ref|ZP_20397089.1| chaperone ClpB [Escherichia coli KTE99]
gi|433323021|ref|ZP_20400391.1| protein disaggregation chaperone [Escherichia coli J96]
gi|433327005|ref|ZP_20403638.1| protein disaggregation chaperone [Escherichia coli J96]
gi|442590621|ref|ZP_21009382.1| ClpB protein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|442599575|ref|ZP_21017288.1| ClpB protein [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|442604746|ref|ZP_21019590.1| ClpB protein [Escherichia coli Nissle 1917]
gi|443618647|ref|YP_007382503.1| protein disaggregation chaperone [Escherichia coli APEC O78]
gi|444926153|ref|ZP_21245453.1| ATP-dependent chaperone protein ClpB [Escherichia coli 09BKT078844]
gi|444931860|ref|ZP_21250904.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0814]
gi|444937311|ref|ZP_21256091.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0815]
gi|444942940|ref|ZP_21261461.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0816]
gi|444948426|ref|ZP_21266740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0839]
gi|444953971|ref|ZP_21272070.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0848]
gi|444959494|ref|ZP_21277350.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1753]
gi|444964602|ref|ZP_21282213.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1775]
gi|444970627|ref|ZP_21287993.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1793]
gi|444975912|ref|ZP_21293039.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1805]
gi|444981297|ref|ZP_21298211.1| ATP-dependent chaperone protein ClpB [Escherichia coli ATCC 700728]
gi|444986692|ref|ZP_21303476.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA11]
gi|444992006|ref|ZP_21308652.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA19]
gi|444997317|ref|ZP_21313817.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA13]
gi|445002889|ref|ZP_21319281.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA2]
gi|445008328|ref|ZP_21324570.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA47]
gi|445013419|ref|ZP_21329529.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA48]
gi|445019288|ref|ZP_21335256.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA8]
gi|445024702|ref|ZP_21340529.1| ATP-dependent chaperone protein ClpB [Escherichia coli 7.1982]
gi|445030078|ref|ZP_21345756.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1781]
gi|445035545|ref|ZP_21351080.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1762]
gi|445041170|ref|ZP_21356546.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA35]
gi|445046399|ref|ZP_21361652.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4880]
gi|445051913|ref|ZP_21366962.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0083]
gi|445057684|ref|ZP_21372545.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0670]
gi|450220041|ref|ZP_21896286.1| protein disaggregation chaperone [Escherichia coli O08]
gi|450247072|ref|ZP_21901086.1| protein disaggregation chaperone [Escherichia coli S17]
gi|452967749|ref|ZP_21965976.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EC4009]
gi|54036848|sp|P63284.1|CLPB_ECOLI RecName: Full=Chaperone protein ClpB; AltName: Full=Heat shock
protein F84.1
gi|54036849|sp|P63285.1|CLPB_ECO57 RecName: Full=Chaperone protein ClpB
gi|54036850|sp|P63286.1|CLPB_ECOL6 RecName: Full=Chaperone protein ClpB
gi|1788943|gb|AAC75641.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. MG1655]
gi|1799995|dbj|BAA16476.1| protein disaggregation chaperone [Escherichia coli str. K12 substr.
W3110]
gi|13362926|dbj|BAB36878.1| heat shock protein [Escherichia coli O157:H7 str. Sakai]
gi|73856628|gb|AAZ89335.1| heat shock protein [Shigella sonnei Ss046]
gi|81246456|gb|ABB67164.1| heat shock protein [Shigella boydii Sb227]
gi|110344347|gb|ABG70584.1| ClpB protein [Escherichia coli 536]
gi|157067748|gb|ABV07003.1| ATP-dependent chaperone protein ClpB [Escherichia coli HS]
gi|157080262|gb|ABV19970.1| ATP-dependent chaperone protein ClpB [Escherichia coli E24377A]
gi|169754057|gb|ACA76756.1| ATP-dependent chaperone ClpB [Escherichia coli ATCC 8739]
gi|169890032|gb|ACB03739.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. DH10B]
gi|170521698|gb|ACB19876.1| ATP-dependent chaperone protein ClpB [Escherichia coli SMS-3-5]
gi|187770676|gb|EDU34520.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4196]
gi|188014008|gb|EDU52130.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4113]
gi|188487823|gb|EDU62926.1| ATP-dependent chaperone protein ClpB [Escherichia coli 53638]
gi|189003333|gb|EDU72319.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4076]
gi|189354548|gb|EDU72967.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4401]
gi|189359601|gb|EDU78020.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4486]
gi|189367288|gb|EDU85704.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4501]
gi|189370894|gb|EDU89310.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC869]
gi|189376181|gb|EDU94597.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC508]
gi|190900892|gb|EDV60678.1| ATP-dependent chaperone protein ClpB [Escherichia coli B7A]
gi|190905142|gb|EDV64786.1| ATP-dependent chaperone protein ClpB [Escherichia coli F11]
gi|192929286|gb|EDV82895.1| ATP-dependent chaperone protein ClpB [Escherichia coli E22]
gi|194411789|gb|EDX28110.1| ATP-dependent chaperone protein ClpB [Escherichia coli B171]
gi|194421696|gb|EDX37705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 101-1]
gi|208725798|gb|EDZ75399.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4206]
gi|208734329|gb|EDZ83016.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4045]
gi|208739428|gb|EDZ87110.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4042]
gi|209159195|gb|ACI36628.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4115]
gi|209913328|dbj|BAG78402.1| ATP-dependent protease [Escherichia coli SE11]
gi|215266003|emb|CAS10414.1| protein disaggregation chaperone [Escherichia coli O127:H6 str.
E2348/69]
gi|217319111|gb|EEC27536.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str.
TW14588]
gi|218352949|emb|CAU98748.1| protein disaggregation chaperone [Escherichia coli 55989]
gi|218361940|emb|CAQ99542.1| protein disaggregation chaperone [Escherichia coli IAI1]
gi|218371090|emb|CAR18919.1| protein disaggregation chaperone [Escherichia coli IAI39]
gi|218428275|emb|CAR09200.2| protein disaggregation chaperone [Escherichia coli ED1a]
gi|218433191|emb|CAR14090.1| protein disaggregation chaperone [Escherichia coli UMN026]
gi|238863301|gb|ACR65299.1| protein disaggregation chaperone [Escherichia coli BW2952]
gi|242378188|emb|CAQ32963.1| ClpB chaperone [Escherichia coli BL21(DE3)]
gi|253323556|gb|ACT28158.1| ATP-dependent chaperone ClpB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974464|gb|ACT40135.1| protein disaggregation chaperone [Escherichia coli B str. REL606]
gi|253978631|gb|ACT44301.1| protein disaggregation chaperone [Escherichia coli BL21(DE3)]
gi|254593940|gb|ACT73301.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
TW14359]
gi|257755331|dbj|BAI26833.1| protein disaggregation chaperone ClpB [Escherichia coli O26:H11
str. 11368]
gi|257760421|dbj|BAI31918.1| protein disaggregation chaperone ClpB [Escherichia coli O103:H2
str. 12009]
gi|257765630|dbj|BAI37125.1| protein disaggregation chaperone ClpB [Escherichia coli O111:H-
str. 11128]
gi|260448332|gb|ACX38754.1| ATP-dependent chaperone ClpB [Escherichia coli DH1]
gi|281179640|dbj|BAI55970.1| ATP-dependent protease [Escherichia coli SE15]
gi|284922540|emb|CBG35627.1| chaperone (heat-shock protein F84.1) [Escherichia coli 042]
gi|299880532|gb|EFI88743.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 196-1]
gi|305854526|gb|EFM54964.1| protein disaggregation chaperone [Escherichia coli NC101]
gi|306905523|gb|EFN36057.1| ATP-dependent chaperone ClpB [Escherichia coli W]
gi|307554607|gb|ADN47382.1| ATP-dependent chaperone protein ClpB [Escherichia coli ABU 83972]
gi|309702974|emb|CBJ02305.1| chaperone (heat-shock protein F84.1) [Escherichia coli ETEC H10407]
gi|312289927|gb|EFR17815.1| ATP-dependent chaperone ClpB [Escherichia coli 2362-75]
gi|315061907|gb|ADT76234.1| protein disaggregation chaperone [Escherichia coli W]
gi|315137212|dbj|BAJ44371.1| heat shock protein [Escherichia coli DH1]
gi|315615333|gb|EFU95967.1| ATP-dependent chaperone ClpB [Escherichia coli 3431]
gi|320177085|gb|EFW52102.1| ClpB protein [Shigella dysenteriae CDC 74-1112]
gi|320182491|gb|EFW57385.1| ClpB protein [Shigella boydii ATCC 9905]
gi|320185012|gb|EFW59794.1| ClpB protein [Shigella flexneri CDC 796-83]
gi|320188931|gb|EFW63590.1| ClpB protein [Escherichia coli O157:H7 str. EC1212]
gi|320194759|gb|EFW69388.1| ClpB protein [Escherichia coli WV_060327]
gi|320198369|gb|EFW72971.1| ClpB protein [Escherichia coli EC4100B]
gi|320640776|gb|EFX10274.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
G5101]
gi|320646121|gb|EFX15066.1| protein disaggregation chaperone [Escherichia coli O157:H- str.
493-89]
gi|320651418|gb|EFX19819.1| protein disaggregation chaperone [Escherichia coli O157:H- str. H
2687]
gi|320657023|gb|EFX24846.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320662687|gb|EFX30031.1| protein disaggregation chaperone [Escherichia coli O55:H7 str. USDA
5905]
gi|320667504|gb|EFX34428.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
LSU-61]
gi|323156248|gb|EFZ42407.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa14]
gi|323177280|gb|EFZ62868.1| ATP-dependent chaperone ClpB [Escherichia coli OK1180]
gi|323184531|gb|EFZ69905.1| ATP-dependent chaperone ClpB [Escherichia coli OK1357]
gi|323377512|gb|ADX49780.1| ATP-dependent chaperone ClpB [Escherichia coli KO11FL]
gi|323935612|gb|EGB31932.1| ATP-dependent chaperone ClpB [Escherichia coli E1520]
gi|323941388|gb|EGB37572.1| ATP-dependent chaperone ClpB [Escherichia coli E482]
gi|323946279|gb|EGB42312.1| ATP-dependent chaperone ClpB [Escherichia coli H120]
gi|323960548|gb|EGB56177.1| ATP-dependent chaperone ClpB [Escherichia coli H489]
gi|323963902|gb|EGB59395.1| ATP-dependent chaperone ClpB [Escherichia coli M863]
gi|324120051|gb|EGC13927.1| ATP-dependent chaperone ClpB [Escherichia coli E1167]
gi|325496334|gb|EGC94193.1| protein disaggregation chaperone [Escherichia fergusonii ECD227]
gi|326344348|gb|EGD68106.1| ClpB protein [Escherichia coli O157:H7 str. 1125]
gi|326347717|gb|EGD71434.1| ClpB protein [Escherichia coli O157:H7 str. 1044]
gi|327252298|gb|EGE63970.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_7v]
gi|330912357|gb|EGH40867.1| ClpB protein [Escherichia coli AA86]
gi|331058616|gb|EGI30594.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA143]
gi|331063012|gb|EGI34925.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA271]
gi|331068775|gb|EGI40168.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA280]
gi|332344463|gb|AEE57797.1| ATP-dependent chaperone ClpB [Escherichia coli UMNK88]
gi|333001158|gb|EGK20728.1| ATP-dependent chaperone ClpB [Shigella flexneri K-272]
gi|333015796|gb|EGK35133.1| ATP-dependent chaperone ClpB [Shigella flexneri K-227]
gi|333970692|gb|AEG37497.1| ClpB protein [Escherichia coli NA114]
gi|339416185|gb|AEJ57857.1| ATP-dependent chaperone ClpB [Escherichia coli UMNF18]
gi|340733532|gb|EGR62663.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
01-09591]
gi|340739435|gb|EGR73670.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
LB226692]
gi|342364116|gb|EGU28218.1| protein disaggregation chaperone [Escherichia coli XH140A]
gi|344192237|gb|EGV46333.1| protein disaggregation chaperone [Escherichia coli XH001]
gi|345334599|gb|EGW67041.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_C165-02]
gi|345337104|gb|EGW69537.1| ATP-dependent chaperone ClpB [Escherichia coli 2534-86]
gi|345349284|gb|EGW81571.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_94C]
gi|345352423|gb|EGW84672.1| ATP-dependent chaperone ClpB [Escherichia coli 3030-1]
gi|345357537|gb|EGW89731.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_DG131-3]
gi|345361095|gb|EGW93256.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_EH250]
gi|345369763|gb|EGX01744.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_MHI813]
gi|345374492|gb|EGX06443.1| ATP-dependent chaperone ClpB [Escherichia coli G58-1]
gi|345386438|gb|EGX16271.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_S1191]
gi|345392748|gb|EGX22527.1| ATP-dependent chaperone ClpB [Escherichia coli TX1999]
gi|349739066|gb|AEQ13772.1| protein disaggregation chaperone [Escherichia coli O7:K1 str. CE10]
gi|354862441|gb|EHF22879.1| chaperone ClpB [Escherichia coli O104:H4 str. C236-11]
gi|354867725|gb|EHF28147.1| chaperone ClpB [Escherichia coli O104:H4 str. C227-11]
gi|354868123|gb|EHF28541.1| chaperone ClpB [Escherichia coli O104:H4 str. 04-8351]
gi|354873722|gb|EHF34099.1| chaperone ClpB [Escherichia coli O104:H4 str. 09-7901]
gi|354880406|gb|EHF40742.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-3677]
gi|354888530|gb|EHF48786.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4404]
gi|354892691|gb|EHF52897.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4522]
gi|354893758|gb|EHF53957.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354896838|gb|EHF57005.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4623]
gi|354898532|gb|EHF58686.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354912300|gb|EHF72301.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354915256|gb|EHF75236.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354917144|gb|EHF77113.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C4]
gi|359332897|dbj|BAL39344.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. MDS42]
gi|371592087|gb|EHN81009.1| chaperone ClpB [Escherichia coli H494]
gi|371606808|gb|EHN95399.1| chaperone ClpB [Escherichia coli E101]
gi|371615394|gb|EHO03800.1| chaperone ClpB [Escherichia coli B093]
gi|374359951|gb|AEZ41658.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
RM12579]
gi|375320531|gb|EHS66474.1| protein disaggregation chaperone [Escherichia coli O157:H43 str.
T22]
gi|377842710|gb|EHU07760.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1A]
gi|377842992|gb|EHU08035.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1C]
gi|377846545|gb|EHU11556.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1B]
gi|377855963|gb|EHU20825.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1D]
gi|377862695|gb|EHU27503.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2A]
gi|377876581|gb|EHU41181.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2C]
gi|377889074|gb|EHU53541.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2E]
gi|377894379|gb|EHU58801.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3A]
gi|377903360|gb|EHU67656.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3B]
gi|377903368|gb|EHU67661.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3D]
gi|377910932|gb|EHU75115.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3C]
gi|377911230|gb|EHU75404.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3E]
gi|377924761|gb|EHU88702.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4A]
gi|377926892|gb|EHU90819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3F]
gi|377935034|gb|EHU98857.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4B]
gi|377938729|gb|EHV02494.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4C]
gi|377941241|gb|EHV04985.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4D]
gi|377946132|gb|EHV09819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4E]
gi|377952146|gb|EHV15747.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4F]
gi|377965090|gb|EHV28518.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5B]
gi|377973637|gb|EHV36974.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5C]
gi|377974765|gb|EHV38091.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5D]
gi|377982172|gb|EHV45424.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5E]
gi|377991404|gb|EHV54555.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6B]
gi|377993350|gb|EHV56487.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6A]
gi|377995518|gb|EHV58634.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6C]
gi|378006522|gb|EHV69500.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6D]
gi|378015305|gb|EHV78202.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7A]
gi|378022804|gb|EHV85487.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7C]
gi|378027627|gb|EHV90253.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7D]
gi|378031946|gb|EHV94528.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7B]
gi|378039355|gb|EHW01848.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8A]
gi|378052270|gb|EHW14579.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8C]
gi|378052552|gb|EHW14856.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8B]
gi|378074646|gb|EHW36679.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8E]
gi|378076171|gb|EHW38183.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9B]
gi|378083065|gb|EHW45001.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9C]
gi|378093516|gb|EHW55322.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9E]
gi|378099275|gb|EHW60983.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10A]
gi|378104890|gb|EHW66542.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10B]
gi|378115525|gb|EHW77064.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10D]
gi|378128356|gb|EHW89738.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11A]
gi|378129125|gb|EHW90501.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10E]
gi|378130260|gb|EHW91628.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10F]
gi|378140640|gb|EHX01863.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11B]
gi|378147456|gb|EHX08603.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11D]
gi|378157016|gb|EHX18060.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11E]
gi|378164351|gb|EHX25297.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12B]
gi|378168579|gb|EHX29483.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12A]
gi|378168939|gb|EHX29840.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12C]
gi|378180553|gb|EHX41234.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12D]
gi|378185028|gb|EHX45660.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13A]
gi|378187001|gb|EHX47621.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12E]
gi|378215991|gb|EHX76281.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14A]
gi|378218075|gb|EHX78347.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14B]
gi|378227090|gb|EHX87267.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14C]
gi|378230377|gb|EHX90496.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14D]
gi|378236556|gb|EHX96601.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15A]
gi|378243815|gb|EHY03761.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15B]
gi|378252827|gb|EHY12705.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15D]
gi|378258568|gb|EHY18385.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15E]
gi|380347350|gb|EIA35638.1| protein disaggregation chaperone [Escherichia coli SCI-07]
gi|383104021|gb|AFG41530.1| Chaperone protein clpB [Escherichia coli P12b]
gi|383391992|gb|AFH16950.1| protein disaggregation chaperone [Escherichia coli KO11FL]
gi|383406171|gb|AFH12414.1| protein disaggregation chaperone [Escherichia coli W]
gi|384380825|gb|EIE38691.1| ATP-dependent chaperone protein ClpB [Escherichia coli J53]
gi|384470764|gb|EIE54862.1| protein disaggregation chaperone [Escherichia coli AI27]
gi|385537254|gb|EIF84136.1| chaperone ClpB [Escherichia coli M919]
gi|385707147|gb|EIG44179.1| chaperone ClpB [Escherichia coli H730]
gi|385711187|gb|EIG48147.1| chaperone ClpB [Escherichia coli B799]
gi|386121213|gb|EIG69830.1| chaperone ClpB [Escherichia sp. 4_1_40B]
gi|386140943|gb|EIG82095.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2741]
gi|386147873|gb|EIG94313.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0246]
gi|386153382|gb|EIH04671.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0588]
gi|386160309|gb|EIH22120.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2264]
gi|386167684|gb|EIH34200.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0497]
gi|386171607|gb|EIH43646.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0741]
gi|386177531|gb|EIH55010.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2608]
gi|386183017|gb|EIH65768.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0624]
gi|386192481|gb|EIH81205.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0522]
gi|386194077|gb|EIH88338.1| ATP-dependent chaperone protein ClpB [Escherichia coli JB1-95]
gi|386201951|gb|EII00942.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.154]
gi|386204519|gb|EII09030.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0959]
gi|386218201|gb|EII34684.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0967]
gi|386224215|gb|EII46558.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.3916]
gi|386227619|gb|EII54975.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.3884]
gi|386236503|gb|EII68479.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.4168]
gi|386254601|gb|EIJ04291.1| ATP-dependent chaperone protein ClpB [Escherichia coli B41]
gi|386256623|gb|EIJ12117.1| ATP-dependent chaperone protein ClpB [Escherichia coli 900105
(10e)]
gi|388334874|gb|EIL01454.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9534]
gi|388335556|gb|EIL02116.1| protein disaggregation chaperone [Escherichia coli O103:H2 str.
CVM9450]
gi|388336442|gb|EIL02985.1| protein disaggregation chaperone [Escherichia coli O103:H25 str.
CVM9340]
gi|388354959|gb|EIL19831.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9574]
gi|388361811|gb|EIL25885.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9570]
gi|388366891|gb|EIL30600.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9545]
gi|388368482|gb|EIL32113.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9942]
gi|388379915|gb|EIL42545.1| heat shock protein [Escherichia coli O26:H11 str. CVM10026]
gi|388397947|gb|EIL58901.1| protein disaggregation chaperone [Escherichia coli 541-15]
gi|388406100|gb|EIL66511.1| protein disaggregation chaperone [Escherichia coli 75]
gi|388408493|gb|EIL68837.1| protein disaggregation chaperone [Escherichia coli 576-1]
gi|388421160|gb|EIL80781.1| protein disaggregation chaperone [Escherichia coli CUMT8]
gi|390640873|gb|EIN20317.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1996]
gi|390642395|gb|EIN21793.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA517]
gi|390643356|gb|EIN22710.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA505]
gi|390659773|gb|EIN37521.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93-001]
gi|390661066|gb|EIN38738.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1985]
gi|390662860|gb|EIN40396.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1990]
gi|390676582|gb|EIN52672.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA3]
gi|390679827|gb|EIN55693.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA5]
gi|390683118|gb|EIN58832.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA9]
gi|390695597|gb|EIN70116.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA10]
gi|390700139|gb|EIN74460.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA15]
gi|390700597|gb|EIN74890.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA14]
gi|390713745|gb|EIN86673.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA22]
gi|390721880|gb|EIN94573.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA25]
gi|390723387|gb|EIN95983.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA24]
gi|390726355|gb|EIN98805.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA28]
gi|390741481|gb|EIO12548.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA31]
gi|390741941|gb|EIO12968.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA32]
gi|390744542|gb|EIO15398.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA33]
gi|390757407|gb|EIO26891.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA40]
gi|390766404|gb|EIO35526.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA41]
gi|390767719|gb|EIO36786.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA39]
gi|390768138|gb|EIO37181.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA42]
gi|390780798|gb|EIO48492.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW06591]
gi|390786853|gb|EIO54355.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10246]
gi|390789740|gb|EIO57184.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07945]
gi|390802310|gb|EIO69351.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW11039]
gi|390804600|gb|EIO71558.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09098]
gi|390807166|gb|EIO74068.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09109]
gi|390815319|gb|EIO81854.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10119]
gi|390825299|gb|EIO91234.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4203]
gi|390829325|gb|EIO94927.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09195]
gi|390830191|gb|EIO95751.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4196]
gi|390845553|gb|EIP09187.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14301]
gi|390845736|gb|EIP09363.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14313]
gi|390850018|gb|EIP13414.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4421]
gi|390870013|gb|EIP31586.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4402]
gi|390877881|gb|EIP38772.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4439]
gi|390883127|gb|EIP43584.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4436]
gi|390892599|gb|EIP52174.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4437]
gi|390895117|gb|EIP54598.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4448]
gi|390897356|gb|EIP56691.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1738]
gi|390907430|gb|EIP66293.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1734]
gi|390918506|gb|EIP76903.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1863]
gi|390919698|gb|EIP78023.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1845]
gi|391283665|gb|EIQ42280.1| ATP-dependent chaperone ClpB [Shigella sonnei 3233-85]
gi|391304571|gb|EIQ62380.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa12]
gi|394383682|gb|EJE61272.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9602]
gi|394384190|gb|EJE61757.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10224]
gi|394399883|gb|EJE75853.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9634]
gi|394400710|gb|EJE76622.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9553]
gi|394402890|gb|EJE78574.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10021]
gi|394408132|gb|EJE82854.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9455]
gi|394414750|gb|EJE88672.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10030]
gi|394420119|gb|EJE93671.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9952]
gi|397784398|gb|EJK95252.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_O31]
gi|397898400|gb|EJL14784.1| ATP-dependent chaperone ClpB [Shigella sonnei str. Moseley]
gi|404290464|gb|EEH71314.2| chaperone ClpB [Escherichia sp. 1_1_43]
gi|406776579|gb|AFS56003.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407053148|gb|AFS73199.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2011C-3493]
gi|407066522|gb|AFS87569.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408065418|gb|EKG99892.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA7]
gi|408066055|gb|EKH00519.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK920]
gi|408078498|gb|EKH12650.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA506]
gi|408082392|gb|EKH16375.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA507]
gi|408096980|gb|EKH29894.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1999]
gi|408103486|gb|EKH35832.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1997]
gi|408108044|gb|EKH40082.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE1487]
gi|408120379|gb|EKH51376.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK2001]
gi|408126922|gb|EKH57449.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA4]
gi|408137165|gb|EKH66879.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA23]
gi|408139500|gb|EKH69110.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA49]
gi|408145583|gb|EKH74742.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA45]
gi|408154477|gb|EKH82818.1| ATP-dependent chaperone protein ClpB [Escherichia coli TT12B]
gi|408159346|gb|EKH87418.1| ATP-dependent chaperone protein ClpB [Escherichia coli MA6]
gi|408163120|gb|EKH91000.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5905]
gi|408172759|gb|EKH99813.1| ATP-dependent chaperone protein ClpB [Escherichia coli CB7326]
gi|408179519|gb|EKI06179.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC96038]
gi|408182301|gb|EKI08817.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5412]
gi|408192674|gb|EKI18244.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW15901]
gi|408201192|gb|EKI26354.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW00353]
gi|408217080|gb|EKI41366.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA38]
gi|408226599|gb|EKI50233.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1735]
gi|408227563|gb|EKI51146.1| ATP-dependent chaperone protein ClpB [Escherichia coli N1]
gi|408241828|gb|EKI64439.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1737]
gi|408246116|gb|EKI68425.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1846]
gi|408254867|gb|EKI76335.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1847]
gi|408258402|gb|EKI79668.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1848]
gi|408264914|gb|EKI85679.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1849]
gi|408273621|gb|EKI93673.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1850]
gi|408276539|gb|EKI96438.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1856]
gi|408285691|gb|EKJ04683.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1862]
gi|408290482|gb|EKJ09195.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1864]
gi|408295458|gb|EKJ13772.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1865]
gi|408303668|gb|EKJ21122.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1868]
gi|408307246|gb|EKJ24589.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1866]
gi|408318093|gb|EKJ34309.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1869]
gi|408324292|gb|EKJ40226.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1870]
gi|408325685|gb|EKJ41541.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE098]
gi|408335945|gb|EKJ50755.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK523]
gi|408342856|gb|EKJ57270.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1288]
gi|408345643|gb|EKJ59958.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1304]
gi|408456596|gb|EKJ80409.1| protein disaggregation chaperone [Escherichia coli AD30]
gi|408545467|gb|EKK22897.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4870]
gi|408549014|gb|EKK26382.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.2239]
gi|408567358|gb|EKK43417.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0566]
gi|408568063|gb|EKK44102.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0569]
gi|408568197|gb|EKK44234.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0586]
gi|408578176|gb|EKK53705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0833]
gi|408580682|gb|EKK56069.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.2524]
gi|408590902|gb|EKK65363.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0869]
gi|408595822|gb|EKK70028.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.0221]
gi|408600548|gb|EKK74389.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0416]
gi|408612015|gb|EKK85363.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0821]
gi|412963953|emb|CCK47879.1| heat shock protein [Escherichia coli chi7122]
gi|412970446|emb|CCJ45092.1| heat shock protein [Escherichia coli]
gi|421936383|gb|EKT94047.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421939968|gb|EKT97456.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421944373|gb|EKU01633.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427204151|gb|EKV74434.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1042]
gi|427206034|gb|EKV76261.1| ATP-dependent chaperone protein ClpB [Escherichia coli 89.0511]
gi|427208023|gb|EKV78176.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1467]
gi|427220326|gb|EKV89252.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0091]
gi|427223700|gb|EKV92431.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.2281]
gi|427227468|gb|EKV96019.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0039]
gi|427241215|gb|EKW08657.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0056]
gi|427241593|gb|EKW09019.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0055]
gi|427245213|gb|EKW12509.1| ATP-dependent chaperone protein ClpB [Escherichia coli 94.0618]
gi|427260080|gb|EKW26078.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0183]
gi|427264041|gb|EKW29740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.1288]
gi|427275876|gb|EKW40469.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0428]
gi|427282427|gb|EKW46677.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0939]
gi|427291326|gb|EKW54740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0932]
gi|427298443|gb|EKW61445.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0107]
gi|427299919|gb|EKW62880.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0003]
gi|427311752|gb|EKW73928.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.1742]
gi|427314740|gb|EKW76771.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0007]
gi|427319003|gb|EKW80837.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0672]
gi|427327344|gb|EKW88737.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0678]
gi|427328670|gb|EKW90028.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0713]
gi|429253084|gb|EKY37580.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0109]
gi|429254795|gb|EKY39162.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0010]
gi|429348329|gb|EKY85099.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02092]
gi|429359075|gb|EKY95741.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02030]
gi|429361406|gb|EKY98061.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02093]
gi|429361713|gb|EKY98366.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02033-1]
gi|429364353|gb|EKZ00973.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02318]
gi|429375202|gb|EKZ11740.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02913]
gi|429376359|gb|EKZ12888.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02281]
gi|429378668|gb|EKZ15176.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03439]
gi|429379532|gb|EKZ16032.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03943]
gi|429390667|gb|EKZ27076.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-04080]
gi|429406135|gb|EKZ42396.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9990]
gi|429409054|gb|EKZ45285.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413384|gb|EKZ49571.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4987]
gi|429416528|gb|EKZ52683.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4984]
gi|429420238|gb|EKZ56368.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4986]
gi|429428129|gb|EKZ64208.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5604]
gi|429431551|gb|EKZ67598.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436661|gb|EKZ72677.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437565|gb|EKZ73568.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-6006]
gi|429447235|gb|EKZ83159.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451488|gb|EKZ87379.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9941]
gi|429456748|gb|EKZ92592.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0466]
gi|430874323|gb|ELB97880.1| chaperone ClpB [Escherichia coli KTE2]
gi|430883700|gb|ELC06674.1| chaperone ClpB [Escherichia coli KTE10]
gi|430897818|gb|ELC20012.1| chaperone ClpB [Escherichia coli KTE12]
gi|430905160|gb|ELC26835.1| chaperone ClpB [Escherichia coli KTE16]
gi|430906999|gb|ELC28503.1| chaperone ClpB [Escherichia coli KTE15]
gi|430914786|gb|ELC35881.1| chaperone ClpB [Escherichia coli KTE25]
gi|430924187|gb|ELC44909.1| chaperone ClpB [Escherichia coli KTE21]
gi|430924628|gb|ELC45313.1| chaperone ClpB [Escherichia coli KTE26]
gi|430928806|gb|ELC49337.1| chaperone ClpB [Escherichia coli KTE28]
gi|430934408|gb|ELC54770.1| chaperone ClpB [Escherichia coli KTE39]
gi|430938174|gb|ELC58417.1| chaperone ClpB [Escherichia coli KTE44]
gi|430943395|gb|ELC63508.1| chaperone ClpB [Escherichia coli KTE178]
gi|430954358|gb|ELC73230.1| chaperone ClpB [Escherichia coli KTE181]
gi|430962645|gb|ELC80502.1| chaperone ClpB [Escherichia coli KTE188]
gi|430965485|gb|ELC82903.1| chaperone ClpB [Escherichia coli KTE189]
gi|430973433|gb|ELC90401.1| chaperone ClpB [Escherichia coli KTE191]
gi|430979217|gb|ELC96003.1| chaperone ClpB [Escherichia coli KTE193]
gi|430981147|gb|ELC97879.1| chaperone ClpB [Escherichia coli KTE201]
gi|430988061|gb|ELD04562.1| chaperone ClpB [Escherichia coli KTE204]
gi|430996977|gb|ELD13245.1| chaperone ClpB [Escherichia coli KTE206]
gi|431004123|gb|ELD19351.1| chaperone ClpB [Escherichia coli KTE208]
gi|431015033|gb|ELD28592.1| chaperone ClpB [Escherichia coli KTE212]
gi|431019262|gb|ELD32664.1| chaperone ClpB [Escherichia coli KTE213]
gi|431023908|gb|ELD37103.1| chaperone ClpB [Escherichia coli KTE214]
gi|431027660|gb|ELD40717.1| chaperone ClpB [Escherichia coli KTE216]
gi|431037409|gb|ELD48392.1| chaperone ClpB [Escherichia coli KTE220]
gi|431041280|gb|ELD51811.1| chaperone ClpB [Escherichia coli KTE224]
gi|431050018|gb|ELD59777.1| chaperone ClpB [Escherichia coli KTE228]
gi|431050645|gb|ELD60384.1| chaperone ClpB [Escherichia coli KTE230]
gi|431059324|gb|ELD68682.1| chaperone ClpB [Escherichia coli KTE234]
gi|431062621|gb|ELD71885.1| chaperone ClpB [Escherichia coli KTE233]
gi|431068692|gb|ELD77166.1| chaperone ClpB [Escherichia coli KTE235]
gi|431073596|gb|ELD81238.1| chaperone ClpB [Escherichia coli KTE236]
gi|431078889|gb|ELD85868.1| chaperone ClpB [Escherichia coli KTE237]
gi|431082715|gb|ELD89027.1| chaperone ClpB [Escherichia coli KTE47]
gi|431090181|gb|ELD95951.1| chaperone ClpB [Escherichia coli KTE49]
gi|431092570|gb|ELD98261.1| chaperone ClpB [Escherichia coli KTE51]
gi|431098769|gb|ELE04075.1| chaperone ClpB [Escherichia coli KTE53]
gi|431114090|gb|ELE17642.1| chaperone ClpB [Escherichia coli KTE56]
gi|431126882|gb|ELE29223.1| chaperone ClpB [Escherichia coli KTE60]
gi|431137420|gb|ELE39267.1| chaperone ClpB [Escherichia coli KTE67]
gi|431140270|gb|ELE42044.1| chaperone ClpB [Escherichia coli KTE66]
gi|431147630|gb|ELE48984.1| chaperone ClpB [Escherichia coli KTE72]
gi|431152924|gb|ELE53844.1| chaperone ClpB [Escherichia coli KTE75]
gi|431158219|gb|ELE58837.1| chaperone ClpB [Escherichia coli KTE76]
gi|431162309|gb|ELE62759.1| chaperone ClpB [Escherichia coli KTE77]
gi|431169228|gb|ELE69449.1| chaperone ClpB [Escherichia coli KTE80]
gi|431169930|gb|ELE70144.1| chaperone ClpB [Escherichia coli KTE81]
gi|431179497|gb|ELE79397.1| chaperone ClpB [Escherichia coli KTE86]
gi|431180932|gb|ELE80808.1| chaperone ClpB [Escherichia coli KTE83]
gi|431189556|gb|ELE88977.1| chaperone ClpB [Escherichia coli KTE87]
gi|431189973|gb|ELE89389.1| chaperone ClpB [Escherichia coli KTE93]
gi|431198760|gb|ELE97543.1| chaperone ClpB [Escherichia coli KTE111]
gi|431199842|gb|ELE98569.1| chaperone ClpB [Escherichia coli KTE116]
gi|431209975|gb|ELF08042.1| chaperone ClpB [Escherichia coli KTE119]
gi|431213521|gb|ELF11395.1| chaperone ClpB [Escherichia coli KTE142]
gi|431219520|gb|ELF16916.1| chaperone ClpB [Escherichia coli KTE143]
gi|431220903|gb|ELF18232.1| chaperone ClpB [Escherichia coli KTE156]
gi|431233024|gb|ELF28622.1| chaperone ClpB [Escherichia coli KTE162]
gi|431238051|gb|ELF32991.1| chaperone ClpB [Escherichia coli KTE161]
gi|431242251|gb|ELF36672.1| chaperone ClpB [Escherichia coli KTE171]
gi|431242452|gb|ELF36869.1| chaperone ClpB [Escherichia coli KTE169]
gi|431255423|gb|ELF48676.1| chaperone ClpB [Escherichia coli KTE8]
gi|431256994|gb|ELF49924.1| chaperone ClpB [Escherichia coli KTE6]
gi|431261505|gb|ELF53539.1| chaperone ClpB [Escherichia coli KTE9]
gi|431264650|gb|ELF56355.1| chaperone ClpB [Escherichia coli KTE17]
gi|431272401|gb|ELF63503.1| chaperone ClpB [Escherichia coli KTE18]
gi|431274084|gb|ELF65148.1| chaperone ClpB [Escherichia coli KTE45]
gi|431280926|gb|ELF71834.1| chaperone ClpB [Escherichia coli KTE42]
gi|431282813|gb|ELF73687.1| chaperone ClpB [Escherichia coli KTE23]
gi|431290737|gb|ELF81268.1| chaperone ClpB [Escherichia coli KTE43]
gi|431295668|gb|ELF85401.1| chaperone ClpB [Escherichia coli KTE29]
gi|431306883|gb|ELF95185.1| chaperone ClpB [Escherichia coli KTE46]
gi|431309349|gb|ELF97549.1| chaperone ClpB [Escherichia coli KTE48]
gi|431314008|gb|ELG01963.1| chaperone ClpB [Escherichia coli KTE50]
gi|431317134|gb|ELG04916.1| chaperone ClpB [Escherichia coli KTE54]
gi|431328930|gb|ELG16234.1| chaperone ClpB [Escherichia coli KTE63]
gi|431338743|gb|ELG25819.1| chaperone ClpB [Escherichia coli KTE78]
gi|431350931|gb|ELG37732.1| chaperone ClpB [Escherichia coli KTE79]
gi|431354165|gb|ELG40904.1| chaperone ClpB [Escherichia coli KTE91]
gi|431361324|gb|ELG47915.1| chaperone ClpB [Escherichia coli KTE101]
gi|431363452|gb|ELG50013.1| chaperone ClpB [Escherichia coli KTE115]
gi|431384371|gb|ELG68427.1| chaperone ClpB [Escherichia coli KTE135]
gi|431384440|gb|ELG68492.1| chaperone ClpB [Escherichia coli KTE136]
gi|431387893|gb|ELG71698.1| chaperone ClpB [Escherichia coli KTE140]
gi|431399103|gb|ELG82515.1| chaperone ClpB [Escherichia coli KTE144]
gi|431403787|gb|ELG87053.1| chaperone ClpB [Escherichia coli KTE146]
gi|431409810|gb|ELG92980.1| chaperone ClpB [Escherichia coli KTE147]
gi|431415458|gb|ELG98000.1| chaperone ClpB [Escherichia coli KTE158]
gi|431419496|gb|ELH01845.1| chaperone ClpB [Escherichia coli KTE154]
gi|431431290|gb|ELH13067.1| chaperone ClpB [Escherichia coli KTE194]
gi|431438678|gb|ELH20051.1| chaperone ClpB [Escherichia coli KTE190]
gi|431441763|gb|ELH22871.1| chaperone ClpB [Escherichia coli KTE173]
gi|431443123|gb|ELH24201.1| chaperone ClpB [Escherichia coli KTE175]
gi|431452017|gb|ELH32468.1| chaperone ClpB [Escherichia coli KTE184]
gi|431456101|gb|ELH36446.1| chaperone ClpB [Escherichia coli KTE196]
gi|431462584|gb|ELH42794.1| chaperone ClpB [Escherichia coli KTE183]
gi|431466555|gb|ELH46574.1| chaperone ClpB [Escherichia coli KTE197]
gi|431470083|gb|ELH50007.1| chaperone ClpB [Escherichia coli KTE203]
gi|431472383|gb|ELH52272.1| chaperone ClpB [Escherichia coli KTE202]
gi|431480655|gb|ELH60373.1| chaperone ClpB [Escherichia coli KTE207]
gi|431487782|gb|ELH67425.1| chaperone ClpB [Escherichia coli KTE209]
gi|431490475|gb|ELH70087.1| chaperone ClpB [Escherichia coli KTE211]
gi|431495771|gb|ELH75357.1| chaperone ClpB [Escherichia coli KTE217]
gi|431498854|gb|ELH78038.1| chaperone ClpB [Escherichia coli KTE215]
gi|431504081|gb|ELH82811.1| chaperone ClpB [Escherichia coli KTE218]
gi|431507559|gb|ELH85843.1| chaperone ClpB [Escherichia coli KTE223]
gi|431529587|gb|ELI06285.1| chaperone ClpB [Escherichia coli KTE104]
gi|431529629|gb|ELI06325.1| chaperone ClpB [Escherichia coli KTE105]
gi|431534093|gb|ELI10582.1| chaperone ClpB [Escherichia coli KTE106]
gi|431549278|gb|ELI23361.1| chaperone ClpB [Escherichia coli KTE112]
gi|431550430|gb|ELI24422.1| chaperone ClpB [Escherichia coli KTE113]
gi|431555156|gb|ELI29012.1| chaperone ClpB [Escherichia coli KTE117]
gi|431563643|gb|ELI36847.1| chaperone ClpB [Escherichia coli KTE120]
gi|431568097|gb|ELI41086.1| chaperone ClpB [Escherichia coli KTE124]
gi|431569328|gb|ELI42282.1| chaperone ClpB [Escherichia coli KTE122]
gi|431580227|gb|ELI52791.1| chaperone ClpB [Escherichia coli KTE125]
gi|431582551|gb|ELI54569.1| chaperone ClpB [Escherichia coli KTE128]
gi|431595513|gb|ELI65507.1| chaperone ClpB [Escherichia coli KTE131]
gi|431600784|gb|ELI70450.1| chaperone ClpB [Escherichia coli KTE133]
gi|431603838|gb|ELI73259.1| chaperone ClpB [Escherichia coli KTE137]
gi|431609405|gb|ELI78727.1| chaperone ClpB [Escherichia coli KTE138]
gi|431614621|gb|ELI83761.1| chaperone ClpB [Escherichia coli KTE139]
gi|431617973|gb|ELI86956.1| chaperone ClpB [Escherichia coli KTE145]
gi|431625959|gb|ELI94512.1| chaperone ClpB [Escherichia coli KTE148]
gi|431627373|gb|ELI95780.1| chaperone ClpB [Escherichia coli KTE150]
gi|431632983|gb|ELJ01266.1| chaperone ClpB [Escherichia coli KTE153]
gi|431643348|gb|ELJ11045.1| chaperone ClpB [Escherichia coli KTE160]
gi|431645363|gb|ELJ12919.1| chaperone ClpB [Escherichia coli KTE163]
gi|431655297|gb|ELJ22331.1| chaperone ClpB [Escherichia coli KTE166]
gi|431658892|gb|ELJ25800.1| chaperone ClpB [Escherichia coli KTE167]
gi|431660628|gb|ELJ27496.1| chaperone ClpB [Escherichia coli KTE168]
gi|431669569|gb|ELJ35988.1| chaperone ClpB [Escherichia coli KTE174]
gi|431676528|gb|ELJ42645.1| chaperone ClpB [Escherichia coli KTE177]
gi|431690895|gb|ELJ56363.1| chaperone ClpB [Escherichia coli KTE232]
gi|431699970|gb|ELJ64958.1| chaperone ClpB [Escherichia coli KTE82]
gi|431704983|gb|ELJ69606.1| chaperone ClpB [Escherichia coli KTE88]
gi|431714776|gb|ELJ78953.1| chaperone ClpB [Escherichia coli KTE90]
gi|431719711|gb|ELJ83762.1| chaperone ClpB [Escherichia coli KTE95]
gi|431719928|gb|ELJ83964.1| chaperone ClpB [Escherichia coli KTE94]
gi|431733804|gb|ELJ97209.1| chaperone ClpB [Escherichia coli KTE99]
gi|432345136|gb|ELL39657.1| protein disaggregation chaperone [Escherichia coli J96]
gi|432348189|gb|ELL42640.1| protein disaggregation chaperone [Escherichia coli J96]
gi|441609076|emb|CCP95295.1| ClpB protein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441651585|emb|CCQ02785.1| ClpB protein [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|441714329|emb|CCQ05567.1| ClpB protein [Escherichia coli Nissle 1917]
gi|443423155|gb|AGC88059.1| protein disaggregation chaperone [Escherichia coli APEC O78]
gi|444537635|gb|ELV17552.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0814]
gi|444539174|gb|ELV18955.1| ATP-dependent chaperone protein ClpB [Escherichia coli 09BKT078844]
gi|444547063|gb|ELV25699.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0815]
gi|444556894|gb|ELV34271.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0839]
gi|444557506|gb|ELV34839.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0816]
gi|444562805|gb|ELV39846.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0848]
gi|444572407|gb|ELV48836.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1753]
gi|444576359|gb|ELV52545.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1775]
gi|444578805|gb|ELV54837.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1793]
gi|444592734|gb|ELV67980.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA11]
gi|444592782|gb|ELV68023.1| ATP-dependent chaperone protein ClpB [Escherichia coli ATCC 700728]
gi|444594598|gb|ELV69763.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1805]
gi|444605840|gb|ELV80470.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA13]
gi|444606504|gb|ELV81116.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA19]
gi|444615131|gb|ELV89343.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA2]
gi|444622501|gb|ELV96453.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA47]
gi|444623394|gb|ELV97316.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA48]
gi|444629157|gb|ELW02870.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA8]
gi|444637976|gb|ELW11332.1| ATP-dependent chaperone protein ClpB [Escherichia coli 7.1982]
gi|444640430|gb|ELW13694.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1781]
gi|444644716|gb|ELW17818.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1762]
gi|444653791|gb|ELW26495.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA35]
gi|444659179|gb|ELW31606.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4880]
gi|444663627|gb|ELW35842.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0083]
gi|444669329|gb|ELW41316.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0670]
gi|449316769|gb|EMD06874.1| protein disaggregation chaperone [Escherichia coli O08]
gi|449318506|gb|EMD08572.1| protein disaggregation chaperone [Escherichia coli S17]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|429105773|ref|ZP_19167642.1| ClpB protein [Cronobacter malonaticus 681]
gi|429111337|ref|ZP_19173107.1| ClpB protein [Cronobacter malonaticus 507]
gi|426292496|emb|CCJ93755.1| ClpB protein [Cronobacter malonaticus 681]
gi|426312494|emb|CCJ99220.1| ClpB protein [Cronobacter malonaticus 507]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 535/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NDELADKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +++I SIA IQL L +L + IS
Sbjct: 739 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAVHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 799 ALQLLGENGYDPVYGAR 815
>gi|417708677|ref|ZP_12357705.1| ATP-dependent chaperone ClpB [Shigella flexneri VA-6]
gi|420332545|ref|ZP_14834195.1| ATP-dependent chaperone ClpB [Shigella flexneri K-1770]
gi|332999364|gb|EGK18949.1| ATP-dependent chaperone ClpB [Shigella flexneri VA-6]
gi|391249376|gb|EIQ08611.1| ATP-dependent chaperone ClpB [Shigella flexneri K-1770]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|331654052|ref|ZP_08355052.1| ATP-dependent chaperone protein ClpB [Escherichia coli M718]
gi|331047434|gb|EGI19511.1| ATP-dependent chaperone protein ClpB [Escherichia coli M718]
Length = 861
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 509 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 743 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSENGYDPVYGAR 819
>gi|157148104|ref|YP_001455423.1| protein disaggregation chaperone [Citrobacter koseri ATCC BAA-895]
gi|157085309|gb|ABV14987.1| hypothetical protein CKO_03914 [Citrobacter koseri ATCC BAA-895]
Length = 861
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/709 (58%), Positives = 556/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ L+KYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALQKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 509 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 743 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDD 802
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 803 ALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 843
>gi|366161829|ref|ZP_09461691.1| protein disaggregation chaperone [Escherichia sp. TW09308]
gi|432373208|ref|ZP_19616246.1| chaperone ClpB [Escherichia coli KTE11]
gi|430895214|gb|ELC17485.1| chaperone ClpB [Escherichia coli KTE11]
Length = 857
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYARMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|415845853|ref|ZP_11525254.1| ATP-dependent chaperone ClpB [Shigella sonnei 53G]
gi|417582098|ref|ZP_12232899.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_B2F1]
gi|417756847|ref|ZP_12404920.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2B]
gi|418041510|ref|ZP_12679732.1| protein disaggregation chaperone [Escherichia coli W26]
gi|419019520|ref|ZP_13566825.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1E]
gi|419035734|ref|ZP_13582819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2D]
gi|419115980|ref|ZP_13660995.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5A]
gi|419403099|ref|ZP_13943819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15C]
gi|420327113|ref|ZP_14828859.1| ATP-dependent chaperone ClpB [Shigella flexneri CCH060]
gi|420354031|ref|ZP_14855128.1| ATP-dependent chaperone ClpB [Shigella boydii 4444-74]
gi|420364479|ref|ZP_14865357.1| ATP-dependent chaperone ClpB [Shigella sonnei 4822-66]
gi|420392397|ref|ZP_14891648.1| ATP-dependent chaperone ClpB [Escherichia coli EPEC C342-62]
gi|323167772|gb|EFZ53467.1| ATP-dependent chaperone ClpB [Shigella sonnei 53G]
gi|345335555|gb|EGW67992.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_B2F1]
gi|377859211|gb|EHU24045.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1E]
gi|377873032|gb|EHU37672.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2B]
gi|377878905|gb|EHU43484.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2D]
gi|377959332|gb|EHV22828.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5A]
gi|378245354|gb|EHY05291.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15C]
gi|383475594|gb|EID67551.1| protein disaggregation chaperone [Escherichia coli W26]
gi|391248417|gb|EIQ07658.1| ATP-dependent chaperone ClpB [Shigella flexneri CCH060]
gi|391277052|gb|EIQ35812.1| ATP-dependent chaperone ClpB [Shigella boydii 4444-74]
gi|391293394|gb|EIQ51676.1| ATP-dependent chaperone ClpB [Shigella sonnei 4822-66]
gi|391312164|gb|EIQ69787.1| ATP-dependent chaperone ClpB [Escherichia coli EPEC C342-62]
Length = 823
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 111 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 291 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 411 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 471 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 525 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 585 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 705 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 765 ALKLLSENGYDPVYGAR 781
>gi|449473904|ref|XP_004154017.1| PREDICTED: chaperone protein ClpB-like [Cucumis sativus]
Length = 861
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALNKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELDEKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ Q +I + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 509 KIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 743 DLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDD 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSENGYDPVYGAR 819
>gi|418257812|ref|ZP_12881289.1| ATP-dependent chaperone ClpB [Shigella flexneri 6603-63]
gi|397896131|gb|EJL12551.1| ATP-dependent chaperone ClpB [Shigella flexneri 6603-63]
Length = 823
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 111 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 291 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 411 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 471 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 525 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 585 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 705 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 765 ALKLLSENGYDPVYGAR 781
>gi|418514455|ref|ZP_13080660.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366079129|gb|EHN43118.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
Length = 857
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSANGYDPVYGAR 815
>gi|419244574|ref|ZP_13787210.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
gi|378089111|gb|EHW50958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
Length = 857
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|432481938|ref|ZP_19723893.1| chaperone ClpB [Escherichia coli KTE210]
gi|431006460|gb|ELD21466.1| chaperone ClpB [Escherichia coli KTE210]
Length = 857
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|30063993|ref|NP_838164.1| protein disaggregation chaperone [Shigella flexneri 2a str. 2457T]
gi|110806537|ref|YP_690057.1| protein disaggregation chaperone [Shigella flexneri 5 str. 8401]
gi|384544218|ref|YP_005728281.1| Chaperone protein clpB [Shigella flexneri 2002017]
gi|415857540|ref|ZP_11532240.1| ATP-dependent chaperone ClpB [Shigella flexneri 2a str. 2457T]
gi|417704449|ref|ZP_12353544.1| ATP-dependent chaperone ClpB [Shigella flexneri K-218]
gi|417724281|ref|ZP_12373083.1| ATP-dependent chaperone ClpB [Shigella flexneri K-304]
gi|417734715|ref|ZP_12383363.1| ATP-dependent chaperone ClpB [Shigella flexneri 2747-71]
gi|417739488|ref|ZP_12388064.1| ATP-dependent chaperone ClpB [Shigella flexneri 4343-70]
gi|424838928|ref|ZP_18263565.1| protein disaggregation chaperone [Shigella flexneri 5a str. M90T]
gi|30042249|gb|AAP17974.1| heat shock protein [Shigella flexneri 2a str. 2457T]
gi|110616085|gb|ABF04752.1| heat shock protein [Shigella flexneri 5 str. 8401]
gi|281602004|gb|ADA74988.1| Chaperone protein clpB [Shigella flexneri 2002017]
gi|313648272|gb|EFS12716.1| ATP-dependent chaperone ClpB [Shigella flexneri 2a str. 2457T]
gi|332753866|gb|EGJ84243.1| ATP-dependent chaperone ClpB [Shigella flexneri 4343-70]
gi|332755659|gb|EGJ86022.1| ATP-dependent chaperone ClpB [Shigella flexneri 2747-71]
gi|332997821|gb|EGK17431.1| ATP-dependent chaperone ClpB [Shigella flexneri K-218]
gi|333015833|gb|EGK35169.1| ATP-dependent chaperone ClpB [Shigella flexneri K-304]
gi|383467980|gb|EID63001.1| protein disaggregation chaperone [Shigella flexneri 5a str. M90T]
Length = 857
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|429101412|ref|ZP_19163386.1| ClpB protein [Cronobacter turicensis 564]
gi|426288061|emb|CCJ89499.1| ClpB protein [Cronobacter turicensis 564]
Length = 857
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 536/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPDLEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +++I SIA IQL L +L + IS
Sbjct: 739 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAMHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 799 ALQLLGENGYDPVYGAR 815
>gi|238897711|ref|YP_002923390.1| ATP-dependent protease, Hsp 100 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|229465468|gb|ACQ67242.1| ATP-dependent protease, Hsp 100 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 857
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/717 (57%), Positives = 558/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
+G N+ Q E+H LKK+TIDLTE+A KLDPVIGRD+EIRRAIQVLQRR+KNNPVL
Sbjct: 145 SGDNVNDQGAEDHRQALKKFTIDLTERAEQSKLDPVIGRDEEIRRAIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG KYRGEFE+RLK +LK
Sbjct: 205 IGAPGVGKTAIVEGLAQRIVNGEVPEGLKKKRVLSLDMGALLAGAKYRGEFEERLKGVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQGGSVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYI+DR
Sbjct: 325 KDPALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAASLSQRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +DKLERR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAAASIRMQIDSKPEALDKLERRIIQLKLEQQALNKEQDEASKKRLKML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ K E +Y+ LE+ WK EK + +Q IK ++E+ ++ + +A R SD +S+++YG
Sbjct: 445 NDELEKKERQYSELEEEWKAEKASLTGTQNIKAQLEEAKITLEQARRVSDLAKMSEMQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L+ ++K++ + LL+ +V EIAE+++R TGIPV ++++ EREK
Sbjct: 505 KIPALEKQLQAATEKEM------SSMKLLRNRVTDIEIAEVLARWTGIPVDRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L ++V+GQ+EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEENLHQQVIGQNEAVIAVSNALRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYE+GGYLTE VRR+PYS++LLDE
Sbjct: 619 AYFLFSSKDAMVRIDMSEFMEKHTVSRLLGAPPGYVGYEQGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHQDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFSQADYSDMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V+ YFRPEFINRID+++VF L +++ SIA IQL L +L + I+ +
Sbjct: 739 KSVMEVVRRYFRPEFINRIDEVVVFHPLEAQHLESIAQIQLKQLYQRLEEKGYTAGITPS 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL ++ G+D +YGAR + K+++ + ++P A I G LI P LD
Sbjct: 799 ALGFLTKEGYDPVYGARPL---KRAIQQEI-----ENPLAQQILSGQLIPGMPIVLD 847
>gi|15803116|ref|NP_289147.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EDL933]
gi|26248955|ref|NP_754995.1| protein disaggregation chaperone [Escherichia coli CFT073]
gi|227888159|ref|ZP_04005964.1| endopeptidase Clp [Escherichia coli 83972]
gi|291283865|ref|YP_003500683.1| heat shock protein [Escherichia coli O55:H7 str. CB9615]
gi|293406102|ref|ZP_06650028.1| disaggregation chaperone [Escherichia coli FVEC1412]
gi|293415865|ref|ZP_06658505.1| ATP-dependent chaperone ClpB [Escherichia coli B185]
gi|293448944|ref|ZP_06663365.1| ATP-dependent chaperone ClpB [Escherichia coli B088]
gi|298381834|ref|ZP_06991431.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Escherichia
coli FVEC1302]
gi|300819934|ref|ZP_07100117.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 107-1]
gi|300900222|ref|ZP_07118408.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 198-1]
gi|300905088|ref|ZP_07122895.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 84-1]
gi|300921136|ref|ZP_07137517.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 115-1]
gi|300922524|ref|ZP_07138633.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 182-1]
gi|300930683|ref|ZP_07146067.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 187-1]
gi|300940371|ref|ZP_07154959.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 21-1]
gi|300948986|ref|ZP_07163042.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 116-1]
gi|300957375|ref|ZP_07169592.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 175-1]
gi|300976570|ref|ZP_07173522.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 200-1]
gi|300986851|ref|ZP_07177834.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 45-1]
gi|301026352|ref|ZP_07189800.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 69-1]
gi|301050461|ref|ZP_07197343.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 185-1]
gi|301305762|ref|ZP_07211849.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 124-1]
gi|301326708|ref|ZP_07220026.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 78-1]
gi|301644034|ref|ZP_07244052.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 146-1]
gi|309794105|ref|ZP_07688529.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 145-7]
gi|331643309|ref|ZP_08344440.1| ATP-dependent chaperone protein ClpB [Escherichia coli H736]
gi|331648336|ref|ZP_08349424.1| ATP-dependent chaperone protein ClpB [Escherichia coli M605]
gi|331678586|ref|ZP_08379260.1| ATP-dependent chaperone protein ClpB [Escherichia coli H591]
gi|332280712|ref|ZP_08393125.1| heat shock protein [Shigella sp. D9]
gi|386630361|ref|YP_006150081.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i2']
gi|386635281|ref|YP_006155000.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i14']
gi|387883785|ref|YP_006314087.1| protein disaggregation chaperone [Escherichia coli Xuzhou21]
gi|415866944|ref|ZP_11539240.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 85-1]
gi|415877635|ref|ZP_11543747.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 79-10]
gi|422355470|ref|ZP_16436185.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 117-3]
gi|422366379|ref|ZP_16446851.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 153-1]
gi|422376237|ref|ZP_16456489.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 60-1]
gi|422382964|ref|ZP_16463116.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 57-2]
gi|25289895|pir||E85905 heat shock protein [imported] - Escherichia coli (strain O157:H7,
substrain EDL933)
gi|12517013|gb|AAG57705.1|AE005489_4 heat shock protein [Escherichia coli O157:H7 str. EDL933]
gi|26109361|gb|AAN81563.1|AE016764_245 ClpB protein [Escherichia coli CFT073]
gi|209762698|gb|ACI79661.1| heat shock protein [Escherichia coli]
gi|209762700|gb|ACI79662.1| heat shock protein [Escherichia coli]
gi|209762702|gb|ACI79663.1| heat shock protein [Escherichia coli]
gi|209762704|gb|ACI79664.1| heat shock protein [Escherichia coli]
gi|209762706|gb|ACI79665.1| heat shock protein [Escherichia coli]
gi|227834799|gb|EEJ45265.1| endopeptidase Clp [Escherichia coli 83972]
gi|290763738|gb|ADD57699.1| Heat shock protein [Escherichia coli O55:H7 str. CB9615]
gi|291322034|gb|EFE61463.1| ATP-dependent chaperone ClpB [Escherichia coli B088]
gi|291426108|gb|EFE99140.1| disaggregation chaperone [Escherichia coli FVEC1412]
gi|291432054|gb|EFF05036.1| ATP-dependent chaperone ClpB [Escherichia coli B185]
gi|298276974|gb|EFI18490.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Escherichia
coli FVEC1302]
gi|300297832|gb|EFJ54217.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 185-1]
gi|300308512|gb|EFJ63032.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 200-1]
gi|300315878|gb|EFJ65662.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 175-1]
gi|300356257|gb|EFJ72127.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 198-1]
gi|300395567|gb|EFJ79105.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 69-1]
gi|300403015|gb|EFJ86553.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 84-1]
gi|300407861|gb|EFJ91399.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 45-1]
gi|300411909|gb|EFJ95219.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 115-1]
gi|300421136|gb|EFK04447.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 182-1]
gi|300451543|gb|EFK15163.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 116-1]
gi|300454825|gb|EFK18318.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 21-1]
gi|300461457|gb|EFK24950.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 187-1]
gi|300527522|gb|EFK48584.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 107-1]
gi|300839016|gb|EFK66776.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 124-1]
gi|300846631|gb|EFK74391.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 78-1]
gi|301077608|gb|EFK92414.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 146-1]
gi|308122010|gb|EFO59272.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 145-7]
gi|315253120|gb|EFU33088.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 85-1]
gi|315290939|gb|EFU50304.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 153-1]
gi|324005832|gb|EGB75051.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 57-2]
gi|324012458|gb|EGB81677.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 60-1]
gi|324016581|gb|EGB85800.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 117-3]
gi|331036780|gb|EGI09004.1| ATP-dependent chaperone protein ClpB [Escherichia coli H736]
gi|331042083|gb|EGI14225.1| ATP-dependent chaperone protein ClpB [Escherichia coli M605]
gi|331073416|gb|EGI44737.1| ATP-dependent chaperone protein ClpB [Escherichia coli H591]
gi|332103064|gb|EGJ06410.1| heat shock protein [Shigella sp. D9]
gi|342927877|gb|EGU96599.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 79-10]
gi|355421260|gb|AER85457.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i2']
gi|355426180|gb|AER90376.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i14']
gi|386797243|gb|AFJ30277.1| protein disaggregation chaperone [Escherichia coli Xuzhou21]
Length = 861
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 509 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 743 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSENGYDPVYGAR 819
>gi|334125226|ref|ZP_08499217.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
gi|333387301|gb|EGK58501.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
Length = 861
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALNKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELDEKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ Q +I + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 509 KIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 743 DLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDD 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSANGYDPVYGAR 819
>gi|117619764|ref|YP_858496.1| ATP-dependent chaperone protein ClpB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561171|gb|ABK38119.1| ATP-dependent chaperone protein ClpB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 857
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/677 (59%), Positives = 547/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
GK + EE+ L+KYTIDLTE+A +GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGKKVEDANAEENRQALEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 DLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+EI++ + +Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG
Sbjct: 445 NQEISEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 RIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDQLHSRVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M + FRPEFINRID+ +VF L ++I SIA IQL L +L ++++S+A
Sbjct: 739 GMLMEVLTRSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMGRLEAQGYEVEVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
L+K+ + GFD +YGAR
Sbjct: 799 LLEKLVHAGFDPVYGAR 815
>gi|417744471|ref|ZP_12392995.1| ATP-dependent chaperone ClpB [Shigella flexneri 2930-71]
gi|420342987|ref|ZP_14844456.1| ATP-dependent chaperone ClpB [Shigella flexneri K-404]
gi|420374583|ref|ZP_14874550.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
gi|332765573|gb|EGJ95786.1| ATP-dependent chaperone ClpB [Shigella flexneri 2930-71]
gi|391264802|gb|EIQ23787.1| ATP-dependent chaperone ClpB [Shigella flexneri K-404]
gi|391316101|gb|EIQ73582.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
Length = 798
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 86 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 145
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 146 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 205
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 206 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 265
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 266 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 325
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 326 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 385
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 386 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 445
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 446 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 499
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 500 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 559
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 560 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 619
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 620 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 679
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 680 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 739
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 740 ALKLLSENGYDPVYGAR 756
>gi|415811834|ref|ZP_11504147.1| ATP-dependent chaperone ClpB [Escherichia coli LT-68]
gi|417239377|ref|ZP_12036393.1| ATP-dependent chaperone protein ClpB [Escherichia coli 9.0111]
gi|417278141|ref|ZP_12065457.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2303]
gi|417624590|ref|ZP_12274887.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_H.1.8]
gi|417673475|ref|ZP_12322927.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 155-74]
gi|417683458|ref|ZP_12332805.1| ATP-dependent chaperone ClpB [Shigella boydii 3594-74]
gi|417829028|ref|ZP_12475576.1| ATP-dependent chaperone ClpB [Shigella flexneri J1713]
gi|419166727|ref|ZP_13711175.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6E]
gi|419216869|ref|ZP_13759866.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8D]
gi|419224608|ref|ZP_13767506.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9A]
gi|419266272|ref|ZP_13808641.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10C]
gi|419303539|ref|ZP_13845514.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11C]
gi|419350701|ref|ZP_13892036.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13B]
gi|419356154|ref|ZP_13897407.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13C]
gi|419361218|ref|ZP_13902434.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13D]
gi|419366349|ref|ZP_13907507.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13E]
gi|419813247|ref|ZP_14338100.1| protein disaggregation chaperone [Escherichia coli O32:H37 str. P4]
gi|420348871|ref|ZP_14850253.1| ATP-dependent chaperone ClpB [Shigella boydii 965-58]
gi|420361393|ref|ZP_14862332.1| ATP-dependent chaperone ClpB [Shigella sonnei 3226-85]
gi|420381868|ref|ZP_14881308.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 225-75]
gi|421683751|ref|ZP_16123542.1| ATP-dependent chaperone ClpB [Shigella flexneri 1485-80]
gi|424533509|ref|ZP_17976866.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4422]
gi|424540920|ref|ZP_17983849.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4013]
gi|425111332|ref|ZP_18513257.1| ATP-dependent chaperone protein ClpB [Escherichia coli 6.0172]
gi|425157267|ref|ZP_18556537.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA34]
gi|425175429|ref|ZP_18573554.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA504]
gi|425200975|ref|ZP_18597189.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE037]
gi|425289734|ref|ZP_18680570.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3006]
gi|425301446|ref|ZP_18691335.1| ATP-dependent chaperone protein ClpB [Escherichia coli 07798]
gi|425318562|ref|ZP_18707358.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1736]
gi|429015806|ref|ZP_19082708.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0943]
gi|429027740|ref|ZP_19093752.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0427]
gi|323173093|gb|EFZ58724.1| ATP-dependent chaperone ClpB [Escherichia coli LT-68]
gi|332089246|gb|EGI94353.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 155-74]
gi|332091986|gb|EGI97064.1| ATP-dependent chaperone ClpB [Shigella boydii 3594-74]
gi|335574327|gb|EGM60653.1| ATP-dependent chaperone ClpB [Shigella flexneri J1713]
gi|345376356|gb|EGX08294.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_H.1.8]
gi|378006469|gb|EHV69452.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6E]
gi|378060300|gb|EHW22496.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8D]
gi|378084050|gb|EHW45977.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9A]
gi|378115045|gb|EHW76594.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10C]
gi|378143617|gb|EHX04808.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11C]
gi|378199027|gb|EHX59495.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13C]
gi|378199229|gb|EHX59695.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13B]
gi|378202339|gb|EHX62777.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13D]
gi|378211840|gb|EHX72173.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13E]
gi|385153935|gb|EIF15958.1| protein disaggregation chaperone [Escherichia coli O32:H37 str. P4]
gi|386213111|gb|EII23544.1| ATP-dependent chaperone protein ClpB [Escherichia coli 9.0111]
gi|386239109|gb|EII76043.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2303]
gi|390860758|gb|EIP23050.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4422]
gi|390862609|gb|EIP24785.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4013]
gi|391267912|gb|EIQ26843.1| ATP-dependent chaperone ClpB [Shigella boydii 965-58]
gi|391277116|gb|EIQ35872.1| ATP-dependent chaperone ClpB [Shigella sonnei 3226-85]
gi|391299375|gb|EIQ57339.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 225-75]
gi|404337631|gb|EJZ64082.1| ATP-dependent chaperone ClpB [Shigella flexneri 1485-80]
gi|408069291|gb|EKH03682.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA34]
gi|408090876|gb|EKH24129.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA504]
gi|408114538|gb|EKH46076.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE037]
gi|408212539|gb|EKI37061.1| ATP-dependent chaperone protein ClpB [Escherichia coli 07798]
gi|408212633|gb|EKI37150.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3006]
gi|408237828|gb|EKI60673.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1736]
gi|408550250|gb|EKK27588.1| ATP-dependent chaperone protein ClpB [Escherichia coli 6.0172]
gi|427260741|gb|EKW26705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0943]
gi|427278327|gb|EKW42792.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0427]
Length = 798
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 86 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 145
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 146 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 205
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 206 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 265
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 266 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 325
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 326 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 385
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 386 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 445
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 446 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 499
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 500 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 559
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 560 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 619
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 620 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 679
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 680 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 739
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 740 ALKLLSENGYDPVYGAR 756
>gi|161615589|ref|YP_001589554.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161364953|gb|ABX68721.1| hypothetical protein SPAB_03370 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 820
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 108 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 167
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 168 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 227
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 228 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 287
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 288 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 347
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 348 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 407
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 408 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 467
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 468 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 521
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 522 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 581
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 582 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 641
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 642 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 701
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 702 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 761
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 762 ALKLLSANGYDPVYGAR 778
>gi|300825131|ref|ZP_07105224.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 119-7]
gi|300522403|gb|EFK43472.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 119-7]
Length = 861
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELSDKEHQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 509 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 743 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSENGYDPVYGAR 819
>gi|336246710|ref|YP_004590420.1| protein disaggregation chaperone [Enterobacter aerogenes KCTC 2190]
gi|334732766|gb|AEG95141.1| protein disaggregation chaperone [Enterobacter aerogenes KCTC 2190]
Length = 857
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKEADEASLKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKESQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRLGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQDLHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S
Sbjct: 739 DLVLGVVSQRFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHMSDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|213424878|ref|ZP_03357628.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|417424063|ref|ZP_12160358.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353617828|gb|EHC68696.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
Length = 798
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 86 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 145
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 146 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 205
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 206 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 265
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 266 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 325
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 326 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 385
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 386 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 445
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 446 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREK 499
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 500 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 559
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 560 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 619
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 620 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 679
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 680 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 739
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 740 ALKLLSANGYDPVYGAR 756
>gi|312973164|ref|ZP_07787337.1| ATP-dependent chaperone ClpB [Escherichia coli 1827-70]
gi|310333106|gb|EFQ00320.1| ATP-dependent chaperone ClpB [Escherichia coli 1827-70]
Length = 798
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 86 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 145
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 146 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 205
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 206 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 265
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 266 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 325
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 326 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 385
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 386 NEELSDKERQYSELEEEWKTEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 445
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 446 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 499
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 500 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 559
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 560 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 619
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 620 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 679
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 680 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 739
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 740 ALKLLSENGYDPVYGAR 756
>gi|218547885|ref|YP_002381676.1| protein disaggregation chaperone [Escherichia fergusonii ATCC
35469]
gi|422807810|ref|ZP_16856238.1| ATP-dependent chaperone ClpB [Escherichia fergusonii B253]
gi|218355426|emb|CAQ88034.1| protein disaggregation chaperone [Escherichia fergusonii ATCC
35469]
gi|324111233|gb|EGC05215.1| ATP-dependent chaperone ClpB [Escherichia fergusonii B253]
Length = 857
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|56460289|ref|YP_155570.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina loihiensis L2TR]
gi|56179299|gb|AAV82021.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina loihiensis L2TR]
Length = 857
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/692 (59%), Positives = 540/692 (78%), Gaps = 13/692 (1%)
Query: 2 GIKNNSLN------VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
GIK ++L +G+ + E+ L KYTIDLTE+A GKLDPVIGRD+EIRR
Sbjct: 130 GIKRDALEKAINDIRDGEKVDDPNAEDKRQALDKYTIDLTERAEQGKLDPVIGRDEEIRR 189
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
IQVLQRR+KNNPVLIG+PGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG
Sbjct: 190 TIQVLQRRTKNNPVLIGDPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDLGALLAGA 249
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
K+RGEFE+RLK +L E+S + II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELH
Sbjct: 250 KFRGEFEERLKAVLTELSKEEGRIILFIDEMHTMVGAGKADGAMDAGNMLKPALARGELH 309
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
C+GATTL+EYRQYIEKDAA ERRFQK+LVEEP++E+TI+ILRGL+++YE+HH VEITDPA
Sbjct: 310 CVGATTLDEYRQYIEKDAALERRFQKVLVEEPNVEDTIAILRGLKERYELHHSVEITDPA 369
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ LS+RYISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+
Sbjct: 370 IVAAASLSHRYISDRKLPDKAIDLIDEAASSIRMQIDSKPEDLDRLERRIIQLKLERQAL 429
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
++E D++SKKRL ++ E+++ E KY LE++W EK ++ +Q IK ++E+ R ++ A
Sbjct: 430 QKEKDDASKKRLEILHDELDEQERKYEELEEVWNTEKAAVQGTQHIKAQLEQARTDMDIA 489
Query: 356 TRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRT 415
R D +S+L+YG + +LER Q D+ L +LLK +V EEIA+++SR
Sbjct: 490 RRAGDLNRMSELQYGRIPELER------QLDLALQAEMQDMSLLKNRVTEEEIADVLSRW 543
Query: 416 TGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMF 475
TGIPV+++++ EREKLL++E + RVVGQ+EA+ AVSNAIRRSR+GL D RP GSF+F
Sbjct: 544 TGIPVNRMLEGEREKLLHMEEQIHSRVVGQNEAVEAVSNAIRRSRAGLGDPNRPIGSFLF 603
Query: 476 LGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLT 535
LGPTGVGKTEL K L+ +F+ + +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLT
Sbjct: 604 LGPTGVGKTELSKALANFMFDTDHAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLT 663
Query: 536 EIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSD 595
E VRRKPYS+ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD
Sbjct: 664 EAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSD 723
Query: 596 KIKEMEKGDK-EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILK 654
I+E K E +K VM + +FRPEFINR+D+ +VF L I SIA QL +L
Sbjct: 724 LIQEHAKEHTYEQMKAEVMEVLAHHFRPEFINRVDETVVFHPLGESEIRSIAQFQLQLLY 783
Query: 655 NKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+L + L++ AL ++ GFD ++GAR
Sbjct: 784 KRLEDKDYQLELDDKALSHLARTGFDPVFGAR 815
>gi|423141231|ref|ZP_17128869.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379050403|gb|EHY68295.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 823
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 111 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 291 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 411 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 471 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 525 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 585 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 705 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 765 ALKLLSANGYDPVYGAR 781
>gi|422780508|ref|ZP_16833293.1| ATP-dependent chaperone ClpB [Escherichia coli TW10509]
gi|323978455|gb|EGB73539.1| ATP-dependent chaperone ClpB [Escherichia coli TW10509]
Length = 857
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHITSIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|87122250|ref|ZP_01078133.1| endopeptidase Clp ATP-binding chain B (ClpB) [Marinomonas sp.
MED121]
gi|86162570|gb|EAQ63852.1| endopeptidase Clp ATP-binding chain B (ClpB) [Marinomonas sp.
MED121]
Length = 859
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 538/677 (79%), Gaps = 6/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L K+T+DLT +A G+LDPVIGRDDEIRR IQVLQRR KNNPVL
Sbjct: 145 GGEGVNDPNAEESRQALDKFTVDLTARAAEGQLDPVIGRDDEIRRTIQVLQRRRKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRI+NGEVP L +K++L LD+A L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIVNGEVPEGLKNKRVLSLDMAALIAGAKYRGEFEERLKSLLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDE+HTM+G GK EGS+DAGNMLKP LSRGELHC+GATTL+EYRQ+IE
Sbjct: 265 ELSKQEGQIILFIDEIHTMVGAGKSEGSMDAGNMLKPALSRGELHCVGATTLDEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP + +TI+ILRGL+++YE+HHGV+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVADTIAILRGLKERYEIHHGVDITDSAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA ++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D +SK+RL +
Sbjct: 385 QLPDKAIDLIDEAGSRIRMEMDSKPEDMDRLERRLIQLKIEKEALKKEKDRASKQRLSKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I E ++++LE+IW EK ++ +Q++KEE+E VR ++ +A R + +S+L+YG
Sbjct: 445 EADIAIAEKQFSDLEEIWNAEKAQLQGAQKLKEELESVRQEMEEARRDGNLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE +++ S + ++ LL+ +V EE+A +VSR TGIPV K++Q EREK
Sbjct: 505 VIPMLEAEIEKAS-----MAEELDQTQLLRNRVSEEEVATVVSRWTGIPVDKMLQGEREK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +EN L V+GQ+EA++AV+NA+RRSRSGL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 560 LLTMENELHASVIGQEEAVTAVANAVRRSRSGLADPNRPNGSFLFLGPTGVGKTELCKSL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E S++R+DMSEF+EKHS++RLIG+PPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 620 ATFLFDTEASMVRVDMSEFMEKHSVARLIGSPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+ ++ E IK
Sbjct: 680 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQNYRSNEQYEEIK 739
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V +FRPEFINRID+ +VF L + I IA IQ+ L +L +M M L +S+
Sbjct: 740 HDVLAVVGNHFRPEFINRIDETVVFHPLMQSQIHGIARIQMTHLNGRLQEMGMTLALSEQ 799
Query: 670 ALKKISNIGFDLIYGAR 686
AL +++ +G+D +YGAR
Sbjct: 800 ALDRLAEVGYDPVYGAR 816
>gi|209694256|ref|YP_002262184.1| chaperone ClpB (heat-shock protein) [Aliivibrio salmonicida
LFI1238]
gi|208008207|emb|CAQ78351.1| chaperone ClpB (heat-shock protein) [Aliivibrio salmonicida
LFI1238]
Length = 861
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/680 (61%), Positives = 544/680 (80%), Gaps = 13/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGEKVNDPNAEEKRQALEKFTIDLTEQAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG+PGVGKTAIVEGLAQRIINGEVP L K++L LDI L+AG K+RGEFE+RLK +L
Sbjct: 205 IGQPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDIGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RG+LHC+GATTL+EYR+YIE
Sbjct: 265 ELAKEEGNIILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGDLHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVIVDEPTVEDTIAILRGLKERYEIHHHVEITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +DKLER++IQLKIE +A+ +E D++S KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPESLDKLERKIIQLKIEQQALVKESDDASLKRLDSL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E Y+ LE+IWK EK + +Q IK E++ R ++ A R D +S+L+YG
Sbjct: 445 NLELREKERDYSELEEIWKAEKAALSGTQHIKTELDIARSNMDIARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LLK KV EIAE++SR TGIPV+K+++ ER+K
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVNKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLKMEAMLHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EMEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+KI+ E++ G
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEKIQQHFGELDYGG-- 736
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
IK VM+ V +FRPEF+NR+D+ +VF L ++NI SIA IQL L+ +L + + LK+
Sbjct: 737 -IKELVMDVVGQHFRPEFLNRVDEAVVFHPLGQENIKSIAKIQLQRLEKRLNEKDYQLKV 795
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AL IS GFD +YGAR
Sbjct: 796 SNEALTLISEAGFDPVYGAR 815
>gi|187733901|ref|YP_001881380.1| protein disaggregation chaperone [Shigella boydii CDC 3083-94]
gi|187430893|gb|ACD10167.1| ATP-dependent chaperone protein ClpB [Shigella boydii CDC 3083-94]
Length = 857
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIYISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|271501677|ref|YP_003334703.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech586]
gi|270345232|gb|ACZ77997.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech586]
Length = 857
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/717 (57%), Positives = 559/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQQVNDQSAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 KLPDKAIDLIDEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG
Sbjct: 445 NSELEQKEREYSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLAAATQAE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + ++
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEMNYAQMR 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V +FRPEFINRID+++VF L + +I SIA IQL L ++ + + IS A
Sbjct: 739 DMVLGVVSHHFRPEFINRIDEVVVFHPLGQAHITSIAQIQLQRLYKRMEERGYTVSISDA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ ++ ++P A I G L+ +LD
Sbjct: 799 ALELLGKSGFDPVYGARPL---KRAIQQMI-----ENPLAQQILSGALVPGKAVTLD 847
>gi|445275841|ref|ZP_21410580.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|444887455|gb|ELY11153.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 832
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 120 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 179
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 180 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 239
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 240 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 299
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 300 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 359
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 360 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 419
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 420 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 479
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 480 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 533
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 534 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 593
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 594 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 653
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 654 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 713
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 714 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 773
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 774 ALKLLSANGYDPVYGAR 790
>gi|444355311|ref|YP_007391455.1| ClpB protein [Enterobacter aerogenes EA1509E]
gi|443906141|emb|CCG33915.1| ClpB protein [Enterobacter aerogenes EA1509E]
Length = 812
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 100 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 159
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 160 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 219
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 220 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 279
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 280 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 339
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 340 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKEADEASLKRLDML 399
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 400 NEELADKESQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRLGDLARMSELQYG 459
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 460 KIPELEKQLAAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREK 513
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 514 LLRMEQDLHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 573
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 574 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 633
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 634 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 693
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S
Sbjct: 694 DLVLGVVSQRFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHMSDE 753
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 754 ALKLLSENGYDPVYGAR 770
>gi|161502241|ref|YP_001569353.1| protein disaggregation chaperone [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160863588|gb|ABX20211.1| hypothetical protein SARI_00266 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 861
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 509 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I +IA IQL L +L + ++ IS
Sbjct: 743 EMVLGVVGHNFRPEFINRIDEVVVFHPLGEQHIAAIAQIQLQRLYKRLEERGYEIHISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSANGYDPVYGAR 819
>gi|417140198|ref|ZP_11983448.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0259]
gi|417311067|ref|ZP_12097861.1| Chaperone protein ClpB [Escherichia coli PCN033]
gi|417690778|ref|ZP_12339998.1| ATP-dependent chaperone ClpB [Shigella boydii 5216-82]
gi|332088101|gb|EGI93226.1| ATP-dependent chaperone ClpB [Shigella boydii 5216-82]
gi|338767303|gb|EGP22129.1| Chaperone protein ClpB [Escherichia coli PCN033]
gi|386156321|gb|EIH12666.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0259]
Length = 857
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEVATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|415840105|ref|ZP_11521621.1| ATP-dependent chaperone ClpB [Escherichia coli RN587/1]
gi|323188385|gb|EFZ73676.1| ATP-dependent chaperone ClpB [Escherichia coli RN587/1]
Length = 823
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 111 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP + +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINGEVPEGVKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 291 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLARRIIQLKLEQQALMKESDEASKKRLDML 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 411 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 471 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 525 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 585 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 705 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 765 ALKLLSENGYDPVYGAR 781
>gi|419960229|ref|ZP_14476273.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae GS1]
gi|388604901|gb|EIM34127.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae GS1]
Length = 857
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/677 (59%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALNKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDEKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ Q +I + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 739 DLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|417282105|ref|ZP_12069405.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3003]
gi|386246434|gb|EII88164.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3003]
Length = 857
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP + +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGVKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLARRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|440229579|ref|YP_007343372.1| ATP-dependent chaperone ClpB [Serratia marcescens FGI94]
gi|440051284|gb|AGB81187.1| ATP-dependent chaperone ClpB [Serratia marcescens FGI94]
Length = 857
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/717 (57%), Positives = 562/717 (78%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDSVEDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 STELEQKEREYSELEEEWKAEKASLSGTQTIKAELEQAKISLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIAE++++ TGIPV+++++ ER+K
Sbjct: 505 KIPDLEKQLAAATQ------SEGKTMKLLRNRVTDAEIAEVLAKATGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+SAVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V +FRPEFINRID+++VF L +K+I +IA IQL+ L +L + ++ I++
Sbjct: 739 ESVMEMVGHHFRPEFINRIDEVVVFHPLGQKHIAAIAKIQLDRLYQRLEERGYEVTITEP 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + G+D +YGAR + K+++ + ++P A I G+L+ P +LD
Sbjct: 799 ALELLGKTGYDPVYGARPL---KRAIQQEI-----ENPLAQQILSGELVPGKPVTLD 847
>gi|197335143|ref|YP_002155324.1| ATP-dependent chaperone ClpB [Vibrio fischeri MJ11]
gi|423685282|ref|ZP_17660090.1| ATP-dependent chaperone ClpB [Vibrio fischeri SR5]
gi|197316633|gb|ACH66080.1| ATP-dependent chaperone ClpB [Vibrio fischeri MJ11]
gi|371495783|gb|EHN71378.1| ATP-dependent chaperone ClpB [Vibrio fischeri SR5]
Length = 861
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/680 (60%), Positives = 544/680 (80%), Gaps = 13/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGEKVNDQNAEEKRQALEKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG+PGVGKTAIVEGLAQRIINGEVP L +K++L LDI L+AG K+RGEFE+RLK +L
Sbjct: 205 IGQPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDIGALVAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGSVILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTVAILRGLKERYEIHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +DKL+R++IQLKIE +A+ +E D++S KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPESLDKLDRKIIQLKIEQQALVKESDDASLKRLDSL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +YA LE++WK EK + +Q IK E+E R + A R D +S+L+YG
Sbjct: 445 NLELMQKEREYAELEEVWKAEKAALSGTQHIKTELETARSNMEIARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LLK KV EIAE++SR TGIPV+K+++ ER+K
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVNKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLKMEEVLHHRVIGQAEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EMEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+KI+ E+ G
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEKIQQHFGELNYGG-- 736
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
IK VM+ V +FRPEF+NR+D+ +VF L +++I +IA+IQL L+ +L + + L++
Sbjct: 737 -IKEIVMDVVSQHFRPEFLNRVDETVVFHPLAQEHIKNIASIQLQRLEKRLNEKDYQLQV 795
Query: 667 SKAALKKISNIGFDLIYGAR 686
+ AL I+ GFD +YGAR
Sbjct: 796 TDEALNLIAEAGFDPVYGAR 815
>gi|417385010|ref|ZP_12150193.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353607067|gb|EHC61103.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
Length = 798
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 86 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 145
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 146 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 205
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 206 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 265
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 266 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 325
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 326 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 385
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 386 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 445
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 446 KIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 499
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 500 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 559
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 560 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 619
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 620 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMK 679
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 680 EMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDE 739
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 740 ALKLLSANGYDPVYGAR 756
>gi|398801707|ref|ZP_10560945.1| ATP-dependent chaperone ClpB [Pantoea sp. GM01]
gi|398091391|gb|EJL81836.1| ATP-dependent chaperone ClpB [Pantoea sp. GM01]
Length = 857
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVNDQGAEDQRQALKKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQMDSKPESLDRLERRIIQLKLEQQALKKESDDASLKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+++ E +YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG
Sbjct: 445 ESELDQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLTMEQARRVGDLGQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAIATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHARVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLDYPEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINRIDD++VF L K+I SIA IQL L ++L + L IS+A
Sbjct: 739 EVVMTVVGQHFRPEFINRIDDMVVFHPLGEKHIASIAQIQLQRLYHRLEERGYQLHISEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK + G+D +YGAR
Sbjct: 799 ALKLLGENGYDPVYGAR 815
>gi|59711173|ref|YP_203949.1| protein disaggregation chaperone [Vibrio fischeri ES114]
gi|59479274|gb|AAW85061.1| protein disaggregation chaperone [Vibrio fischeri ES114]
Length = 861
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 544/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGEKVNDQNAEEKRQALEKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG+PGVGKTAIVEGLAQRIINGEVP L +K++L LDI L+AG K+RGEFE+RLK +L
Sbjct: 205 IGQPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDIGALVAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGSVILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTVAILRGLKERYEIHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +DKL+R++IQLKIE +A+ +E D++S KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRMEIDSKPESLDKLDRKIIQLKIEQQALVKESDDASLKRLDSL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +YA LE++WK EK + +Q IK E+E R + A R D +S+L+YG
Sbjct: 445 NLELMQKEREYAELEEVWKAEKAALSGTQHIKTELETARSNMEIARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LLK KV EIAE++SR TGIPV+K+++ ER+K
Sbjct: 505 RIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVNKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLKMEEVLHHRVIGQAEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 ANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+KI++ + + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEKIQQHFGELNYAGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L +++I +IA+IQL L+ +L + + L+++
Sbjct: 739 EVVMDVVSQHFRPEFLNRVDETVVFHPLAQEHIKNIASIQLQRLEKRLNEKDYQLQVTDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ GFD +YGAR
Sbjct: 799 ALNLIAEAGFDPVYGAR 815
>gi|251788635|ref|YP_003003356.1| protein disaggregation chaperone [Dickeya zeae Ech1591]
gi|247537256|gb|ACT05877.1| ATP-dependent chaperone ClpB [Dickeya zeae Ech1591]
Length = 857
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/717 (57%), Positives = 560/717 (78%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQQVNDQSAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 KLPDKAIDLIDEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG
Sbjct: 445 NAELEQKEREYSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLAAATQAE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + ++
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEMNYSQMR 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V +FRPEFINRID+++VF L + +I SIA IQL L ++ + + IS A
Sbjct: 739 DMVLGIVSHHFRPEFINRIDEVVVFHPLGQSHITSIAQIQLQRLYKRMEERGYTVSISDA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ ++ ++P A I G L+ +LD
Sbjct: 799 ALELLGKSGFDPVYGARPL---KRAIQQMI-----ENPLAQKILSGALVPGKSVTLD 847
>gi|261493173|ref|ZP_05989704.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261495905|ref|ZP_05992327.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261308426|gb|EEY09707.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311176|gb|EEY12348.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 855
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/678 (59%), Positives = 551/678 (81%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGETVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+IWK EK+ + +Q IK E+E R+ +++A R++D++ +S+L+YG
Sbjct: 443 DEEMAAKEREYSELEEIWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMSELQYG 502
Query: 371 ELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
+ LE+ L+ E +K NA+ LL+TKV EEIAE++S+ TGIPV+K+++ E+
Sbjct: 503 VIPNLEKQLQAVENGEK------NADA-QLLRTKVTEEEIAEVLSKATGIPVAKMMEGEK 555
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
EKLL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTEL K
Sbjct: 556 EKLLRMEEVLHARVIGQNEAVDAVTNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSK 615
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
TL+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR PYS++LL
Sbjct: 616 TLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLL 675
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E +++
Sbjct: 676 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYKGYDVV 735
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+ ++F L +++I SIA IQL L +L + ++ ++
Sbjct: 736 KEMVMEVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTD 795
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I GFD ++GAR
Sbjct: 796 AALDHIGKAGFDPLFGAR 813
>gi|440757483|ref|ZP_20936668.1| ClpB protein [Pantoea agglomerans 299R]
gi|436428729|gb|ELP26381.1| ClpB protein [Pantoea agglomerans 299R]
Length = 857
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 537/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPGVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +YA LE WK EK + +Q IK E+E+ RL + +A R+ D +S+L+YG
Sbjct: 445 ETELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ E +K
Sbjct: 505 KIPALEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGELDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLSYPEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NRID+++VF L K+I SIA IQL L +L + L IS
Sbjct: 739 DIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+K ++ G+D +YGAR
Sbjct: 799 AIKLLAENGYDPVYGAR 815
>gi|145297344|ref|YP_001140185.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida A449]
gi|418362096|ref|ZP_12962740.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|142850116|gb|ABO88437.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida A449]
gi|356686731|gb|EHI51324.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 545/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE+ L+KYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGRKIDDANAEENRQALEKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 265 DLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL LI
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLDLI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
KEI + + +Y L+++WK EK + +Q IK +E+ R ++ A R D +S+L+YG
Sbjct: 445 SKEIGEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 RIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDKLHSRVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E + D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M + FRPEFINRID+ +VF L +I SIA IQL L +L ++++S+A
Sbjct: 739 ALLMEVLTRSFRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEVEVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
L+K+ + GFD +YGAR
Sbjct: 799 LLEKLVHAGFDPVYGAR 815
>gi|420338046|ref|ZP_14839608.1| ATP-dependent chaperone ClpB [Shigella flexneri K-315]
gi|391259920|gb|EIQ18994.1| ATP-dependent chaperone ClpB [Shigella flexneri K-315]
Length = 823
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 111 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 291 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 411 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 471 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 525 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 585 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 705 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
LK +S G+D +YGAR
Sbjct: 765 VLKLLSENGYDPVYGAR 781
>gi|421495516|ref|ZP_15942797.1| ATP-dependent chaperone protein ClpB [Aeromonas media WS]
gi|407185455|gb|EKE59231.1| ATP-dependent chaperone protein ClpB [Aeromonas media WS]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
GK I EE+ L+KYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGKKIDDANAEENRQALEKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG PGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 DLAKEEGNVILFVDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL L+
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLDLL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y LE++WK EK + +Q IK +E+ R + A R D +S+L+YG
Sbjct: 445 NHELAEKEREYNELEEVWKAEKAALAGTQHIKAALEQARQDLEVARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + +LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 RIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHYAEKDYEEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M + FRPEFINRID+ +VF L +I SIA IQL L +L ++++S+
Sbjct: 739 ALLMELLTRSFRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEVEVSEE 798
Query: 670 ALKKISNIGFDLIYGAR 686
L K+ + GFD +YGAR
Sbjct: 799 LLTKLVHAGFDPVYGAR 815
>gi|91211926|ref|YP_541912.1| protein disaggregation chaperone [Escherichia coli UTI89]
gi|117624816|ref|YP_853729.1| protein disaggregation chaperone [Escherichia coli APEC O1]
gi|237706819|ref|ZP_04537300.1| heat shock protein [Escherichia sp. 3_2_53FAA]
gi|422361379|ref|ZP_16442005.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 110-3]
gi|91073500|gb|ABE08381.1| heat shock protein [Escherichia coli UTI89]
gi|115513940|gb|ABJ02015.1| heat shock protein [Escherichia coli APEC O1]
gi|226899859|gb|EEH86118.1| heat shock protein [Escherichia sp. 3_2_53FAA]
gi|315284809|gb|EFU44254.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 110-3]
Length = 861
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 509 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 743 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
LK +S G+D +YGAR
Sbjct: 803 VLKLLSENGYDPVYGAR 819
>gi|82778016|ref|YP_404365.1| protein disaggregation chaperone [Shigella dysenteriae Sd197]
gi|309789454|ref|ZP_07684040.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
gi|81242164|gb|ABB62874.1| heat shock protein [Shigella dysenteriae Sd197]
gi|308922697|gb|EFP68218.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIV A+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVVAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|419927010|ref|ZP_14444753.1| protein disaggregation chaperone [Escherichia coli 541-1]
gi|388408436|gb|EIL68782.1| protein disaggregation chaperone [Escherichia coli 541-1]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ VSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDVVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|218559513|ref|YP_002392426.1| protein disaggregation chaperone [Escherichia coli S88]
gi|386600563|ref|YP_006102069.1| ATP-dependent chaperone protein ClpB [Escherichia coli IHE3034]
gi|386603372|ref|YP_006109672.1| protein disaggregation chaperone [Escherichia coli UM146]
gi|417086020|ref|ZP_11953301.1| protein disaggregation chaperone [Escherichia coli cloneA_i1]
gi|419944842|ref|ZP_14461312.1| protein disaggregation chaperone [Escherichia coli HM605]
gi|422750407|ref|ZP_16804318.1| ATP-dependent chaperone ClpB [Escherichia coli H252]
gi|422754665|ref|ZP_16808491.1| ATP-dependent chaperone ClpB [Escherichia coli H263]
gi|422840557|ref|ZP_16888527.1| chaperone ClpB [Escherichia coli H397]
gi|432358930|ref|ZP_19602149.1| chaperone ClpB [Escherichia coli KTE4]
gi|432363690|ref|ZP_19606853.1| chaperone ClpB [Escherichia coli KTE5]
gi|432575473|ref|ZP_19811946.1| chaperone ClpB [Escherichia coli KTE55]
gi|432588871|ref|ZP_19825226.1| chaperone ClpB [Escherichia coli KTE58]
gi|432598715|ref|ZP_19834988.1| chaperone ClpB [Escherichia coli KTE62]
gi|432755423|ref|ZP_19989970.1| chaperone ClpB [Escherichia coli KTE22]
gi|432779502|ref|ZP_20013725.1| chaperone ClpB [Escherichia coli KTE59]
gi|432788495|ref|ZP_20022624.1| chaperone ClpB [Escherichia coli KTE65]
gi|432821941|ref|ZP_20055631.1| chaperone ClpB [Escherichia coli KTE118]
gi|432823429|ref|ZP_20057112.1| chaperone ClpB [Escherichia coli KTE123]
gi|433006053|ref|ZP_20194480.1| chaperone ClpB [Escherichia coli KTE227]
gi|433008648|ref|ZP_20197063.1| chaperone ClpB [Escherichia coli KTE229]
gi|433154671|ref|ZP_20339608.1| chaperone ClpB [Escherichia coli KTE176]
gi|433164483|ref|ZP_20349217.1| chaperone ClpB [Escherichia coli KTE179]
gi|433169557|ref|ZP_20354181.1| chaperone ClpB [Escherichia coli KTE180]
gi|218366282|emb|CAR04034.1| protein disaggregation chaperone [Escherichia coli S88]
gi|294493689|gb|ADE92445.1| ATP-dependent chaperone protein ClpB [Escherichia coli IHE3034]
gi|307625856|gb|ADN70160.1| protein disaggregation chaperone [Escherichia coli UM146]
gi|323951207|gb|EGB47083.1| ATP-dependent chaperone ClpB [Escherichia coli H252]
gi|323957039|gb|EGB52765.1| ATP-dependent chaperone ClpB [Escherichia coli H263]
gi|355350857|gb|EHG00053.1| protein disaggregation chaperone [Escherichia coli cloneA_i1]
gi|371605986|gb|EHN94588.1| chaperone ClpB [Escherichia coli H397]
gi|388417427|gb|EIL77270.1| protein disaggregation chaperone [Escherichia coli HM605]
gi|430875662|gb|ELB99184.1| chaperone ClpB [Escherichia coli KTE4]
gi|430885121|gb|ELC08048.1| chaperone ClpB [Escherichia coli KTE5]
gi|431105099|gb|ELE09445.1| chaperone ClpB [Escherichia coli KTE55]
gi|431119264|gb|ELE22272.1| chaperone ClpB [Escherichia coli KTE58]
gi|431129647|gb|ELE31760.1| chaperone ClpB [Escherichia coli KTE62]
gi|431301516|gb|ELF90722.1| chaperone ClpB [Escherichia coli KTE22]
gi|431325766|gb|ELG13144.1| chaperone ClpB [Escherichia coli KTE59]
gi|431336292|gb|ELG23411.1| chaperone ClpB [Escherichia coli KTE65]
gi|431367010|gb|ELG53496.1| chaperone ClpB [Escherichia coli KTE118]
gi|431379087|gb|ELG64023.1| chaperone ClpB [Escherichia coli KTE123]
gi|431513111|gb|ELH91196.1| chaperone ClpB [Escherichia coli KTE227]
gi|431522833|gb|ELH99978.1| chaperone ClpB [Escherichia coli KTE229]
gi|431672931|gb|ELJ39163.1| chaperone ClpB [Escherichia coli KTE176]
gi|431685703|gb|ELJ51270.1| chaperone ClpB [Escherichia coli KTE179]
gi|431686554|gb|ELJ52115.1| chaperone ClpB [Escherichia coli KTE180]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
LK +S G+D +YGAR
Sbjct: 799 VLKLLSENGYDPVYGAR 815
>gi|423121670|ref|ZP_17109354.1| chaperone ClpB [Klebsiella oxytoca 10-5246]
gi|376393762|gb|EHT06417.1| chaperone ClpB [Klebsiella oxytoca 10-5246]
Length = 857
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/709 (57%), Positives = 555/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKEADEASLKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMMEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
++ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S
Sbjct: 739 DLILGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHMSDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|153871333|ref|ZP_02000531.1| ClpB protein [Beggiatoa sp. PS]
gi|152072199|gb|EDN69467.1| ClpB protein [Beggiatoa sp. PS]
Length = 826
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/693 (59%), Positives = 547/693 (78%), Gaps = 9/693 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+KYTIDLTE+A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGE G GKTAIVEGLA
Sbjct: 130 LEKYTIDLTERALKGKLDPVIGRDDEIRRVVQVLQRRTKNNPVLIGEAGTGKTAIVEGLA 189
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIINGEVP SL +K +L LD+ L+AG K+RGEFE+RLK +L +++ + II+FIDEL
Sbjct: 190 QRIINGEVPESLKNKHLLSLDMGALIAGAKFRGEFEERLKAVLSDLAKQEGQIILFIDEL 249
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR+Y+EKDAA ERRFQK+LV E
Sbjct: 250 HTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYVEKDAALERRFQKVLVNE 309
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P++E+TI+ILRGL+++YEVHHGV+ITDPAIVAA+ LS+RYI+DR +PDKAIDL+DEA ++
Sbjct: 310 PNVEDTIAILRGLKERYEVHHGVDITDPAIVAAATLSHRYITDRQLPDKAIDLVDEAGSR 369
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDSKPE +DKL+RRLIQLKIE EA+K+E D +SK RL + EI +LE + A+L +
Sbjct: 370 IRMEIDSKPERIDKLDRRLIQLKIEREAMKKEKDRASKLRLEKLHDEIEQLEKELADLME 429
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IW+ EK ++D ++KEE+E+ L + A R +D + +++L+Y ++ L++ L SQ +
Sbjct: 430 IWRTEKASVQDVSKVKEELEQAHLALETAGRANDLEQMAQLQYEKIPSLKKQLVIASQVE 489
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
LL+ V EEIA++VS+ TGIPVSK+++ ER+KLL +E + +RVVGQD
Sbjct: 490 -----QKGNMQLLRNAVTEEEIADVVSKWTGIPVSKMLEGERDKLLRMEEAVHQRVVGQD 544
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ V+NAIRRSR+GL+D +P GSF+FLGPTGVGKTELCK L+ +F+ +E+++R+DM
Sbjct: 545 EAVHTVANAIRRSRAGLADPNKPNGSFLFLGPTGVGKTELCKALANFLFDTDEAMVRLDM 604
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RLIGAPPGYIGY+EGGYLTE VRRKPYS+ILLDE+EKA+ DVF +LLQ+L
Sbjct: 605 SEFMEKHSVARLIGAPPGYIGYDEGGYLTEAVRRKPYSVILLDEVEKAHPDVFGVLLQVL 664
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++FRNT+IVMTSNLGS I+EM + E +K AVM V +FRPEFI
Sbjct: 665 DDGRLTDGQGRTVDFRNTVIVMTSNLGSQFIQEMAGEENYETMKTAVMEIVGQHFRPEFI 724
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+DDI+VF L R +I +IA++Q++ L+ +L +M+L + AL+ + GFD +YGA
Sbjct: 725 NRVDDIVVFHPLGRTHIRAIADLQIDYLRKRLQAQHMNLVVDDIALEHLGEAGFDPVYGA 784
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
R + K+++ LL+ + A GD I
Sbjct: 785 RPL---KRAIQQLLENSLAQEILAGQFMPGDTI 814
>gi|429097512|ref|ZP_19159618.1| ClpB protein [Cronobacter dublinensis 582]
gi|426283852|emb|CCJ85731.1| ClpB protein [Cronobacter dublinensis 582]
Length = 823
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 534/677 (78%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 111 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 291 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQL +A+ +E DE+SKKRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLERRIIQLGDRQQALMKESDEASKKRLDML 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+N E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 411 NDELNDKERQYSTLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 471 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 525 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 585 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +++I SIA IQL L +L + IS
Sbjct: 705 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAVHISDE 764
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 765 ALQLLGENGYDPVYGAR 781
>gi|320539058|ref|ZP_08038732.1| protein disaggregation chaperone [Serratia symbiotica str. Tucson]
gi|320030898|gb|EFW12903.1| protein disaggregation chaperone [Serratia symbiotica str. Tucson]
Length = 859
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVEDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELH M+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGSVILFIDELHIMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 SSELEQKEREYSELEEEWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L +Q + N LL+ +V EIAE+++R TGIPV+++++ ER+K
Sbjct: 505 KLPELEKQLAAATQAE------GNTMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+SAVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++E+I+RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSDEAIVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD ++E + E +K
Sbjct: 679 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLVQEHFGQMSYEQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V +FRPEFINRID+++VF L++ +I I IQL L +L + ++ +++
Sbjct: 739 ESVMEMVSHHFRPEFINRIDEVVVFHPLSQNHIAEIVKIQLARLYKRLEERGYEVTMTEP 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + GFD +YGAR
Sbjct: 799 ALELLGKTGFDPVYGAR 815
>gi|343506630|ref|ZP_08744105.1| hypothetical protein VII00023_03653 [Vibrio ichthyoenteri ATCC
700023]
gi|342802147|gb|EGU37589.1| hypothetical protein VII00023_03653 [Vibrio ichthyoenteri ATCC
700023]
Length = 857
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 265 ELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRKYME 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVIVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALINEHDEASEKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +A L+++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NNELQEKERDFAELDEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPV+K+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDVEIADVLSKQTGIPVAKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQVLHKRVIGQKEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ATFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFNTLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L +++I SIA IQL L ++ + +++S+
Sbjct: 739 HEVMEVVNKHFRPEFLNRVDESVVFHPLGQEHIKSIAAIQLLRLAKRMEERGYHMEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|425278990|ref|ZP_18670226.1| ATP-dependent chaperone protein ClpB [Escherichia coli ARS4.2123]
gi|408200376|gb|EKI25558.1| ATP-dependent chaperone protein ClpB [Escherichia coli ARS4.2123]
Length = 798
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 86 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 145
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP + +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 146 IGEPGVGKTAIVEGLAQRIINGEVPEGVKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 205
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 206 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 265
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 266 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 325
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 326 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLARRIIQLKLEQQALMKESDEASKKRLDML 385
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 386 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 445
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 446 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 499
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 500 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 559
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 560 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 619
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 620 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 679
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 680 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 739
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 740 ALKLLSENGYDPVYGAR 756
>gi|421856930|ref|ZP_16289288.1| chaperone protein ClpB [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187677|dbj|GAB75489.1| chaperone protein ClpB [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 859
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/673 (59%), Positives = 542/673 (80%), Gaps = 6/673 (0%)
Query: 15 ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEP 74
++S EE L KYTI+LTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEP
Sbjct: 146 VMSNNHEEQRDSLNKYTINLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEP 205
Query: 75 GVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISN 134
GVGKTAIVEGLAQRI+NGEVP SL K++L LD+ LLAG KYRGEFE+RLK +L +++
Sbjct: 206 GVGKTAIVEGLAQRIVNGEVPESLKDKQVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAK 265
Query: 135 NQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAA 194
+ +I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA
Sbjct: 266 QEGRVILFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAA 325
Query: 195 FERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPD 254
ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PD
Sbjct: 326 LERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPD 385
Query: 255 KAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEI 314
KAIDLIDEAA++IK+E+DSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I
Sbjct: 386 KAIDLIDEAASRIKMELDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKSEVNYLEKQI 445
Query: 315 NKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNK 374
+++ +Y +LE++WK EKTL++ +++ + E+++ R+ + KA R+ DW S+L+YG + +
Sbjct: 446 EEVQKEYNDLEEVWKAEKTLVEGTKKAQVELDQARVALEKAQREGDWAEASRLQYGVIPE 505
Query: 375 LERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNI 434
L++ L++ ++ + + LL+ KV EIAE+VS TGIPV+K++Q EREKLL++
Sbjct: 506 LQKQLEQD-----EVIEDHEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLHM 560
Query: 435 ENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACI 494
E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +
Sbjct: 561 EEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFL 620
Query: 495 FNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKA 554
F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA
Sbjct: 621 FDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKA 680
Query: 555 NSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVM 613
+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G E ++ VM
Sbjct: 681 HPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGASDEEMRSVVM 740
Query: 614 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 673
N V +FRPEFINRID++++F L + I IA+IQL L+++L + +M L I A
Sbjct: 741 NAVSHHFRPEFINRIDELVIFHSLKKSQIRGIADIQLERLRSRLAERDMSLTIDDTAFDL 800
Query: 674 ISNIGFDLIYGAR 686
+ + GFD +YGAR
Sbjct: 801 LIDAGFDPVYGAR 813
>gi|400287671|ref|ZP_10789703.1| chaperonin clpA/B [Psychrobacter sp. PAMC 21119]
Length = 865
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/679 (59%), Positives = 542/679 (79%), Gaps = 6/679 (0%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
VN +N Q+D L KYTI+LTE+A LGKLDPVIGRD+EIRR IQVL RR+KNNP
Sbjct: 145 TVNNQNAEDQRD-----ALNKYTINLTEQAELGKLDPVIGRDEEIRRTIQVLSRRTKNNP 199
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQ+IING+VP L K++L LD+ L+AG K+RGEFE+RLK +
Sbjct: 200 VLIGEPGVGKTAIVEGLAQKIINGDVPEGLRRKEVLSLDLGALIAGAKFRGEFEERLKSV 259
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L +++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y
Sbjct: 260 LSDLAKQEGNVILFIDELHTMVGAGKSEGAMDAGNMLKPALARGELHCVGATTLDEYRKY 319
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+
Sbjct: 320 IEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYIT 379
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DR +PDKAIDLIDEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D ++
Sbjct: 380 DRKLPDKAIDLIDEAASRLRMEMDSKPESLGKLDSRLIQLKMQREVLKNEEDAGAQAERK 439
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
+ +I +LE +YA+L +IW+ EK L+K SQQ+K+E++K R+ +KA+R+ D++T+SKL+
Sbjct: 440 ALNAQIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMSKLQ 499
Query: 369 YGELNKLERILKEKS-QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
Y + +LER + E + + + LL+ KV EIAE+V+ TGIPV+K++Q E
Sbjct: 500 YETIPQLERRITESDLAEQKEQTGEGSGVKLLRNKVTDNEIAEVVAAATGIPVNKMMQGE 559
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
REK+L +E L +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL
Sbjct: 560 REKMLAMEEKLHERVIGQDEAVEAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELT 619
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K+L+ +F++E+SI+RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL
Sbjct: 620 KSLANFLFDSEDSIVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGALTEAVRRKPYSVIL 679
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM E
Sbjct: 680 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMVGESYED 739
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK VM+ V +FRPEF+NRID+I+VF L + IA IQL+ L+ +L + MD+++S
Sbjct: 740 IKAEVMDSVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIATIQLDRLRQRLHEREMDIELS 799
Query: 668 KAALKKISNIGFDLIYGAR 686
A+ K+ +G+D +YGAR
Sbjct: 800 ADAMNKLVAVGYDPVYGAR 818
>gi|323491099|ref|ZP_08096289.1| hypothetical protein VIBR0546_19649 [Vibrio brasiliensis LMG 20546]
gi|323314646|gb|EGA67720.1| hypothetical protein VIBR0546_19649 [Vibrio brasiliensis LMG 20546]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/677 (59%), Positives = 539/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVIVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALINEHDDASEKRLTIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ E ++A LE++W EK + +Q IK +E+ R+ + A R D +S+L+YG
Sbjct: 445 NDELADKEREFAELEEVWNAEKAALSGTQHIKSALEQARMDMEFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPVSK+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L K V+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEDVLHKCVIGQTEAVEVVSNAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AKFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFGTVDYQGMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEF+NR+D+ +VF L + +I SIA+IQL L ++ + L +S
Sbjct: 739 DQVMDVVSKHFRPEFLNRVDESVVFHPLGKDHIKSIASIQLERLSKRMEEKGYSLDVSDK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|329297088|ref|ZP_08254424.1| protein disaggregation chaperone [Plautia stali symbiont]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGAEDQRQALKKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPEPLDRLERRIIQLKLEQQALKKESDDASVKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ + E +YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG
Sbjct: 445 ESELAQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLAMEQARRVGDLGQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEKQLASATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHARVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGYIGYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYIGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYAEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V +FRPEFINRID+++VF L K+I SIA IQL L +L + L I A
Sbjct: 739 DVVITVVGHHFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYQRLEERGYQLHICDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK + G+D +YGAR
Sbjct: 799 ALKLLGENGYDPVYGAR 815
>gi|354724735|ref|ZP_09038950.1| protein disaggregation chaperone [Enterobacter mori LMG 25706]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/709 (58%), Positives = 555/709 (78%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+ H V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELRHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ Q +I + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHNRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ IS
Sbjct: 739 DLVLGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|146312713|ref|YP_001177787.1| protein disaggregation chaperone [Enterobacter sp. 638]
gi|145319589|gb|ABP61736.1| ATPase AAA-2 domain protein [Enterobacter sp. 638]
Length = 857
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDSVNDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLERRIIQLKLEQQALKKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ Q + + + LL+ KV EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEK------QLEFAMQSEGKTMRLLRNKVTDVEIADVLARWTGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEHDLHHRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L K+I SIA IQL L +L ++ IS
Sbjct: 739 DLVMGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYEIHISDD 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|336451274|ref|ZP_08621714.1| ATP-dependent chaperone ClpB [Idiomarina sp. A28L]
gi|336281891|gb|EGN75154.1| ATP-dependent chaperone ClpB [Idiomarina sp. A28L]
Length = 857
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 540/677 (79%), Gaps = 9/677 (1%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
G+++ EE L+KYTIDLTE+A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLI
Sbjct: 146 GQSVDDANAEEQREALQKYTIDLTERAEQGKLDPVIGRDEEIRRTLQVLQRRTKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG KYRG+FE+RLK +L E
Sbjct: 206 GEPGVGKTAIVEGLAQRIVNGEVPEGLKRKRVLSLDLGSLLAGAKYRGDFEERLKAVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
+ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEK
Sbjct: 266 LHQEEGQVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+LVEEP +E+TI+ILRGL++KYE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 326 DAALERRFQKVLVEEPSVEDTIAILRGLKEKYELHHSVEITDPAIVAAATLSHRYISDRQ 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLKIE +A+ +E D++SKKRL +
Sbjct: 386 LPDKAIDLIDEAASSIRMQMDSKPEELDRLERRIIQLKIEQQALAKEKDDASKKRLETLS 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
E+++LE YA LE +W EK ++ Q IKE +++ R + A R D +++L+YG+
Sbjct: 446 NELSELEGAYAELETVWNSEKMAVQGHQHIKELLDQARNDLEIANRARDLNRMAELQYGK 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ +LE L+ ++Q + TLL+ +V EEIAE++SR TGIPVS++++ EREKL
Sbjct: 506 IPELEHQLEAALSAEMQ------EMTLLRNRVTDEEIAEVLSRWTGIPVSRMLEGEREKL 559
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L +E+ L +RVVGQ EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+
Sbjct: 560 LQMEDNLHQRVVGQHEAVVAVANSIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELCKALA 619
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE+
Sbjct: 620 RFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEV 679
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLA 611
EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS I+E G+ + ++
Sbjct: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQE-HAGEVQYEEMK 738
Query: 612 VM--NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
M + ++ F+PEF+NRID+ +VF L ++ IA IQL L N+L + L +S+A
Sbjct: 739 AMLGDVLRTAFKPEFLNRIDETVVFHPLADSDLNRIAKIQLQRLFNRLEGRDYKLDVSEA 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+ +++ +GFD ++GAR
Sbjct: 799 AITQLAKVGFDPLFGAR 815
>gi|183597507|ref|ZP_02959000.1| hypothetical protein PROSTU_00781 [Providencia stuartii ATCC 25827]
gi|188023153|gb|EDU61193.1| ATP-dependent chaperone protein ClpB [Providencia stuartii ATCC
25827]
Length = 857
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/718 (58%), Positives = 560/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +Y++LE+ WK EK + +Q IK E+E R ++ KA R D +S+L+YG
Sbjct: 445 EEELAEKEREYSSLEEEWKAEKASLTGTQHIKAELENARYEMEKARRSGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L+ ++ + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 505 RIPELEKQLEAATKAE------GKNMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLRMEQQLHQRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGTIGYSE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V FRPEFINRID+++VF L +++I +IANIQL L +L + ++ +
Sbjct: 738 KDMVMEVVSHSFRPEFINRIDEVVVFHPLGKEHITNIANIQLGRLYKRLEEHGYEVSATP 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AAL+KI GFD I+GAR + K+++ + ++P A I G LI P LD
Sbjct: 798 AALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPVVLD 847
>gi|71065383|ref|YP_264110.1| chaperonin clpA/B [Psychrobacter arcticus 273-4]
gi|71038368|gb|AAZ18676.1| putative chaperonin clpA/B [Psychrobacter arcticus 273-4]
Length = 865
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/681 (59%), Positives = 546/681 (80%), Gaps = 10/681 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
VN +N Q+D L KYTI+LTE+A LGKLDPVIGRD+EIRR IQVL RR+KNNP
Sbjct: 145 TVNNQNAEDQRD-----ALNKYTINLTEQAELGKLDPVIGRDEEIRRTIQVLSRRTKNNP 199
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQ+IING+VP L K++L LD+ L+AG K+RGEFE+RLK +
Sbjct: 200 VLIGEPGVGKTAIVEGLAQKIINGDVPEGLRRKEVLSLDLGALIAGAKFRGEFEERLKAV 259
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L ++S + ++I+FIDELHT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+Y
Sbjct: 260 LSDLSKQEGNVILFIDELHTLVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKY 319
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+
Sbjct: 320 IEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYIT 379
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DR +PDKAIDLIDEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D ++
Sbjct: 380 DRKLPDKAIDLIDEAASRLRMEMDSKPESLGKLDSRLIQLKMQREVLKNEEDAGAQAERK 439
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
++ +I +LE +YA+L +IW+ EK L+K SQQ+K+E++K R+ +KA+R+ D++T+SKL+
Sbjct: 440 VLDAQIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMSKLQ 499
Query: 369 YGELNKLERILKEKS---QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
Y + +LER + E QK+ N+ K LL+ KV EIAE+V+ TGIPVSK++Q
Sbjct: 500 YETIPQLERRIHESDLAEQKEQTGENSGVK--LLRNKVTDNEIAEVVAAATGIPVSKMLQ 557
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
ER+K+L +E L +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTE
Sbjct: 558 GERDKMLAMEENLHERVIGQDEAVEAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 617
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
L K+L+ +F++E++I+RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 618 LTKSLANFLFDSEDAIVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGALTEAVRRKPYSV 677
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 605
IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM
Sbjct: 678 ILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMVGESY 737
Query: 606 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
E IK VM+ V +FRPEF+NRID+I+VF L + IA IQLN L+ +L + +D++
Sbjct: 738 EDIKAEVMDSVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIAAIQLNRLRQRLYERELDIE 797
Query: 666 ISKAALKKISNIGFDLIYGAR 686
+S A+ K+ +G+D +YGAR
Sbjct: 798 LSADAMNKLVAVGYDPVYGAR 818
>gi|429085706|ref|ZP_19148669.1| ClpB protein [Cronobacter condimenti 1330]
gi|426545026|emb|CCJ74710.1| ClpB protein [Cronobacter condimenti 1330]
Length = 861
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/677 (59%), Positives = 536/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NDELTDKERQYSALEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 509 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GA PGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGALPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYASMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L +++I SIA IQL L +L ++IS
Sbjct: 743 ELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAVRISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + G+D +YGAR
Sbjct: 803 ALQLLGENGYDPVYGAR 819
>gi|387888298|ref|YP_006318596.1| ATP-dependent chaperone protein ClpB [Escherichia blattae DSM 4481]
gi|414595937|ref|ZP_11445541.1| chaperone protein ClpB [Escherichia blattae NBRC 105725]
gi|386923131|gb|AFJ46085.1| ATP-dependent chaperone protein ClpB [Escherichia blattae DSM 4481]
gi|403193094|dbj|GAB83193.1| chaperone protein ClpB [Escherichia blattae NBRC 105725]
Length = 858
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/677 (59%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQNAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+++E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALRKEADEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 EEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRNGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEQLHDRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELNYGSMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L +++I SIA IQL L +L + + IS
Sbjct: 739 DLVLEVVSHNFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYKRLEERGYSVHISAE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL +S GFD +YGAR
Sbjct: 799 ALNLLSENGFDPVYGAR 815
>gi|359430144|ref|ZP_09221157.1| chaperone protein ClpB [Acinetobacter sp. NBRC 100985]
gi|358234361|dbj|GAB02696.1| chaperone protein ClpB [Acinetobacter sp. NBRC 100985]
Length = 859
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/681 (60%), Positives = 546/681 (80%), Gaps = 9/681 (1%)
Query: 9 NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNN
Sbjct: 139 NIRGNDKVMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGEPGVGKTAIVEGLAQRIINGEVP SL +K++L LD+ LLAG KYRGEFE+RLK
Sbjct: 199 PVLIGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK +
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDSGSKAEV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I + + +Y +LE+IWK EKTL++ ++ + E+++ R + KA R+ D ++L
Sbjct: 439 NHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARSALEKAKREGDLAEAARL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS TGIPVSK++Q E
Sbjct: 499 QYGVIPELQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVSKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
REKLLN+E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL
Sbjct: 554 REKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DK 605
DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDD 733
Query: 606 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
E ++ VMN V +FRPEFINRID+++VF L + I IA+IQL+ L+++L +M L
Sbjct: 734 E-VRAVVMNAVGQHFRPEFINRIDELVVFHSLQKAQIRGIADIQLDRLRSRLSDRDMGLT 792
Query: 666 ISKAALKKISNIGFDLIYGAR 686
+ A + + GFD +YGAR
Sbjct: 793 VDDTAFDLLIDAGFDPVYGAR 813
>gi|378581052|ref|ZP_09829702.1| protein disaggregation chaperone [Pantoea stewartii subsp.
stewartii DC283]
gi|377816131|gb|EHT99236.1| protein disaggregation chaperone [Pantoea stewartii subsp.
stewartii DC283]
Length = 857
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 539/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +YA LE+ WK EK + +Q IK E+E+ RL++ +A R D +S+L+YG
Sbjct: 445 EAELNQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLQLEQARRSGDLAQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPALEKQLASATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEQELHSRVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLNYAEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NRID+++VF L K+I SIA IQL L +L L IS A
Sbjct: 739 GVVMGVVGQHFRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQLHISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+K + G+D +YGAR
Sbjct: 799 AIKLLGENGYDPVYGAR 815
>gi|262043836|ref|ZP_06016926.1| chaperone ClpB [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|259038806|gb|EEW39987.1| chaperone ClpB [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
Length = 861
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLT 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPVS++++ ER+K
Sbjct: 509 KIPELEKQLAAATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 563 LLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FR EFINRID+++VF L K+I SIA IQL L +L + +++IS
Sbjct: 743 DLVLGVVSQNFRLEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQISDE 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSANGYDPVYGAR 819
>gi|237809508|ref|YP_002893948.1| ATP-dependent chaperone ClpB [Tolumonas auensis DSM 9187]
gi|237501769|gb|ACQ94362.1| ATP-dependent chaperone ClpB [Tolumonas auensis DSM 9187]
Length = 858
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 538/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+KYTIDLTE+A GKLDPVIGRD+EIRR +QVLQRR+KNNPVL
Sbjct: 145 GGEKVTDAGAEEKRQALEKYTIDLTERAEQGKLDPVIGRDEEIRRTVQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGSLLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 ELAKQEGNVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA I+++IDSKPE +D+LERR++QLK+E +A+ +E D +S +RL +I
Sbjct: 385 QLPDKAIDLIDEAAASIRLQIDSKPEQLDRLERRIVQLKMEQQALMKESDVASAQRLGII 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
KEI + + +Y LE+IWK EK + +Q IK E+E+ R +++ A R D +S+L YG
Sbjct: 445 NKEITEKDREYNELEEIWKAEKAALAGTQHIKSELEQARQELDVARRAGDLAKMSELHYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++Q + TLL+ +V EEIAE++SR TGIPV+++++ ER+K
Sbjct: 505 RIPELEKQLDLASQAEMQ------EQTLLRNRVTDEEIAEVLSRWTGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA++AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEKLHQRVIGQDEAVNAVANAIRRSRAGLSDPMRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN +I+MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNAVIIMTSNLGSDLIQEHHHLMEYQEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M + FRPEF+NRID+ +VF L ++I SIA IQL L +L + +++ +
Sbjct: 739 SMLMEVLTRSFRPEFLNRIDETVVFHPLGAEHIQSIAKIQLQSLVKRLEDIGYKVELRDS 798
Query: 670 ALKKISNIGFDLIYGAR 686
L ++ GFD +YGAR
Sbjct: 799 LLSYLAQSGFDPVYGAR 815
>gi|423109769|ref|ZP_17097464.1| chaperone ClpB [Klebsiella oxytoca 10-5243]
gi|376381138|gb|EHS93877.1| chaperone ClpB [Klebsiella oxytoca 10-5243]
Length = 857
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/709 (57%), Positives = 553/709 (77%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDDASIKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S
Sbjct: 739 EMVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHMSDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|365847002|ref|ZP_09387499.1| ATP-dependent chaperone protein ClpB [Yokenella regensburgei ATCC
43003]
gi|364573153|gb|EHM50666.1| ATP-dependent chaperone protein ClpB [Yokenella regensburgei ATCC
43003]
Length = 861
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/677 (59%), Positives = 543/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLSLDMGALVAGAKYRGEFEERLKGVLN 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 269 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQFIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 329 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+KRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASRKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 449 NEELDDKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 509 KIPELEKQLASATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMESERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 563 LLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 683 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA+IQL L +L + ++ IS
Sbjct: 743 DLVLGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIASIQLQRLYKRLEERGYEVHISDD 802
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 803 ALKLLSENGYDPVYGAR 819
>gi|254362598|ref|ZP_04978693.1| endopeptidase ClpA [Mannheimia haemolytica PHL213]
gi|452744796|ref|ZP_21944637.1| ATP-dependent Clp protease subunit B [Mannheimia haemolytica
serotype 6 str. H23]
gi|153094206|gb|EDN75089.1| endopeptidase ClpA [Mannheimia haemolytica PHL213]
gi|452087214|gb|EME03596.1| ATP-dependent Clp protease subunit B [Mannheimia haemolytica
serotype 6 str. H23]
Length = 855
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/678 (59%), Positives = 550/678 (81%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + +Q E+ LKKYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGDTVNNQNAEDTRQALKKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 DLAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+IWK EK+ + +Q IK E+E R+ +++A R++D++ +S+L+YG
Sbjct: 443 DEEMAAKEREYSELEEIWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMSELQYG 502
Query: 371 ELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
+ LE+ L+ E +K NA+ LL+TKV EEIAE++S+ TGIPV+K+++ E+
Sbjct: 503 VIPNLEKQLQAVENGEK------NADA-QLLRTKVTEEEIAEVLSKATGIPVAKMMEGEK 555
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
EKLL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTEL K
Sbjct: 556 EKLLRMEEVLHARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSK 615
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
TL+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR PYS++LL
Sbjct: 616 TLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLL 675
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEII 608
DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E +++
Sbjct: 676 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYKGYDVV 735
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+ ++F L +++I SIA IQL L +L + ++ ++
Sbjct: 736 KEMVMEVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTD 795
Query: 669 AALKKISNIGFDLIYGAR 686
AAL I GFD ++GAR
Sbjct: 796 AALDHIGKAGFDPLFGAR 813
>gi|448240622|ref|YP_007404675.1| protein disaggregation chaperone [Serratia marcescens WW4]
gi|445210986|gb|AGE16656.1| protein disaggregation chaperone [Serratia marcescens WW4]
gi|453064614|gb|EMF05578.1| protein disaggregation chaperone [Serratia marcescens VGH107]
Length = 857
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/677 (59%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDSVEDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 SDELGQKEREYSELEEEWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIAE+++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEKQLAAATQAE------GKSMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+SAVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V +FRPEFINRID+++VF L K+I +IA IQL+ L +L + ++ +++
Sbjct: 739 ESVMEMVSHHFRPEFINRIDEVVVFHPLGEKHIAAIAKIQLSRLYKRLEERGYEVTMTEP 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL +S G+D +YGAR
Sbjct: 799 ALALLSKTGYDPVYGAR 815
>gi|410611339|ref|ZP_11322438.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
gi|410169190|dbj|GAC36327.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
Length = 864
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/678 (60%), Positives = 537/678 (79%), Gaps = 7/678 (1%)
Query: 10 VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPV 69
G+ + EE L KY+ID+TE+A GKLDPVIGRDDEIRR IQVLQRRSKNNPV
Sbjct: 144 TGGQPVNDANAEEQRDALDKYSIDVTERAEQGKLDPVIGRDDEIRRVIQVLQRRSKNNPV 203
Query: 70 LIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKIL 129
LIGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+A L+AG K+RGEFE+RLK +L
Sbjct: 204 LIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRLLSLDMAALIAGAKFRGEFEERLKAVL 263
Query: 130 KEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
+++ + ++I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YI
Sbjct: 264 NDVARQEGNVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRKYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKD A ERRFQK+LVEEP IE+TI+ILRGL++KYEVHHGV ITD AIVAA+ LS RYI+D
Sbjct: 324 EKDTALERRFQKVLVEEPSIEDTIAILRGLKEKYEVHHGVAITDSAIVAATLLSQRYIAD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEA ++I++EIDS PE MDKL+RRLIQLKIE EA+K+E D++SKKRL
Sbjct: 384 RQLPDKAIDLIDEAGSRIRMEIDSMPEEMDKLDRRLIQLKIEREALKKETDDASKKRLNN 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+ +E+N LE+++++L++ W EK ++ Q+KEE+E+ R ++ A R SD +S+++Y
Sbjct: 444 LDEEVNVLELEFSDLKETWISEKAYVQGETQVKEELEQARRELEAARRASDLTRMSEIQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G + +LE L SQ N + TLL+ KV EEIAE+VS+ TGIPVSK++ ERE
Sbjct: 504 GRIPELEAKLIVVSQ------NQTKEMTLLRNKVTDEEIAEVVSKWTGIPVSKMLSGERE 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL +E L RV+GQ+EAI+AVS++IR SR+GL+D +RP GSF+FLGPTGVGKTEL K
Sbjct: 558 KLLKMEEALHSRVIGQEEAITAVSDSIRSSRAGLADPQRPNGSFLFLGPTGVGKTELTKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +F+ E+SI+RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PY+++LLD
Sbjct: 618 LAEFLFDTEDSIVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYAVVLLD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-EII 608
E+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS I ++ + E I
Sbjct: 678 EVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHLILDVAGEENYEEI 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K V+ V +FRPEFINR+D+I+VF L + + IA IQLN L +L + ++ L IS
Sbjct: 738 KKRVLEVVGQHFRPEFINRLDEIVVFHPLKKDQVRQIAKIQLNYLHKRLAEQDLSLDISD 797
Query: 669 AALKKISNIGFDLIYGAR 686
+ I++ GFD +YGAR
Sbjct: 798 NVVDVIADAGFDPVYGAR 815
>gi|333925693|ref|YP_004499272.1| ATP-dependent chaperone ClpB [Serratia sp. AS12]
gi|333930646|ref|YP_004504224.1| ATP-dependent chaperone ClpB [Serratia plymuthica AS9]
gi|386327517|ref|YP_006023687.1| ATP-dependent chaperone ClpB [Serratia sp. AS13]
gi|421781776|ref|ZP_16218240.1| ATP-dependent chaperone protein ClpB [Serratia plymuthica A30]
gi|333472253|gb|AEF43963.1| ATP-dependent chaperone ClpB [Serratia plymuthica AS9]
gi|333489753|gb|AEF48915.1| ATP-dependent chaperone ClpB [Serratia sp. AS12]
gi|333959850|gb|AEG26623.1| ATP-dependent chaperone ClpB [Serratia sp. AS13]
gi|407756109|gb|EKF66228.1| ATP-dependent chaperone protein ClpB [Serratia plymuthica A30]
Length = 857
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/677 (59%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDSVEDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 SSELEQKEREYSELEEEWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIAE+++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEKQLAAATQAE------GKTMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRLEQELHSRVIGQDEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V +FRPEFINRID+++VF L +K+I IA IQL L +L + ++ +++
Sbjct: 739 ESVMEMVTHHFRPEFINRIDEVVVFHPLGQKHIAEIAKIQLARLYKRLEERGYEVTMTEP 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL + G+D +YGAR
Sbjct: 799 ALALLGQTGYDPVYGAR 815
>gi|386016866|ref|YP_005935161.1| chaperone ClpB [Pantoea ananatis AJ13355]
gi|327394943|dbj|BAK12365.1| chaperone ClpB [Pantoea ananatis AJ13355]
Length = 861
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/677 (60%), Positives = 538/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLS 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG
Sbjct: 449 EAELNQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLTLEQARRSGDLAQMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 509 KIPALEKQLASATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 563 LLRMEQELHSRVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTELCKSL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + +K
Sbjct: 683 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLNYPEMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NRID+++VF L K+I SIA IQL L +L L IS A
Sbjct: 743 NLVMGVVGQHFRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQLHISDA 802
Query: 670 ALKKISNIGFDLIYGAR 686
A+K + G+D +YGAR
Sbjct: 803 AIKLLGENGYDPVYGAR 819
>gi|291618563|ref|YP_003521305.1| ClpB [Pantoea ananatis LMG 20103]
gi|291153593|gb|ADD78177.1| ClpB [Pantoea ananatis LMG 20103]
Length = 861
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/677 (60%), Positives = 538/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 149 GGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLS 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 269 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 329 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 389 QLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVKRLDML 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG
Sbjct: 449 EAELNQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLTLEQARRSGDLAQMSELQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 509 KIPALEKQLASATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 562
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 563 LLRMEQELHSRVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTELCKSL 622
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 623 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 682
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + +K
Sbjct: 683 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLNYPEMK 742
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NRID+++VF L K+I SIA IQL L +L L IS A
Sbjct: 743 NLVMGVVGQHFRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQLHISDA 802
Query: 670 ALKKISNIGFDLIYGAR 686
A+K + G+D +YGAR
Sbjct: 803 AIKLLGENGYDPVYGAR 819
>gi|262369634|ref|ZP_06062962.1| ATP-dependent protease Hsp 100 [Acinetobacter johnsonii SH046]
gi|262315702|gb|EEY96741.1| ATP-dependent protease Hsp 100 [Acinetobacter johnsonii SH046]
Length = 859
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/695 (58%), Positives = 554/695 (79%), Gaps = 16/695 (2%)
Query: 1 MGIKNNSLN-----VNG-KNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G++ +SL + G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVQADSLRQVILKIRGDEKVMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRIIN EVP SL K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINREVPESLQGKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK++S ++I+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLSKQDGEVILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQ+IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D
Sbjct: 306 RCVGATTLDEYRQFIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKLERRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLERRLIQLKLQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D S+ + ++K+I++++ +Y +LE++WK EKTL++ ++Q++ E+++ R+ + K
Sbjct: 426 VKKDEDAGSRAEVAHLEKQISEVQREYNDLEEVWKAEKTLVEGTKQVQAELDQARIALQK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R++D +S+L+YG + +LE+ L E+ + LL+ KV EIAE+VS
Sbjct: 486 AQRENDLGEMSRLQYGVIPELEKRLNEEEVV-----EEKEEPKLLRNKVTDNEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLL++E L RVVGQD+A+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMMQGEREKLLHMEEFLHNRVVGQDDAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKGDK---EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLN 651
++E+ GD E ++ VMN V +FRPEFINRID+++VF L + I IA+IQL+
Sbjct: 721 SDVREL--GDNPLDEEVRAVVMNAVTQHFRPEFINRIDELVVFHSLKKAQIRGIADIQLD 778
Query: 652 ILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L++ +M L + A + + GFD +YGAR
Sbjct: 779 RLRDRLVEKDMRLTVDDQAFDLLIDAGFDPVYGAR 813
>gi|402840625|ref|ZP_10889087.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. OBRC7]
gi|423104334|ref|ZP_17092036.1| chaperone ClpB [Klebsiella oxytoca 10-5242]
gi|376382906|gb|EHS95635.1| chaperone ClpB [Klebsiella oxytoca 10-5242]
gi|402285341|gb|EJU33827.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. OBRC7]
Length = 857
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/709 (57%), Positives = 553/709 (77%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYSHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S
Sbjct: 739 DLVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHLSDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|93005671|ref|YP_580108.1| ATPase AAA-2 [Psychrobacter cryohalolentis K5]
gi|92393349|gb|ABE74624.1| ATPase AAA-2 [Psychrobacter cryohalolentis K5]
Length = 865
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/681 (59%), Positives = 545/681 (80%), Gaps = 10/681 (1%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
VN +N Q+D L KYTI+LTE+A LGKLDPVIGRD+EIRR IQVL RR+KNNP
Sbjct: 145 TVNNQNAEDQRD-----ALNKYTINLTEQAELGKLDPVIGRDEEIRRTIQVLSRRTKNNP 199
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQ+IING+VP L K++L LD+ L+AG K+RGEFE+RLK +
Sbjct: 200 VLIGEPGVGKTAIVEGLAQKIINGDVPEGLRRKEVLSLDLGALIAGAKFRGEFEERLKAV 259
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
L ++S + ++I+FIDELHT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+Y
Sbjct: 260 LSDLSKQEGNVILFIDELHTLVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKY 319
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+
Sbjct: 320 IEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYIT 379
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DR +PDKAIDLIDEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D ++
Sbjct: 380 DRKLPDKAIDLIDEAASRLRMEMDSKPESLGKLDSRLIQLKMQREVLKNEEDAGAQAERK 439
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
++ +I +LE +YA+L +IW+ EK L+K SQQ+K+E++K R+ +KA+R+ D++ +SKL+
Sbjct: 440 VLDAQIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYEIMSKLQ 499
Query: 369 YGELNKLERILKEK---SQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 425
Y + +LER + E QK+ N+ K LL+ KV EIAE+V+ TGIPVSK++Q
Sbjct: 500 YETIPQLERRIHESDLAEQKEQTGENSGVK--LLRNKVTDNEIAEVVAAATGIPVSKMMQ 557
Query: 426 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 485
ER+K+L +E L +RV+GQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTE
Sbjct: 558 GERDKMLAMEEKLHERVIGQDEAVEAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 617
Query: 486 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 545
L K+L+ +F++E++I+RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 618 LTKSLANFLFDSEDAIVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGALTEAVRRKPYSV 677
Query: 546 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 605
IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM
Sbjct: 678 ILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMVGESY 737
Query: 606 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
E IK VM+ V +FRPEF+NRID+I+VF L + IA IQLN L+ +L + +D++
Sbjct: 738 EDIKAEVMDSVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIAAIQLNRLRQRLYERELDIE 797
Query: 666 ISKAALKKISNIGFDLIYGAR 686
+S A+ K+ +G+D +YGAR
Sbjct: 798 LSAEAMNKLVAVGYDPVYGAR 818
>gi|393764456|ref|ZP_10353066.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Alishewanella agri BL06]
gi|392604585|gb|EIW87486.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Alishewanella agri BL06]
Length = 859
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/708 (57%), Positives = 558/708 (78%), Gaps = 15/708 (2%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
G+ + E+ L KYTIDLT +A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLI
Sbjct: 146 GQKVEDANAEDTRQALTKYTIDLTARAESGKLDPVIGRDEEIRRCVQVLQRRTKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRI+N EVP L K++L LD+ LLAG KYRGEFE+RLK +L E
Sbjct: 206 GEPGVGKTAIVEGLAQRIVNKEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERLKAVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
++ + II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEK
Sbjct: 266 VAKEEGQIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 326 DAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAATLSHRYVSDRQ 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E A+ +E D++SKKR I+
Sbjct: 386 LPDKAIDLIDEAASSIRMQMDSKPEELDRLERRIIQLKLEDNALAKETDDASKKRRDTIR 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
++I++LE +Y L+++W+ EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG
Sbjct: 446 EQIDELEQRYNELDEVWESEKAALQGTQNIKAELEQARLDLEVARRASDLQRMSELQYGR 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ +LE+ L SQ ++Q + TLL+ KV +EIA+++S+ TGIPV+K+++ ER+KL
Sbjct: 506 IPELEKKLDLASQAEMQ------EMTLLRHKVTDQEIADVLSKATGIPVNKMLEGERDKL 559
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L +E+ L +VVGQ EA+SAV+NAIRRSR+GL+D +P GSF+FLGPTGVGKTEL K L+
Sbjct: 560 LRMEDALHAKVVGQQEAVSAVANAIRRSRAGLADPNKPIGSFLFLGPTGVGKTELTKALA 619
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F++ ++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+
Sbjct: 620 QFLFDSPDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEV 679
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKL 610
EKA+ DVFNILLQ+LDDGRLTD +GRT++F+N +I+MTSNLGSD I+E + +K
Sbjct: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQEHYREFSYTEMKE 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
+M + FRPEF+NR+D+ +VF L+ + I IA+IQL L+ +L + + L +S AA
Sbjct: 740 MLMGVLSKQFRPEFLNRLDEAVVFHPLDDRQIKQIASIQLARLEQRLQQRDYQLSVSDAA 799
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
L+K++ +GFD +YGAR + K+++ + H ++P A + G+++
Sbjct: 800 LEKLAEVGFDPLYGARPL---KRAI-----QQHLENPLAQALLQGEIL 839
>gi|375256817|ref|YP_005015987.1| protein disaggregation chaperone [Klebsiella oxytoca KCTC 1686]
gi|365906295|gb|AEX01748.1| protein disaggregation chaperone [Klebsiella oxytoca KCTC 1686]
Length = 857
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/709 (57%), Positives = 553/709 (77%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYSHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S
Sbjct: 739 ELVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHLSDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|378765994|ref|YP_005194455.1| ATP-dependent chaperone ClpB [Pantoea ananatis LMG 5342]
gi|386078251|ref|YP_005991776.1| Chaperone protein clpB [Pantoea ananatis PA13]
gi|354987432|gb|AER31556.1| Chaperone protein clpB [Pantoea ananatis PA13]
gi|365185468|emb|CCF08418.1| ATP-dependent chaperone ClpB [Pantoea ananatis LMG 5342]
Length = 857
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/677 (60%), Positives = 538/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG
Sbjct: 445 EAELNQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLTLEQARRSGDLAQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPALEKQLASATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK+L
Sbjct: 559 LLRMEQELHSRVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTELCKSL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLNYPEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NRID+++VF L K+I SIA IQL L +L L IS A
Sbjct: 739 NLVMGVVGQHFRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQLHISDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
A+K + G+D +YGAR
Sbjct: 799 AIKLLGENGYDPVYGAR 815
>gi|381196637|ref|ZP_09903979.1| ATP-dependent chaperone ClpB [Acinetobacter lwoffii WJ10621]
Length = 859
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/695 (58%), Positives = 554/695 (79%), Gaps = 16/695 (2%)
Query: 1 MGIKNNSLN-----VNG-KNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G++ +SL + G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVQADSLRKVILKIRGDEKVMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRIIN EVP SL K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINREVPESLQGKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK++S ++I+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLSKQDGEVILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQ+IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D
Sbjct: 306 RCVGATTLDEYRQFIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKLERRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLERRLIQLKLQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D S+ + ++K+I++++ +Y +LE++WK EKTL++ ++Q++ E+++ R+ + K
Sbjct: 426 VKKDEDAGSRAEVAHLEKQISEVQHEYNDLEEVWKAEKTLVEGTKQVQAELDQARIALQK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R++D +S+L+YG + +LE+ L E+ + LL+ KV EIAE+VS
Sbjct: 486 AQRENDLGEMSRLQYGVIPELEKRLNEEEVV-----EEKEEPKLLRNKVTDNEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLL++E L RVVGQD+A+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMMQGEREKLLHMEEFLHNRVVGQDDAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKGDK---EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLN 651
++E+ GD E ++ VMN V +FRPEFINRID+++VF L + I IA+IQL+
Sbjct: 721 SDVREL--GDNPLDEEVRAVVMNAVAQHFRPEFINRIDELVVFHSLKKAQIRGIADIQLD 778
Query: 652 ILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+++L++ +M L + A + + GFD +YGAR
Sbjct: 779 RLRDRLVEKDMRLTVDDQAFDLLIDAGFDPVYGAR 813
>gi|397659422|ref|YP_006500124.1| clpB protein [Klebsiella oxytoca E718]
gi|394347603|gb|AFN33724.1| ClpB protein [Klebsiella oxytoca E718]
Length = 823
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/709 (57%), Positives = 553/709 (77%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 111 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 170
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 171 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 230
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 231 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 290
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 291 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 350
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 351 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIKRLDML 410
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 411 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 470
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 471 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 524
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 525 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 584
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 585 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 644
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 645 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYSHMK 704
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S
Sbjct: 705 ELVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHLSDE 764
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 765 ALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 805
>gi|410666026|ref|YP_006918397.1| ATP-dependent chaperone ClpB [Simiduia agarivorans SA1 = DSM 21679]
gi|409028383|gb|AFV00668.1| ATP-dependent chaperone ClpB [Simiduia agarivorans SA1 = DSM 21679]
Length = 858
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/679 (62%), Positives = 545/679 (80%), Gaps = 9/679 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + S E + L K+TIDLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVDSADAEGNRQALDKFTIDLTARAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRLLSLDLGSLLAGAKFRGEFEERLKNVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKQEGRIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K++ E++KK+L L+
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPEEMDRLERRLIQLKIEREAVKKDETEAAKKQLNLL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
EI K+E +YA+LE+IW+ EK + SQ IK +E+ RL + A R D +S+L+YG
Sbjct: 445 DGEIEKVEREYADLEEIWRTEKAALSGSQDIKSSLEQARLDMEAARRAGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L SQ ++ + LL+ KV EEIAE+VS+ TGIPVSK+++ EREK
Sbjct: 505 VIPELEKQLDMASQAEMM------EMKLLRNKVSDEEIAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L K+V+GQ EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLQMESALHKKVIGQTEAVIAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 AEFLFDTPEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDK--EI 607
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGSD+I+++ E GD +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDRIQQLSEGGDANYDA 738
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK +VM+ V +FRPEFINRID+ +VF L R+ I IA +QL +L+ +L + + L +
Sbjct: 739 IKASVMDVVGQHFRPEFINRIDESVVFHPLGREQIRGIAELQLALLQRRLKERELSLTLE 798
Query: 668 KAALKKISNIGFDLIYGAR 686
A + K+ G+D +YGAR
Sbjct: 799 DAVMDKVLAAGYDPVYGAR 817
>gi|17864015|gb|AAL47016.1|AF449501_1 ClpB ATP protease [Paracoccidioides brasiliensis]
Length = 792
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/675 (59%), Positives = 544/675 (80%), Gaps = 10/675 (1%)
Query: 15 ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEP 74
++S E+ L KYT+DLTE+A GKLDPVIGRDDEIRR +QVL RR+KNNPVLIGEP
Sbjct: 79 VMSNNHEDQRDSLNKYTVDLTERALAGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEP 138
Query: 75 GVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISN 134
GVGKTAIVEGLAQRI+NGEVP SL K++L LD+ LLAG KYRGEFE+RLK +LK+++
Sbjct: 139 GVGKTAIVEGLAQRIVNGEVPESLKGKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAK 198
Query: 135 NQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAA 194
++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA
Sbjct: 199 HEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAA 258
Query: 195 FERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPD 254
ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PD
Sbjct: 259 LERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPD 318
Query: 255 KAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEI 314
KAIDLIDEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D S+ + ++K+I
Sbjct: 319 KAIDLIDEAASRIKMELDSKPEALDKLERRLIQLKLQLEAVKKDEDAGSRAEVSHLEKQI 378
Query: 315 NKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNK 374
++ Y +LE++WK EKTL++ ++QI+ ++++ R+ + KA R++D +S+L+YG + +
Sbjct: 379 EDVQKDYNDLEEVWKSEKTLVEGTKQIQAQLDQARIALQKAQRENDLGEMSRLQYGVIPE 438
Query: 375 LERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNI 434
LE+ L + +L + LL+ KV EIAE+VS TGIPV+K++Q EREKLL +
Sbjct: 439 LEKQLAQD-----ELVEEKEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLQM 493
Query: 435 ENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACI 494
E+ L +RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +
Sbjct: 494 ESFLHQRVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFL 553
Query: 495 FNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKA 554
F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA
Sbjct: 554 FDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKA 613
Query: 555 NSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD---KEIIKLA 611
+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ GD ++ ++
Sbjct: 614 HPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSSDVREL--GDNPSRDDVRNV 671
Query: 612 VMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAAL 671
VM V +FRPEFINRID+++VF L + I IA+IQL+ L+ +L ++ L + +A
Sbjct: 672 VMAAVSEHFRPEFINRIDELVVFHALEKAQIRGIADIQLDRLRARLADRDIKLTVDDSAF 731
Query: 672 KKISNIGFDLIYGAR 686
++ GFD +YGAR
Sbjct: 732 DQLIEAGFDPVYGAR 746
>gi|421464124|ref|ZP_15912817.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
WC-A-157]
gi|400206498|gb|EJO37475.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
WC-A-157]
Length = 859
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/673 (59%), Positives = 542/673 (80%), Gaps = 6/673 (0%)
Query: 15 ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEP 74
++S EE L KYTI+LTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEP
Sbjct: 146 VMSNNHEEQRDSLNKYTINLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEP 205
Query: 75 GVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISN 134
GVGKTAIVEGLAQRI+NGEVP SL K++L LD+ LLAG KYRGEFE+RLK +L +++
Sbjct: 206 GVGKTAIVEGLAQRIVNGEVPESLKDKQVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAK 265
Query: 135 NQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAA 194
+ +I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA
Sbjct: 266 QEGRVILFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAA 325
Query: 195 FERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPD 254
ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PD
Sbjct: 326 LERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPD 385
Query: 255 KAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEI 314
KAIDLIDEAA++IK+E+DSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I
Sbjct: 386 KAIDLIDEAASRIKMELDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKSEVNYLEKQI 445
Query: 315 NKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNK 374
+++ +Y +LE++WK EKTL++ +++ + E+++ R+ + KA R+ DW S+L+YG + +
Sbjct: 446 EEVQKEYNDLEEVWKAEKTLVEGTKKAQVELDQARVALEKAQREGDWAEASRLQYGVIPE 505
Query: 375 LERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNI 434
L++ L++ ++ + + LL+ KV EIAE+VS TGIPV+K++Q EREKLL++
Sbjct: 506 LQKQLEQD-----EVIEDHEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLHM 560
Query: 435 ENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACI 494
E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +
Sbjct: 561 EEFLHNRVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFL 620
Query: 495 FNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKA 554
F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA
Sbjct: 621 FDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKA 680
Query: 555 NSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVM 613
+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G E ++ VM
Sbjct: 681 HPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGASDEEMRSVVM 740
Query: 614 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 673
+ V +FRPEFINRID++++F L + I IA+IQL L+++L + +M L I A
Sbjct: 741 SAVSHHFRPEFINRIDELVIFHSLKKSQIRGIADIQLERLRSRLAERDMSLTIDDTAFDL 800
Query: 674 ISNIGFDLIYGAR 686
+ + GFD +YGAR
Sbjct: 801 LIDAGFDPVYGAR 813
>gi|255319673|ref|ZP_05360882.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
SK82]
gi|262378533|ref|ZP_06071690.1| ATP-dependent chaperone ClpB [Acinetobacter radioresistens SH164]
gi|255303290|gb|EET82498.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
SK82]
gi|262299818|gb|EEY87730.1| ATP-dependent chaperone ClpB [Acinetobacter radioresistens SH164]
Length = 859
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/673 (59%), Positives = 542/673 (80%), Gaps = 6/673 (0%)
Query: 15 ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEP 74
++S EE L KYTI+LTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEP
Sbjct: 146 VMSNNHEEQRDSLNKYTINLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEP 205
Query: 75 GVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISN 134
GVGKTAIVEGLAQRI+NGEVP SL K++L LD+ LLAG KYRGEFE+RLK +L +++
Sbjct: 206 GVGKTAIVEGLAQRIVNGEVPESLKDKQVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAK 265
Query: 135 NQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAA 194
+ +I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA
Sbjct: 266 QEGRVILFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAA 325
Query: 195 FERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPD 254
ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PD
Sbjct: 326 LERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPD 385
Query: 255 KAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEI 314
KAIDLIDEAA++IK+E+DSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++K+I
Sbjct: 386 KAIDLIDEAASRIKMELDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKSEVNYLEKQI 445
Query: 315 NKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNK 374
+++ +Y +LE++WK EKTL++ +++ + E+++ R+ + KA R+ DW S+L+YG + +
Sbjct: 446 EEVQKEYNDLEEVWKAEKTLVEGTKKAQVELDQARVALEKAQREGDWAEASRLQYGVIPE 505
Query: 375 LERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNI 434
L++ L++ ++ + + LL+ KV EIAE+VS TGIPV+K++Q EREKLL++
Sbjct: 506 LQKQLEQD-----EVIEDHEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLHM 560
Query: 435 ENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACI 494
E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +
Sbjct: 561 EEFLHNRVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFL 620
Query: 495 FNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKA 554
F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+EKA
Sbjct: 621 FDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKA 680
Query: 555 NSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVM 613
+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G E ++ VM
Sbjct: 681 HPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGASDEEMRSVVM 740
Query: 614 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 673
+ V +FRPEFINRID++++F L + I IA+IQL L+++L + +M L I A
Sbjct: 741 SAVSHHFRPEFINRIDELVIFHSLKKSQIRGIADIQLERLRSRLAERDMSLTIDDTAFDL 800
Query: 674 ISNIGFDLIYGAR 686
+ + GFD +YGAR
Sbjct: 801 LIDAGFDPVYGAR 813
>gi|262372812|ref|ZP_06066091.1| ATP-dependent chaperone ClpB [Acinetobacter junii SH205]
gi|262312837|gb|EEY93922.1| ATP-dependent chaperone ClpB [Acinetobacter junii SH205]
Length = 859
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/681 (59%), Positives = 547/681 (80%), Gaps = 9/681 (1%)
Query: 9 NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNN
Sbjct: 139 NIRGNDKVMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGEPGVGKTAIVEGLAQRIINGEVP SL +K++L LD+ LLAG KYRGEFE+RLK
Sbjct: 199 PVLIGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK +
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I + + +Y +LE+IWK EKTL++ ++ + E+++ R+ + KA R+ D ++L
Sbjct: 439 NHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARVALEKAKREGDLAEAARL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS TGIPVSK++Q E
Sbjct: 499 QYGVIPELQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVSKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
REKLLN+E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL
Sbjct: 554 REKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DK 605
DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDD 733
Query: 606 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
E ++ VM+ V +FRPEFINRID++++F L + I IA+IQL+ L+++L +M L
Sbjct: 734 E-VRTVVMSAVSQHFRPEFINRIDELVIFHSLQKAQIRGIADIQLDRLRSRLSDRDMGLT 792
Query: 666 ISKAALKKISNIGFDLIYGAR 686
+ A + + GFD IYGAR
Sbjct: 793 VDDTAFDLLIDAGFDPIYGAR 813
>gi|407794890|ref|ZP_11141910.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina xiamenensis 10-D-4]
gi|407210650|gb|EKE80528.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina xiamenensis 10-D-4]
Length = 857
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/729 (58%), Positives = 562/729 (77%), Gaps = 21/729 (2%)
Query: 1 MGIKNNSLN------VNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+GI N+L G+ + Q EE L KYTIDLTE+A GKLDPVIGRD+EIR
Sbjct: 129 VGITKNALEKAIDDIRKGEKVEDQNAEEQRQALDKYTIDLTERAEQGKLDPVIGRDEEIR 188
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVLQRR+KNNPVLIG+PGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 189 RTIQVLQRRTKNNPVLIGDPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGALLAG 248
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
K+RGEFE+RLK +L E+S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGEL
Sbjct: 249 AKFRGEFEERLKAVLNELSKEEGQVILFIDELHTMVGAGKADGAMDAGNMLKPALARGEL 308
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
HC+GATTL+EYRQYIEKDAA ERRFQK+LV+EP + +TI+ILRGL+++YE+HH VEITDP
Sbjct: 309 HCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVADTIAILRGLKERYELHHAVEITDP 368
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AIVAA+ LS+RYISDR +PDKAIDLIDEA ++I+++IDSKPE +D+LERR+IQLK+E +A
Sbjct: 369 AIVAAASLSHRYISDRKLPDKAIDLIDEAGSRIRMQIDSKPEDLDRLERRIIQLKLEQQA 428
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+++E D++SKKRL L+++E+++ E K+ LE++W EK ++ +Q IK ++E+ R ++
Sbjct: 429 LQKEKDDASKKRLDLLQEELDEQERKFKELEEVWNTEKAAVQGTQNIKAQLEQARTDMDI 488
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R D +S+L+YG + LER Q D+ L +LLK +V EE+AE++SR
Sbjct: 489 ARRAGDLNRMSELQYGRIPALER------QLDLALQAEMQDMSLLKNRVTDEEVAEVLSR 542
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K+++ EREKLL +E L RVVGQ+EA+ AV+NAIRRSR+GLSD RP GSF+
Sbjct: 543 WTGIPVNKMLEGEREKLLQMEQQLHSRVVGQNEAVDAVANAIRRSRAGLSDPNRPIGSFL 602
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F+ + +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYL
Sbjct: 603 FLGPTGVGKTELSKALAQFLFDTDSAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYL 662
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS
Sbjct: 663 TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGS 722
Query: 595 DKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNIL 653
D I+E + E +K AVM+ + +FRPEF+NR+D+ +VF L++ NI IA IQL L
Sbjct: 723 DLIQEKANEHTYEEMKAAVMDVLVHHFRPEFLNRVDETVVFHPLSKANIKHIAEIQLQNL 782
Query: 654 KNKLLKMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIF 713
+L + + L++ AAL I++ GFD +YGAR + K+++ L ++P A I
Sbjct: 783 LQRLQERDYQLQLDDAALALIADAGFDPVYGARPL---KRAIQQQL-----ENPLAQRIL 834
Query: 714 LGDLINKGP 722
G+L P
Sbjct: 835 AGELTPDKP 843
>gi|343511111|ref|ZP_08748296.1| hypothetical protein VIS19158_01764 [Vibrio scophthalmi LMG 19158]
gi|343514770|ref|ZP_08751838.1| hypothetical protein VIBRN418_00225 [Vibrio sp. N418]
gi|342799458|gb|EGU35024.1| hypothetical protein VIS19158_01764 [Vibrio scophthalmi LMG 19158]
gi|342799507|gb|EGU35071.1| hypothetical protein VIBRN418_00225 [Vibrio sp. N418]
Length = 857
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + EE L+K+T+DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDPNAEELRQALEKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR+Y+E
Sbjct: 265 ELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRKYME 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDPALERRFQKVIVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+ E+DE+S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALINEHDEASEKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +A L+++W EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NNELLEKERDFAELDEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLSRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++Q + TLL+ KV EIA+++S+ TGIPV+K+++ E+EK
Sbjct: 505 RIPELEKQLDLATQAEMQ------EMTLLRNKVTDVEIADVLSKQTGIPVAKMLEAEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L KRV+GQ EA+ VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQVLHKRVIGQKEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ATFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E D + IK
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFNTLDYQGIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEF+NR+D+ +VF L +++I SIA IQL L ++ + +++S+
Sbjct: 739 NEVMEVVNKHFRPEFLNRVDESVVFHPLGQEHIKSIAAIQLLRLAKRMEERGYHMEVSEK 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL I+ +GFD +YGAR
Sbjct: 799 ALDLIAQVGFDPVYGAR 815
>gi|423125257|ref|ZP_17112936.1| chaperone ClpB [Klebsiella oxytoca 10-5250]
gi|376399224|gb|EHT11842.1| chaperone ClpB [Klebsiella oxytoca 10-5250]
Length = 857
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/709 (57%), Positives = 553/709 (77%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYSHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S
Sbjct: 739 DLVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHLSDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|90022193|ref|YP_528020.1| ClpB protein [Saccharophagus degradans 2-40]
gi|89951793|gb|ABD81808.1| ATPase AAA-2 [Saccharophagus degradans 2-40]
Length = 876
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/728 (58%), Positives = 562/728 (77%), Gaps = 34/728 (4%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + E + L+K+T+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGETVDDPEAEGNRQALEKFTVDLTARAEAGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLSLDLGSLLAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKQEGRIILFVDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP+ E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVQVDEPNEEDTIAILRGLKERYEVHHGVNITDSAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDE+A++I++EIDSKPE MDKLERRLIQLKIE EA+K++ D +SK+RL I
Sbjct: 385 QLPDKAIDLIDESASRIRMEIDSKPEEMDKLERRLIQLKIEREAVKKDEDIASKERLKKI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+IN++E +A+L++IW+ EK ++ SQ+IK +EK RL + A R D +S+L+YG
Sbjct: 445 DSQINEIEKSFADLDEIWRAEKAALQGSQEIKSHLEKARLDLEAARRAGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L +Q D+ ++ LL+ KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 505 IIPDLEKQLDMAAQADM------HEMKLLRNKVTEEEIAEVVSKWTGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ E++ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDDLHKRVIGQHESVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL+LLDE
Sbjct: 619 AEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM---------- 600
IEKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGS I+++
Sbjct: 679 IEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSSAIQDIAQNKSFDTIS 738
Query: 601 ---EKGDKE-------IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQL 650
E G +E +K AVM V +FRPEFINRID+ +VF L ++ I IA+IQL
Sbjct: 739 FDNESGAEEQNQYRYQAMKDAVMEVVTGHFRPEFINRIDEAVVFHPLAQQQIAGIADIQL 798
Query: 651 NILKNKLLKMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEAN 710
L+ +L + ++ L ++ + K++ GFD +YGAR + K+++ L+ ++P A
Sbjct: 799 ETLRKRLAERDLRLNVTPEVMAKLAEAGFDPVYGARPL---KRAIQQLV-----ENPLAQ 850
Query: 711 FIFLGDLI 718
I G+ I
Sbjct: 851 HILKGEFI 858
>gi|440286532|ref|YP_007339297.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium strain
FGI 57]
gi|440046054|gb|AGB77112.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium strain
FGI 57]
Length = 857
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/677 (59%), Positives = 537/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQNAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELEDKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNRVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L +I SIA IQL L +L + + +IS
Sbjct: 739 DLVLGVVSQSFRPEFINRIDEVVVFHPLGEAHIASIAQIQLQRLYKRLEERGYETQISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL +S G+D +YGAR
Sbjct: 799 ALHLLSKNGYDPVYGAR 815
>gi|188534765|ref|YP_001908562.1| protein disaggregation chaperone [Erwinia tasmaniensis Et1/99]
gi|188029807|emb|CAO97688.1| Chaperone ClpB [Erwinia tasmaniensis Et1/99]
Length = 859
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/680 (59%), Positives = 544/680 (80%), Gaps = 13/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGSEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLSLDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +Y+ LE+ WK EK + +Q IK E+E+ +L + +A R+ D +S+L+YG
Sbjct: 445 EGELNQKEREYSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHTRVIGQQEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGE-- 736
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM+ V FRPEFINRID+++VF L ++I SIA IQL L +L + L I
Sbjct: 737 -MKELVMSVVSHSFRPEFINRIDELVVFHPLGEQHIASIARIQLQRLYQRLEERGYTLHI 795
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL++++ G+D +YGAR
Sbjct: 796 SDAALQQLAENGYDPVYGAR 815
>gi|157369131|ref|YP_001477120.1| protein disaggregation chaperone [Serratia proteamaculans 568]
gi|157320895|gb|ABV39992.1| ATPase AAA-2 domain protein [Serratia proteamaculans 568]
Length = 857
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/677 (59%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDSVEEQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALSKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 SGELEQKEREYSELEEEWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + LL+ +V EIAE+++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEKQLAAATLAE------GKTMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+SAVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V +FRPEFINRID+++VF L +K+I IA IQL L +L + ++ +++
Sbjct: 739 ESVMEMVTHHFRPEFINRIDEVVVFHPLGQKHIAEIAKIQLARLYKRLEERGYEVTMTEP 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+ + GFD +YGAR
Sbjct: 799 ALELLGKTGFDPVYGAR 815
>gi|372269569|ref|ZP_09505617.1| clpB protein [Marinobacterium stanieri S30]
Length = 858
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/677 (60%), Positives = 547/677 (80%), Gaps = 5/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ EE L KY ID+TE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDSVDDPNAEETRQALDKYCIDMTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L KK+L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKRKKVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 ELAKQEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP E+TI+ILRGL+++YE+HHGV+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVIVDEPSEEDTIAILRGLKERYEIHHGVDITDSAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEA ++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE+++KRL +
Sbjct: 385 QLPDKAIDLVDEAGSRIRMEMDSKPEEMDRLDRRLIQLKMEREALKKEKDEATRKRLAEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ I+ LE +YA+ E++WK EK ++ SQQIKE++++ R+++ +A R D +S+L+YG
Sbjct: 445 EQTISTLEKEYADFEEVWKAEKASVQGSQQIKEQLDQARVEMEQARRAGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ ++ Q+ + LL+ KV EE+AE+VSR TGIPV+K+++ EREK
Sbjct: 505 KIPELEKQVQAADSSAQQV----EEHQLLRNKVTEEEVAEVVSRWTGIPVNKMLEGEREK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRVVGQ EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 561 LLRMEEALHKRVVGQSEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKTL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 621 ASFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNTI+VMTSNLGSD I+ + D ++K
Sbjct: 681 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTIVVMTSNLGSDLIQNYSDDDDYNLMK 740
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V +FRPE INRID+++VF L ++ + IA IQL L+ +L + + +K++
Sbjct: 741 SAVMEAVGTHFRPEVINRIDEVVVFHSLRKEQVAGIAEIQLERLRRRLAERELTIKLTST 800
Query: 670 ALKKISNIGFDLIYGAR 686
A+ K+ +GF+ IYGAR
Sbjct: 801 AMDKLVEVGFEPIYGAR 817
>gi|317049247|ref|YP_004116895.1| ATP-dependent chaperone ClpB [Pantoea sp. At-9b]
gi|316950864|gb|ADU70339.1| ATP-dependent chaperone ClpB [Pantoea sp. At-9b]
Length = 857
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/677 (60%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGAEDQRQALKKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQIDSKPEPLDRLDRRIIQLKLEQQALKKESDDASVKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+++ E +YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG
Sbjct: 445 ETELDQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLSLEQARRVGDLGQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPALEKQLAAATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHARVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYPEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRID+++VF L K+I SIA IQL L +L + L IS
Sbjct: 739 DLVMSVVGHHFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYQLHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
A++ + G+D +YGAR
Sbjct: 799 AIRLLGENGYDPVYGAR 815
>gi|89093544|ref|ZP_01166492.1| ClpB protein [Neptuniibacter caesariensis]
gi|89082234|gb|EAR61458.1| ClpB protein [Oceanospirillum sp. MED92]
Length = 859
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 545/677 (80%), Gaps = 4/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ EE+ L KY IDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVQDANAEENRQALDKYCIDLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K +L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKLVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 ELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EPD E TI+ILRGL+++YE+HH V+ITD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVQVDEPDEESTIAILRGLKERYEIHHSVDITDSAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++E+DSKPE MD+LERRLIQLK+E EA+K+E D ++K+RL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEMDSKPEDMDRLERRLIQLKMEREALKKEKDAAAKQRLAEL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ I +E ++++L+++WK EK ++ SQQIKEE++ R+++ K TR D Q +S+L+YG
Sbjct: 445 ESTIQSIEKEFSDLDEVWKAEKVALQGSQQIKEELDLARIELEKFTRAGDLQKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
K+ + K+ + + + LL+ KV EE+AE+VSR TGIPVSK+++ ER+K
Sbjct: 505 ---KIPELEKKLAAAAEAEESGQQEMKLLRNKVTEEEVAEVVSRWTGIPVSKMLEGERDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQ+EA++AVSNA+RRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 562 LLRMESTLHNRVVGQEEAVTAVSNAVRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 622 ASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNTI+VMTSNLGSD I+ + D +++
Sbjct: 682 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTIVVMTSNLGSDLIQNFSDDDDYQLMH 741
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM V ++FRPE INRID+++VF L + + IA IQL L+++L + + L ++
Sbjct: 742 NAVMEAVGVHFRPEVINRIDEVVVFHSLQKSQVAGIAKIQLQRLQSRLAERELSLTLTST 801
Query: 670 ALKKISNIGFDLIYGAR 686
A+ K+ ++GF+ IYGAR
Sbjct: 802 AMDKLVDVGFEPIYGAR 818
>gi|293392742|ref|ZP_06637060.1| chaperone protein ClpB [Serratia odorifera DSM 4582]
gi|291424601|gb|EFE97812.1| chaperone protein ClpB [Serratia odorifera DSM 4582]
Length = 857
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/717 (57%), Positives = 559/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDSVEDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++S+KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPEALDRLERRVIQLKLEQQALNKESDDASRKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 SSELEQKEREYSELEEEWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIAE++++ TGIPV+++++ ER+K
Sbjct: 505 KIPELEKQLAAATQAE------GKTMKLLRNRVTDAEIAEVLAKATGIPVARMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQDEA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRLEQELHSRVIGQDEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V +FRPEFINRID+++VF L +++I IA IQL L +L + + I++
Sbjct: 739 ESVMEMVSHHFRPEFINRIDEVVVFHPLGQQHIAEIAKIQLARLYQRLEERGYAVTITEP 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL + G+D +YGAR + K+++ ++I ++P A I G L+ P +LD
Sbjct: 799 ALTLLGKTGYDPVYGARPL---KRAIQ---QEI--ENPLAQQILSGALVPGKPVTLD 847
>gi|212712900|ref|ZP_03321028.1| hypothetical protein PROVALCAL_03997 [Providencia alcalifaciens DSM
30120]
gi|422019412|ref|ZP_16365960.1| protein disaggregation chaperone [Providencia alcalifaciens Dmel2]
gi|212684445|gb|EEB43973.1| hypothetical protein PROVALCAL_03997 [Providencia alcalifaciens DSM
30120]
gi|414103251|gb|EKT64829.1| protein disaggregation chaperone [Providencia alcalifaciens Dmel2]
Length = 857
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/718 (58%), Positives = 560/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVNDQSAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +Y+ LE+ WK EK + +Q IK E+E R+++ KA R D +S+L+YG
Sbjct: 445 EEELAEKEREYSALEEEWKAEKASLTGTQHIKAELENTRIEMEKARRNGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L+ ++ + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 505 RIPELEKQLEAATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLRMEQQLHQRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIGYSE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V FRPEFINRID+++VF L ++ I +IANIQL L +L + ++ +
Sbjct: 738 KDMVMEVVAHNFRPEFINRIDEVVVFHPLGKEQITNIANIQLARLYKRLEEHGYEVTATA 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AAL+KI GFD I+GAR + K+++ + ++P A I G LI P +LD
Sbjct: 798 AALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPITLD 847
>gi|312881919|ref|ZP_07741682.1| clpB protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370437|gb|EFP97926.1| clpB protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 858
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 537/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q EE L+K+TIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPV+
Sbjct: 145 GGQKVNDQNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNDEVPEGLRRRRVLSLDMGALVAGAKYRGEFEERLKSVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +DKLER++IQLKIE +A+ E+D +S+KRL+ +
Sbjct: 385 QLPDKAIDLIDEAASSIRLQMDSKPESLDKLERKIIQLKIEQQALTNEHDGASEKRLINL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E ++ LE++WK EK + +Q IK E+E+ R+ + A R D +S+L+YG
Sbjct: 445 NQELVDKERAFSELEEVWKAEKAALSGTQHIKTELEQARMDMEFARRAGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L +Q ++Q + TLLK KV EIA+++S+ TGIPVSK+++ E+ K
Sbjct: 505 RIPELERQLDLAAQAEMQ------EMTLLKNKVSDNEIADVLSKQTGIPVSKMLEAEKVK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ EA+ V+NAIRRSR+GLSD +P GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHDRVIGQSEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSETAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E + + +K
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQEGFATTNYQQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINR+D+ +VF L++ +I +IA IQL L ++ L+IS+
Sbjct: 739 EKVMEVVGKHFRPEFINRVDESVVFHPLSQDDIKAIALIQLAKLSERMKDNGYVLEISEQ 798
Query: 670 ALKKISNIGFDLIYGAR 686
A I+ +GFD IYGAR
Sbjct: 799 ASDLIAQVGFDPIYGAR 815
>gi|294650714|ref|ZP_06728066.1| ATP-dependent chaperone protein ClpB [Acinetobacter haemolyticus
ATCC 19194]
gi|292823398|gb|EFF82249.1| ATP-dependent chaperone protein ClpB [Acinetobacter haemolyticus
ATCC 19194]
Length = 859
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/693 (58%), Positives = 553/693 (79%), Gaps = 12/693 (1%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ + SL N+ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTSESLRKVIENIRGNDKVMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D+ SK + ++++I + + +Y +LE+IWK EKTL++ ++ + E+++ R+ + K
Sbjct: 426 VKKDQDDGSKAEVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARVALEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q +I N K L++TKV EIAE+VS
Sbjct: 486 AKREGDLAEAARLQYGVIPELQKRLE---QAEIAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLL++E+ L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMLQGEREKLLHMESFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNIL 653
++E+ E + ++ VM+ V +FRPEFINRID++++F L + I IA+IQL+ L
Sbjct: 721 QDVRELGETATDDEVRAVVMSAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRL 780
Query: 654 KNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+++L + +M L + A + + GFD +YGAR
Sbjct: 781 RSRLAERDMRLTVDDTAFDLLIDAGFDPVYGAR 813
>gi|337755940|ref|YP_004648451.1| ClpB protein [Francisella sp. TX077308]
gi|336447545|gb|AEI36851.1| ClpB protein [Francisella sp. TX077308]
Length = 860
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/676 (59%), Positives = 546/676 (80%), Gaps = 4/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + +Q E+ G L KYT+DLT+ A+ GK+DP+IGRD EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSNQNQEDMKGALDKYTVDLTDLAKKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP + KK+L LD+ LLAG K+RG+FE+RLK +LK
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINNEVPEGIKGKKVLSLDMGALLAGAKFRGDFEERLKSVLK 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EYR+Y+E
Sbjct: 265 ELAKQDGNVILFIDELHTMVGAGKSEGSMDAGNMLKPALARGELKCVGATTLDEYREYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+RYISDR
Sbjct: 325 KDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEA ++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KKRL ++
Sbjct: 385 QLPDKAIDLVDEAGSQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
K+EI LE +Y E++WK EK ++ + ++KE++EK + ++ K R D +S+L+YG
Sbjct: 445 KEEIKGLESEYKGFEELWKAEKLKMQGASKLKEKLEKAKFELEKYQRSGDLTKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE +K+ + + + N L++T V EIA++VS+ TGIPVSK+++ E+EK
Sbjct: 505 VIPELETQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMMEEEKEK 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD RP GSFMFLGPTGVGKTEL K L
Sbjct: 561 LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKAL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+ILLDE
Sbjct: 621 AEFLFDDQDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS KI+EM+ D E +K
Sbjct: 681 VEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHKIQEMQDQDYETVKS 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEF+NR+DD IVF LN++ I IA IQ+ L+ +L + + L+++ A
Sbjct: 741 AVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLTDLEIALEVTPNA 800
Query: 671 LKKISNIGFDLIYGAR 686
+ K+++ GFD ++GAR
Sbjct: 801 IDKLADAGFDPVFGAR 816
>gi|226953127|ref|ZP_03823591.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ATCC 27244]
gi|226836125|gb|EEH68508.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ATCC 27244]
Length = 859
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/693 (58%), Positives = 553/693 (79%), Gaps = 12/693 (1%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ + SL N+ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 VGVTSESLRKVIENIRGNDKVMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D+ SK + ++++I + + +Y +LE+IWK EKTL++ ++ + E+++ R+ + K
Sbjct: 426 VKKDQDDGSKAEVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARVALEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q +I N K L++TKV EIAE+VS
Sbjct: 486 AKREGDLAEAARLQYGVIPELQKRLE---QAEIAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLL++E+ L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMLQGEREKLLHMESFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEM-EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNIL 653
++E+ E + ++ VM+ V +FRPEFINRID++++F L + I IA+IQL+ L
Sbjct: 721 QDVRELGETATDDEVRAVVMSAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRL 780
Query: 654 KNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+++L + +M L + A + + GFD +YGAR
Sbjct: 781 RSRLAERDMRLTVDDTAFDLLIDAGFDPVYGAR 813
>gi|410638111|ref|ZP_11348676.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
lipolytica E3]
gi|410142308|dbj|GAC15881.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
lipolytica E3]
Length = 856
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/708 (59%), Positives = 558/708 (78%), Gaps = 15/708 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+KYT DLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQKVTDPNAEDVRQALEKYTTDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIIN EVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINSEVPEGLKNKRVLSLDMGSLVAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELSKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVDQPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S+KRL LI
Sbjct: 385 QLPDKAIDLIDEAASSIRLQMDSKPEDMDRLERRIIQLKLEEQALSKEKDEASQKRLELI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E + E K+A E IW+ EK+ ++ +Q IK E+E+ +L + A R SD +S+L+YG
Sbjct: 445 ELEREQAENKFAEFEAIWQAEKSAMQGTQHIKSELEQAKLDMEIARRASDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE L++ S+ + + LLK KV EIA+++SR TGIPV+K+++ E++K
Sbjct: 505 RIPELELKLEQASEAE------QTETQLLKNKVTEIEIADVLSRWTGIPVNKMLEGEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ EA++AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEESLQNRVIGQTEAVNAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AGFMFDTEQAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSN+GSD I++ ++ E +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNIGSDVIQDKHQESQYEEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V+ FRPEFINRIDD++VF L + I +IA IQL L+ +LL+ L++S+A
Sbjct: 739 ELVMRTVEQQFRPEFINRIDDVVVFHPLGLEQIKAIAKIQLLSLRQRLLEKGFKLELSQA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDL 717
AL+KI+ GFD +YGAR + K+++ + + ++P A + GD+
Sbjct: 799 ALEKIALAGFDPVYGARPL---KRAIQMEI-----ENPLAQRLLAGDM 838
>gi|425744089|ref|ZP_18862150.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-323]
gi|425491890|gb|EKU58167.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-323]
Length = 859
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/694 (58%), Positives = 551/694 (79%), Gaps = 14/694 (2%)
Query: 1 MGIKNNSL-----NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ SL N+ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIR
Sbjct: 126 IGVTPESLRKVIENIRGNDKVMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIR 185
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
R IQVL RR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+ LLAG
Sbjct: 186 RTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAG 245
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL
Sbjct: 246 AKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGEL 305
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
C+GATTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D
Sbjct: 306 RCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDS 365
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA+++S+RYI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA
Sbjct: 366 AIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEA 425
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K++ D SK + ++++I + + +Y +LE+IWK EKTL++ ++ + E+++ R + K
Sbjct: 426 VKKDEDAGSKAEVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARSALEK 485
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R+ D ++L+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS
Sbjct: 486 AKREGDLAEAARLQYGVIPELQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSA 540
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV+K++Q EREKLLN+E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+
Sbjct: 541 ATGIPVAKMLQGEREKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL 600
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
FLGPTGVGKTEL K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG L
Sbjct: 601 FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL 660
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS
Sbjct: 661 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS 720
Query: 595 DKIKEMEKG--DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNI 652
++E+ +G D E ++ VM+ V +FRPEFINRID++++F L + I IA+IQL+
Sbjct: 721 QDVRELGEGATDDE-VRAVVMSAVTQHFRPEFINRIDELVIFHSLQKAQIRGIADIQLDR 779
Query: 653 LKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L+ +L + +M L + A + + GFD +YGAR
Sbjct: 780 LRTRLSERDMGLTVDDTAFDLLIDAGFDPVYGAR 813
>gi|398795524|ref|ZP_10555375.1| ATP-dependent chaperone ClpB [Pantoea sp. YR343]
gi|398206177|gb|EJM92948.1| ATP-dependent chaperone ClpB [Pantoea sp. YR343]
Length = 857
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/677 (60%), Positives = 538/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G ++ Q E+ LKKYTIDLTE+A LGKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDSVNDQGAEDQRQALKKYTIDLTERAELGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRLQMDSKPESLDRLERRIIQLKLEQQALKKESDDASVKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+++ E +YA LE+ WK EK + +Q IK E+E+ RL + +A R D +S+L+YG
Sbjct: 445 ESELDQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLTMEQARRVGDLGQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEKQLAIATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLDYAEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINRIDD++VF L K+I SIA IQL L +L + L IS
Sbjct: 739 EVVMTVVGQHFRPEFINRIDDMVVFHPLGEKHIASIAQIQLQRLYKRLEERGYQLHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK + G+D +YGAR
Sbjct: 799 ALKLLGENGYDPVYGAR 815
>gi|261346206|ref|ZP_05973850.1| ATP-dependent chaperone protein ClpB [Providencia rustigianii DSM
4541]
gi|282565512|gb|EFB71047.1| ATP-dependent chaperone protein ClpB [Providencia rustigianii DSM
4541]
Length = 857
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/717 (58%), Positives = 559/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVNDQSAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +Y+ L++ WK EK + +Q IK E+E R+++ KA R D +S+L+YG
Sbjct: 445 EEELAEKEREYSALDEEWKAEKASLTGTQHIKAELENTRIEMEKARRMGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L+ ++ + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 505 RIPELEKQLEAATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLRMEQQLHQRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIDYSEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+++VF L ++ I +IANIQL L +L + ++ + A
Sbjct: 739 NMVMEVVSHNFRPEFINRIDEVVVFHPLGKEQIANIANIQLARLYKRLEEHGYEVTATAA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+KI GFD I+GAR + K+++ + ++P A I G LI P +LD
Sbjct: 799 ALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPITLD 847
>gi|259909394|ref|YP_002649750.1| protein disaggregation chaperone [Erwinia pyrifoliae Ep1/96]
gi|387872373|ref|YP_005803754.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
pyrifoliae DSM 12163]
gi|224965016|emb|CAX56546.1| Chaperone protein [Erwinia pyrifoliae Ep1/96]
gi|283479467|emb|CAY75383.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
pyrifoliae DSM 12163]
Length = 857
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/680 (59%), Positives = 542/680 (79%), Gaps = 13/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGSEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDEASIKRLKML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+++ E +Y+ LE+ WK EK + +Q IK ++E+ +L + +A R+ D +S+L+YG
Sbjct: 445 EGELSQKESEYSELEEEWKAEKASLSGTQHIKAQLEQAKLNMEQARRQGDLGQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPDLEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQQLHTRVIGQHEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGE-- 736
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM+ V FRPEFINRID+++VF L K+I SIA IQL L +L + L +
Sbjct: 737 -MKELVMSVVSHSFRPEFINRIDELVVFHPLGEKHIASIARIQLQRLYQRLEERGFTLHV 795
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL+++ G+D +YGAR
Sbjct: 796 SDAALQQLGENGYDPVYGAR 815
>gi|402758389|ref|ZP_10860645.1| clpB [Acinetobacter sp. NCTC 7422]
Length = 859
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/681 (59%), Positives = 545/681 (80%), Gaps = 9/681 (1%)
Query: 9 NVNGKN-ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G + ++S E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNN
Sbjct: 139 NIRGNDKVMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK
Sbjct: 199 PVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK +
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I + + +Y +LE+IWK EKTL++ ++ + E+++ R+ + KA R+ D ++L
Sbjct: 439 NHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARVALEKAKREGDLAEAARL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YG + +L++ L+ Q ++ N K L++TKV EIAE+VS TGIPV+K++Q E
Sbjct: 499 QYGVIPELQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
REKLLN+E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL
Sbjct: 554 REKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DK 605
DE+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G D
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGATDD 733
Query: 606 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
E ++ VMN V +FRPEFINRID++++F L + I IA+IQL+ L+ +L +M L
Sbjct: 734 E-VRTVVMNAVTQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRARLSDRDMGLT 792
Query: 666 ISKAALKKISNIGFDLIYGAR 686
+ A + + GFD +YGAR
Sbjct: 793 VDDTAFDILIDAGFDPVYGAR 813
>gi|56480150|ref|NP_708444.2| protein disaggregation chaperone [Shigella flexneri 2a str. 301]
gi|380865371|sp|Q7UBW5.2|CLPB_SHIFL RecName: Full=Chaperone protein ClpB
gi|56383701|gb|AAN44151.2| heat shock protein [Shigella flexneri 2a str. 301]
Length = 857
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/677 (59%), Positives = 540/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +++TI+ILRG+++++E+ H V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVQDTIAILRGVKERFELLHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L ++I SIA IQL L +L + ++ IS
Sbjct: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798
Query: 670 ALKKISNIGFDLIYGAR 686
ALK +S G+D +YGAR
Sbjct: 799 ALKLLSENGYDPVYGAR 815
>gi|383817288|ref|ZP_09972664.1| protein disaggregation chaperone [Serratia sp. M24T3]
gi|383293843|gb|EIC82201.1| protein disaggregation chaperone [Serratia sp. M24T3]
Length = 857
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/717 (56%), Positives = 554/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDSRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASIKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ L++ WK EK + +Q IK ++E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSGLDEEWKAEKASLTGTQNIKADLEQAKITLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDDLHKRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +FN++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFNSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDVIQQHFGEATYAQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V FRPEFINRID+++VF L +I IA IQL L +L + ++ A
Sbjct: 739 ESVMEVVTNNFRPEFINRIDEVVVFHPLGHAHIKHIAEIQLQRLYKRLEERGYSAHLTDA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + N GFD +YGAR + K+++ + ++P A I G LI P ++D
Sbjct: 799 ALELLGNTGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGKPITID 847
>gi|268593139|ref|ZP_06127360.1| ATP-dependent chaperone protein ClpB [Providencia rettgeri DSM
1131]
gi|291311412|gb|EFE51865.1| ATP-dependent chaperone protein ClpB [Providencia rettgeri DSM
1131]
Length = 857
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/718 (58%), Positives = 560/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVNDQSAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGE+P L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEIPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +Y+ LE+ WK EK + +Q IK E+E R+++ KA R D +S+L+YG
Sbjct: 445 EEELTEKEREYSALEEEWKAEKASLTGTQHIKAELENTRIEMEKARRMGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ ++ + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLRMEQQLHQRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIGYSE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V FRPEFINRID+++VF L ++ I +IANIQL L +L + ++ +
Sbjct: 738 KDMVMEVVSHSFRPEFINRIDEVVVFHPLGKEQITNIANIQLARLYKRLEEHGYEVSATP 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AAL+KI GFD I+GAR + K+++ + ++P A I G L+ P LD
Sbjct: 798 AALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLLPGKPVVLD 847
>gi|406941815|gb|EKD74201.1| hypothetical protein ACD_45C00035G0005 [uncultured bacterium]
Length = 862
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/677 (59%), Positives = 541/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ L+KYTIDLT +A GKLDPVIGRD EIRR IQVL RR+KNNPVL
Sbjct: 145 GGQTVQDPNVEDQRRALEKYTIDLTARAEQGKLDPVIGRDAEIRRTIQVLLRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLQDKRLLALDLGALIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQY+E
Sbjct: 265 DLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQ+ILV+EP + +TI+ILRGL+++YE+HHGVE+TD A+VAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQRILVDEPSVPDTIAILRGLKERYELHHGVEMTDSALVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE +D L+R+++QLKIE EA+K+E D++SKKRL +
Sbjct: 385 QLPDKAIDLIDEAASNIRMEIDSKPEELDNLDRKIVQLKIEREALKKETDDASKKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K++ K + + LE IWK EK+ ++ +Q IK E+E+ RL+ A R D +++L+YG
Sbjct: 445 EKDLQKWQSESDKLESIWKSEKSALQGAQTIKGELERARLEFETARRAGDLTRMAELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L S + Q + LL++KV EEIAE+VS+ T IPV+K+++ E+EK
Sbjct: 505 QIPELEKKLATASLAEKQ------ETQLLRSKVTEEEIAEVVSKWTHIPVAKMLESEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KR++GQ +A++A+ NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLKMEDALHKRIIGQSQAVTAICNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+ EE+++RIDMSEF+EKH+++RL+GAPPGY+GYEEGGYLTE+VRRKPYS++LLDE
Sbjct: 619 AAFLFDTEEAVVRIDMSEFMEKHAVARLVGAPPGYVGYEEGGYLTELVRRKPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD+ GRT++FRNTIIVMTSNLGS+ I+++ + GD +K
Sbjct: 679 MEKAHHDVFNILLQVLDDGRLTDSHGRTVDFRNTIIVMTSNLGSELIQDIAQHGDYFEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AV+ V +FRPEF+NRID+ +VF L+++ I IA+IQ L+ +L + L ++
Sbjct: 739 NAVLKVVGQHFRPEFMNRIDETVVFHPLDKEQIKDIADIQFQRLRMRLAEKEYGLTVTNE 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL +++ G+D +YGAR
Sbjct: 799 ALDYLASTGYDPVYGAR 815
>gi|384123457|ref|YP_005506077.1| Clp ATPase [Yersinia pestis D106004]
gi|262363053|gb|ACY59774.1| Clp ATPase [Yersinia pestis D106004]
Length = 733
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/717 (57%), Positives = 557/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 21 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 80
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 81 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLN 140
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 141 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 200
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 201 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 260
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 261 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 320
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 321 NTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYG 380
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + + LL+ +V E+AE+++R TGIPVS++++ ER+K
Sbjct: 381 TIPELEKQLAAATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLESERDK 434
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 435 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 494
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 495 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 554
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 555 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMK 614
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRID+++VF L R ++ SIANIQL L +L + ++KI++
Sbjct: 615 TVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQP 674
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 675 ALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVTLD 723
>gi|51595198|ref|YP_069389.1| protein disaggregation chaperone [Yersinia pseudotuberculosis IP
32953]
gi|108808757|ref|YP_652673.1| protein disaggregation chaperone [Yersinia pestis Antiqua]
gi|108810986|ref|YP_646753.1| protein disaggregation chaperone [Yersinia pestis Nepal516]
gi|145600170|ref|YP_001164246.1| protein disaggregation chaperone [Yersinia pestis Pestoides F]
gi|153947726|ref|YP_001402169.1| protein disaggregation chaperone [Yersinia pseudotuberculosis IP
31758]
gi|153997675|ref|ZP_02022775.1| Clp ATPase [Yersinia pestis CA88-4125]
gi|162419640|ref|YP_001607805.1| protein disaggregation chaperone [Yersinia pestis Angola]
gi|165926588|ref|ZP_02222420.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. F1991016]
gi|166009977|ref|ZP_02230875.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213111|ref|ZP_02239146.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399363|ref|ZP_02304887.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421665|ref|ZP_02313418.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167423529|ref|ZP_02315282.1| chaperone ClpB [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167470275|ref|ZP_02334979.1| protein disaggregation chaperone [Yersinia pestis FV-1]
gi|170025564|ref|YP_001722069.1| protein disaggregation chaperone [Yersinia pseudotuberculosis
YPIII]
gi|186894216|ref|YP_001871328.1| protein disaggregation chaperone [Yersinia pseudotuberculosis
PB1/+]
gi|229838891|ref|ZP_04459050.1| Clp ATPase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896559|ref|ZP_04511726.1| Clp ATPase [Yersinia pestis Pestoides A]
gi|229899458|ref|ZP_04514601.1| Clp ATPase [Yersinia pestis biovar Orientalis str. India 195]
gi|229901202|ref|ZP_04516325.1| Clp ATPase [Yersinia pestis Nepal516]
gi|270489387|ref|ZP_06206461.1| ATP-dependent chaperone protein ClpB [Yersinia pestis KIM D27]
gi|294504989|ref|YP_003569051.1| Clp ATPase [Yersinia pestis Z176003]
gi|384127314|ref|YP_005509928.1| Clp ATPase [Yersinia pestis D182038]
gi|384138885|ref|YP_005521587.1| protein disaggregation chaperone [Yersinia pestis A1122]
gi|384415963|ref|YP_005625325.1| Clp ATPase [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|420548363|ref|ZP_15046177.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-01]
gi|420553708|ref|ZP_15050949.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-02]
gi|420559314|ref|ZP_15055821.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-03]
gi|420564702|ref|ZP_15060658.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-04]
gi|420569749|ref|ZP_15065242.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-05]
gi|420575407|ref|ZP_15070361.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-06]
gi|420580714|ref|ZP_15075187.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-07]
gi|420586076|ref|ZP_15080044.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-08]
gi|420591186|ref|ZP_15084638.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-09]
gi|420596572|ref|ZP_15089481.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-10]
gi|420607664|ref|ZP_15099430.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-12]
gi|420613051|ref|ZP_15104260.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-13]
gi|420618438|ref|ZP_15108953.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-14]
gi|420623734|ref|ZP_15113729.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-15]
gi|420628814|ref|ZP_15118338.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-16]
gi|420633939|ref|ZP_15122930.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-19]
gi|420639152|ref|ZP_15127623.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-25]
gi|420644612|ref|ZP_15132606.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-29]
gi|420649905|ref|ZP_15137388.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-32]
gi|420655541|ref|ZP_15142452.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-34]
gi|420661053|ref|ZP_15147383.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-36]
gi|420666330|ref|ZP_15152136.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-42]
gi|420671193|ref|ZP_15156570.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-45]
gi|420676540|ref|ZP_15161430.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-46]
gi|420682170|ref|ZP_15166514.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-47]
gi|420687501|ref|ZP_15171252.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-48]
gi|420692731|ref|ZP_15175841.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-52]
gi|420698491|ref|ZP_15180908.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-53]
gi|420704343|ref|ZP_15185556.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-54]
gi|420709667|ref|ZP_15190294.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-55]
gi|420715143|ref|ZP_15195157.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-56]
gi|420720653|ref|ZP_15199880.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-58]
gi|420726119|ref|ZP_15204693.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-59]
gi|420731705|ref|ZP_15209713.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-60]
gi|420736721|ref|ZP_15214245.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-61]
gi|420742197|ref|ZP_15219166.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-63]
gi|420753353|ref|ZP_15228856.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-65]
gi|420759153|ref|ZP_15233516.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-66]
gi|420764404|ref|ZP_15238135.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-71]
gi|420769637|ref|ZP_15242829.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-72]
gi|420774617|ref|ZP_15247339.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-76]
gi|420780234|ref|ZP_15252283.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-88]
gi|420785835|ref|ZP_15257175.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-89]
gi|420790971|ref|ZP_15261792.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-90]
gi|420796494|ref|ZP_15266757.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-91]
gi|420801561|ref|ZP_15271310.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-92]
gi|420806908|ref|ZP_15276153.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-93]
gi|420817777|ref|ZP_15285946.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-95]
gi|420823093|ref|ZP_15290713.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-96]
gi|420828176|ref|ZP_15295282.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-98]
gi|420833864|ref|ZP_15300421.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-99]
gi|420838725|ref|ZP_15304812.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-100]
gi|420843920|ref|ZP_15309529.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-101]
gi|420849585|ref|ZP_15314612.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-102]
gi|420855254|ref|ZP_15319408.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-103]
gi|420860444|ref|ZP_15323983.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-113]
gi|421764775|ref|ZP_16201563.1| protein disaggregation chaperone [Yersinia pestis INS]
gi|51588480|emb|CAH20088.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
system with DnaK, DnaJ, and GrpE [Yersinia
pseudotuberculosis IP 32953]
gi|108774634|gb|ABG17153.1| Clp ATPase [Yersinia pestis Nepal516]
gi|108780670|gb|ABG14728.1| Clp ATPase [Yersinia pestis Antiqua]
gi|145211866|gb|ABP41273.1| Clp ATPase [Yersinia pestis Pestoides F]
gi|149289312|gb|EDM39392.1| Clp ATPase [Yersinia pestis CA88-4125]
gi|152959221|gb|ABS46682.1| chaperone ClpB [Yersinia pseudotuberculosis IP 31758]
gi|162352455|gb|ABX86403.1| chaperone ClpB [Yersinia pestis Angola]
gi|165921516|gb|EDR38713.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. F1991016]
gi|165990884|gb|EDR43185.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205898|gb|EDR50378.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960584|gb|EDR56605.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167051867|gb|EDR63275.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057699|gb|EDR67445.1| chaperone ClpB [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169752098|gb|ACA69616.1| ATP-dependent chaperone ClpB [Yersinia pseudotuberculosis YPIII]
gi|186697242|gb|ACC87871.1| ATP-dependent chaperone ClpB [Yersinia pseudotuberculosis PB1/+]
gi|229681927|gb|EEO78020.1| Clp ATPase [Yersinia pestis Nepal516]
gi|229687860|gb|EEO79933.1| Clp ATPase [Yersinia pestis biovar Orientalis str. India 195]
gi|229695257|gb|EEO85304.1| Clp ATPase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700337|gb|EEO88369.1| Clp ATPase [Yersinia pestis Pestoides A]
gi|262366978|gb|ACY63535.1| Clp ATPase [Yersinia pestis D182038]
gi|270337891|gb|EFA48668.1| ATP-dependent chaperone protein ClpB [Yersinia pestis KIM D27]
gi|294355448|gb|ADE65789.1| Clp ATPase [Yersinia pestis Z176003]
gi|320016467|gb|ADW00039.1| Clp ATPase [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|342854014|gb|AEL72567.1| protein disaggregation chaperone [Yersinia pestis A1122]
gi|391423090|gb|EIQ85605.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-01]
gi|391423345|gb|EIQ85839.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-02]
gi|391423480|gb|EIQ85958.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-03]
gi|391438151|gb|EIQ98939.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-04]
gi|391439203|gb|EIQ99882.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-05]
gi|391443012|gb|EIR03370.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-06]
gi|391454927|gb|EIR14087.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-07]
gi|391455840|gb|EIR14924.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-08]
gi|391457773|gb|EIR16690.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-09]
gi|391470814|gb|EIR28445.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-10]
gi|391473165|gb|EIR30566.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-12]
gi|391486889|gb|EIR42879.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-13]
gi|391488482|gb|EIR44325.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-15]
gi|391488509|gb|EIR44344.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-14]
gi|391502865|gb|EIR57119.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-16]
gi|391503067|gb|EIR57296.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-19]
gi|391508126|gb|EIR61897.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-25]
gi|391518865|gb|EIR71549.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-29]
gi|391520255|gb|EIR72819.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-34]
gi|391521247|gb|EIR73729.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-32]
gi|391533240|gb|EIR84536.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-36]
gi|391536320|gb|EIR87315.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-42]
gi|391538825|gb|EIR89599.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-45]
gi|391551799|gb|EIS01281.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-46]
gi|391551880|gb|EIS01352.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-47]
gi|391552363|gb|EIS01793.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-48]
gi|391566625|gb|EIS14594.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-52]
gi|391567817|gb|EIS15635.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-53]
gi|391572166|gb|EIS19427.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-54]
gi|391581134|gb|EIS27050.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-55]
gi|391583185|gb|EIS28870.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-56]
gi|391593775|gb|EIS38035.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-58]
gi|391596756|gb|EIS40654.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-60]
gi|391597876|gb|EIS41656.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-59]
gi|391611119|gb|EIS53327.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-61]
gi|391611657|gb|EIS53811.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-63]
gi|391624356|gb|EIS65004.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-65]
gi|391628755|gb|EIS68776.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-66]
gi|391635025|gb|EIS74231.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-71]
gi|391637031|gb|EIS75996.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-72]
gi|391647158|gb|EIS84820.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-76]
gi|391650621|gb|EIS87885.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-88]
gi|391655003|gb|EIS91787.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-89]
gi|391659979|gb|EIS96191.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-90]
gi|391667560|gb|EIT02880.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-91]
gi|391677021|gb|EIT11368.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-93]
gi|391677724|gb|EIT12005.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-92]
gi|391691050|gb|EIT24012.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-95]
gi|391694003|gb|EIT26705.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-96]
gi|391695490|gb|EIT28056.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-98]
gi|391707961|gb|EIT39259.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-99]
gi|391711122|gb|EIT42111.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-100]
gi|391712084|gb|EIT42995.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-101]
gi|391723962|gb|EIT53588.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-102]
gi|391724696|gb|EIT54249.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-103]
gi|391727374|gb|EIT56603.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-113]
gi|411174326|gb|EKS44359.1| protein disaggregation chaperone [Yersinia pestis INS]
Length = 857
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/717 (57%), Positives = 559/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + + LL+ +V E+AE+++R TGIPVS++++ ER+K
Sbjct: 505 TIPELEKQLAAATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRID+++VF L R ++ SIANIQL L +L + ++KI++
Sbjct: 739 TVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQP 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ ++I ++P A I G LI P +LD
Sbjct: 799 ALEFLGEAGFDPVYGARPL---KRAIQ---QEI--ENPLAQQILSGKLIPGIPVTLD 847
>gi|422009842|ref|ZP_16356824.1| protein disaggregation chaperone [Providencia rettgeri Dmel1]
gi|414092015|gb|EKT53694.1| protein disaggregation chaperone [Providencia rettgeri Dmel1]
Length = 857
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/718 (58%), Positives = 560/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVNDQSAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGE+P L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEIPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +Y+ LE+ WK EK + +Q IK E+E R+++ KA R D +S+L+YG
Sbjct: 445 EEELAEKEREYSALEEEWKAEKASLTGTQHIKAELENTRIEMEKARRMGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ ++ + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLEAATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLRMEQQLHQRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E G E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIGYSE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V FRPEFINRID+++VF L ++ I +IANIQL L +L + ++ +
Sbjct: 738 KDMVMEVVSHSFRPEFINRIDEVVVFHPLGKEQITNIANIQLARLYKRLEEHGYEVSATP 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AAL+KI GFD I+GAR + K+++ + ++P A I G L+ P LD
Sbjct: 798 AALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLLPGKPVILD 847
>gi|406979232|gb|EKE01059.1| hypothetical protein ACD_21C00227G0001 [uncultured bacterium]
Length = 867
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/676 (60%), Positives = 547/676 (80%), Gaps = 6/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E L+KYTID T +A GK+DPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 144 GGEGVSDAGAENQRQALEKYTIDFTARASQGKMDPVIGRDDEIRRTIQVLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI+EGLAQRIINGEVP+ L +K +L LD+ L+AGTK+RGEFE+RLK ++
Sbjct: 204 IGEPGVGKTAIIEGLAQRIINGEVPDGLKNKLVLALDMGTLIAGTKFRGEFEERLKSVIN 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI + II+FIDELH ++G GK EGS+DAGNMLKP L+RGEL CIGATTL+EYR+YIE
Sbjct: 264 EIVKAEGQIILFIDELHMVVGAGKAEGSMDAGNMLKPALARGELRCIGATTLDEYRKYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP + +TI+ILRGL++KYEVHHGV+I+D AIVAA+ LS+RYI+DR
Sbjct: 324 KDAALERRFQKVLVDEPSVTDTIAILRGLKEKYEVHHGVDISDSAIVAAATLSHRYITDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++E+DSKPE +D+L R++IQLKIE EA+K+E DE+SK+RL+ +
Sbjct: 384 NLPDKAIDLIDEAASRIRMEMDSKPEDLDRLNRKIIQLKIEREALKKETDEASKQRLVDL 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K+++ LE +Y++L+++WK EK ++ Q+IKE++++ +L++ A RK D +S+L+YG
Sbjct: 444 EKQLSGLEKEYSSLDEVWKKEKATVQSEQKIKEDLDQAKLELEAAQRKMDLAKMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L+ Q + ++ L++ KV EE+AE+VS+ T IPVSK+++ E+EK
Sbjct: 504 KIPALEKQLQAALQAE------KSEMHLVRNKVTEEEVAEVVSKWTHIPVSKMLEGEKEK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E+ L KRV+GQDEA+ AV++AIRRSR+GL+D +P GSFMFLGPTGVGKTE CKTL
Sbjct: 558 LLHMEDALHKRVIGQDEAVKAVADAIRRSRAGLADPNKPIGSFMFLGPTGVGKTETCKTL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RRKPY++ILLDE
Sbjct: 618 AEFLFDTEDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRKPYAVILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRN +IVMTSNLGS I+E K + IK
Sbjct: 678 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNCVIVMTSNLGSQYIQEFAKDGYDKIKK 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEFINR+DDI+VF L+ K I IANIQ+ L+ +L + ++ +++S A
Sbjct: 738 AVMEAVSKHFRPEFINRVDDIVVFHGLDSKQIHKIANIQIERLQKRLAERDLQIEVSDKA 797
Query: 671 LKKISNIGFDLIYGAR 686
L ++ GFD +YGAR
Sbjct: 798 LDYLAEAGFDPVYGAR 813
>gi|22124822|ref|NP_668245.1| protein disaggregation chaperone [Yersinia pestis KIM10+]
gi|45440507|ref|NP_992046.1| protein disaggregation chaperone [Yersinia pestis biovar Microtus
str. 91001]
gi|21957649|gb|AAM84496.1|AE013694_1 heat shock protein [Yersinia pestis KIM10+]
gi|45435364|gb|AAS60923.1| Clp ATPase [Yersinia pestis biovar Microtus str. 91001]
Length = 864
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/717 (57%), Positives = 559/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 152 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 211
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 212 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLN 271
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 272 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 331
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 332 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 391
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 392 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 451
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 452 NTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYG 511
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + + LL+ +V E+AE+++R TGIPVS++++ ER+K
Sbjct: 512 TIPELEKQLAAATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLESERDK 565
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 566 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 625
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 626 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 685
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 686 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMK 745
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRID+++VF L R ++ SIANIQL L +L + ++KI++
Sbjct: 746 TVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQP 805
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ ++I ++P A I G LI P +LD
Sbjct: 806 ALEFLGEAGFDPVYGARPL---KRAIQ---QEI--ENPLAQQILSGKLIPGIPVTLD 854
>gi|218930300|ref|YP_002348175.1| protein disaggregation chaperone [Yersinia pestis CO92]
gi|54035780|sp|Q74X11.2|CLPB_YERPE RecName: Full=Chaperone protein ClpB
gi|115348911|emb|CAL21868.1| Clp ATPase [Yersinia pestis CO92]
Length = 857
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/717 (57%), Positives = 557/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + + LL+ +V E+AE+++R TGIPVS++++ ER+K
Sbjct: 505 TIPELEKQLAAATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLKSERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRID+++VF L R ++ SIANIQL L +L + ++KI++
Sbjct: 739 TVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQP 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 799 ALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVTLD 847
>gi|292487321|ref|YP_003530193.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora CFBP1430]
gi|291552740|emb|CBA19785.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora CFBP1430]
gi|312171427|emb|CBX79686.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ATCC BAA-2158]
Length = 857
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/680 (59%), Positives = 541/680 (79%), Gaps = 13/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGSEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ + E +Y+ LE+ WK EK + +Q IK E+E+ +L + +A R+ D +S+L+YG
Sbjct: 445 EGELGQKESEYSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPDLEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHTRVIGQQEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALNYGE-- 736
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM+ V FRPEFINRID+++VF L ++I SIA IQL L +L + L +
Sbjct: 737 -MKELVMSVVSQNFRPEFINRIDELVVFHPLGEEHIASIARIQLQRLYQRLEERGFTLHV 795
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL+++ G+D +YGAR
Sbjct: 796 SDAALQQLGENGYDPVYGAR 815
>gi|37525237|ref|NP_928581.1| protein disaggregation chaperone [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|54035796|sp|Q7N788.1|CLPB_PHOLL RecName: Full=Chaperone protein ClpB
gi|36784664|emb|CAE13564.1| heat shock protein F84.1 [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 857
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/718 (57%), Positives = 560/718 (77%), Gaps = 15/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVDDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E R+ + +A R D +S+++YG
Sbjct: 445 NEELLVKEREYSELEEEWKAEKAALTGTQHIKAELENARISLEQARRSGDLAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + + LL+ KV EIA+I++R TGIPV+++++ E++K
Sbjct: 505 KIPGLEKQLAAATQAE------SKHMKLLRNKVTDAEIADILARWTGIPVARMLESEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQDEA++A+SNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHKRVIGQDEAVNAISNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDMIQERFGSLNYDEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V FRPEFINRID+ +VF L R+++ +IA+IQL L +L + + I++
Sbjct: 739 DIVMGIVSHNFRPEFINRIDEAVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVTITQQ 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
AL+ ++ GFD +YGAR + K+++ + ++P A I G L+ P +LD
Sbjct: 799 ALEILAEAGFDPVYGARPL---KRAIQQEI-----ENPLAQKILSGQLLPGKPVTLDV 848
>gi|71281252|ref|YP_270571.1| ATP-dependent chaperone protein ClpB [Colwellia psychrerythraea
34H]
gi|71146992|gb|AAZ27465.1| ATP-dependent chaperone protein ClpB [Colwellia psychrerythraea
34H]
Length = 861
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/678 (59%), Positives = 545/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ L KYT+DLTE A GKLDPVIGRDDEIRR +QVLQRR+KNNPVL
Sbjct: 145 GGENVDDQNAEDVRQALNKYTVDLTELAEHGKLDPVIGRDDEIRRTLQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IG+PGVGKTAIVEGLAQRI+N EVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGQPGVGKTAIVEGLAQRIVNNEVPEGLKNKRVLSLDMGSLVAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYR+YIE
Sbjct: 265 ELSKEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVNITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERRLIQLK+E A++++ DE++ KRL +I
Sbjct: 385 QLPDKAIDLIDEAASSIRLQMDSKPEDLDRLERRLIQLKLEQRALEKDEDEATIKRLAII 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++I++ + KY L+++W EK + + IKEE+E+ R+++ A R D +S+L+YG
Sbjct: 445 SQQISEKQKKYDELDEVWTTEKAALYGAHTIKEELEQARIELEAARRTGDLNRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L SQ ++Q + TLL KV EIA+++SR TGIPV+K+++ ER+K
Sbjct: 505 KLPELEKQLDLASQAEMQ------EMTLLANKVTEVEIADVLSRATGIPVAKMLEQERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E+ L + V+GQ EA+++VSNAIRRSR+GLSD +P GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLHMEDNLHQNVIGQHEAVTSVSNAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++++++IR+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDSQDALIRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--I 608
IEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSN+GSD I+E+ G+ + +
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNIGSDIIQEL-AGESQYHQM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VMN + +F+PEFINR+D+ +VF L + I IA IQ+ L ++L++ ++L I++
Sbjct: 738 KEEVMNTLGQHFKPEFINRVDESVVFHPLVAEQIKKIAKIQIEALADRLIEQELNLTINE 797
Query: 669 AALKKISNIGFDLIYGAR 686
AL IS GFD I+GAR
Sbjct: 798 EALSLISAAGFDPIFGAR 815
>gi|123441247|ref|YP_001005234.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420257395|ref|ZP_14760155.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088208|emb|CAL10996.1| Clp ATPase [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|404515185|gb|EKA28960.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 857
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/718 (57%), Positives = 556/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKAALTGTQNIKTELEQAKISLEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + LL+ +V EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++
Sbjct: 738 KEMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQ 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 798 PALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVTLD 847
>gi|421727045|ref|ZP_16166211.1| protein disaggregation chaperone [Klebsiella oxytoca M5al]
gi|410372260|gb|EKP26975.1| protein disaggregation chaperone [Klebsiella oxytoca M5al]
Length = 857
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/709 (57%), Positives = 551/709 (77%), Gaps = 15/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ Q E+ LKK+T+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +++L LD+ L+AG KYRGEFE RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEVRLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIV A+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVEAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIKRLDML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ + +Q + LL+ KV EIAE+++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQMAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALDYSHMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINRID+++VF L K+I SIA IQL L +L + ++ +S
Sbjct: 739 DLVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHLSDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
ALK +S G+D +YGAR + K+++ + ++P A I G+LI
Sbjct: 799 ALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839
>gi|383936980|ref|ZP_09990396.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rheinheimera
nanhaiensis E407-8]
gi|383701961|dbj|GAB60487.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rheinheimera
nanhaiensis E407-8]
Length = 858
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/701 (57%), Positives = 552/701 (78%), Gaps = 15/701 (2%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L KYT+DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LTKYTVDLTARAEAGKLDPVIGRDEEIRRCIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
RI+N EVP L K++L LD+ LLAG KYRGEFE+RLK +L E++ + +I+FIDE+
Sbjct: 221 LRIVNKEVPEGLKDKRVLSLDMGSLLAGAKYRGEFEERLKAVLNELAKEEGQVILFIDEI 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE +D+LERR+IQLK+E A+ +E DE++KKR +I+++I +L+ KY L++
Sbjct: 401 IRMQMDSKPEELDRLERRIIQLKLEDNALAKETDEATKKRRDMIQEQIRELDAKYNELDE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+W+ EK ++ +Q IK E+E+ RL + A R SD Q +S+L+YG + +LE+ L SQ +
Sbjct: 461 VWESEKAALQGTQNIKTELEQARLDLEVARRASDLQRMSELQYGRIPELEKKLDLASQAE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ ++ TLL+ KV +EIA+++S+ TGIPVSK+++ ER+KLL +E L +V+GQD
Sbjct: 521 M------HENTLLRNKVTEQEIADVLSKATGIPVSKMLEGERDKLLRMEQALHDKVIGQD 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA++AVS+AIRRSR+ L+D +P GSF+FLGPTGVGKTEL K+L+ +F++ ++++RIDM
Sbjct: 575 EAVTAVSHAIRRSRACLADPNKPIGSFLFLGPTGVGKTELTKSLANFLFDSPDAMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + +K +M + FRPEF+
Sbjct: 695 DDGRLTDGQGRTVDFKNTVIIMTSNLGSDLIQEHYREYSYSQMKEMLMGVLSKQFRPEFL 754
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+ +VF L+ + I SIA IQL L+ +L + IS AAL K++ +GFD +YGA
Sbjct: 755 NRLDETVVFHPLDSRQIRSIARIQLARLEQRLAERQYQFSISDAALDKLAEVGFDPLYGA 814
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
R + K+++ + H ++P A + GD+ +LD
Sbjct: 815 RPL---KRAI-----QQHLENPLAQALLQGDVPPGSTVALD 847
>gi|238765381|ref|ZP_04626305.1| Chaperone protein clpB 1 [Yersinia kristensenii ATCC 33638]
gi|238696423|gb|EEP89216.1| Chaperone protein clpB 1 [Yersinia kristensenii ATCC 33638]
Length = 857
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/718 (57%), Positives = 556/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKAALTGTQNIKTELEQAKITLEQARRVGDLAQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + LL+ +V EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AMFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++
Sbjct: 738 KEMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLARLYKRLEERGYQVTITQ 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 798 PALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVTLD 847
>gi|332160283|ref|YP_004296860.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664513|gb|ADZ41157.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 857
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/718 (57%), Positives = 556/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKAALTGTQNIKTELEQAKISLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + LL+ +V EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++
Sbjct: 738 KEMVMEVVTRHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQ 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 798 PALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVTLD 847
>gi|386309637|ref|YP_006005693.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|418243771|ref|ZP_12870225.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433551271|ref|ZP_20507314.1| ClpB protein [Yersinia enterocolitica IP 10393]
gi|318604489|emb|CBY25987.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|330863598|emb|CBX73708.1| chaperone protein clpB [Yersinia enterocolitica W22703]
gi|351776724|gb|EHB19022.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431788370|emb|CCO70354.1| ClpB protein [Yersinia enterocolitica IP 10393]
Length = 857
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/718 (57%), Positives = 556/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKAALTGTQNIKTELEQAKISLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + LL+ +V EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++
Sbjct: 738 KEMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQ 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 798 PALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVTLD 847
>gi|428784253|ref|ZP_19001745.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ACW56400]
gi|426277392|gb|EKV55118.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ACW56400]
Length = 836
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/680 (59%), Positives = 541/680 (79%), Gaps = 13/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 124 GGENVNDQGSEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 183
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 184 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 243
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 244 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 303
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 304 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 363
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 364 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIKRLEML 423
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ + E +Y+ LE+ WK EK + +Q IK E+E+ +L + +A R+ D +S+L+YG
Sbjct: 424 EGELGQKESEYSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMSELQYG 483
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 484 KIPDLEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 537
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 538 LLRMEQELHTRVIGQQEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 597
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 598 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 657
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+
Sbjct: 658 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALNYGE-- 715
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM+ V FRPEFINRID+++VF L ++I SIA IQL L +L + L +
Sbjct: 716 -MKELVMSVVSQNFRPEFINRIDELVVFHPLGEEHIASIARIQLQRLYQRLEERGFTLHV 774
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL+++ G+D +YGAR
Sbjct: 775 SDAALQQLGENGYDPVYGAR 794
>gi|300722275|ref|YP_003711559.1| ATP-dependent protease [Xenorhabdus nematophila ATCC 19061]
gi|297628776|emb|CBJ89354.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Xenorhabdus nematophila ATCC
19061]
Length = 857
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/677 (60%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVNDQSAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGSIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E R+++ +A R D +S+++YG
Sbjct: 445 NAELTEKEREYSELEEEWKAEKAELSGTQNIKAELENARIELERARRSGDLAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + + LL+ KV EIAEI++R TGIPVS++++ E++K
Sbjct: 505 KIPELEKRLATATASE------NHHMKLLRNKVTDSEIAEILARWTGIPVSRMLESEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHKRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRTI+FRNT+++MTSNLGSD I+E D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTIDFRNTVVIMTSNLGSDMIQERFGSLDYAGMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINRID+I+VF L +++++SIANIQL L +L + + ++ +
Sbjct: 739 DMVMEVVGHHFRPEFINRIDEIVVFHPLGKEHLVSIANIQLQRLYQRLEERGYQVVMTPS 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL K+S GFD +YGAR
Sbjct: 799 ALDKLSEAGFDPVYGAR 815
>gi|307132185|ref|YP_003884201.1| ClpB protein [Dickeya dadantii 3937]
gi|306529714|gb|ADM99644.1| ClpB protein [Dickeya dadantii 3937]
Length = 857
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/718 (56%), Positives = 558/718 (77%), Gaps = 15/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQQVNEQSAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 KLPDKAIDLIDEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLKRLEIL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK +E+ ++ + +A R+ D +S+L+YG
Sbjct: 445 NAELEQKEREYSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIAE+++R TGIPVS++++ EREK
Sbjct: 505 KIPELEKQLAAATQVE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AV+N+IRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + ++
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEMNYNQMR 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V++ V +F EFI ID+++VF L + +I SIA IQL L ++ + + IS A
Sbjct: 739 DMVLSVVSHHFCHEFIICIDEVVVFHPLGKSHITSIAQIQLQRLYKRMEERGYTVTISDA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDT 727
AL+ + GFD +YGAR + K+++ ++ ++P A I G L+ P +LD
Sbjct: 799 ALELLGKSGFDPVYGARPL---KRAIQQMI-----ENPLAQQILSGALVPGKPVTLDA 848
>gi|292900313|ref|YP_003539682.1| chaperone ClpB [Erwinia amylovora ATCC 49946]
gi|291200161|emb|CBJ47287.1| chaperone ClpB (heat shock protein) [Erwinia amylovora ATCC 49946]
Length = 857
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/680 (59%), Positives = 541/680 (79%), Gaps = 13/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGSEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ + E +Y+ LE+ WK EK + +Q IK E+E+ +L + +A R+ D +S+L+YG
Sbjct: 445 EGELGQKESEYSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPDLEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ EA+ AVS+AIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHTRVIGQQEAVEAVSDAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALNYGE-- 736
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM+ V FRPEFINRID+++VF L ++I SIA IQL L +L + L +
Sbjct: 737 -MKELVMSVVSQNFRPEFINRIDELVVFHPLGEEHIASIARIQLQRLYQRLEERGFTLHV 795
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL+++ G+D +YGAR
Sbjct: 796 SDAALQQLGENGYDPVYGAR 815
>gi|385787426|ref|YP_005818535.1| protein disaggregation chaperone [Erwinia sp. Ejp617]
gi|310766698|gb|ADP11648.1| protein disaggregation chaperone [Erwinia sp. Ejp617]
Length = 857
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/680 (59%), Positives = 541/680 (79%), Gaps = 13/680 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGENVNDQGSEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDEASIKRLKML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+++ E +Y+ LE+ WK EK + +Q IK ++E+ +L + +A R+ D +S+L+YG
Sbjct: 445 EGELSQKESEYSELEEEWKAEKASLSGTQHIKAQLEQAKLNMEQARRQGDLGQMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPDLEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQQLHTRVIGQHEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEKGDKE 606
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + G+
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGE-- 736
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+K VM+ V FRPEFINRID+++VF L ++I SIA IQL L +L + L +
Sbjct: 737 -MKELVMSVVSQNFRPEFINRIDELVVFHPLGERHIASIARIQLQRLYQRLEERGFTLHV 795
Query: 667 SKAALKKISNIGFDLIYGAR 686
S AAL+ + G+D +YGAR
Sbjct: 796 SDAALQLLGENGYDPVYGAR 815
>gi|406039852|ref|ZP_11047207.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter ursingii DSM
16037 = CIP 107286]
Length = 859
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/674 (59%), Positives = 540/674 (80%), Gaps = 8/674 (1%)
Query: 15 ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEP 74
++S E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEP
Sbjct: 146 VMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEP 205
Query: 75 GVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISN 134
GVGKTAIVEGLAQRI+NGEVP SL +K++L LD+ LLAG KYRGEFE+RLK +L +++
Sbjct: 206 GVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAK 265
Query: 135 NQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAA 194
++I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA
Sbjct: 266 QDGNVILFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAA 325
Query: 195 FERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPD 254
ERRFQK+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+AA+++S+RYI+DR +PD
Sbjct: 326 LERRFQKVLVDEPSVEDTIAILRGLKEKYAAHHGVQILDSAIIAAAKMSHRYITDRQLPD 385
Query: 255 KAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEI 314
KAIDLIDEAA++IK+EIDSKPE +D+LERR+IQLK++ EA+KR+ D SK + ++++I
Sbjct: 386 KAIDLIDEAASRIKMEIDSKPEALDRLERRIIQLKMQLEAVKRDEDAGSKAEINHLEEQI 445
Query: 315 NKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNK 374
+ +E +Y ++E+IWK EKTL++ ++ + E+++ R+ +KA R+ D ++L+YG + +
Sbjct: 446 SIIEKEYNDMEEIWKAEKTLVEGDKKAQIELDQARIAFDKAQREGDLAEAARLQYGVIPE 505
Query: 375 LERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNI 434
L++ L+ Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLL++
Sbjct: 506 LQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQGEREKLLHM 560
Query: 435 ENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACI 494
E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +
Sbjct: 561 EEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFL 620
Query: 495 FNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKA 554
F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA
Sbjct: 621 FDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKA 680
Query: 555 NSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAV 612
+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G D E ++ V
Sbjct: 681 HPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRAVV 739
Query: 613 MNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALK 672
M+ V +FRPEFINRID+++VF L + I IA+IQL+ L+++L + L + A
Sbjct: 740 MSAVSQHFRPEFINRIDELVVFHSLKKSQIRGIADIQLDRLRSRLADREIGLTVDDTAFD 799
Query: 673 KISNIGFDLIYGAR 686
+ + GFD +YGAR
Sbjct: 800 LLIDAGFDPVYGAR 813
>gi|415765950|ref|ZP_11482887.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|348653689|gb|EGY69376.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-3]
Length = 680
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/644 (60%), Positives = 524/644 (81%), Gaps = 6/644 (0%)
Query: 43 LDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKK 102
+DPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRI+NGEVP L +K+
Sbjct: 1 MDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKR 60
Query: 103 ILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAG 162
+L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDE+HTM+G GK +G++DAG
Sbjct: 61 VLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAG 120
Query: 163 NMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKK 222
N+LKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++
Sbjct: 121 NLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKER 180
Query: 223 YEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLE 282
YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+
Sbjct: 181 YEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLD 240
Query: 283 RRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIK 342
RR+IQLK+E +A+++E D++S+KRL +++KE+ + E +YA LE++WK EK + +Q IK
Sbjct: 241 RRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIK 300
Query: 343 EEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTK 402
E+E R ++ +A R D +S+L+YG++ LE+ L + + + +LL+ +
Sbjct: 301 AELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAE------GKEMSLLRYR 354
Query: 403 VGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSG 462
V EEIAE++SR TGIPV+K+++ E+EKLL +E L KRV+GQ+EA+ AV+NAIRRSR+G
Sbjct: 355 VTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEFLHKRVIGQNEAVDAVANAIRRSRAG 414
Query: 463 LSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAP 522
LSD RP GSF+FLGPTGVGKTELCK L++ +F++E++++RIDMSEF+EKHS+SRL+GAP
Sbjct: 415 LSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAP 474
Query: 523 PGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFR 582
PGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FR
Sbjct: 475 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFR 534
Query: 583 NTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNI 642
NT+++MTSNLGSD I+E + + +K VM V YFRPEFINRID+ ++F LN++NI
Sbjct: 535 NTVVIMTSNLGSDLIQEHAQEGYDTVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENI 594
Query: 643 LSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
IA+IQL L ++ L + A L IS+IG+D I+GAR
Sbjct: 595 RQIADIQLRRLTRRMETHGYVLNFTDATLDFISDIGYDPIFGAR 638
>gi|377555554|ref|ZP_09785282.1| ATPase [endosymbiont of Bathymodiolus sp.]
Length = 852
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/692 (58%), Positives = 545/692 (78%), Gaps = 15/692 (2%)
Query: 1 MGIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIR 54
+G+ SL+ G+ + Q E + L KYT+DLT++A+ GKLDPVIGRD EIR
Sbjct: 129 LGVDKKSLSTAIDKLRGGETVNEQNTETNRDALNKYTLDLTQRAQDGKLDPVIGRDGEIR 188
Query: 55 RAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAG 114
RAIQVLQRR+KNNPVLIGEPGVGKTAI EGLAQRIIN EVP + K++L LD+A L+AG
Sbjct: 189 RAIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINNEVPEGVKGKRLLSLDMAALVAG 248
Query: 115 TKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGEL 174
KYRGEFE+RLK +LKE+ Q +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+L
Sbjct: 249 AKYRGEFEERLKAVLKELEAEQGQVILFIDELHTMVGAGKADGAMDAGNMLKPALARGDL 308
Query: 175 HCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDP 234
HC+GATTLNEYR+YIEKDAA ERRFQK+LV+EP ++TI+ILRGL++KYEVHHGVEITDP
Sbjct: 309 HCMGATTLNEYREYIEKDAALERRFQKVLVDEPSEQDTIAILRGLKEKYEVHHGVEITDP 368
Query: 235 AIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEA 294
AI+AA S RYI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKLER+LIQLKIE A
Sbjct: 369 AIIAAVTYSQRYITDRQLPDKAIDLIDEAASQIRMEIDSKPESMDKLERKLIQLKIERMA 428
Query: 295 IKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINK 354
+K+E D++SK+R ++ I KLE +YA+ E+IWK EK++++ +Q +KEE+E+ + +
Sbjct: 429 LKKEKDKASKERFKELEAHIKKLEKEYADFEEIWKREKSVVQGAQHLKEELEQAKSDLEL 488
Query: 355 ATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSR 414
A R ++ +S+L+YG++ +LE + E D Q + TLL+ KV EIA IV+R
Sbjct: 489 AHRDNNLAKMSELQYGKIPELETKIAEAEAADTQ------EMTLLRNKVTEAEIAHIVAR 542
Query: 415 TTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFM 474
TGIPV K+++ E++KLL +E+++ KR+VGQD+A++ +S+A+RRSR+GLSD RP GSFM
Sbjct: 543 WTGIPVDKMMEGEKDKLLQMESIIHKRLVGQDKAVTVISDAVRRSRAGLSDPNRPDGSFM 602
Query: 475 FLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYL 534
F+GPTGVGKTEL K L+ +F+ E++I+RIDMSEF+EKHS++RLIGAPPGY+GYE+GG L
Sbjct: 603 FMGPTGVGKTELTKALADFLFDTEQAIVRIDMSEFMEKHSVARLIGAPPGYVGYEQGGVL 662
Query: 535 TEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS 594
TE VRRKPYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS
Sbjct: 663 TEAVRRKPYSIILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGS 722
Query: 595 DKIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILK 654
I+E D ++ E +FRPEF+NRID+I+VF L + I SIA +Q+ IL+
Sbjct: 723 YLIQENPGKDMSAELTQIVAE---HFRPEFVNRIDEIVVFNNLEKSQIKSIAALQVEILQ 779
Query: 655 NKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
++L K++++L++ A+ I + G+D ++GAR
Sbjct: 780 SRLAKIDLELELDDNAMTLIVDRGYDPVFGAR 811
>gi|383188698|ref|YP_005198826.1| ATP-dependent chaperone ClpB [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371586956|gb|AEX50686.1| ATP-dependent chaperone ClpB [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 857
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/717 (57%), Positives = 556/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVDDQNAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASVKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+N+ E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 ETELNQKEREYSELEEEWKAEKASLTGTQNIKAELEQAKITLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + LL+ +V EIA++++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEELHNRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +FN++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFNSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQQHFGEASYAQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V FRPEFINRID+++VF L +I +IA IQL L +L + ++ A
Sbjct: 739 ESVMEVVTHSFRPEFINRIDEVVVFHPLGHAHIKNIAKIQLERLYKRLEEHGYTATLTDA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + N GFD +YGAR + K+++ + ++P A I G LI P ++D
Sbjct: 799 ALELLGNTGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGKPITVD 847
>gi|397171671|ref|ZP_10495070.1| ATP-dependent protease [Alishewanella aestuarii B11]
gi|396086679|gb|EJI84290.1| ATP-dependent protease [Alishewanella aestuarii B11]
Length = 859
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/662 (61%), Positives = 539/662 (81%), Gaps = 9/662 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L KYTIDLT +A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LSKYTIDLTARAESGKLDPVIGRDEEIRRCVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+N EVP L K++L LD+ LLAG KYRGEFE+RLK +L E++ + II+FIDE+
Sbjct: 221 QRIVNKEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERLKAVLNEVAKEEGQIILFIDEI 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE +D+LERR+IQLK+E A+ +E D++SKKR I+++I++LE +Y L++
Sbjct: 401 IRMQMDSKPEELDRLERRIIQLKLEDNALAKETDDASKKRRDSIREQIDELEQRYNELDE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+W+ EK ++ +Q IK ++E+ RL + A R SD Q +S+L+YG + +LE+ L SQ +
Sbjct: 461 VWESEKAALQGTQYIKADLEQARLDLEVARRASDLQRMSELQYGRIPELEKKLDLASQAE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+Q + TLL+ KV +EIA++VS+ TGIPVSK+++ ER+KLL +E L +VVGQ
Sbjct: 521 MQ------EMTLLRHKVTDQEIADVVSKATGIPVSKMLEGERDKLLRMEEALHDKVVGQH 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+SAV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTEL K L+ +F++ ++++RIDM
Sbjct: 575 EAVSAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELTKALAQFLFDSPDAMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKIYFRPEF 624
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E E E +K +M+ + FRPEF
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQEHYREYSYAE-MKTMLMDVLSRQFRPEF 753
Query: 625 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 684
+NR+D+ +VF L+ + I IA+IQL L+ +L + + L++S AAL+K++ +GFD +YG
Sbjct: 754 LNRLDESVVFHPLDDRQIKQIASIQLQRLRQRLQQRDFQLEVSDAALEKLAEVGFDTLYG 813
Query: 685 AR 686
AR
Sbjct: 814 AR 815
>gi|90417179|ref|ZP_01225106.1| ClpB protein [gamma proteobacterium HTCC2207]
gi|90330955|gb|EAS46216.1| ClpB protein [marine gamma proteobacterium HTCC2207]
Length = 855
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/681 (60%), Positives = 552/681 (81%), Gaps = 10/681 (1%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
+V G +S D E L KYTIDLTE+A GKLDPVIGRDDEIRR IQVLQRR+KNN
Sbjct: 141 SVRGGEQVSDADAESQREALDKYTIDLTERAESGKLDPVIGRDDEIRRTIQVLQRRTKNN 200
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ LLAG K+RG+FE+RLK
Sbjct: 201 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLTLDLGALLAGAKFRGDFEERLKA 260
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+LK++S + II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+
Sbjct: 261 VLKDLSKQEGQIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRK 320
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
+IEKDAA ERRFQK+LVEEP E+T++ILRGL+++YEVHHGVEITD AIVAA++LS RYI
Sbjct: 321 FIEKDAALERRFQKVLVEEPSEEDTVAILRGLKERYEVHHGVEITDSAIVAAAKLSQRYI 380
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDE+ ++I++EIDSKPE MD+LERRLIQLKIE EA+K++ DE+S+KR
Sbjct: 381 TDRQLPDKAIDLIDESGSRIRMEIDSKPEEMDRLERRLIQLKIEREAVKKDKDEASRKRQ 440
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++ +I +L +YA+LE+IWK EK ++ S IK E+E+ ++ + A R + + ++++
Sbjct: 441 QKLEDDIAELGGEYADLEEIWKAEKASMQGSTHIKAELEQAKVNLEAAHRSGNLEKMAQI 500
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+Y + +LE+ L + ++Q+ LL+ +V EE+AE+V++ TGIPVSK+++ E
Sbjct: 501 QYSIIPELEKQLA-SANSEVQIEKR-----LLRNRVTEEEVAEVVAKWTGIPVSKMLEGE 554
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R+KLL +E+ L +RV+GQ EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTELC
Sbjct: 555 RDKLLRMEDSLHRRVMGQSEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELC 614
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K+L+ +F++EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++L
Sbjct: 615 KSLAEFLFDSEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLL 674
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK-- 605
LDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGSD I +M G++
Sbjct: 675 LDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSDVI-QMLAGEENY 733
Query: 606 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 665
+++K AVM+ V +FRPEFINR+D+++VF L + + IA+IQL++L+ +L + + L
Sbjct: 734 DVMKSAVMDVVSGHFRPEFINRVDEVVVFHPLTKDQLRGIASIQLDLLRKRLAEHELQLS 793
Query: 666 ISKAALKKISNIGFDLIYGAR 686
+S+ L K+ GFD +YGAR
Sbjct: 794 LSEEVLDKLLEAGFDPVYGAR 814
>gi|317493980|ref|ZP_07952397.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918307|gb|EFV39649.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 857
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVDDANAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAANLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG
Sbjct: 445 NEELEHKEREYSELEEEWKAEKASLSGTQNIKAEIEQAKISLEQARRVGDLAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ ER K
Sbjct: 505 KLPDLEKQLEAATQSE------GKTMKLLRNKVTDVEIAEVLARWTGIPVSRMLESERAK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDDLHERVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGQLDYGEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRID+ +VF L++KNI +IA IQL L +L + + I+ A
Sbjct: 739 ELVMSVVSHHFRPEFINRIDETVVFHPLDQKNIKAIARIQLERLYQRLEEKGYSVTITDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+++S GFD +YGAR
Sbjct: 799 ALEQLSKAGFDPVYGAR 815
>gi|322831464|ref|YP_004211491.1| ATP-dependent chaperone ClpB [Rahnella sp. Y9602]
gi|321166665|gb|ADW72364.1| ATP-dependent chaperone ClpB [Rahnella sp. Y9602]
Length = 857
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/717 (57%), Positives = 556/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVDDQNAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQ+IE
Sbjct: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYRQFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASVKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+++ E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 ETELSQKEREYSELEEEWKAEKASLTGTQNIKAELEQAKITLEQARRVGDLGRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q D LL+ +V EIA++++R TGIPV+++++ EREK
Sbjct: 505 KIPELEKQLAAATQAD------GKTMKLLRNRVTDVEIADVLARWTGIPVARMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEELHNRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +FN++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFNSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQQHFGEASYAQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+VM V FRPEFINRID+++VF L +I +IA IQL L +L + ++ A
Sbjct: 739 ASVMEVVTHSFRPEFINRIDEVVVFHPLGHAHIKNIAKIQLARLYKRLEEHGYTATLTDA 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + N GFD +YGAR + K+++ + ++P A I G LI P ++D
Sbjct: 799 ALELLGNTGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGKPITVD 847
>gi|375109099|ref|ZP_09755353.1| ATP-dependent protease [Alishewanella jeotgali KCTC 22429]
gi|374571285|gb|EHR42414.1| ATP-dependent protease [Alishewanella jeotgali KCTC 22429]
Length = 859
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/662 (61%), Positives = 538/662 (81%), Gaps = 9/662 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L KYTIDLT +A GKLDPVIGRD+EIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LSKYTIDLTARAESGKLDPVIGRDEEIRRCVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+N EVP L K++L LD+ LLAG KYRGEFE+RLK +L E++ + II+FIDE+
Sbjct: 221 QRIVNKEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERLKAVLNEVAKEEGQIILFIDEI 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQK+LVEE
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEYRKYIEKDAALERRFQKVLVEE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PTVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE +D+LERR+IQLK+E A+ +E DE+SKKR I+++I++LE +Y L++
Sbjct: 401 IRMQMDSKPEELDRLERRIIQLKLEDNALAKETDEASKKRRDSIREQIDELEQRYNELDE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+W+ EK ++ +Q IK ++E+ RL + A R SD Q +S+L+YG + +LE+ L SQ +
Sbjct: 461 VWESEKAALQGTQYIKADLEQARLDLEVARRASDLQRMSELQYGRIPELEKKLDLASQAE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+Q + TLL+ KV +EIA++VS+ TGIPVSK+++ ER+KLL +E L +VVGQ
Sbjct: 521 MQ------EMTLLRHKVTDQEIADVVSKATGIPVSKMLEGERDKLLRMEEALHDKVVGQH 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+SAV+NAIRRSR+GLSD +P GSF+FLGPTGVGKTEL K L+ +F++ ++++RIDM
Sbjct: 575 EAVSAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELTKALAQFLFDSPDAMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKIYFRPEF 624
DDGRLTD +GRT++F+N +I+MTSNLGSD I+E E E +K +M+ + FRPEF
Sbjct: 695 DDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQEHYREYSYAE-MKTMLMDVLSRQFRPEF 753
Query: 625 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 684
+NR+D+ +VF L+ + I IA IQL L+ +L + + L++S AAL+K++ +GFD +YG
Sbjct: 754 LNRLDESVVFHPLDDRQIKQIAGIQLQRLRQRLQQRDFLLEVSDAALEKLAEVGFDPLYG 813
Query: 685 AR 686
AR
Sbjct: 814 AR 815
>gi|420747927|ref|ZP_15224009.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-64]
gi|391614450|gb|EIS56315.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-64]
Length = 857
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/717 (57%), Positives = 558/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+IT PAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITAPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L + + LL+ +V E+AE+++R TGIPVS++++ ER+K
Sbjct: 505 TIPELEKQLAAATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRID+++VF L R ++ SIANIQL L +L + ++KI++
Sbjct: 739 TVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQP 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ ++I ++P A I G LI P +LD
Sbjct: 799 ALEFLGEAGFDPVYGARPL---KRAIQ---QEI--ENPLAQQILSGKLIPGIPVTLD 847
>gi|406037410|ref|ZP_11044774.1| clpB [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 859
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/668 (60%), Positives = 539/668 (80%), Gaps = 8/668 (1%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEPGVGKTA
Sbjct: 152 EDQRDSLSKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 211
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
IVEGLAQRI+NGEVP SL +K++L LD+ LLAG KYRGEFE+RLK +LK+++ ++ +II
Sbjct: 212 IVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEII 271
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 272 LFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQ 331
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+LV+EP +E+TI+ILRGL++KY HHGV+I D AI+ A+++S+RYI+DR +PDKAIDLI
Sbjct: 332 KVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIGAAKMSHRYITDRQLPDKAIDLI 391
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D SK + ++++I + + +
Sbjct: 392 DEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVNHLEQQIAEKQKE 451
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y +LE+IWK EKTL++ ++ + E+++ R+ + KA R+ D ++L+YG + +L++ L+
Sbjct: 452 YNDLEEIWKAEKTLVEGDKKAQIELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLE 511
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
Q ++ N K L++TKV EIAE+VS TGIPV+K++Q EREKLL +E L K
Sbjct: 512 ---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVTKMLQGEREKLLQMEEFLHK 566
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +F+++++
Sbjct: 567 RVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDA 626
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
+IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA+ DVFN
Sbjct: 627 MIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFN 686
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAVMNEVKI 618
ILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ +G D E I+ VMN V
Sbjct: 687 ILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDE-IRAVVMNAVSQ 745
Query: 619 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 678
+FRPEFINRID++++F L + I +IA+IQL L+++L + ++ L + A + G
Sbjct: 746 HFRPEFINRIDEVVIFHPLQKDQIRAIADIQLERLRSRLNERDIGLTVDDTAFDLLIEAG 805
Query: 679 FDLIYGAR 686
FD +YGAR
Sbjct: 806 FDPVYGAR 813
>gi|365834579|ref|ZP_09376024.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
gi|364568968|gb|EHM46597.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
Length = 857
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 542/677 (80%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E+ LKKYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVDDANAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAANLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK EIE+ ++ + +A R D +S+++YG
Sbjct: 445 NEELEHKEREYSELEEEWKAEKASLSGTQNIKAEIEQAKISLEQARRVGDLAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L LE+ L+ +Q + LL+ KV EIAE+++R TGIPVS++++ ER K
Sbjct: 505 KLPGLEKQLEAATQSE------GKTMKLLRNKVTDVEIAEVLARWTGIPVSRMLESERAK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L +RV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEDDLHERVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++ + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGQLDYGEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM+ V +FRPEFINRID+ +VF L++KNI +IA IQL L +L + + I+ A
Sbjct: 739 ELVMSVVSHHFRPEFINRIDETVVFHPLDQKNIKAIARIQLERLYQRLEEKGYSVTITDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL+++S GFD +YGAR
Sbjct: 799 ALEQLSKAGFDPVYGAR 815
>gi|406914738|gb|EKD53889.1| hypothetical protein ACD_60C00143G0031 [uncultured bacterium]
Length = 862
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/679 (61%), Positives = 547/679 (80%), Gaps = 13/679 (1%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
G+ + E+ L+KYTIDLT +A GKLDPVIGRD EIRR IQVL RR+KNNPVLI
Sbjct: 146 GQTVQDPNAEDQRRALEKYTIDLTARAEQGKLDPVIGRDAEIRRTIQVLLRRTKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRI+N EVP L K++L LD+ L+AG K+RGEFE+RLK +L +
Sbjct: 206 GEPGVGKTAIVEGLAQRIVNREVPEGLQDKRLLALDLGALIAGAKFRGEFEERLKAVLND 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
++ + II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEK
Sbjct: 266 LAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQ+ILV+EP + +TI+ILRGL+++YE+HHGVEITD A+VAA+ LS+RYISDR
Sbjct: 326 DAALERRFQRILVDEPSVPDTIAILRGLKERYELHHGVEITDSALVAAATLSHRYISDRQ 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I++EIDSKPE +D L+RR+IQLKIE EA+K+E DE+SKKRL ++
Sbjct: 386 LPDKAIDLIDEAASNIRMEIDSKPEELDTLDRRVIQLKIEREALKKETDEASKKRLEKLE 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
KE+ KLE + LE IWK EK+ ++ +Q IK ++E+ RL+ A R D +++L+YG
Sbjct: 446 KELKKLESESDKLENIWKNEKSTLQGAQTIKSDLERARLEFETARRAGDLTRMAELQYGL 505
Query: 372 LNKLERILKEKS---QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
+ +LE+ L E S +K+ Q LL++KV EEIAE+VS+ T IPVSK+++ E+
Sbjct: 506 IPELEKKLTEASLAEKKETQ---------LLRSKVTEEEIAEVVSKWTHIPVSKMLESEK 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
EKLL++E+ L KR++GQ +A++AV NAIRRSR+GLSD KRP GSF+FLGPTGVGKTELCK
Sbjct: 557 EKLLHMEDALHKRIIGQSQAVNAVCNAIRRSRAGLSDPKRPIGSFLFLGPTGVGKTELCK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+A +F+ EE++IRIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE+VRRKPYS+ILL
Sbjct: 617 ALAAFLFDTEEAVIRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKPYSVILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEI 607
DE+EKA+ DVFNILLQ+LDDGRLTD+ GRT++FRNTIIVMTSNLGS+ I+++ K GD
Sbjct: 677 DEMEKAHHDVFNILLQVLDDGRLTDSHGRTVDFRNTIIVMTSNLGSELIQDISKHGDYFE 736
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
+K AV+ V +FRPEF+NRID+ +VF L+R+ I SIA IQ + L+ +L + + L ++
Sbjct: 737 MKEAVLKVVGQHFRPEFLNRIDETVVFHPLDREQIKSIAEIQFDRLRARLAEKDYSLSMT 796
Query: 668 KAALKKISNIGFDLIYGAR 686
AL +++IG+D +YGAR
Sbjct: 797 HEALDYLASIGYDPVYGAR 815
>gi|238760706|ref|ZP_04621827.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
gi|238701079|gb|EEP93675.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
Length = 857
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/718 (57%), Positives = 555/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + LL+ +V EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++
Sbjct: 738 KEMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQ 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 798 PALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVTLD 847
>gi|254785223|ref|YP_003072651.1| ATP-dependent chaperone ClpB [Teredinibacter turnerae T7901]
gi|237683583|gb|ACR10847.1| ATP-dependent chaperone ClpB [Teredinibacter turnerae T7901]
Length = 879
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/682 (59%), Positives = 539/682 (79%), Gaps = 28/682 (4%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+KYTIDLT +A GKLDPVIGRDDEIRR +QVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTARAEAGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI++GEVP L ++++L LD+ LLAG K+RGEFE+RLK +L E+ + +++FIDEL
Sbjct: 221 QRIVDGEVPEGLKNRRLLSLDLGALLAGAKFRGEFEERLKSVLNELGKQEGRVVLFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK++V+E
Sbjct: 281 HTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVVVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P+ E+TI+ILRGL+++YE+HHGV I+D AI+AA++LS RYI+DR +PDKAIDLIDEA ++
Sbjct: 341 PNEEDTIAILRGLKERYELHHGVNISDSAIIAAAKLSQRYITDRQLPDKAIDLIDEAGSR 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDSKPE MD+LERRLIQLKIE EA+K++ D +++KRL LI+ +I++ E YA+L++
Sbjct: 401 IRMEIDSKPEQMDRLERRLIQLKIEREAVKKDDDTAARKRLDLIESQIDEAERAYADLDE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IW+ EK ++ SQQIK +E+ RL + A R D +S+L+YG + +LE+ L SQ +
Sbjct: 461 IWRAEKVSLQGSQQIKSNLEQARLDLEAARRAGDLGRMSELQYGIIPELEKQLDMASQAE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ ++ LL+ KV EEIAE+VS+ TGIPVSK+++ EREKLL +E +L +RV+GQ
Sbjct: 521 M------HEMKLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEEVLHERVIGQS 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++++RIDM
Sbjct: 575 EAVIAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDSQDAMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL+LLDE+EKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLVLLDEVEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--------------------- 605
+DGRLTD +GRT++FRNT++VMTSNLGS I+++ +
Sbjct: 695 EDGRLTDGQGRTVDFRNTVVVMTSNLGSAAIQDIAQNRAYDSINFDESSSQDDSMQNEHK 754
Query: 606 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
+K AVM V +FRPEFINRID+++VF L + I IA+IQL IL+ +L + + L
Sbjct: 755 YAAMKDAVMEVVAGHFRPEFINRIDEVVVFHPLGKPQIRGIADIQLGILRKRLHERELKL 814
Query: 665 KISKAALKKISNIGFDLIYGAR 686
+S + KI+ GFD +YGAR
Sbjct: 815 DMSNEVMDKIAEAGFDPVYGAR 836
>gi|389720734|ref|ZP_10187553.1| chaperone ATPase [Acinetobacter sp. HA]
gi|388609418|gb|EIM38590.1| chaperone ATPase [Acinetobacter sp. HA]
Length = 859
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/673 (58%), Positives = 537/673 (79%), Gaps = 6/673 (0%)
Query: 15 ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEP 74
++S E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEP
Sbjct: 146 VMSNNHEDQRDSLNKYTIDLTERALQGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEP 205
Query: 75 GVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISN 134
GVGKTAIVEGLAQRI+NGEVP L K++L LD+ LLAG KYRGEFE+RLK +LK+++
Sbjct: 206 GVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAK 265
Query: 135 NQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAA 194
++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA
Sbjct: 266 HEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAA 325
Query: 195 FERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPD 254
ERRFQK+LV+EP +E+TI+ILRGL+ +Y HHGV+I D AI+AA+++S+RYI+DR +PD
Sbjct: 326 LERRFQKVLVDEPSVEDTIAILRGLKDRYATHHGVQILDSAIIAAAKMSHRYITDRQLPD 385
Query: 255 KAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEI 314
KAIDLIDEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D +K + ++ +I
Sbjct: 386 KAIDLIDEAASRIKMELDSKPEALDKLERRLIQLKMQLEAVKKDEDSGAKSEVKYLEDQI 445
Query: 315 NKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNK 374
+E +Y+ LE+IW+ +K L+ ++ I+ ++++ R+ + KA R+ D ++ +YG + +
Sbjct: 446 ATVEKEYSELEEIWRADKALVAGNKDIQVKLDQARIALEKAQREGDLAEAARYQYGVIPE 505
Query: 375 LERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNI 434
L++ L+ I+ + LL+ KV EIAE+VS TGIPV+K++Q ER+KLL++
Sbjct: 506 LQKQLER-----IEAAEESEAPKLLRDKVTDNEIAEVVSAATGIPVAKMLQGERDKLLHM 560
Query: 435 ENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACI 494
E L KRVVGQ+EA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +
Sbjct: 561 EEFLHKRVVGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFL 620
Query: 495 FNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKA 554
F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA
Sbjct: 621 FDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVLLFDEVEKA 680
Query: 555 NSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIKLAVM 613
+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS ++E+ G ++ ++ VM
Sbjct: 681 HPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSSDVRELGGGATRDEVRSVVM 740
Query: 614 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 673
N V +FRPEFINRID+I+VF L + I IA+IQLN L+ +L + ++ L + +A +
Sbjct: 741 NAVSEHFRPEFINRIDEIVVFHSLEKAQIRGIADIQLNRLRQRLAERDLRLSVEDSAFDQ 800
Query: 674 ISNIGFDLIYGAR 686
+ ++GFD +YGAR
Sbjct: 801 LIDVGFDPLYGAR 813
>gi|284007736|emb|CBA73548.1| protein disaggregation chaperone [Arsenophonus nasoniae]
Length = 863
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/678 (61%), Positives = 545/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ Q EE LKKYTIDLTE+A KLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 151 GGENVNDQSAEEQRQALKKYTIDLTERAEQSKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 210
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 211 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKAVLN 270
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 271 DLAKQEGNVILFIDELHTMVGAGKTEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 330
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYISDR
Sbjct: 331 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAASLSNRYISDR 390
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E DE+SKKRL ++
Sbjct: 391 MLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDEASKKRLKML 450
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +Y+ LE+ WK EK + +Q IK E+E R+ + +A R D +S+L+YG
Sbjct: 451 EEELTEKEREYSELEEEWKAEKAELTGTQHIKAELENARISLEQARRSGDLAKMSELQYG 510
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ ++ + + LL+ KV EIAEI++R TGIPVS++++ EREK
Sbjct: 511 KIPELEKQLEAATKAE------SKTMKLLRNKVTDAEIAEILARWTGIPVSRMLESEREK 564
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L KRV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 565 LLHMEQDLHKRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 624
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE +RR+PYS+ILLDE
Sbjct: 625 ANFLFDSDDAMVRIDMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAIRRRPYSVILLDE 684
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G E +
Sbjct: 685 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLGYNE-M 743
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V FRPEFINRID+++VF LN++ I IA IQL+ L ++ + +KI
Sbjct: 744 KEIVMEVVSRSFRPEFINRIDEVVVFHPLNKEQITDIAQIQLSRLYKRMEEQGYKVKIKP 803
Query: 669 AALKKISNIGFDLIYGAR 686
AAL+K+S GFD ++GAR
Sbjct: 804 AALEKLSEAGFDPVFGAR 821
>gi|238756475|ref|ZP_04617782.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
gi|238705324|gb|EEP97734.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
Length = 857
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/720 (57%), Positives = 556/720 (77%), Gaps = 17/720 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDTVDDAGAEDQRQALKKYTIDLTERAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKISLEQARRVGDLGKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L +Q + N LL+ +V EIA++++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATQAE------GNTMKLLRNRVTETEIADVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHKRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+++VF L R + SIA IQL L +L + ++ I++
Sbjct: 738 KNMVMEIVGHHFRPEFINRIDEVVVFHPLGRAQLASIAKIQLARLYKRLEERGYEVTITE 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTL 728
AL+ + GFD +YGAR + K+++ + ++P A I G L+ P +LD +
Sbjct: 798 PALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLLPGIPVTLDVV 849
>gi|238752926|ref|ZP_04614388.1| Chaperone protein clpB 1 [Yersinia rohdei ATCC 43380]
gi|238708834|gb|EEQ01090.1| Chaperone protein clpB 1 [Yersinia rohdei ATCC 43380]
Length = 857
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/718 (57%), Positives = 556/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + Q LL+ +V E+AE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATALEGQ------TMKLLRNRVTEVEVAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEEDLHKRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 AMFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYAE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+++VF L R ++ SIANIQL L +L + + I++
Sbjct: 738 KDMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYQVTITQ 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ + ++P A I G LI P +LD
Sbjct: 798 PALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVTLD 847
>gi|119505584|ref|ZP_01627655.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2080]
gi|119458527|gb|EAW39631.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2080]
Length = 859
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/708 (58%), Positives = 561/708 (79%), Gaps = 17/708 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S + E L+KYT+DLTE A++GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDGVNSPEAEASRQSLEKYTVDLTELAKVGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI+EGLAQR+INGEVP L +K+IL LD+ LLAG K+RG+FE+RLK +L
Sbjct: 205 IGEPGVGKTAIIEGLAQRVINGEVPEGLKNKRILSLDLGALLAGAKFRGDFEERLKSVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQ++E
Sbjct: 265 ELSKEEGRIILFVDELHTMVGAGKSEGSMDAGNMLKPALARGELHCVGATTLNEYRQFVE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHHGV +TD AI+AA++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVAVTDSAIIAAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+ ++ E+++K++ L+
Sbjct: 385 QLPDKAIDLIDEAASRIRMEIDSKPESMDRLERRLIQLKIEREAVNKDQTEAAQKQVALL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++ +L+ + ++L++I EK ++ + +IK IE+ +L + A R D +S+++YG
Sbjct: 445 DVQVAELDQELSDLDEILTAEKAAVQGAAKIKAAIEQAKLDLEMAQRAGDLTRMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
EL +L++ L Q + Q P LL+ +V EE+AE+VSR TGIP+SK+++ +REK
Sbjct: 505 ELPELDKQLGIAEQVE-QGPTQ-----LLRNRVTEEEVAEVVSRWTGIPISKMLEGDREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E++L +RVVGQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMESVLHERVVGQDEAVIAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
++ +F+++++++R+DMSEF+EKHS++RLIGAPPGY+GYE GGYLTE VRR+PYSL+LLDE
Sbjct: 619 ASFVFDSDQAMVRLDMSEFMEKHSVARLIGAPPGYVGYEAGGYLTEAVRRRPYSLLLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA+ DVFNILLQ+L+DGRLTD +GRT++F+NT+IVMTSNLGSD I+EM GD+ + +
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFKNTVIVMTSNLGSDLIQEM-AGDERYDAM 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K AVM V +FRPEFINR+D+ +VF L + I IANIQ+ L+++L + ++ L++S
Sbjct: 738 KAAVMGVVGRHFRPEFINRVDETVVFHPLAEEQIRGIANIQVESLRHRLAERDLALQLSD 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGD 716
L ++ GFD ++GAR + K+++ LL ++P A I GD
Sbjct: 798 EVLDHLAEAGFDPVFGARPL---KRAIQQLL-----ENPLAQQILQGD 837
>gi|238790743|ref|ZP_04634504.1| Chaperone protein clpB 1 [Yersinia frederiksenii ATCC 33641]
gi|238721184|gb|EEQ12863.1| Chaperone protein clpB 1 [Yersinia frederiksenii ATCC 33641]
Length = 857
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/718 (57%), Positives = 557/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 ETELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + LL+ +V EIAE+++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHKRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM+ V +FRPEFINRID+++VF L R ++ SIA IQL L +L + + I++
Sbjct: 738 KNMVMDVVTHHFRPEFINRIDEVVVFHPLGRAHLASIARIQLERLYKRLEERGYQVTITQ 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ + ++P + I G LI P +LD
Sbjct: 798 PALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLSQQILSGKLIPGVPVTLD 847
>gi|262376331|ref|ZP_06069561.1| ATP-dependent chaperone ClpB [Acinetobacter lwoffii SH145]
gi|262308932|gb|EEY90065.1| ATP-dependent chaperone ClpB [Acinetobacter lwoffii SH145]
gi|407008463|gb|EKE23828.1| hypothetical protein ACD_6C00314G0001 [uncultured bacterium]
Length = 859
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/676 (58%), Positives = 534/676 (78%), Gaps = 12/676 (1%)
Query: 15 ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEP 74
++S E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEP
Sbjct: 146 VMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEP 205
Query: 75 GVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISN 134
GVGKTAIVEGLAQRIINGEVP L K++L LD+ LLAG KYRGEFE+RLK +LK+I+
Sbjct: 206 GVGKTAIVEGLAQRIINGEVPEGLKGKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDIAK 265
Query: 135 NQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAA 194
++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA
Sbjct: 266 HEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAA 325
Query: 195 FERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPD 254
ERRFQK+LV+EP +E+TI+ILRGL+ +Y HHGV+I D AI+AA+++S+RYI+DR +PD
Sbjct: 326 LERRFQKVLVDEPSVEDTIAILRGLKDRYATHHGVQILDSAIIAAAKMSHRYITDRQLPD 385
Query: 255 KAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEI 314
KAIDLIDEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D +K + + +I
Sbjct: 386 KAIDLIDEAASRIKMELDSKPEALDKLERRLIQLKMQLEAVKKDEDSGAKAEIQYLSDQI 445
Query: 315 NKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNK 374
+E +Y +LE++W+ +K L++ ++ ++ ++++ R + KA R+ D ++L+YG + +
Sbjct: 446 ATVEKEYHDLEEVWRADKALVEGNKDVQIKLDQARTALEKAQREGDLGEAARLQYGVIPE 505
Query: 375 LERILKEKSQKDIQLPNNANKFT---LLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
L QK ++L A++ LL+ KV EIAE+VS TGIPV+K++Q ER+KL
Sbjct: 506 L--------QKQLELAEKADESATPKLLRNKVTDNEIAEVVSAATGIPVAKMLQGERDKL 557
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L++E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+
Sbjct: 558 LHMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALA 617
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+IL DE+
Sbjct: 618 NFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEV 677
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKL 610
EKA+ DVFNILLQ+LDDGRLTD++GR ++F+N++IVMTSNLGS ++E+ KE ++
Sbjct: 678 EKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNSVIVMTSNLGSQDVRELGGNATKEEVRT 737
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VMN V +FRPEFINRID+++VF L + I IA+IQL+ L+ +L + +M L + +A
Sbjct: 738 VVMNAVSEHFRPEFINRIDELVVFHALEKDQIRGIADIQLDRLRQRLAERDMRLSVDDSA 797
Query: 671 LKKISNIGFDLIYGAR 686
++ GFD +YGAR
Sbjct: 798 FDQLIEAGFDPLYGAR 813
>gi|238798951|ref|ZP_04642414.1| Chaperone protein clpB 1 [Yersinia mollaretii ATCC 43969]
gi|238717180|gb|EEQ09033.1| Chaperone protein clpB 1 [Yersinia mollaretii ATCC 43969]
Length = 857
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/718 (57%), Positives = 557/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + LL+ +V EIA++++R TGIPVS++++ ER+K
Sbjct: 505 KIPELEKQLAAATALE------GKTMKLLRNRVTEVEIADVLARWTGIPVSRMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++
Sbjct: 738 KNMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQ 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
+AL+ + GFD +YGAR + K+++ + ++P + I G LI P +LD
Sbjct: 798 SALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLSQQILSGKLIPGVPVTLD 847
>gi|146329388|ref|YP_001209038.1| ATP-dependent protease ClpB [Dichelobacter nodosus VCS1703A]
gi|146232858|gb|ABQ13836.1| ATP-dependent protease ClpB [Dichelobacter nodosus VCS1703A]
Length = 857
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/718 (57%), Positives = 567/718 (78%), Gaps = 16/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + E+ G LKKYT+D+T++A GK+DPVIGRD+EIRRA+Q+LQRRSKNNPVL
Sbjct: 146 GGEAVTDEYAEDKRGALKKYTLDVTQRALDGKIDPVIGRDEEIRRAMQILQRRSKNNPVL 205
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI + VP SL K++L LD+A LLAGTKYRGEFE+RLK +L
Sbjct: 206 IGEPGVGKTAIVEGLAQRIADRAVPESLKGKRLLSLDLAALLAGTKYRGEFEERLKAVLD 265
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ II+FIDE+HTM+G GK EGS+DAGNMLKP L+RG+LHCIGATTL+EYRQY+E
Sbjct: 266 EITKADGQIILFIDEIHTMVGAGKSEGSLDAGNMLKPALARGDLHCIGATTLDEYRQYME 325
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP +E+TI+ILRGLQ++YEVHHG+ ITDPA+VAA++LS+RYIS R
Sbjct: 326 KDAALERRFQKVIVDEPSVEDTIAILRGLQERYEVHHGINITDPALVAAAQLSHRYISGR 385
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAAA+I++E+DSKPE+MDK++RRLIQL+IE A+++E D +SK+RL +
Sbjct: 386 KLPDKAIDLMDEAAAQIRMELDSKPEVMDKIDRRLIQLQIERMALEKETDAASKRRLSDL 445
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI E +YA+LE+IW EK + + +IKE+++K+R+++ A R+ D+ S+++YG
Sbjct: 446 EAEIAAQEKEYADLEEIWLAEKAGTQGAAEIKEQLDKLRVELEAAKRRGDFARASEIQYG 505
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ E+ L E Q+ Q P+ L++ KV +EEIAEIVSR TGIPV+K+++ E+E+
Sbjct: 506 LIPAKEKQLLENEQQTEQRPHR-----LMRNKVTAEEIAEIVSRWTGIPVAKMMEGEKER 560
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E +L +RVVGQ A+ AV+NAIRR+R+GLSD KRP GSF+FLGPTGVGKTELC+TL
Sbjct: 561 LLHLETVLNERVVGQKTAVEAVANAIRRNRAGLSDPKRPIGSFLFLGPTGVGKTELCRTL 620
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE+++RIDMSEF+EKHS++RLIGAPPGY+GY++GGYLTE VRRKPYS++L DE
Sbjct: 621 AQFLFDSEENMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRKPYSVVLFDE 680
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+SDVFN LLQ+LD+GRLTD +GRT++FR+T+I+MTSNLGSD I+ + + E +K
Sbjct: 681 VEKAHSDVFNTLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSDMIQLLAEKSYEEMKS 740
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEFINRID+ IVF L + ++ IA IQL L+ +L + L + + A
Sbjct: 741 AVMEIVMAHFRPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLSVEEDA 800
Query: 671 LKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTL 728
+ ++ +G+D ++GAR + K+++ + H ++P A + G + PQS T+
Sbjct: 801 INQLVELGYDPLFGARPL---KRAI-----QNHIENPLAQALLAGQYL---PQSTITI 847
>gi|8575704|gb|AAF78058.1|AF263561_3 ClpB protease [secondary endosymbiont of Glycaspis brimblecombei]
Length = 857
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/678 (60%), Positives = 545/678 (80%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G N+ Q EE LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDNVNDQGAEEQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKDVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGSVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAASLSNRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+ QLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVTQLKLEQQALKKESDDASKKRLKML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++E+ + E +Y+ LE+ WK EK + +Q IK E+E R+ + +A R D +S+L+YG
Sbjct: 445 EEELTEKEREYSELEEEWKAEKAELTGTQHIKAELENARISMEQARRSGDLAKMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L+ ++ + ++ LL+ KV EIAEI++R TGIPVSK+++ EREK
Sbjct: 505 KIPELEKQLEAATKAE------SHSMKLLRNKVTDAEIAEILARWTGIPVSKMLESEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L KRV+GQ+EA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLHMEQDLHKRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE +RR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAIRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G E+
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLGYDEMK 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
+L VM V FRPEFINRID+++VF L+++ I IA IQL+ L ++ + +KI+
Sbjct: 739 EL-VMEVVSRSFRPEFINRIDEVVVFHPLDKEQITEIAQIQLSRLYKRMEEQGYKVKITP 797
Query: 669 AALKKISNIGFDLIYGAR 686
AAL+K+ GFD ++GAR
Sbjct: 798 AALEKLGEAGFDPVFGAR 815
>gi|375335749|ref|ZP_09777093.1| ATP-dependent chaperone protein ClpB [Succinivibrionaceae bacterium
WG-1]
Length = 862
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/662 (61%), Positives = 527/662 (79%), Gaps = 8/662 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVLIGEPGVGKTAI EGLA
Sbjct: 161 LEKYTVDLTARAEKGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAICEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+ GEVP L +K++L LD+ L+AG KYRGEFE+RLK +L ++ + +I+FIDEL
Sbjct: 221 QRIVKGEVPEGLKNKRVLALDMGALIAGAKYRGEFEERLKAVLNALAKEEGRVILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYR+YIEKDAA ERRFQK+ V E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGDLHCMGATTLDEYRKYIEKDAALERRFQKVFVGE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E TI+ILRGL+++YE+HH V ITDPAIVAA+ LS RYI+DR +PDKAIDLIDEAAA
Sbjct: 341 PSVENTIAILRGLKERYELHHHVTITDPAIVAAATLSNRYITDRQLPDKAIDLIDEAAAS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE +DKLER+LIQLK+E EAI +E DE+SKKRL LI +I E +Y NLE+
Sbjct: 401 IRLQMDSKPEALDKLERKLIQLKMEREAIAKENDEASKKRLALIDIDIFDKEKEYKNLEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+WK EK + +Q IKEE+EK R + A+R D T+SK++YG + +L+ L+ +
Sbjct: 461 LWKNEKAGLLGTQHIKEELEKARHDFDVASRSGDLATMSKIQYGVIPQLQGQLESAEKNK 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ LL+ KV EIAE+VSR TGIPVSK+++ ER KLLN+EN L RV+GQD
Sbjct: 521 VD-----ESKVLLRNKVTENEIAEVVSRATGIPVSKMLEGERAKLLNMENSLHSRVIGQD 575
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ A++N+IRRSR+GLSD RP GSF+F+GPTGVGKTELCK+L+ +F+ ++++RIDM
Sbjct: 576 EAVVAIANSIRRSRAGLSDPNRPIGSFLFMGPTGVGKTELCKSLAEFLFDTTDAMVRIDM 635
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EK S+SRL+GAPPGY+GY+EGGYLTE VRR+PYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 636 SEFMEKFSVSRLVGAPPGYVGYDEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVL 695
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI--IKLAVMNEVKIYFRPEF 624
DDGRLTD +GRT++F+NT+I+MTSN+GSD I+E E G K IK ++ E+ F+PEF
Sbjct: 696 DDGRLTDGQGRTVDFKNTVIIMTSNIGSDLIQE-ETGKKSYNEIKSDLLQELSTRFKPEF 754
Query: 625 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 684
+NRID+ +VF L++++I +IA IQL+ L +L N +++I L +I+ +GFD +YG
Sbjct: 755 LNRIDETVVFHPLSQEHIRNIAKIQLDTLTKRLSANNFNVEIKDHMLSRIAELGFDPVYG 814
Query: 685 AR 686
AR
Sbjct: 815 AR 816
>gi|190150414|ref|YP_001968939.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|189915545|gb|ACE61797.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
Length = 781
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/624 (62%), Positives = 525/624 (84%), Gaps = 4/624 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ +Q EE L+KYTIDLTE+A+ GKLDPVIGRD+EIRRA+QVLQRR+KNNPVL
Sbjct: 143 GGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 263 ELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 323 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++RL +
Sbjct: 383 QLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE++WK EK+ + +Q IK E+E R+++++A R+++++ +S+L+YG
Sbjct: 443 DEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSELQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L E +++ + N LL+TKV EEIAE++S+ TGIPVSK+++ E+EK
Sbjct: 503 KIPALEKQLAEAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMMEGEKEK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E +L RV+GQ+EA+ AV+NAIRRSR+GLSD RP GSF+FLGPTGVGKTELCKTL
Sbjct: 559 LLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 619 ANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS I+E + D +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDYAGMKE 738
Query: 611 AVMNEVKIYFRPEFINRIDDIIVF 634
VM+ V +FRPEFINRID+ +VF
Sbjct: 739 VVMSVVGQHFRPEFINRIDETVVF 762
>gi|85058562|ref|YP_454264.1| protein disaggregation chaperone [Sodalis glossinidius str.
'morsitans']
gi|84779082|dbj|BAE73859.1| heat shock protein [Sodalis glossinidius str. 'morsitans']
Length = 864
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/677 (58%), Positives = 538/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 152 GGEQVNDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 211
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L + ++L LD+ L+AG+KYRGEFE+RLK +L
Sbjct: 212 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNNRVLSLDMGSLVAGSKYRGEFEERLKGVLS 271
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR++IE
Sbjct: 272 DLSKKEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKFIE 331
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP++E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 332 KDAALERRFQKVFVAEPNVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 391
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 392 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDDASLKRLAML 451
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E Y+ LE+ WK EK + +Q +K E+E+ ++ I +A R D +S+L+YG
Sbjct: 452 NDELAQKERDYSELEEEWKAEKASLSGTQHLKAELEQAKISIEQARRVGDLARMSELQYG 511
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L SQ + LL+ +V EIAE+++R TGIPVS++++ ER K
Sbjct: 512 KIPELEKQLAVASQAE------GKSMRLLRNRVTDIEIAEVLARWTGIPVSRMLESERAK 565
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L +RV+GQ+EA+ AVSNAIRRSR+GL+D RP GSFMFLGPTGVGKTELCK L
Sbjct: 566 LLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFMFLGPTGVGKTELCKAL 625
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+F+++++++ IDMSEF+EKHS+S+L+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 626 GTFLFDSDDAMVCIDMSEFMEKHSVSQLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 685
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E + + + +K
Sbjct: 686 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDVIQERFGQMNYQEMK 745
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V++ V+ +FRPEFINR+D+++VF L+R++I IA IQL + +L + IS
Sbjct: 746 DMVLDVVRHHFRPEFINRVDEVVVFHPLSREHITEIAQIQLQRMYQRLEERGYTTTISDE 805
Query: 670 ALKKISNIGFDLIYGAR 686
AL + GFD +YGAR
Sbjct: 806 ALALLGKSGFDPVYGAR 822
>gi|238785830|ref|ZP_04629799.1| Chaperone protein clpB 1 [Yersinia bercovieri ATCC 43970]
gi|238713243|gb|EEQ05286.1| Chaperone protein clpB 1 [Yersinia bercovieri ATCC 43970]
Length = 857
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/718 (57%), Positives = 556/718 (77%), Gaps = 17/718 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + Q E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 QLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 445 NTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + + LL+ +V EIA++++R TGIPV+++++ ER+K
Sbjct: 505 KIPELEKQLAAATALE------GKTMKLLRNRVTEVEIADVLARWTGIPVARMLESERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEII 608
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYAE-M 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++
Sbjct: 738 KNMVMEVVSHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQ 797
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ + GFD +YGAR + K+++ + ++P + I G LI P +LD
Sbjct: 798 PALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLSQQILSGKLIPGVPVTLD 847
>gi|323143510|ref|ZP_08078190.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
12066]
gi|322416704|gb|EFY07358.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
12066]
Length = 864
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/717 (57%), Positives = 554/717 (77%), Gaps = 16/717 (2%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
G+N+ + E G LKKYTIDLTE+A GKLDPVIGRD+EIRR +Q+LQRR+KNNPVLI
Sbjct: 146 GQNVNDENAESTRGALKKYTIDLTERAEKGKLDPVIGRDEEIRRTMQILQRRTKNNPVLI 205
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRII GEVP L +KK+L LD+ L+AG KYRGEFE+RLK +L E
Sbjct: 206 GEPGVGKTAIVEGLAQRIIKGEVPEGLRNKKVLSLDMGALIAGAKYRGEFEERLKGVLNE 265
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
++ + +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYRQYIEK
Sbjct: 266 LAKLEGKVILFIDEIHTMVGAGKSEGSMDAGNMLKPALARGELHCIGATTLDEYRQYIEK 325
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+ V EP +E TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYI+DR
Sbjct: 326 DAALERRFQKVFVGEPSVENTIAILRGLKERYEIHHHVQITDPAIVAAATLSNRYITDRQ 385
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAAA I+++IDSKPE +D+L+R++IQLK+E +A+ +E D++SKKRL I
Sbjct: 386 LPDKAIDLIDEAAASIRLQIDSKPEPLDRLDRKIIQLKMERQAVAKETDDASKKRLQAID 445
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
+EI++ + +Y+ L++IWK EK ++ +QQIK +++ R + + A R+ D +S+L+YG
Sbjct: 446 EEIDESQKEYSRLDEIWKKEKLSLEGTQQIKVKLDAARHEFDVAKRQGDLSRMSELQYGI 505
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ LE+ +KE + F LLK KV EIAE+VS+ TGIPV+K+++ ER KL
Sbjct: 506 IPSLEKQIKEAGDAPAE-----KSFQLLKNKVTDVEIAEVVSKATGIPVAKMLEGERAKL 560
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L++E+ L +RV+GQDEAI+A++N+IRRSR+GLSD RP GSFMF+GPTGVGKTELCK ++
Sbjct: 561 LHMEDNLHQRVIGQDEAINAIANSIRRSRAGLSDPNRPIGSFMFMGPTGVGKTELCKAVA 620
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+ E++++RIDMSEF+EK S+SRL+GAPPGY+GYE+GGYLTE VRR+PYS+ILLDEI
Sbjct: 621 EFLFDTEKAMVRIDMSEFMEKFSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSVILLDEI 680
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EIIK 609
EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+ I+E E G K + IK
Sbjct: 681 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEMIQE-ETGKKSYQEIK 739
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
++ ++ +F+PEF+NR+D+ +VF L+ I IA IQL L +L ++ + A
Sbjct: 740 AQLLQILEKHFKPEFLNRVDETVVFHPLSHNEIKKIAKIQLEGLTKRLSAQGYEVILPDA 799
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSL-------SILLKKIHKKSP-EANFIFLGDLI 718
+ ++NIGFD ++GAR + ++ IL K+ P E NF G+L+
Sbjct: 800 LMDHVANIGFDPVFGARPLRRAIQNTIEDPLANMILSGKVKVGEPFELNFDASGELV 856
>gi|339477952|ref|YP_004706772.1| ATP-dependent chaperone protein ClpB [Candidatus Moranella endobia
PCIT]
gi|338172503|gb|AEI74904.1| ATP-dependent chaperone protein ClpB [Candidatus Moranella endobia
PCIT]
Length = 857
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/719 (57%), Positives = 551/719 (76%), Gaps = 15/719 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E LK +TIDLTE A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEPVKDQDAENQRQALKNFTIDLTEHAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRI+NGEVP L + ++L LD+ L+AG KYRGEFE RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIVNGEVPEGLKNNRVLSLDMGSLVAGAKYRGEFEARLKSVLH 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + +II+FIDELHTM+G GK +G++DA NMLKP L+RGELHC+GATTLNEYR++IE
Sbjct: 265 DLSKQEGNIILFIDELHTMVGAGKADGAMDASNMLKPMLARGELHCVGATTLNEYRKFIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ + EP +E TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVFIAEPGVEATIAILRGLKERYELHHHVQITDPAIVAAANLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D++S KRL ++
Sbjct: 385 QLPDKAIDLIDEAASSIRIQIDSKPEELDRLERRIIQLKLEQQALKKEMDDASVKRLTML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ K E Y+ LE+ WK EK + +Q +K E+E+ ++ I +A R D +S+L+YG
Sbjct: 445 NNELTKKERDYSELEEEWKAEKASLSGTQNLKAELEQTKISIEQARRVGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+L +LE+ L+ SQ + + LL+ +V EIAE+++R TGIPVS++++ ER K
Sbjct: 505 KLPELEKQLEAASQAE------SKGLRLLRNRVTDIEIAEVLARWTGIPVSRMLESERAK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
L+ +E L K V+GQ EA++AVSNAIRRSR+GL+D RP GSFMFLGPTGVGKTELCK L
Sbjct: 559 LVRMEQHLQKIVIGQHEAVAAVSNAIRRSRAGLADPNRPIGSFMFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE+VRR+PYS++LLDE
Sbjct: 619 ATFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTELVRRRPYSVMLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS+ I+E ++ + IK
Sbjct: 679 IEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSEIIQERFDQINYLEIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
V+ V FRPEFINR+D+++VF LNR +I+ IA IQL L +L + IS
Sbjct: 739 DVVLEVVSHNFRPEFINRVDEVVVFHPLNRNHIIEIAQIQLRRLYQRLEERGYTANISDE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTL 728
AL + GFD +YGAR + K+++ ++I ++P A I G L+ P L+ L
Sbjct: 799 ALVLLGKSGFDPVYGARPM---KRAIQ---QEI--ENPLAQQILSGQLLPGKPVKLEVL 849
>gi|430376469|ref|ZP_19430872.1| ATPase [Moraxella macacae 0408225]
gi|429541700|gb|ELA09728.1| ATPase [Moraxella macacae 0408225]
Length = 860
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/678 (58%), Positives = 542/678 (79%), Gaps = 6/678 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ L KYT+DLTE+A GKLDPVIGRD+EIRR IQVL RR+KNNPVL
Sbjct: 142 GGEKVQHQNSEDQRDALNKYTVDLTERAESGKLDPVIGRDEEIRRTIQVLSRRTKNNPVL 201
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQ+I+NG+VP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 202 IGEPGVGKTAIVEGLAQKIVNGDVPEGLRNKRVLALDLGALIAGAKYRGEFEERLKAVLN 261
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ ++ I++FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQ+IE
Sbjct: 262 DLAKSEGQIVLFIDEIHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQFIE 321
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E++I+ILRGL+++YE+HHGV+I D AI+AA+ +S+RYI+DR
Sbjct: 322 KDAALERRFQKVLVDEPTVEDSIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDR 381
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+++K+E+DSKPE + KL+ RLI LK++ EA+K E D+ + + L+
Sbjct: 382 KLPDKAIDLIDEAASRLKMELDSKPEALGKLDSRLIGLKMQREALKNETDDGAIAQRNLL 441
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+I LE +YA+L IW+ EK L+K SQ +K+E++K R+ KA+R++D++T+SKL+Y
Sbjct: 442 HDQIADLEKQYADLNDIWQAEKALVKGSQVLKDELDKARIAYEKASRENDYETMSKLQYE 501
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L ++ D+ + ++ LL+ KV EIAE+VS +TGIPV+K++Q EREK
Sbjct: 502 TIPDLEKRL---AKSDLAQRSGSDT-KLLRNKVTDNEIAEVVSASTGIPVAKMMQGEREK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
+L +E+ L +RVVGQ EA++AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K+L
Sbjct: 558 MLAMEDKLHERVVGQTEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKSL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E ++IRIDMSEF+EKHS+SRL+GAPPGYIGYEEGG LTE VRRKPYS++L DE
Sbjct: 618 ANFLFDDENAMIRIDMSEFMEKHSVSRLVGAPPGYIGYEEGGVLTEAVRRKPYSVVLFDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA+ DVFNILLQ+LDDGR+TD++GR ++F+NT+I+MTSNLGS KI+EM + + I
Sbjct: 678 VEKAHPDVFNILLQVLDDGRMTDSQGRVVDFKNTVIIMTSNLGSHKIQEMTNDGENYDNI 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+I+VF L + ++ IA IQL LK +L + M L+++
Sbjct: 738 KSTVMESVNTHFRPEFINRIDEIVVFHPLGQADMTGIAKIQLARLKQRLKEREMGLELTD 797
Query: 669 AALKKISNIGFDLIYGAR 686
A+ + +G+D I+GAR
Sbjct: 798 NAMNTLIAVGYDPIFGAR 815
>gi|253990664|ref|YP_003042020.1| chaperone clpb [Photorhabdus asymbiotica]
gi|253782114|emb|CAQ85278.1| chaperone clpb [Photorhabdus asymbiotica]
Length = 857
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/717 (57%), Positives = 559/717 (77%), Gaps = 15/717 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVYDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKGVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
++S + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLERQALKKESDDASKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+E+ E +Y+ LE+ WK EK + +Q IK E+E R+ + +A R D +S+++YG
Sbjct: 445 NEELIVKEREYSELEEEWKAEKAELTGTQHIKAELENARISLEQARRSGDLAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L +Q + LL+ KV EIAEI++R TGIPV+++++ E++K
Sbjct: 505 KIPGLEKQLATATQAE------GKNMKLLRNKVTDTEIAEILARWTGIPVARMLESEKDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ+EA+ AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLRMEQELHKRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 619 ANFLFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E G + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDMIQERFGGLNYGEMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINRID+++VF L R+++ +IA+IQL L +L + + I++
Sbjct: 739 DMVMGIVSHHFRPEFINRIDEVVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVAITQQ 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
AL+ ++ GFD +YGAR + K+++ + ++P A I G L+ P +LD
Sbjct: 799 ALEMLAEAGFDPVYGARPL---KRAIQQEI-----ENPLAQKILSGQLLPGKPVTLD 847
>gi|297183638|gb|ADI19764.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
Length = 863
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/709 (57%), Positives = 560/709 (78%), Gaps = 17/709 (2%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + S + EE L+KYT+DLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 143 GGDGVNSAEAEETRQALEKYTLDLTERAAAGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI+EGLAQR++NGEVP+SL K+IL LD+A LLAG K+RG+FE+RLK +L
Sbjct: 203 IGEPGVGKTAIIEGLAQRVVNGEVPDSLRDKRILALDLAALLAGAKFRGDFEERLKAVLN 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+S + II+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYRQ +E
Sbjct: 263 ALSKEEGRIILFVDELHTMVGAGKAEGSLDAGNMLKPALARGELHCVGATTLNEYRQSVE 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP E+TI+ILRGL+++YEVHH V+ITD AI+AA++LS RYI+DR
Sbjct: 323 KDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHSVDITDSAIIAAAKLSQRYITDR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K++ ++ L +
Sbjct: 383 QLPDKAIDLIDEAASRIRMEIDSKPESMDRLERRLIQLKIEREAVKKDETAAAGSELEQL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+I+ +E +YA+LE+IW EK +++ + QI+ IE+ +L ++ A R D +S++++G
Sbjct: 443 THQIDSIEREYADLEEIWLAEKAVVQGAAQIRSLIEQTKLDLDVARRAGDLTAMSEIQHG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
L +LER L S +++ P TLL+++V EE+AE+VSR TGIP++K+++ +REK
Sbjct: 503 VLPELERQL--ISAANVEAPEP----TLLRSRVTDEEVAEVVSRWTGIPIAKMLEGDREK 556
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RVVGQ+EA++AVSNA+RR+R+GL+D +RP GSF+FLGPTGVGKTELCK L
Sbjct: 557 LLRMETTLHDRVVGQNEAVTAVSNAVRRARAGLADPQRPNGSFLFLGPTGVGKTELCKAL 616
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++RIDMSEF+E+HS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+LLDE
Sbjct: 617 ATYLFDSDQALVRIDMSEFMEQHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLLLLDE 676
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GDKEII 608
+EKA+ VF++LLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGS+ I + G E I
Sbjct: 677 VEKAHPKVFDVLLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSELIHDAGTRLGYDE-I 735
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
+ AVM V +FRPEF+NRID+ +VF L +++I IA IQL +L ++L + ++ L +S
Sbjct: 736 QAAVMARVSEHFRPEFLNRIDESVVFHSLEQEHIRDIATIQLEVLTDRLAERSLRLAVSD 795
Query: 669 AALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDL 717
++ +S +GFD +YGAR + K+++ L+ ++P A+ + GD
Sbjct: 796 DVMEHLSEVGFDPVYGARPL---KRAIQQLI-----ENPLAHALLAGDF 836
>gi|304309993|ref|YP_003809591.1| Heat shock protein F84.1 [gamma proteobacterium HdN1]
gi|301795726|emb|CBL43925.1| Heat shock protein F84.1 [gamma proteobacterium HdN1]
Length = 857
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/710 (58%), Positives = 559/710 (78%), Gaps = 10/710 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G + E+ L+KYTIDLTE+AR GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 145 GGSTVDDPNAEDQRQALQKYTIDLTERARKGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAI EGLAQRI+NGEVP L +K++L LD+ LLAG K+RGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIAEGLAQRIVNGEVPEGLKNKRVLSLDMGSLLAGAKFRGEFEERLKSVLT 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E++ + +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 ELAKEEGAVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV++P +E+TI+ILRGL+++YEVHHGV+ITD AIV A++LS RYI+DR
Sbjct: 325 KDAALERRFQKVLVDQPSVEDTIAILRGLKERYEVHHGVDITDSAIVEAAKLSQRYITDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++E+DSKPE +D+L+RRLIQ K+E EA+K+E DE+S+KRL +
Sbjct: 385 QLPDKAIDLIDEAASRIRMEMDSKPEELDRLDRRLIQFKMEREALKKEDDEASRKRLEKL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++I K E +YA+LE+IW EK ++ SQQIK E+E+ R+ ++ A R+ D +S+L+YG
Sbjct: 445 NEDIAKNEREYADLEEIWNAEKAALQGSQQIKVELEQARIDMDGARRRGDLARMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L +Q ++ + LL+ +V EE+AE+VS+ TGIPVSK+++ EREK
Sbjct: 505 RIPELEKRLDMATQAEM------TEMKLLRNRVTEEEVAEVVSKWTGIPVSKMLEGEREK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L KRVVGQ EAI AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L
Sbjct: 559 LLQMEDSLHKRVVGQHEAIVAVANAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTELCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ +++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 AEFLFDTQDALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTETVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GDKEIIK 609
+EKA+ DVFNILLQ+L+DGRLTD +GRT++F+NT++VMTSNLGSD I+ + + D ++
Sbjct: 679 VEKAHPDVFNILLQVLEDGRLTDGQGRTVDFKNTVVVMTSNLGSDMIQTLAREADYNSMR 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
AVM+ V +FRPEFINRID+++VF L I IA IQL L+ +LL ++ L +
Sbjct: 739 DAVMDVVGQHFRPEFINRIDEVVVFHPLADSQIRGIAEIQLANLRKRLLDRDLKLDLDAE 798
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
+ +I +G+D ++GAR + K+++ L++ + A GD+I+
Sbjct: 799 VMNRIIEVGYDPVFGARPL---KRAIQRLIENPLAQDILAGRFMPGDVIH 845
>gi|358013344|ref|ZP_09145154.1| ATP-dependent chaperone ClpB [Acinetobacter sp. P8-3-8]
Length = 859
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/709 (56%), Positives = 550/709 (77%), Gaps = 14/709 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ +++ E+ L KYTIDLTE+A GKLDPVIGRD+EIRR IQVL RR+KNNPVL
Sbjct: 142 GGEQVMANNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDEEIRRTIQVLSRRTKNNPVL 201
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL K++L LD+ LLAG KYRGEFE+RLK +LK
Sbjct: 202 IGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRVLSLDLGSLLAGAKYRGEFEERLKAVLK 261
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQ+IE
Sbjct: 262 DLAKYDGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQFIE 321
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+ KY HHGV+I D AI+AA+++S+RYI+DR
Sbjct: 322 KDAALERRFQKVLVDEPSVEDTIAILRGLKDKYATHHGVQILDSAIIAAAKMSHRYITDR 381
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++IK+EIDSKPE +D+L+RRLIQLK++ EA+K++ D SK + +
Sbjct: 382 QLPDKAIDLIDEAASRIKMEIDSKPEPLDRLDRRLIQLKMQLEAVKKDADSVSKAEVAHL 441
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K+I +++ +Y++LE++W EK L+ + Q + E++K R KA R+ D S+L+YG
Sbjct: 442 EKQIEEVQKEYSDLEEVWIAEKRLVDGTNQAQVELDKARTAFEKAQREGDLAEASRLQYG 501
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +L++ L E+ + L++TKV EIAE+VS TGIPV+K++Q EREK
Sbjct: 502 IIPELQKRLNEEEVA-----ETNEEPKLIRTKVTENEIAEVVSAATGIPVTKMLQGEREK 556
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L
Sbjct: 557 LLHMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKAL 616
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE
Sbjct: 617 ANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDE 676
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI-IK 609
+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS+ ++E+ +G + ++
Sbjct: 677 VEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSNDVRELGEGASDAEVR 736
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
++N V +FRPEFINRID+++VF L + I IA+IQL+ L+++L ++ LK+
Sbjct: 737 ATILNAVSQHFRPEFINRIDELVVFHSLKKSQIRGIADIQLDRLRSRLNDRDIGLKVDDQ 796
Query: 670 ALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 718
A + + GFD +YGAR + K+++ + ++P A I GD I
Sbjct: 797 AFDILIDAGFDPVYGARPL---KRAIQQQI-----ENPLAQKILAGDFI 837
>gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1]
gi|49530427|emb|CAG68139.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1]
Length = 859
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/674 (58%), Positives = 541/674 (80%), Gaps = 8/674 (1%)
Query: 15 ILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEP 74
++S E+ L KYTIDLTE+A GKLDPVIGRDDEIRR IQVL RR+KNNPVLIGEP
Sbjct: 146 VMSNNHEDQRDSLNKYTIDLTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEP 205
Query: 75 GVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISN 134
GVGKTAIVEGLAQRI+NGEVP SL +K++L LD+ LLAG KYRGEFE+RLK +L +++
Sbjct: 206 GVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAK 265
Query: 135 NQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAA 194
+I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQYIEKDAA
Sbjct: 266 QDGQVILFIDELHTLVGAGKSDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAA 325
Query: 195 FERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPD 254
ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+RYI+DR +PD
Sbjct: 326 LERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPD 385
Query: 255 KAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEI 314
KAIDLIDEAA++IK+E+DSKPE +D+LERR+IQLK++ EA+K++ D SK + ++++I
Sbjct: 386 KAIDLIDEAASRIKMELDSKPEALDRLERRIIQLKMQLEAVKKDEDLGSKAEVKHLEEQI 445
Query: 315 NKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNK 374
+ ++ +Y ++E++W+ EK L++ ++ + ++++ R+ KA R+ D ++L+YG + +
Sbjct: 446 SIVQKEYNDMEEVWRAEKALVEGTKDAQVKLDQARIAFEKAQREGDLAEAARLQYGVIPE 505
Query: 375 LERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNI 434
L++ L+ Q ++ N K LL+ KV EIAE+VS TGIPV+K++Q EREKLL +
Sbjct: 506 LQKQLE---QDEVAEENEEPK--LLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLQM 560
Query: 435 ENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACI 494
E+ L RVVGQDEA+ AVSNA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K L+ +
Sbjct: 561 ESFLHNRVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFL 620
Query: 495 FNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKA 554
F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L DE+EKA
Sbjct: 621 FDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKA 680
Query: 555 NSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG--DKEIIKLAV 612
+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G D E ++ V
Sbjct: 681 HPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGATDDE-VRAVV 739
Query: 613 MNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALK 672
M+ V +FRPEFINRID+++VF L + I IA+IQL+ L+++L + ++ L I +A
Sbjct: 740 MSAVSQHFRPEFINRIDELVVFHSLQKSQIRGIADIQLDRLRSRLAERDIGLNIDDSAFD 799
Query: 673 KISNIGFDLIYGAR 686
+ + GFD +YGAR
Sbjct: 800 ILIDAGFDPVYGAR 813
>gi|304413392|ref|ZP_07394865.1| ClpB molecular chaperone [Candidatus Regiella insecticola LSR1]
gi|304284235|gb|EFL92628.1| ClpB molecular chaperone [Candidatus Regiella insecticola LSR1]
Length = 857
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/678 (60%), Positives = 533/678 (78%), Gaps = 8/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
+G I S +E LK++TIDLTE+A GKLDPVIGRD+EIRR +Q+LQRR+KNNPVL
Sbjct: 144 SGNTIKSASEENQRQALKQFTIDLTERAAQGKLDPVIGRDEEIRRTMQMLQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLA RIINGEVP L K++L LDI LLAG K+RGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLALRIINGEVPEGLKGKRVLSLDIGALLAGAKFRGEFEERLKALLN 263
Query: 131 EISNNQKDIIIFIDELHTMI-GTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYI 189
E+ + ++I+FIDELHT++ G GK +G++DAGNMLKP L+RGELHC+GATTLNEYRQYI
Sbjct: 264 ELEKQKGNVILFIDELHTLVVGAGKSDGAMDAGNMLKPALARGELHCVGATTLNEYRQYI 323
Query: 190 EKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISD 249
EKDAA ERRFQ + V EP++E+ I+ILRGL+++YE+HH V+ITDPAIV A LS+RYISD
Sbjct: 324 EKDAALERRFQTVYVAEPNVEDAIAILRGLKERYELHHHVQITDPAIVEAVTLSHRYISD 383
Query: 250 RFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLL 309
R +PDKAIDLIDEA + I+++IDSKPE++D+L RR+IQLK+E +A+ +E D++SKKRL
Sbjct: 384 RRLPDKAIDLIDEAGSSIRMQIDSKPELLDRLYRRIIQLKLEQQALNKESDDASKKRLQE 443
Query: 310 IKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKY 369
+ E+ + E +Y+ LE+ WK EK +K Q+IK E+E+ ++ + +A R D +S+L+Y
Sbjct: 444 LNSELEQKEREYSTLEEKWKAEKAALKGIQKIKTELEQAKITLEQARRVGDLTKMSELQY 503
Query: 370 GELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
G++ +LE+ L +Q L N K LL +V EEIA++V+R TGIPVSK+++ ER
Sbjct: 504 GKIPELEKELDTANQ----LENETMK--LLPNRVTEEEIAKVVARWTGIPVSKMLEGERS 557
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL IE L RV+GQDEAI AVSNAIRRSR+GL+D RP GSF+FLGPTGVGKTELCK
Sbjct: 558 KLLRIEQELHNRVIGQDEAIEAVSNAIRRSRAGLADDNRPTGSFLFLGPTGVGKTELCKA 617
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L+ +FN ++++IRIDMSEF+EKH++SRLIGAPPGY+GYEEGGYLTEIVRR+PYS+IL D
Sbjct: 618 LAVFLFNTDKAMIRIDMSEFMEKHAVSRLIGAPPGYVGYEEGGYLTEIVRRRPYSVILFD 677
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEII 608
E+EKA+ DVFNILLQ+LD+GRLTD +GRT++FRNT+++MTSNLGS+ I E + D I
Sbjct: 678 EVEKAHPDVFNILLQVLDEGRLTDGQGRTVDFRNTVVIMTSNLGSELILEHSTETDFSKI 737
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
K VM V +FRPEFINRID+IIVF L + +++SIA IQL L+ +L N + ++
Sbjct: 738 KNKVMENVSNHFRPEFINRIDEIIVFHRLEQHHLISIAKIQLQRLQQRLAGRNYQINATE 797
Query: 669 AALKKISNIGFDLIYGAR 686
A L+ +S GFD +YGAR
Sbjct: 798 AVLELLSQRGFDPVYGAR 815
>gi|88811113|ref|ZP_01126369.1| ClpB protein [Nitrococcus mobilis Nb-231]
gi|88791652|gb|EAR22763.1| ClpB protein [Nitrococcus mobilis Nb-231]
Length = 866
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/678 (60%), Positives = 550/678 (81%), Gaps = 9/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ I EE L++YTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 146 GGEQIGDPNAEEQRQALERYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 205
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+N EVP +L +++L+LD+ L+AG K+RG+FE+RLK +L+
Sbjct: 206 IGEPGVGKTAIVEGLAQRIVNAEVPGALKGRRLLVLDMGALVAGAKFRGDFEERLKAVLR 265
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + II+FIDE+H ++G G+ EGS+DAGNMLKP L+RGELHCIGATTL+EYRQYIE
Sbjct: 266 DLAKQEGQIILFIDEIHNIVGAGRAEGSMDAGNMLKPALARGELHCIGATTLDEYRQYIE 325
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ VEEP IE+TI+ILRGL+++YEVHHGVEITDPAIVAA+ +S RYI++R
Sbjct: 326 KDAALERRFQKVTVEEPTIEDTIAILRGLKERYEVHHGVEITDPAIVAAATMSQRYITER 385
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I+IEIDSKPE MD+LERRLIQLKIE EA+ +E DE+SKKRL +
Sbjct: 386 KLPDKAIDLIDEAASRIRIEIDSKPEAMDRLERRLIQLKIEREALAKEADEASKKRLQTV 445
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++EI ++E +Y +LE+IW EK ++ + IKE +E+ R ++ A R D +S+L+YG
Sbjct: 446 EREIEEVERQYQDLEQIWDSEKAAVEGTHAIKESLEQARKELETARRAGDLTRMSELQYG 505
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LER L+ S+ ++Q LL+ KV EE+AE+VS+ TGIPVSK+++ ERE+
Sbjct: 506 RIPELERRLEVASEAEMQ------DMQLLRNKVTEEEVAEVVSKWTGIPVSKMLEGERER 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L RV+GQ+EA++AV+NAIRRSR+GL+D KRP GSF+FLGPTGVGKTELCK L
Sbjct: 560 LLHMEQALQGRVIGQEEAVAAVANAIRRSRAGLADPKRPNGSFLFLGPTGVGKTELCKAL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ EE+++RIDMSEF+EKH+++RLIGAPPGY+GYE+GGYLTE +RR+PY++ILLDE
Sbjct: 620 ATFLFDTEEAMVRIDMSEFMEKHAVARLIGAPPGYVGYEQGGYLTEAIRRRPYAVILLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK--EII 608
+EKA++DVFN+LLQ+LDDGRLTD+ GRT +FRN +IVMTSNLGS I+EM G++ + +
Sbjct: 680 VEKAHADVFNVLLQVLDDGRLTDSHGRTADFRNAVIVMTSNLGSQVIQEM-AGEENYQAM 738
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
+ AVM V FRPEFINRIDD++VF L+R+ I IA IQ+ + +L + +M +++++
Sbjct: 739 RQAVMEIVSQQFRPEFINRIDDVVVFHSLDREQIQRIAEIQIAYVDRRLREQDMGIELTQ 798
Query: 669 AALKKISNIGFDLIYGAR 686
AL+ ++ GFD +YGAR
Sbjct: 799 EALEMLAQAGFDPVYGAR 816
>gi|238791396|ref|ZP_04635035.1| Chaperone protein clpB 1 [Yersinia intermedia ATCC 29909]
gi|238729529|gb|EEQ21044.1| Chaperone protein clpB 1 [Yersinia intermedia ATCC 29909]
Length = 857
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/708 (58%), Positives = 551/708 (77%), Gaps = 17/708 (2%)
Query: 21 EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTA 80
E+ LKK+TIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTA
Sbjct: 155 EDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 81 IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 140
IVEGLAQRI+NGEVP L K++L LD+ L+AG KYRGEFE+RLK +L ++S + +I
Sbjct: 215 IVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERLKGVLNDLSKQEGSVI 274
Query: 141 IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 200
+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQ
Sbjct: 275 LFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334
Query: 201 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 260
K+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLI
Sbjct: 335 KVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLI 394
Query: 261 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 320
DEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKRL ++ E+ + E +
Sbjct: 395 DEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLNTELEQKERE 454
Query: 321 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 380
Y+ LE+ WK EK + +Q IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 455 YSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQYGKIPELEKQLA 514
Query: 381 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 440
+ + LL+ +V EIA++++R TGIPVS++++ ER+KLL +E L K
Sbjct: 515 AANALE------GKTMKLLRNRVTEVEIADVLARWTGIPVSRMLESERDKLLRMEQDLHK 568
Query: 441 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 500
RV+GQDEA+ AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F+++++
Sbjct: 569 RVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA 628
Query: 501 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 560
++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFN
Sbjct: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688
Query: 561 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGDKEIIKLAVMNEVKI 618
ILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E E+ E +K VM V
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTE-MKNMVMEVVSH 747
Query: 619 YFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIG 678
+FRPEFINRID+++VF L R ++ SIA+IQL L +L + + I++ AL+ + G
Sbjct: 748 HFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETG 807
Query: 679 FDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 726
FD +YGAR + K+++ + ++P A I G LI P LD
Sbjct: 808 FDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPVILD 847
>gi|289674876|ref|ZP_06495766.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal, partial
[Pseudomonas syringae pv. syringae FF5]
Length = 663
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/629 (63%), Positives = 515/629 (81%), Gaps = 7/629 (1%)
Query: 58 QVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKY 117
QVLQRR+KNNPVLIGEPGVGKTAI EGLAQRIINGEVP+ L K++L LD+ L+AG KY
Sbjct: 1 QVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKY 60
Query: 118 RGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCI 177
RGEFE+RLK +L E+S + II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+
Sbjct: 61 RGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCV 120
Query: 178 GATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIV 237
GATTLNEYRQYIEKDAA ERRFQK+LV+EP E+TI+ILRGL+++YEVHH V ITD AI+
Sbjct: 121 GATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAII 180
Query: 238 AASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKR 297
AA++LS+RYI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+
Sbjct: 181 AAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKK 240
Query: 298 EYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATR 357
E DE++ KRL ++ EI +LE++YA+LE+IW EK + S QI+++IE+ R ++ A R
Sbjct: 241 EKDEAAIKRLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARR 300
Query: 358 KSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTG 417
+ D +++L+YG + LER L+ Q P N LL++KV EEIAE+VS+ TG
Sbjct: 301 RGDLNRMAELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTG 354
Query: 418 IPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLG 477
IPVSK+++ EREKLL +E LL RV+GQ+EA+ AVSNA+RRSR+GLSD RP GSFMFLG
Sbjct: 355 IPVSKMLEGEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLG 414
Query: 478 PTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEI 537
PTGVGKTELCK L+ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE
Sbjct: 415 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEA 474
Query: 538 VRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKI 597
VRRKPYSLILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I
Sbjct: 475 VRRKPYSLILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQI 534
Query: 598 KEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKL 657
+E+ GD+E + AVM+ V +FRPEF+NRID++++F L R I I +IQL L+ +L
Sbjct: 535 QEL-VGDREAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRL 593
Query: 658 LKMNMDLKISKAALKKISNIGFDLIYGAR 686
+ + + +S AL K+ +G+D +YGAR
Sbjct: 594 AERELSMTLSPEALDKLIAVGYDPVYGAR 622
>gi|290476239|ref|YP_003469139.1| ATP-dependent protease [Xenorhabdus bovienii SS-2004]
gi|289175572|emb|CBJ82375.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Xenorhabdus bovienii SS-2004]
Length = 860
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/677 (60%), Positives = 543/677 (80%), Gaps = 4/677 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + Q E+ LKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGEKVSDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIIN EVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINAEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKGVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ + +I+FIDELHT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIE
Sbjct: 265 DLAKQEGSVILFIDELHTVVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR
Sbjct: 325 KDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D+ SKKRL ++
Sbjct: 385 MLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDGSKKRLEML 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK + +Q IK E+E RL++ KA R D +S+++YG
Sbjct: 445 NMELVEKEREYSELEEEWKAEKAELTGTQNIKAELENTRLELEKARRSGDLAKMSEIQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + ++ LL+ KV EIAEI++R TGIPVS++++ E++K
Sbjct: 505 KIPELEKRLATAATAATA---ESHHMKLLRNKVTDAEIAEILARWTGIPVSRMLESEKDK 561
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E+ L KRV+GQ+EA+ AVSNAIRRSR+GLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 562 LLSMEHELHKRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKAL 621
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+++++++R+DMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE
Sbjct: 622 ANFLFDSDDAMVRLDMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 681
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E D +K
Sbjct: 682 IEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQERFGALDYTGMK 741
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINR+D+++VF L ++++ SIANIQL L ++L + + ++
Sbjct: 742 DMVMEVVGHHFRPEFINRVDEVVVFHPLGKEHLTSIANIQLQRLYHRLEERGYQVTMTST 801
Query: 670 ALKKISNIGFDLIYGAR 686
AL+K+S+ GFD +YGAR
Sbjct: 802 ALEKLSDAGFDPVYGAR 818
>gi|269468202|gb|EEZ79895.1| ATP-dependent Clp protease ATP-binding subunit ClpB [uncultured
SUP05 cluster bacterium]
Length = 852
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/713 (57%), Positives = 552/713 (77%), Gaps = 21/713 (2%)
Query: 9 NVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNP 68
+VN +N +Q+D L KYT DLT+ A GKLDPVIGRD EIRRAIQVLQRR+KNNP
Sbjct: 148 SVNDQNAETQRD-----ALNKYTQDLTQLAIDGKLDPVIGRDGEIRRAIQVLQRRTKNNP 202
Query: 69 VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 128
VLIGEPGVGKTAIVEGLAQRIINGEVP + K++L LD+A L+AG KYRGEFE+RLK +
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIINGEVPEGIKGKRVLSLDMAALVAGAKYRGEFEERLKAV 262
Query: 129 LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 188
LK++ Q +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQY
Sbjct: 263 LKDLEAEQGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCMGATTLDEYRQY 322
Query: 189 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 248
IEKD+A ERRFQK+LV+EP E+T++ILRGL++KYEVHHGVEITDPAI+AA S RYI+
Sbjct: 323 IEKDSALERRFQKVLVDEPTEEDTVAILRGLKEKYEVHHGVEITDPAIIAAVTYSTRYIT 382
Query: 249 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 308
DR +PDKAIDLIDEAA++I++EIDSKPE MDKL+R+L+QLKIE A+K+E D++SK+R
Sbjct: 383 DRQLPDKAIDLIDEAASQIRMEIDSKPESMDKLDRKLVQLKIERMALKKEKDKASKERFK 442
Query: 309 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 368
++ I KLE +Y +LE++WK EK++++ +Q +KEE+E+ ++ + A R +D +S+L+
Sbjct: 443 ELENTIKKLEKEYGDLEEVWKKEKSIVQGAQHLKEELEQAKVDLESAHRNNDLAKMSELQ 502
Query: 369 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 428
YG + +LE + + D TLL+ KV +EIA IV+R TGIPV K+++ E+
Sbjct: 503 YGVIPELEEKITQAENVD------GEDMTLLRNKVTEDEIAHIVARWTGIPVDKMMEGEK 556
Query: 429 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 488
+KLL +E ++ KR+VGQD+A+ +S+A+RRSR+GLSD RP GSF+F+GPTGVGKTEL K
Sbjct: 557 DKLLQMEEIIHKRLVGQDKAVKVISDAVRRSRAGLSDPNRPDGSFLFMGPTGVGKTELTK 616
Query: 489 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 548
L+ +F+ E++I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GG LTE +RRKPYS+ILL
Sbjct: 617 ALADFLFDTEQAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGVLTEAIRRKPYSIILL 676
Query: 549 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD--KE 606
DEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS I++ D E
Sbjct: 677 DEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIQDNPGKDIQSE 736
Query: 607 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 666
+IKL V +FRPEF+NRID+I+VF L + I IA +Q++ILK++L +N+ L +
Sbjct: 737 LIKL-----VGEHFRPEFVNRIDEIVVFNGLEKNQIKGIAVLQIDILKSRLEDLNLKLNL 791
Query: 667 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 719
S A+ I + G+D ++GAR + K+++ LL+ + A G IN
Sbjct: 792 SDVAMTLIVDRGYDPVFGARPL---KRTIQQLLENPLSQKILAGEFLPGSTIN 841
>gi|119946869|ref|YP_944549.1| chaperone ClpB [Psychromonas ingrahamii 37]
gi|119865473|gb|ABM04950.1| chaperone ClpB containing ATPase AAA-2 domain [Psychromonas
ingrahamii 37]
Length = 857
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/677 (59%), Positives = 537/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
NG+N+ Q E L KYTIDLTE+A GKLDPVIGRDDE+RR IQVLQRR+KNNPV+
Sbjct: 145 NGQNVTDQDAEGVEKALVKYTIDLTEQAEQGKLDPVIGRDDEVRRMIQVLQRRTKNNPVI 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L +K++L LD+ L+AG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLS 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYR+YIE
Sbjct: 265 ELSKEEGKIILFIDELHTMVGAGKADGAMDAGNMLKPALARGDLHCVGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RYI+DR
Sbjct: 325 KDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHKVEITDPAIVAAATLSHRYIADR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +DKLER++IQLK+E +A++ + DE+S KRL +
Sbjct: 385 QLPDKAIDLIDEAASSIRLQMDSKPEELDKLERKIIQLKLEEKALQNDTDEASIKRLADL 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ + + E + L+K+W+ EK + +Q IK+ IE+ RL + A+R D +S+L+YG
Sbjct: 445 ESALAEKEQAFLALDKVWRAEKAALSGTQNIKQSIEQARLDLEVASRAVDLTRMSELQYG 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L + +Q ++Q + TLLK V EIAEI++ TGIPV+K+++ ER+K
Sbjct: 505 VIPALEKQLVQAAQAEMQ------ETTLLKHAVTENEIAEILAHWTGIPVAKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L RV+GQ+EAI A++NAIRRSR+GLSD RP GSF+FLGPTGVGKTE CK L
Sbjct: 559 LLKMETHLHSRVIGQNEAIDAIANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTESCKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++E++++RIDMSEF+EK S+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDE
Sbjct: 619 ANFLFDSEDNMVRIDMSEFMEKFSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
IEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSN+GSD I+E +K + IK
Sbjct: 679 IEKAHPDVFNILLQVLDDGRLTDGQGRTVSFRNTVIIMTSNIGSDIIQEKFDKVSYDEIK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+++ + F+PEF+NRID+ +VF L R++I SIA IQL L+ +L + + +
Sbjct: 739 SYLLDILASQFKPEFLNRIDETVVFHPLGREHIKSIAEIQLRSLQKRLTDKDYLVTFTDQ 798
Query: 670 ALKKISNIGFDLIYGAR 686
A++ + + G+D +YGAR
Sbjct: 799 AIQLLVDAGYDPVYGAR 815
>gi|399265|sp|P17422.2|CLPB_DICNO RecName: Full=Chaperone protein ClpB
Length = 860
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/676 (59%), Positives = 545/676 (80%), Gaps = 5/676 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + E+ G LKKYT+D+T++ GK+DPVIGRD+EIRRA+Q+LQRRSKNNPVL
Sbjct: 149 GGEAVTDEYAEDKRGALKKYTLDVTQRPLDGKIDPVIGRDEEIRRAMQILQRRSKNNPVL 208
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI + VP SL K++L LD+A LLAGTKYRGEFE+RLK +L
Sbjct: 209 IGEPGVGKTAIVEGLAQRIADRAVPESLKGKRLLSLDLAALLAGTKYRGEFEERLKAVLD 268
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
EI+ II+FIDE+HTM+G GK EGS+DAGNMLKP L+RG+LHCIGATTL+EYRQY+E
Sbjct: 269 EITKADGQIILFIDEIHTMVGAGKSEGSLDAGNMLKPALARGDLHCIGATTLDEYRQYME 328
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++V+EP +E+TI+ILR LQ++YEVHHG+ ITDPA+VAA++LS+RYIS R
Sbjct: 329 KDAALERRFQKVIVDEPSVEDTIAILRNLQERYEVHHGINITDPALVAAAQLSHRYISGR 388
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDL+DEAAA+I++E+DSKPE+MDK++RRLIQL+IE A+++E D +SK+RL +
Sbjct: 389 KLPDKAIDLMDEAAAQIRMELDSKPEVMDKIDRRLIQLQIERMALEKETDAASKRRLSDL 448
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ EI E +YA+LE+IW EK + +IKE+++K+R+++ A R+ D+ S+++YG
Sbjct: 449 EAEIAAQEKEYADLEEIWLAEKAGNAGAAEIKEQLDKLRVELEAAKRRGDFARASEIQYG 508
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ E+ L E Q+ Q P+ L++ KV +EEIAEIVSR TGIPV+K+++ E+E+
Sbjct: 509 LIPAKEKQLLENEQQTEQRPHR-----LMRNKVTAEEIAEIVSRWTGIPVAKMMEGEKER 563
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E +L +RVVGQ A+ AV+NAIRR+R+GLSD KRP GSF+FLGPTGVGKTELC+TL
Sbjct: 564 LLHLETVLNERVVGQKTAVEAVANAIRRNRAGLSDPKRPIGSFLFLGPTGVGKTELCRTL 623
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F++EE+++RIDMSEF+EKHS++RLIGAPPGY+GY++GGYLTE VRRKPYS++L DE
Sbjct: 624 AQFLFDSEENMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRKPYSVVLFDE 683
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
+EKA+SDVFN LLQ+LD+GRLTD +GRT++FR+T+I+MTSNLGSD I+ + + E +K
Sbjct: 684 VEKAHSDVFNTLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSDMIQLLAEKSYEEMKS 743
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
AVM V +FRPEFINRID+ IVF L + ++ IA IQL L+ +L + L + + A
Sbjct: 744 AVMEIVMAHFRPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLSVEEDA 803
Query: 671 LKKISNIGFDLIYGAR 686
+ ++ +G+D ++GAR
Sbjct: 804 INQLVELGYDPLFGAR 819
>gi|388256844|ref|ZP_10134025.1| ClpB [Cellvibrio sp. BR]
gi|387940544|gb|EIK47094.1| ClpB [Cellvibrio sp. BR]
Length = 885
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/700 (59%), Positives = 551/700 (78%), Gaps = 30/700 (4%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + E + L+KYT+DLT +A GKLDPVIGRDDEIRR IQVLQRR+KNNPVL
Sbjct: 146 GGEKVEDADSEGNRQALEKYTVDLTARAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVL 205
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L +K++L LD+ LLAG K+RG+FE+RLK ++
Sbjct: 206 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRLLSLDLGGLLAGAKFRGDFEERLKSVIN 265
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 266 ELSKQEGRVILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIE 325
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+ V+EP+ +TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RYI+DR
Sbjct: 326 KDAALERRFQKVQVDEPNESDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDR 385
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQ KIE EA++++ DE+SKKRL +
Sbjct: 386 QLPDKAIDLIDEAASRIRMEIDSKPEEMDRLERRLIQFKIEREAVRKDEDEASKKRLAKL 445
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++I+K E + +LE+IW+ EK ++ SQ+IK ++E+ RL++ + RK D +S+L+YG
Sbjct: 446 DQDIDKFERELNDLEEIWRAEKAALQGSQEIKSQLEQARLELEEKRRKGDLARMSELQYG 505
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ +LE+ L Q ++ + LL+ KV EEIAE+VS+ TGIPVSK+++ ER+K
Sbjct: 506 IIPQLEKQLDMAGQAEMM------EMKLLRNKVTEEEIAEVVSKWTGIPVSKMLEGERDK 559
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRV+GQ EA+ AV+NA+RRSR+GLSDA RP GSF+FLGPTGVGKTELCK+L
Sbjct: 560 LLRMEEALHKRVIGQHEAVVAVANAVRRSRAGLSDANRPNGSFLFLGPTGVGKTELCKSL 619
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 620 AEFLFDTADAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDE 679
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG------- 603
+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ +
Sbjct: 680 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELAEDRSFDTVS 739
Query: 604 -DKEI----------------IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIA 646
D + +K AVM V +FRPEFINRID+++VF L R+ I IA
Sbjct: 740 FDTSVSEDMNNSLNNENRYNAMKDAVMEVVGSHFRPEFINRIDEVVVFHPLGREQIRGIA 799
Query: 647 NIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
+IQL +L+ +L + + L++ A + K++N+GFD +YGAR
Sbjct: 800 DIQLELLRKRLGERELSLELDDAVMNKLANVGFDPVYGAR 839
>gi|244539339|dbj|BAH83382.1| protein disaggregation chaperone [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 723
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/676 (58%), Positives = 535/676 (79%), Gaps = 9/676 (1%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
G + Q E + YLKKYTIDLTE+A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLI
Sbjct: 14 GSKVQDQSAENNQQYLKKYTIDLTEQAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 73
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRIIN EVP L + ++L LD+A L+AG K+RGEFE+RLK +L +
Sbjct: 74 GEPGVGKTAIVEGLAQRIINNEVPEGLKNNRVLSLDLASLVAGAKFRGEFEERLKNLLND 133
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
+S ++I+F+DELH M+GTGKV+GS+DAGNMLKP L+RGELHCIGATTL+EYR YIEK
Sbjct: 134 LSKQDGNVILFVDELHNMVGTGKVDGSMDAGNMLKPALARGELHCIGATTLDEYRNYIEK 193
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA ERRFQK+++ EP+IE+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR
Sbjct: 194 DAALERRFQKVIIAEPNIEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYITDRQ 253
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIEH+A+++E DE+S KR +++
Sbjct: 254 LPDKAIDLIDEAASNIRLQIDSKPEFLDRLERRIIQLKIEHQALQKESDEASVKRFTMLE 313
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
E+ K E +Y L + W+ EK + +Q IK ++E+ R+ + +A R D +S+L+YG
Sbjct: 314 SELKKKEQEYKKLVQEWQTEKESLDRAQHIKAKLEQARISLEQARRVGDLAKMSELQYGT 373
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ +++ L +Q N LL+ +V EIAE+++++TGIPV+++++ E+ KL
Sbjct: 374 IPTIKKELARATQ--------GNTIKLLRNRVTDVEIAEVLAKSTGIPVARMMEEEKNKL 425
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L +E +L RV+GQ+ A+ A+SNAIRRSR+GL+D KRP GSF+FLGPTGVGKTELCK L+
Sbjct: 426 LRMEQVLHTRVIGQNGAVEAISNAIRRSRTGLADPKRPVGSFLFLGPTGVGKTELCKALA 485
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+N+++++RIDMSEF+EKHS++RLIGAPPGYIGYE+GGYLTE +RR PYS++LLDEI
Sbjct: 486 NFLFDNDDAMVRIDMSEFMEKHSVARLIGAPPGYIGYEKGGYLTEAIRRHPYSVVLLDEI 545
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKL 610
EKA+ DVFNILLQ+LDDGRLTD+ GRTI+FRNT+++MTSN+GS+ I++ K E IK
Sbjct: 546 EKAHFDVFNILLQVLDDGRLTDSHGRTIDFRNTVVIMTSNIGSEVIRDKFNKLHYEEIKK 605
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
+M+ +K +FRPEFINR+D++IVF L+ ++I I IQL L +L K + I
Sbjct: 606 LIMDMLKNFFRPEFINRVDEVIVFHPLSEQHIKDIVKIQLQKLSKRLEKSGYKIHIFDNV 665
Query: 671 LKKISNIGFDLIYGAR 686
++ ++ G+D IYGAR
Sbjct: 666 IEFLAKQGYDPIYGAR 681
>gi|418020213|ref|ZP_12659521.1| ATP-dependent chaperone ClpB [Candidatus Regiella insecticola
R5.15]
gi|347604417|gb|EGY29075.1| ATP-dependent chaperone ClpB [Candidatus Regiella insecticola
R5.15]
Length = 856
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/677 (59%), Positives = 530/677 (78%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
+G I S +E LK++TIDLTE A GKLDPVIGRD EIR +Q+LQRR+KNNPVL
Sbjct: 144 SGNTIKSASEENQRQALKQFTIDLTEHAEQGKLDPVIGRDKEIRHTMQILQRRTKNNPVL 203
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLA RIINGEVP L K++L LDI LLAG K+RGEFE+RLK +L
Sbjct: 204 IGEPGVGKTAIVEGLALRIINGEVPEGLKGKRVLSLDIGALLAGAKFRGEFEERLKALLS 263
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+ + ++I+FIDELHT++G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIE
Sbjct: 264 ELEKQEGNVILFIDELHTLVGAGKSDGAMDAGNMLKPALARGKLHCVGATTLDEYRQYIE 323
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQ + V EP+IE+ ++ILRGL+++YE+HH V+ITDPAIV A LS+RYISDR
Sbjct: 324 KDAALERRFQTVYVAEPNIEDAVAILRGLKERYELHHHVQITDPAIVEAVTLSHRYISDR 383
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEA + I+++IDSKPE +D L RR+IQLK+E +A+ +E D++SKKRL +
Sbjct: 384 RLPDKAIDLIDEAGSSIRMQIDSKPEPLDLLYRRIIQLKLEQQALNKESDDASKKRLQEL 443
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
E+ + E +Y+ LE+ WK EK +K +Q+IK E+E+ ++ + +A R D +S+L+YG
Sbjct: 444 NNELEQKEREYSTLEEEWKAEKAALKGTQKIKTELEQAKITLEQARRVGDLTKMSELQYG 503
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ +LE+ L + QL N K LL +V EEIA++V+R TGIPVSK+++ ER K
Sbjct: 504 KIPELEKELDTAN----QLENKTMK--LLPNRVTEEEIAKVVARWTGIPVSKMLEGERSK 557
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL IE L RV+GQDEAI AVSNAIRRSR+G++D RP GSF+FLGPTGVGKTELCK L
Sbjct: 558 LLRIEQELHNRVIGQDEAIEAVSNAIRRSRAGIADDNRPTGSFLFLGPTGVGKTELCKAL 617
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ ++++IRIDMSEF+EKH++SRLIGAPPGY+GYEEGGYLTEIVRR+PYS+ILLDE
Sbjct: 618 AVFLFDTDKAMIRIDMSEFMEKHTVSRLIGAPPGYVGYEEGGYLTEIVRRRPYSVILLDE 677
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIK 609
+EKA+ DVFNILLQ+LD+GRLTD +G+T++FRNT+I+MTSNLGS+ I+ + D IK
Sbjct: 678 VEKAHPDVFNILLQVLDEGRLTDGQGKTVDFRNTVIIMTSNLGSELIQAHSTEVDFSKIK 737
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
VM V +FRPEFINRID+IIVF L + +++SIA IQL L+ +L + N + ++A
Sbjct: 738 NKVMESVSNHFRPEFINRIDEIIVFHRLEQHHLISIAKIQLQRLQQRLAERNYQISATEA 797
Query: 670 ALKKISNIGFDLIYGAR 686
L +S GFD +YGAR
Sbjct: 798 VLDLLSQRGFDPVYGAR 814
>gi|71891969|ref|YP_277699.1| ATP-dependent protease [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796075|gb|AAZ40826.1| ATP-dependent protease [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 858
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/686 (60%), Positives = 537/686 (78%), Gaps = 14/686 (2%)
Query: 3 IKNNSLNVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQR 62
I+NN L N QQ E L+K+T+D+T+ A G LDPVIGRD+EIRR IQVLQR
Sbjct: 143 IRNNHLVDN------QQSESQRQALQKFTVDITKFAEQGNLDPVIGRDEEIRRTIQVLQR 196
Query: 63 RSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFE 122
R+KNNPVLIG+PGVGKTAIVEGLAQRIINGEVP L +IL LD+ LLAGTKYRGEFE
Sbjct: 197 RTKNNPVLIGQPGVGKTAIVEGLAQRIINGEVPEGLKHSRILALDMGGLLAGTKYRGEFE 256
Query: 123 DRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTL 182
+RLK +L ++S +II+FIDELHTM+G GK +G++DA NMLKP LSRGELHC+GATTL
Sbjct: 257 ERLKSVLSDVSKEDSNIILFIDELHTMVGAGKTDGAMDASNMLKPRLSRGELHCVGATTL 316
Query: 183 NEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASEL 242
+EY +YIEKDAA ERRFQKI V EP +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ L
Sbjct: 317 DEYSKYIEKDAALERRFQKIFVSEPSVEDTIAILRGLKERYELHHNVHITDPAIVAAAIL 376
Query: 243 SYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDES 302
S+RYISDR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D++
Sbjct: 377 SHRYISDRQLPDKAIDLIDEAASSIRIQIDSKPEELDRLERRIIQLKLEQQALKKESDDA 436
Query: 303 SKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQ 362
S KRL L+ E+ + E Y NLEK WK EK + ++Q IK ++E+ ++ I++A R D
Sbjct: 437 SMKRLNLLTTELIQKEQNYINLEKEWKKEKVSLSNAQSIKSDLEQAKIAIDQARRVGDLA 496
Query: 363 TVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 422
+S+L+YG++ +LE+ L L +N K LL+ +V EIA ++SR TGIPVS+
Sbjct: 497 RMSELQYGKIPELEKKLS------TILQSNYKKIRLLRNRVTDIEIAAVLSRWTGIPVSR 550
Query: 423 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 482
++ E++KLL++E+ L + VVGQ EA+ A+S+AIRRSRSGLSD KRP GSFMFLGPTGVG
Sbjct: 551 MLASEKDKLLDMEHSLHQLVVGQHEAVKAISHAIRRSRSGLSDLKRPIGSFMFLGPTGVG 610
Query: 483 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 542
KTELCK LS +F+ +++RIDMSEF+EKHS+S+L+GAPPGYIGYE GGYLTE +RR+P
Sbjct: 611 KTELCKALSIFLFDTNNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYESGGYLTESIRRRP 670
Query: 543 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEME 601
YS+ILLDEIEKA+S++FN+LLQ+LDDGRLTD GRT++F NT+I+MTSNLGSD I K
Sbjct: 671 YSIILLDEIEKAHSEIFNVLLQVLDDGRLTDGHGRTVHFNNTVIIMTSNLGSDFIQKRFG 730
Query: 602 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 661
D + +K+AV+N V +FRPEF+NRID+I+VF L+ ++++ IA+IQL L ++L +
Sbjct: 731 IVDYQEVKVAVLNIVNQHFRPEFVNRIDEIVVFHPLSTEHLMKIASIQLQRLCDRLEEKG 790
Query: 662 M-DLKISKAALKKISNIGFDLIYGAR 686
+ I+ A L +S IGFD +YGAR
Sbjct: 791 YPNTNITNAVLVFLSKIGFDPVYGAR 816
>gi|440509763|ref|YP_007347199.1| Chaperone protein ClpB [Candidatus Blochmannia chromaiodes str.
640]
gi|440453976|gb|AGC03468.1| Chaperone protein ClpB [Candidatus Blochmannia chromaiodes str.
640]
Length = 858
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/686 (59%), Positives = 538/686 (78%), Gaps = 14/686 (2%)
Query: 3 IKNNSLNVNGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQR 62
I+NN L N QQ E L+K+T+D+T+ A G LDPVIGRD+EIRR IQVLQR
Sbjct: 143 IRNNHLVDN------QQSESQRQALQKFTVDITKFAEQGNLDPVIGRDEEIRRTIQVLQR 196
Query: 63 RSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFE 122
R+KNNPVLIG+PGVGKTAIVEGLAQRIINGEVP L ++L LD+ LLAGTKYRGEFE
Sbjct: 197 RTKNNPVLIGQPGVGKTAIVEGLAQRIINGEVPEGLKHSRVLALDMGGLLAGTKYRGEFE 256
Query: 123 DRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTL 182
+RLK +L ++S +II+FIDELHTM+G GK +G++DA NMLKP LSRGELHC+GATTL
Sbjct: 257 ERLKSVLSDVSKEDSNIILFIDELHTMVGAGKTDGAMDASNMLKPRLSRGELHCVGATTL 316
Query: 183 NEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASEL 242
+EY +YIEKDAA ERRFQKI V EP +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ L
Sbjct: 317 DEYSKYIEKDAALERRFQKIFVSEPSVEDTIAILRGLKERYELHHNVHITDPAIVAAAIL 376
Query: 243 SYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDES 302
S+RYISDR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D++
Sbjct: 377 SHRYISDRQLPDKAIDLIDEAASSIRIQIDSKPEELDRLERRIIQLKLEQQALKKESDDA 436
Query: 303 SKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQ 362
S KRL L+ E+ + E Y NLEK WK EK + ++Q IK ++E+ ++ I++A R D
Sbjct: 437 SMKRLNLLTTELIQKEKNYINLEKEWKKEKVSLSNAQSIKSDLEQAKIAIDQARRVGDLA 496
Query: 363 TVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 422
+S+L+YG++ +LE+ L L +N K LL+ +V EIA ++SR TGIPVS+
Sbjct: 497 RMSELQYGKIPELEKKLS------TILQSNYKKIRLLRNRVTDIEIAAVLSRWTGIPVSR 550
Query: 423 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 482
++ E++KLL++E+ L + VVGQ EA+ A+S+AIRRSRSGLSD KRP GSFMFLGPTGVG
Sbjct: 551 MLASEKDKLLDMEHSLHQLVVGQHEAVKAISHAIRRSRSGLSDLKRPIGSFMFLGPTGVG 610
Query: 483 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 542
KTELCK LS +F+ ++++RIDMSEF+EKHS+S+L+GAPPGYIGYE GGYLTE +RR+P
Sbjct: 611 KTELCKALSIFLFDTNKAMVRIDMSEFMEKHSVSKLLGAPPGYIGYESGGYLTESIRRRP 670
Query: 543 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEME 601
YS+ILLDEIEKA+S++FN+LLQ+LDDGRLTD GRT++F NT+I+MTSNLGSD I K
Sbjct: 671 YSIILLDEIEKAHSEIFNVLLQVLDDGRLTDGHGRTVHFNNTVIIMTSNLGSDFIQKRFG 730
Query: 602 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 661
D + +K+AV+N V +FRPEF+NRID+I+VF L+ ++++ IA+IQL L ++L +
Sbjct: 731 IVDYQEVKVAVLNIVNQHFRPEFVNRIDEIVVFHPLSTEHLMKIASIQLQRLCDRLEEKG 790
Query: 662 M-DLKISKAALKKISNIGFDLIYGAR 686
+ I+ A L +S IGFD +YGAR
Sbjct: 791 YPNTNITNAVLVFLSKIGFDPVYGAR 816
>gi|94676876|ref|YP_588651.1| ATP-dependent chaperone protein ClpB [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|94220026|gb|ABF14185.1| ATP-dependent chaperone protein ClpB [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
Length = 862
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/661 (60%), Positives = 526/661 (79%), Gaps = 7/661 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
LK++TI+LTE A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 164 LKQFTINLTELAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 223
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP L + ++L LD+ L+AG+KYRGEFE+RLK +L E+S + +II+FIDEL
Sbjct: 224 QRIVNGEVPEGLKNNRVLSLDMGALVAGSKYRGEFEERLKAVLNELSKLEGNIILFIDEL 283
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +G++DAGNMLKP LSRGELHC+GATTLNEYR +IEKDAA ERRFQK+ + E
Sbjct: 284 HTMVGAGKADGAMDAGNMLKPALSRGELHCVGATTLNEYRTFIEKDAALERRFQKVFIVE 343
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS RYI+DR +PDKAIDLIDEAA+
Sbjct: 344 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNRYIADRQLPDKAIDLIDEAASS 403
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I+++IDSKPE +D+LERR+IQLK+E +A+++E D++S KRL ++ KE+ + E YA LEK
Sbjct: 404 IRMQIDSKPEELDRLERRMIQLKLEQQALQKELDDASLKRLKILNKELAQKEHAYAKLEK 463
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
W+ EK + +Q+IK E+E+ ++ + +A R D +S+L+YG++ +LE+ L
Sbjct: 464 EWQAEKVSLSGAQKIKSELEQTKIYLEQARRIGDLARMSELQYGKIPELEKKLA------ 517
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ L + LL+ +V EI E+++R TGIPVS++++ ER K+L IE L +RVVGQ+
Sbjct: 518 VVLQSEGKNMRLLRNRVTEMEITEVLARWTGIPVSRMLESERTKILRIEQYLHQRVVGQN 577
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ AVSNAIRRSR+G++D RP GSFMFLGPTGVGKTELCK L+A +F+++ +I+RIDM
Sbjct: 578 EAVEAVSNAIRRSRAGIADPNRPIGSFMFLGPTGVGKTELCKALAAFVFDSDTAIVRIDM 637
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+E+HS+SR++GAPPGYIGYEEGG LTE VRR+PYS+ILLDEIEKA+ D+FN+LLQ+L
Sbjct: 638 SEFMERHSVSRMVGAPPGYIGYEEGGSLTEAVRRRPYSVILLDEIEKAHIDIFNLLLQLL 697
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 625
+DGRLTD GRT+NFRNTI++MTSNLGSD I E + + +K V++ V +FRPEFI
Sbjct: 698 EDGRLTDGHGRTVNFRNTIVIMTSNLGSDVINERFHQINYHDMKNIVVDVVCHHFRPEFI 757
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NRID+I+VF L +++L IA IQL L +L + + + IS L + GFD IYGA
Sbjct: 758 NRIDEIVVFHPLGHEDMLKIAQIQLQRLSKRLEEQGISITISDQVLTLLVKTGFDFIYGA 817
Query: 686 R 686
R
Sbjct: 818 R 818
>gi|297172751|gb|ADI23717.1| hypothetical protein [uncultured Oceanospirillales bacterium
HF4000_21D01]
Length = 889
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/682 (59%), Positives = 533/682 (78%), Gaps = 12/682 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+++ E+ L KY +D+TE+A G+LDPVIGRD EIRR IQVLQRR+KNNPVL
Sbjct: 161 GGESVDDAGAEDAWQALSKYCVDVTERAENGELDPVIGRDAEIRRTIQVLQRRTKNNPVL 220
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP L KKIL LD+ L+AG K+RGEFE+RLK +L
Sbjct: 221 IGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKKILSLDMGSLIAGAKFRGEFEERLKAVLN 280
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + II+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYRQ+IE
Sbjct: 281 ELSKQEGSIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGDLHCVGATTLDEYRQFIE 340
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LVEEP+ E+TI+ILRGL+++YEVHHGV+I+D AI+AA++LS RYI+DR
Sbjct: 341 KDAALERRFQKVLVEEPNEEDTIAILRGLKERYEVHHGVDISDSAIIAAAKLSQRYITDR 400
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++EIDSKPE MD LERRLIQLKIE EA+K++ D + KR +
Sbjct: 401 QLPDKAIDLIDEAASMIRMEIDSKPEEMDMLERRLIQLKIEQEALKKDEDPPALKRKAKL 460
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
++I +LE +YA+LE+IWK EK ++ +Q I+ +EK R + A R D +S+++YG
Sbjct: 461 AEDIQELEKEYADLEEIWKAEKASLQGTQIIRSSLEKARSDMELARRAGDLARMSEIQYG 520
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE L + + LL+ +V EEIA++VSR TGIPVSK+++ ++ K
Sbjct: 521 IIPGLEEKLTTAAAAEAAEKQ------LLRNRVTEEEIADVVSRATGIPVSKMLEEDKLK 574
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL++E L +RV+GQ EA+ AV+NA+RRSRSGLSD RP GSFMFLGPTGVGKTELCK L
Sbjct: 575 LLDMEAALHRRVIGQHEAVVAVANAVRRSRSGLSDPNRPNGSFMFLGPTGVGKTELCKAL 634
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E++++RIDMSEF+E+HS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++LLDE
Sbjct: 635 AEFLFDTEDAMVRIDMSEFMERHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDE 694
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK---- 605
+EKA+ DVFNILLQ+LDDGRLTD GRT++FRNT+IVMTSNLGSD+I+E ME G
Sbjct: 695 VEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSDRIQELMETGADDEES 754
Query: 606 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 664
E +K V++ V +F PEF+NRID+ +VF L ++ I +IA IQL +L +L+ + L
Sbjct: 755 YEAVKKIVLDVVAKHFSPEFVNRIDETVVFHPLGKEQIRAIAEIQLELLNQRLVNNELAL 814
Query: 665 KISKAALKKISNIGFDLIYGAR 686
K+S A L I++ G+D +YGAR
Sbjct: 815 KVSDAVLDHIASTGYDPVYGAR 836
>gi|319760324|ref|YP_004124262.1| chaperone protein ClpB [Candidatus Blochmannia vafer str. BVAF]
gi|318039038|gb|ADV33588.1| chaperone protein ClpB [Candidatus Blochmannia vafer str. BVAF]
Length = 862
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/662 (61%), Positives = 530/662 (80%), Gaps = 8/662 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
LKK+T+D+T+ A G LDPVIGRD+EIRR IQVLQRR+KNNPVLIG PGVGKTAIVEGLA
Sbjct: 162 LKKFTVDITKFAEQGNLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGNPGVGKTAIVEGLA 221
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIINGEVP+ L + +IL LDIA LLAGTKYRGEFE+R KK+L + + +II+FIDEL
Sbjct: 222 QRIINGEVPDGLKNSRILSLDIAALLAGTKYRGEFEERFKKVLNSLVSKDSNIILFIDEL 281
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
H M+G GK +G++DA NM+KP+L+RGELHC+GATT +EY +YIEKDAA ERRFQKI + E
Sbjct: 282 HVMVGAGKTDGAMDASNMIKPKLARGELHCVGATTFDEYSKYIEKDAALERRFQKIFIIE 341
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P+I++TI+ILRGL+++YE+HH V ITDPAIVAA+ LS RYISDR +PDKAIDLIDEAA+
Sbjct: 342 PNIKDTIAILRGLKERYELHHNVHITDPAIVAAATLSKRYISDRQLPDKAIDLIDEAASS 401
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I+I+IDSKPE +D+L+RR+IQLK+E +A+K+E D++SKKRL ++KKE+ + E Y LE
Sbjct: 402 IRIQIDSKPEDLDRLDRRIIQLKLEKQALKKESDKASKKRLEILKKELMEQESAYLVLES 461
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
WK EK+ + D Q IK ++EK ++ + +A R D +S+L+YG + LE+ L +Q
Sbjct: 462 EWKREKSSLSDIQNIKSDLEKAKIALEQARRFGDLDKMSELQYGSIPSLEKKLLNATQ-- 519
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+N K LL+ V EIAE++S+ TGIP+S+I+ E+ KLLN+E +L + V+GQD
Sbjct: 520 ----SNNKKMRLLRNYVSETEIAEVLSKWTGIPISRILTNEKCKLLNMEKILHQLVIGQD 575
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
+A+ +VSNAIRRSRSGLSD KRP GSFMFLGPTGVGKTELCK+LS +F+ + +++RIDM
Sbjct: 576 DAVQSVSNAIRRSRSGLSDPKRPIGSFMFLGPTGVGKTELCKSLSYFLFDTDSAMVRIDM 635
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS+S+L+GAPPGYIGYE GGYLTE VRR+PYS++LLDEIEKA+SD+FN+LLQ+L
Sbjct: 636 SEFMEKHSVSKLLGAPPGYIGYETGGYLTEAVRRRPYSIVLLDEIEKAHSDIFNVLLQVL 695
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTDN+GRTINF NT+++MTSNLGSD I K+ + D +K V+N V YF+PEFI
Sbjct: 696 DDGRLTDNQGRTINFSNTVMIMTSNLGSDLIQKKFKSLDYFEMKTMVLNVVNQYFKPEFI 755
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL-KISKAALKKISNIGFDLIYG 684
NRID+I+VF LN ++++ IANIQL L ++L + I+K AL +S IG+D +YG
Sbjct: 756 NRIDEIVVFHPLNIEHLIKIANIQLKELCHRLEEKGYPCTHITKEALLFLSKIGYDSVYG 815
Query: 685 AR 686
AR
Sbjct: 816 AR 817
>gi|416247887|ref|ZP_11635979.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC8]
gi|326568746|gb|EGE18816.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC8]
Length = 858
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/679 (58%), Positives = 540/679 (79%), Gaps = 6/679 (0%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G ++ Q+ E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNN
Sbjct: 139 NIRGDEAVTNQNSEQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK
Sbjct: 199 PVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+L E++ +II+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I+ + +Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L
Sbjct: 439 KSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YGE+ LE+ L E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q E
Sbjct: 499 QYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL
Sbjct: 554 RNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPYED 733
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AVM V +FRPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S
Sbjct: 734 IKTAVMTSVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVS 793
Query: 668 KAALKKISNIGFDLIYGAR 686
A+ + ++G+D ++GAR
Sbjct: 794 DEAMNHLVSVGYDPVFGAR 812
>gi|416243668|ref|ZP_11634003.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC7]
gi|326568620|gb|EGE18691.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC7]
Length = 858
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/679 (58%), Positives = 540/679 (79%), Gaps = 6/679 (0%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G ++ Q+ E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNN
Sbjct: 139 NIRGDEAVTNQNSEQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK
Sbjct: 199 PVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+L E++ +II+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I+ + +Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L
Sbjct: 439 KSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YGE+ LE+ L E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q E
Sbjct: 499 QYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL
Sbjct: 554 RNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSSYED 733
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AVM V +FRPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S
Sbjct: 734 IKTAVMASVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVS 793
Query: 668 KAALKKISNIGFDLIYGAR 686
A+ + ++G+D ++GAR
Sbjct: 794 DEAMNHLVSVGYDPVFGAR 812
>gi|296113575|ref|YP_003627513.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis RH4]
gi|295921269|gb|ADG61620.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BBH18]
Length = 858
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/679 (58%), Positives = 540/679 (79%), Gaps = 6/679 (0%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G ++ Q+ E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNN
Sbjct: 139 NIRGDEAVTNQNSEQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK
Sbjct: 199 PVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+L E++ +II+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I+ + +Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L
Sbjct: 439 KSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YGE+ LE+ L E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q E
Sbjct: 499 QYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL
Sbjct: 554 RNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPYED 733
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AVM V +FRPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S
Sbjct: 734 IKTAVMASVTRHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVS 793
Query: 668 KAALKKISNIGFDLIYGAR 686
A+ + ++G+D ++GAR
Sbjct: 794 DEAMNHLVSVGYDPVFGAR 812
>gi|416218528|ref|ZP_11624942.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 7169]
gi|326559576|gb|EGE09990.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 7169]
Length = 858
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/679 (58%), Positives = 540/679 (79%), Gaps = 6/679 (0%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G ++ Q+ E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNN
Sbjct: 139 NIRGDEAVTNQNSEQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK
Sbjct: 199 PVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+L E++ +II+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I+ + +Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L
Sbjct: 439 KSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YGE+ LE+ L E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q E
Sbjct: 499 QYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL
Sbjct: 554 RNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSSYED 733
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AVM V +FRPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S
Sbjct: 734 IKTAVMASVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVS 793
Query: 668 KAALKKISNIGFDLIYGAR 686
A+ + ++G+D ++GAR
Sbjct: 794 DEAMNHLVSVGYDPVFGAR 812
>gi|416227810|ref|ZP_11627294.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 46P47B1]
gi|416252188|ref|ZP_11638023.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis CO72]
gi|421780382|ref|ZP_16216871.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis RH4]
gi|326564678|gb|EGE14896.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 46P47B1]
gi|326572614|gb|EGE22603.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis CO72]
gi|407812538|gb|EKF83323.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis RH4]
Length = 858
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/679 (58%), Positives = 540/679 (79%), Gaps = 6/679 (0%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G ++ Q+ E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNN
Sbjct: 139 NIRGDEAVTNQNSEQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK
Sbjct: 199 PVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+L E++ +II+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I+ + +Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L
Sbjct: 439 KSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YGE+ LE+ L E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q E
Sbjct: 499 QYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL
Sbjct: 554 RNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPYED 733
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AVM V +FRPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S
Sbjct: 734 IKTAVMASVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVS 793
Query: 668 KAALKKISNIGFDLIYGAR 686
A+ + ++G+D ++GAR
Sbjct: 794 DEAMNHLVSVGYDPVFGAR 812
>gi|416234148|ref|ZP_11629697.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 12P80B1]
gi|326565494|gb|EGE15665.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 12P80B1]
Length = 858
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/679 (58%), Positives = 540/679 (79%), Gaps = 6/679 (0%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G ++ Q+ E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNN
Sbjct: 139 NIRGDEAVTNQNSEQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK
Sbjct: 199 PVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+L E++ +II+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I+ + +Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L
Sbjct: 439 KSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YGE+ LE+ L E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q E
Sbjct: 499 QYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL
Sbjct: 554 RNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPYED 733
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AVM V +FRPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S
Sbjct: 734 IKTAVMASVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVS 793
Query: 668 KAALKKISNIGFDLIYGAR 686
A+ + ++G+D ++GAR
Sbjct: 794 DEAMNHLVSVGYDPVFGAR 812
>gi|416238939|ref|ZP_11631622.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC1]
gi|326567744|gb|EGE17850.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC1]
Length = 858
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/679 (58%), Positives = 539/679 (79%), Gaps = 6/679 (0%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G ++ Q+ E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNN
Sbjct: 139 NIRGDEAVTNQNSEQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK
Sbjct: 199 PVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+L E++ +II+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I+ + +Y+ LE++WK EK ++ S+Q + +++ R+ + KA R+ D+ S+L
Sbjct: 439 KSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQFQAKLDTARITLEKALREGDYARASQL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YGE+ LE+ L E+ + P +A K LL+ KV EIAE+VS TGIPV+K++Q E
Sbjct: 499 QYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL
Sbjct: 554 RNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSSYED 733
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AVM V +FRPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S
Sbjct: 734 IKTAVMASVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVS 793
Query: 668 KAALKKISNIGFDLIYGAR 686
A+ + ++G+D ++GAR
Sbjct: 794 DEAMNHLVSVGYDPVFGAR 812
>gi|416157355|ref|ZP_11605098.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 101P30B1]
gi|416224348|ref|ZP_11626489.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 103P14B1]
gi|416255816|ref|ZP_11639385.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis O35E]
gi|326562685|gb|EGE12987.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 103P14B1]
gi|326574211|gb|EGE24159.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 101P30B1]
gi|326574996|gb|EGE24925.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis O35E]
Length = 858
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/679 (58%), Positives = 539/679 (79%), Gaps = 6/679 (0%)
Query: 9 NVNGKNILSQQD-EEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNN 67
N+ G ++ Q+ E++ L KYTI+LTE+A GKLDPVIGRDDEIRR +QVL RR+KNN
Sbjct: 139 NIRGDEAVTNQNSEQNRQALDKYTINLTERAMAGKLDPVIGRDDEIRRTVQVLSRRTKNN 198
Query: 68 PVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKK 127
PVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+ L+AG KY GEFE+RLK
Sbjct: 199 PVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERLKA 258
Query: 128 ILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQ 187
+L E++ +II+FIDELHTM+G GK G++DAGNMLKP L+RGEL C+GATTL+EYRQ
Sbjct: 259 VLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEYRQ 318
Query: 188 YIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYI 247
YIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+RYI
Sbjct: 319 YIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHRYI 378
Query: 248 SDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRL 307
+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D +K ++
Sbjct: 379 TDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKSQV 438
Query: 308 LLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKL 367
++++I+ + +Y+ LE++WK EK ++ S+Q++ +++ R+ + KA R+ D+ S+L
Sbjct: 439 KSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARASQL 498
Query: 368 KYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVE 427
+YGE+ LE+ L E+ + P + K LL+ KV EIAE+VS TGIPV+K++Q E
Sbjct: 499 QYGEIIALEKQLAEEQTDE---PEHTPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQGE 553
Query: 428 REKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELC 487
R KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD +P GSF+FLGPTGVGKTEL
Sbjct: 554 RNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTELT 613
Query: 488 KTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLIL 547
K L+ +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L
Sbjct: 614 KALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVL 673
Query: 548 LDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEI 607
DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS I EM E
Sbjct: 674 FDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPYED 733
Query: 608 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 667
IK AVM V +FRPEFINRID+I+VF L + IA IQL+ L+ +L + + L +S
Sbjct: 734 IKTAVMTSVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLSVS 793
Query: 668 KAALKKISNIGFDLIYGAR 686
A+ + ++G+D ++GAR
Sbjct: 794 DEAMNHLVSVGYDPVFGAR 812
>gi|336314900|ref|ZP_08569814.1| ATP-dependent chaperone ClpB [Rheinheimera sp. A13L]
gi|335880727|gb|EGM78612.1| ATP-dependent chaperone ClpB [Rheinheimera sp. A13L]
Length = 861
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/677 (59%), Positives = 535/677 (79%), Gaps = 7/677 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+N+ EE L KYT+DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVL
Sbjct: 145 GGQNVDDPNAEESRQALTKYTVDLTARAEAGKLDPVIGRDEEIRRCIQVLQRRTKNNPVL 204
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLA RIIN EVP L K++L LD+ LLAG KYRGEFE+RLK +L
Sbjct: 205 IGEPGVGKTAIVEGLALRIINKEVPEGLKDKRVLSLDMGSLLAGAKYRGEFEERLKAVLN 264
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
E+S + +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR+YIE
Sbjct: 265 ELSKEEGRVILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEYRKYIE 324
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+SDR
Sbjct: 325 KDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHRYVSDR 384
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E A+ +E DE++KKR +I
Sbjct: 385 QLPDKAIDLIDEAASSIRMQMDSKPEELDRLERRIIQLKLEDNALAKETDEATKKRRDMI 444
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+++I +L++KY L+++W EK ++ +Q IK ++E+ RL + A R D +S+LKY
Sbjct: 445 QEQIRELDLKYNELDEVWSSEKAALQGTQNIKADLEQARLDMEVARRAGDLNRMSQLKYE 504
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
+ LE+ L SQ ++ ++ TLL+ KV +EIA+++S+ TGIPVSK+++ ER+K
Sbjct: 505 RIPALEKRLDLASQVEM------HEMTLLRNKVTEQEIADVLSKATGIPVSKMLEGERDK 558
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E L KRVVGQ EA+ AVSN+IRRSR+GL+D +P GSF+FLGPTGVGKTEL K L
Sbjct: 559 LLRMEQELQKRVVGQAEALEAVSNSIRRSRAGLADPNKPIGSFLFLGPTGVGKTELTKAL 618
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+ +F+ E+++IRIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS++LLDE
Sbjct: 619 AQFLFDTEDALIRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDE 678
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIK 609
+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + D + +K
Sbjct: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDLIQEHYQHQDYQQMK 738
Query: 610 LAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKA 669
+M + FRPEF+NR+D+ +VF L+ +I IA+IQL L+ +L L ++ A
Sbjct: 739 DMLMEVLSKQFRPEFLNRLDETVVFHPLDSAHIRHIASIQLQRLRLRLQDKGFALSVTDA 798
Query: 670 ALKKISNIGFDLIYGAR 686
AL ++ GFD ++GAR
Sbjct: 799 ALDLLAAAGFDAVFGAR 815
>gi|403053914|ref|ZP_10908398.1| clpB [Acinetobacter bereziniae LMG 1003]
gi|445412446|ref|ZP_21433190.1| ATP-dependent chaperone protein ClpB [Acinetobacter sp. WC-743]
gi|444767082|gb|ELW91335.1| ATP-dependent chaperone protein ClpB [Acinetobacter sp. WC-743]
Length = 859
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 535/678 (78%), Gaps = 8/678 (1%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ +++ E+ L KYTIDLT +A GKLDPVIGRD+EIRR IQVL RR+KNNPVL
Sbjct: 142 GGEQVMANNHEDQRDSLNKYTIDLTARAAEGKLDPVIGRDEEIRRTIQVLSRRTKNNPVL 201
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRIINGEVP L K++L LD+ LLAG KYRGEFE+RLK +LK
Sbjct: 202 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGKRVLSLDLGSLLAGAKYRGEFEERLKAVLK 261
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EYRQ+IE
Sbjct: 262 DLAKFDGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQFIE 321
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK+LV+EP +E+TI+ILRGL+ KY HHGV+I D AI+AA+++S+RYI+DR
Sbjct: 322 KDAALERRFQKVLVDEPSVEDTIAILRGLKDKYATHHGVQILDSAIIAAAKMSHRYITDR 381
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAA++IK+EIDSKPE +D+L+RRLIQLK++ EA+K++ D SK + +
Sbjct: 382 QLPDKAIDLIDEAASRIKMEIDSKPEALDRLDRRLIQLKMQLEAVKKDADSVSKAEVEHL 441
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+K+I +++ +Y++LE++W EK L+ + Q + E++K R KA R+ D S+L+YG
Sbjct: 442 EKQIAEVQKEYSDLEEVWIAEKRLVDGTNQAQIELDKARTAFEKAQREGDLAEASRLQYG 501
Query: 371 ELNKLE-RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVERE 429
+ +L+ R+ +E+ + + P L++TKV EIAE+VS TGIPVSK++Q ERE
Sbjct: 502 VIPELQKRLNEEEVAEVNEEPK------LIRTKVTENEIAEVVSAATGIPVSKMLQGERE 555
Query: 430 KLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKT 489
KLL++E+ L RVVGQDEA+ AV+NA+RRSR+GLSD RP GSF+FLGPTGVGKTEL K
Sbjct: 556 KLLHMEDFLHNRVVGQDEAVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKA 615
Query: 490 LSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLD 549
L +F+++++IIRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS++L D
Sbjct: 616 LGNFLFDSDDAIIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFD 675
Query: 550 EIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-DKEII 608
E+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS ++E+ +G E +
Sbjct: 676 EVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSSDVRELGEGASDEDV 735
Query: 609 KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISK 668
+ VMN V +FRPEFINRID+++VF L + I IA+IQL+ L+ +L + ++ L +
Sbjct: 736 RATVMNAVSQHFRPEFINRIDELVVFHSLKKSQIRGIADIQLDRLRARLAERDIRLNVDD 795
Query: 669 AALKKISNIGFDLIYGAR 686
A + + GFD +YGAR
Sbjct: 796 QAFDILIDAGFDPVYGAR 813
>gi|400405050|ref|YP_006587909.1| ATP-dependent chaperone ClpB [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400363413|gb|AFP84481.1| ATP-dependent chaperone ClpB [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 857
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/703 (57%), Positives = 537/703 (76%), Gaps = 15/703 (2%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
LKK+T+DLT +A GKLDPVIGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LKKFTVDLTARAAQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP L ++L LD+ L+AG KYRGEFE+RLK +L ++ + ++ +FIDEL
Sbjct: 221 QRIVNGEVPEGLKKNRVLSLDMGSLVAGAKYRGEFEERLKSVLNDLLKEEGNVTLFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTMIG G EG+IDA NMLKP L+RGELHCIGATTL+EYR++IEKDAA ERRFQK+ V E
Sbjct: 281 HTMIGAGNAEGTIDACNMLKPALARGELHCIGATTLDEYRKFIEKDAALERRFQKVFVVE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P++E TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 341 PNVENTIAILRGLKERYELHHNVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I+I+IDSKPE +D+LERR++QLK+E +A+K+E DE+S KRL L+ E+ K E Y+ LE+
Sbjct: 401 IRIQIDSKPEELDRLERRIMQLKLEQQALKKESDEASIKRLALLHDELAKKESDYSALEE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
WK EK + +Q +K +E+ ++ I +A R D +S+L+YG + +LE+ L+ +
Sbjct: 461 KWKAEKASLSGTQYLKATLEQAKISIEQARRACDLARMSELQYGTIPELEKKLEAAAT-- 518
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
F LL+ +V EIAE+V+R TGIPVS++++ EREKLL +E L + V+GQ
Sbjct: 519 ----FKEEGFCLLRNRVTDIEIAEVVARWTGIPVSRMLESEREKLLRMEQDLHQWVIGQH 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EA+ AVSNAIRRSR+GL+D RP GSFMFLGPTGVGKTELCK L+ +F++ ++++RIDM
Sbjct: 575 EAVEAVSNAIRRSRAGLADPNRPIGSFMFLGPTGVGKTELCKALTTFLFDSYDAMLRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTETVRRRPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD++GRT++FRNT+++MTSNLGS+ I+E + + +K V++ V +FRPEF+
Sbjct: 695 DDGRLTDSQGRTVDFRNTVVIMTSNLGSELIQERFGQMSYQEMKRIVLDVVSHHFRPEFL 754
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NR+D+I+VF L+R++I I IQL L +L + IS+ L + GFD +YGA
Sbjct: 755 NRVDEIVVFHPLSREDISDIVQIQLQRLYQRLEERGYKTTISEEVLALLEQSGFDPVYGA 814
Query: 686 RDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLDTL 728
R + K+++ + ++P + I G L+ P L L
Sbjct: 815 RPL---KRTIQQAI-----ENPLSQQILSGQLLPGKPVHLQVL 849
>gi|118602768|ref|YP_903983.1| ATPase [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|118567707|gb|ABL02512.1| ATPase AAA-2 domain protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 859
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/675 (59%), Positives = 526/675 (77%), Gaps = 9/675 (1%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
GKN+ Q E + LKKYT DLT+ A KLDPVIGRD EIRRAIQVLQRR+KNNPVLI
Sbjct: 153 GKNVNDQNAENNRDTLKKYTQDLTQLAIDSKLDPVIGRDSEIRRAIQVLQRRTKNNPVLI 212
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
G+PGVGKTAIVEGLAQRIIN EVP + K++L LD+A L+AG KYRGEFE+RLK +LKE
Sbjct: 213 GKPGVGKTAIVEGLAQRIINNEVPEGIKGKRVLSLDMAALVAGAKYRGEFEERLKAVLKE 272
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
+ Q +I+FIDELHT++G+ K +G++DAGNMLKP L+RG+LHC+GATTL+EYRQYIEK
Sbjct: 273 LEAEQGQVILFIDELHTVVGSSKSDGAMDAGNMLKPALARGDLHCMGATTLDEYRQYIEK 332
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
D+A ERRFQK+LV+E ++TI+ILRGL++KYEVHHGVEITDPAI+AA S RYI+DR
Sbjct: 333 DSALERRFQKVLVDESTEQDTIAILRGLKEKYEVHHGVEITDPAIIAAVTYSTRYITDRQ 392
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDLIDEAA++I++EIDSKPE MDKL+R+L+QLKIE A+K+E D++SK RL +
Sbjct: 393 LPDKAIDLIDEAASQIRMEIDSKPESMDKLDRKLVQLKIERMALKKEKDKASKVRLKELV 452
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
I LE +Y +LE+IWK EK +++D+ +KEE+E+ + A R +D +S+L+YG
Sbjct: 453 ALIQSLEKEYTDLEEIWKKEKLVVQDAHHLKEELEQAKANFENAHRNNDLAKMSELQYGI 512
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
+ +LE+ + D Q + TLL+ KV +EIA IV+R TGIP+ K++ E++KL
Sbjct: 513 IPELEKKIGTTENADTQ------QMTLLRNKVTEDEIAHIVARWTGIPMDKMIAGEKDKL 566
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L +E ++ KR+VGQD+A+ +SNAIRR+RSGLSD RP GSF+F+GPTGVGKTEL K L+
Sbjct: 567 LKMEAIIHKRLVGQDKAVKVISNAIRRARSGLSDPNRPDGSFLFMGPTGVGKTELTKALA 626
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F+ E++I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GG LTE VRRKPYS+ILLDEI
Sbjct: 627 DFLFDTEQAIVRVDMSEFMEKHSVARLIGAPPGYVGYEQGGMLTEAVRRKPYSIILLDEI 686
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLA 611
EKA+ DVFNILLQ+LDDGRLTD +GRTI+F+NT+I+MTSNLGS I++ D
Sbjct: 687 EKAHLDVFNILLQVLDDGRLTDGQGRTIDFKNTVIIMTSNLGSYLIQQNPGKDMSAELSK 746
Query: 612 VMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAAL 671
++NE +FRPEF+NRID+II F+ L + I IA Q+ IL +L K+N+ L +S A+
Sbjct: 747 IVNE---HFRPEFVNRIDEIITFKMLEKYQIKDIALKQIEILSVRLAKLNLKLTLSNTAI 803
Query: 672 KKISNIGFDLIYGAR 686
I + G+D ++GAR
Sbjct: 804 NMIVDRGYDPVFGAR 818
>gi|226881149|gb|ACO90024.1| ClpB [Psychromonas arctica]
Length = 858
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/661 (59%), Positives = 525/661 (79%), Gaps = 7/661 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L+KYTIDLTE+A GKLDPVIGRDDE+RR +QVLQRR+KNNPV+IGEPGVGKTAIVEGLA
Sbjct: 161 LEKYTIDLTERAAAGKLDPVIGRDDEVRRIVQVLQRRTKNNPVIIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIINGEVP L K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 221 QRIINGEVPEGLKGKRVLSLDMGSLIAGAKYRGEFEERLKAVLAELNKEEGQVILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +G++DA NMLKP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK++V+E
Sbjct: 281 HTMVGAGKGDGAMDASNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVIVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYISDR +PDKAIDLIDEAA+
Sbjct: 341 PSVEDTIAILRGLKERYELHHKVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I+++IDSKPE +DKL R++IQL +E ++++ DE+S KRL +++ + +Y L++
Sbjct: 401 IRLQIDSKPESLDKLGRKIIQLTVEQKSLQNSSDEASIKRLNDLEQTLKSKGTEYKELDE 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK + +Q IK+ +E+ RL + A+R SD +S+L+YG + LE+ L SQ +
Sbjct: 461 IWKTEKAALSGTQNIKQALEQARLDLEVASRASDLTRMSELQYGRIPDLEKQLDLASQVE 520
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+Q + TLLK V EIA+I++ TGIPVSK+++ ER+KLL +E L +VVGQ+
Sbjct: 521 MQ------EMTLLKHSVTENEIADILAHWTGIPVSKMLEGERDKLLKMEKYLHSQVVGQN 574
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EAI AVSNAIRRSR+GLSD RP GSF+FLGPTGVGKTE CK L+ +F++ ++++RIDM
Sbjct: 575 EAIEAVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTESCKALANFLFDSVDNMVRIDM 634
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 635 SEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 694
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++FRNT+I+MTSN+GS+ I+E + + +K ++ + F+PEF+
Sbjct: 695 DDGRLTDGKGRTVDFRNTVIIMTSNIGSEIIQEAFPRASYDDVKNTLLGILAKQFKPEFL 754
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NRID+ +VF L+ K+I SIA IQL+ L+ +L + L + A+++ + G+D +YGA
Sbjct: 755 NRIDETVVFHPLSEKHIKSIATIQLHALQARLKERGYLLTFNDASIELLVEAGYDPMYGA 814
Query: 686 R 686
R
Sbjct: 815 R 815
>gi|148244858|ref|YP_001219552.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Vesicomyosocius okutanii HA]
gi|146326685|dbj|BAF61828.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Vesicomyosocius okutanii HA]
Length = 852
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/662 (60%), Positives = 525/662 (79%), Gaps = 13/662 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L KYT DLT+ A GKLDPVIGRD EIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLA
Sbjct: 161 LNKYTQDLTQLAIDGKLDPVIGRDSEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRIIN EV + K++L LD+ L+AG KYRGEFE+RLK +LKE+ + Q II+FIDEL
Sbjct: 221 QRIINHEVSEGIKGKRVLSLDMTALIAGAKYRGEFEERLKVVLKELEDKQGQIILFIDEL 280
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK +GS+DAGN+LKP L+RG+LHCIGATTLNEYRQYIEKD+A ERRFQK+LV+E
Sbjct: 281 HTMVGIGKSDGSMDAGNILKPALARGDLHCIGATTLNEYRQYIEKDSALERRFQKVLVDE 340
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P ++TI+ILRGL++KYEVHHGVEITDPAI+ A S RYI+DR +PDKAIDLIDEAA++
Sbjct: 341 PTEQDTIAILRGLKEKYEVHHGVEITDPAIIVAVTYSTRYITDRQLPDKAIDLIDEAASQ 400
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDSKPE MDKL+R+L+QLKIE A+K+E D++SK RL + K I LE +YANLEK
Sbjct: 401 IRMEIDSKPESMDKLDRKLVQLKIERMALKKEKDKASKTRLEELVKLIKSLEKEYANLEK 460
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
IWK EK +++ + +KEE+E+ + + A R ++ +S+L+YG I+ E QK
Sbjct: 461 IWKKEKLVVQSAHHLKEELEQAKSDLENAHRNNNLAKMSELQYG-------IIPELEQK- 512
Query: 387 IQLPNNAN--KFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVG 444
I + NA+ + TLL+ KV EIA IV+R TGIPV K++ E++KLL +E ++ KR+VG
Sbjct: 513 INMAENADTEQMTLLRNKVTENEIAHIVARWTGIPVDKMMAGEKDKLLQMETIIHKRLVG 572
Query: 445 QDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRI 504
QD+A+ +S+A+RR+RSGLSD RP GSF+F+GPTGVGKTEL K L+ +F+ E++I+RI
Sbjct: 573 QDKAVKVISDAVRRARSGLSDPNRPDGSFLFMGPTGVGKTELTKALADFLFDTEQAIVRI 632
Query: 505 DMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQ 564
DMSEF+EKHS++RLIGAPPGY+GYE+GG LTE VRRKPYS+ILLDEIEKA+SD+FNILLQ
Sbjct: 633 DMSEFMEKHSVARLIGAPPGYVGYEQGGVLTEAVRRKPYSIILLDEIEKAHSDLFNILLQ 692
Query: 565 ILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLAVMNEVKIYFRPEF 624
+LDDGRLTD++GRT++F+NTII+MTSNLGS I++ D + +++E +FRPEF
Sbjct: 693 VLDDGRLTDSQGRTVDFKNTIIIMTSNLGSHLIQQNPGKDMSVELTKIVSE---HFRPEF 749
Query: 625 INRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYG 684
+NRID+I+ F+ L + I IA Q+ IL ++L K+N+ + +S A+ I N G++ ++G
Sbjct: 750 VNRIDEIVTFKTLEKSQIKGIALRQIEILSSRLSKLNLRITLSDIAISMIVNKGYNPVFG 809
Query: 685 AR 686
AR
Sbjct: 810 AR 811
>gi|417729516|ref|ZP_12378211.1| chaperone protein clpB [Shigella flexneri K-671]
gi|419192641|ref|ZP_13736093.1| chaperone protein ClpB [Escherichia coli DEC7E]
gi|332754018|gb|EGJ84390.1| chaperone protein clpB [Shigella flexneri K-671]
gi|378037994|gb|EHW00516.1| chaperone protein ClpB [Escherichia coli DEC7E]
Length = 678
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/642 (60%), Positives = 517/642 (80%), Gaps = 7/642 (1%)
Query: 46 VIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILL 105
+IGRD+EIRR IQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRIINGEVP L +++L
Sbjct: 1 MIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 60
Query: 106 LDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNML 165
LD+ L+AG KYRGEFE+RLK +L +++ + ++I+FIDELHTM+G GK +G++DAGNML
Sbjct: 61 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 120
Query: 166 KPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEV 225
KP L+RGELHC+GATTL+EYRQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+
Sbjct: 121 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 180
Query: 226 HHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRL 285
HH V+ITDPAIVAA+ LS+RYI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+
Sbjct: 181 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 240
Query: 286 IQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEI 345
IQLK+E +A+ +E DE+SKKRL ++ +E++ E +Y+ LE+ WK EK + +Q IK E+
Sbjct: 241 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 300
Query: 346 EKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGS 405
E+ ++ I +A R D +S+L+YG++ +LE+ L+ +Q + LL+ KV
Sbjct: 301 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTD 354
Query: 406 EEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSD 465
EIAE+++R TGIPVS++++ EREKLL +E L RV+GQ+EA+ AVSNAIRRSR+GL+D
Sbjct: 355 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 414
Query: 466 AKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGY 525
RP GSF+FLGPTGVGKTELCK L+ +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY
Sbjct: 415 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 474
Query: 526 IGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTI 585
+GYEEGGYLTE VRR+PYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+
Sbjct: 475 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 534
Query: 586 IVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILS 644
++MTSNLGSD I+E + D +K V+ V FRPEFINRID+++VF L ++I S
Sbjct: 535 VIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 594
Query: 645 IANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
IA IQL L +L + ++ IS ALK +S G+D +YGAR
Sbjct: 595 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 636
>gi|83859253|ref|ZP_00952774.1| endopeptidase Clp: ATP-binding subunit B, clpB [Oceanicaulis sp.
HTCC2633]
gi|83852700|gb|EAP90553.1| endopeptidase Clp: ATP-binding subunit B, clpB [Oceanicaulis
alexandrii HTCC2633]
Length = 874
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/691 (56%), Positives = 530/691 (76%), Gaps = 11/691 (1%)
Query: 2 GIKNNSLNV------NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRR 55
G+ +LN G+ SQ E+ LKKY DLTE AR GKLDPVIGRD+EIRR
Sbjct: 131 GVTPQALNTAVNDLRQGRTADSQSAEDSYEALKKYARDLTEVAREGKLDPVIGRDEEIRR 190
Query: 56 AIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGT 115
A+QVL RR+KNNPVLIGEPGVGKTAI EGLA RI+NG+VP SL K++L LD+ L+AG
Sbjct: 191 AVQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKGKRLLALDMGSLIAGA 250
Query: 116 KYRGEFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELH 175
KYRGEFE+RLK +L E+ +II+FIDE+HT++G GK +G++DA N+LKP L+RGELH
Sbjct: 251 KYRGEFEERLKSVLNEVEAAGGNIILFIDEMHTLVGAGKTDGAMDASNLLKPALARGELH 310
Query: 176 CIGATTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPA 235
C+GATTL+EYR+++EKDAA RRFQ + VEEP +E+TISILRGL++KYEVHHGV I D A
Sbjct: 311 CVGATTLDEYRKHVEKDAALARRFQPVFVEEPTVEDTISILRGLKEKYEVHHGVRIADGA 370
Query: 236 IVAASELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAI 295
IVAA+ LS RYI+DRF+PDKAIDL+DEA+A++++++DSKPE +D+L+RR+IQLKIE EA+
Sbjct: 371 IVAAATLSNRYITDRFLPDKAIDLMDEASARLRMQVDSKPEELDELDRRIIQLKIEAEAL 430
Query: 296 KREYDESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKA 355
K+E DE+SKKRL + KE+++LE + A L W+ EK + S ++KE ++++R ++ A
Sbjct: 431 KKEGDEASKKRLETLNKELSELEGRSAELTAAWRAEKDKLASSTELKERLDRLRAELADA 490
Query: 356 TRKSDWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRT 415
R+ D S+LKYG++ ++E+ LKE N+++ L+K V E+IA +VSR
Sbjct: 491 ERRGDLGKASELKYGQIPQIEKQLKEAEDAADGAANDSS--ALVKEVVDEEQIAAVVSRW 548
Query: 416 TGIPVSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMF 475
TG+PV K+++ EREKLL +E L KRVVGQ+EA+ AVS+A+RRSR+GL D RP GSF+F
Sbjct: 549 TGVPVDKMLEGEREKLLAMEEGLRKRVVGQEEALEAVSDAVRRSRAGLKDPSRPIGSFLF 608
Query: 476 LGPTGVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLT 535
LGPTGVGKTEL K L+ +F++E ++ R+DMSE++EKHS++RLIGAPPGY+GYEEGG LT
Sbjct: 609 LGPTGVGKTELTKALAEFLFDDETAVTRMDMSEYMEKHSVARLIGAPPGYVGYEEGGALT 668
Query: 536 EIVRRKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSD 595
E VRR+PY ++L DE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNTI++MTSNLGS+
Sbjct: 669 ESVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTILIMTSNLGSE 728
Query: 596 KIKEMEKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKN 655
+ GD E + VM+ V+ FRPEF+NRID+II+FR L +++ +I +IQL L+
Sbjct: 729 FLL---AGDVEAARDQVMDVVRSSFRPEFLNRIDEIILFRRLEEQHMGAIVDIQLKRLEK 785
Query: 656 KLLKMNMDLKISKAALKKISNIGFDLIYGAR 686
L M L++ ++A + ++ G+D YGAR
Sbjct: 786 LLADRRMTLELDESARQWLATKGYDPAYGAR 816
>gi|392377944|ref|YP_004985103.1| chaperone [Azospirillum brasilense Sp245]
gi|356879425|emb|CCD00337.1| chaperone [Azospirillum brasilense Sp245]
Length = 874
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/676 (57%), Positives = 526/676 (77%), Gaps = 9/676 (1%)
Query: 12 GKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLI 71
G+ + EE LKKYT DLT AR GKLDPVIGRD+EIRR IQVL RR+KNNPVLI
Sbjct: 148 GRTADTASAEEGYDALKKYTRDLTAVARDGKLDPVIGRDEEIRRTIQVLARRTKNNPVLI 207
Query: 72 GEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKE 131
GEPGVGKTAIVEGLAQRI+ G+VP SL KK+L LD+ LLAG KYRGEFE+RLK +L E
Sbjct: 208 GEPGVGKTAIVEGLAQRIVKGDVPESLKDKKLLALDLGSLLAGAKYRGEFEERLKAVLSE 267
Query: 132 ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 191
+++ ++ +I+FIDELHT++G G EG++DA NMLKP L+RGELHC+GATTL EYR++IEK
Sbjct: 268 VTSGREGVILFIDELHTLVGAGGAEGAMDASNMLKPALARGELHCVGATTLEEYRKHIEK 327
Query: 192 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 251
DAA RRFQ +LV EP +E+TISILRG+++KYEVHHGV ITD AIVAA+ LS+RYI+DRF
Sbjct: 328 DAALARRFQPVLVGEPTVEDTISILRGIKEKYEVHHGVRITDSAIVAAATLSHRYITDRF 387
Query: 252 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 311
+PDKAIDL+DEAA+++++ +DSKPE +D+L+RR++Q+KIE EA+K+E D +S++RL ++
Sbjct: 388 LPDKAIDLMDEAASRLRMAVDSKPEEIDELDRRIVQMKIEREALKKESDPASRERLQRLE 447
Query: 312 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 371
KE+++LE K A L W+ EK + ++ +KE +++ R+++ +A R+ DW +L YG
Sbjct: 448 KELSELEQKSAELTATWRAEKEKLAGARTLKERLDQARIELEQAQRRGDWTRAGELAYGI 507
Query: 372 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 431
L LER LKE + Q +L+ V +E IA +VSR TGIPV K+++ EREKL
Sbjct: 508 LPDLERQLKEAEAQGDQ--------RMLEEAVTAEHIAAVVSRWTGIPVDKMLEGEREKL 559
Query: 432 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 491
L++E L +RV+GQDEAI AVSNA+RR+R+GL D RP GSF+FLGPTGVGKTEL K L+
Sbjct: 560 LHMEGALRQRVIGQDEAIVAVSNAVRRARAGLQDPNRPMGSFLFLGPTGVGKTELTKALA 619
Query: 492 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 551
+F++E +++RIDMSEF+EKHS++RLIGAPPGY+GYEEGG LTE VRR+PY +IL DE+
Sbjct: 620 EFLFDDEHAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGSLTEAVRRRPYQVILFDEV 679
Query: 552 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDKEIIKL 610
EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ + + E D + ++
Sbjct: 680 EKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLATLGEDQDVDTVRA 739
Query: 611 AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAA 670
VM V+ FRPEF+NR+D+I++FR L+R+++ I +IQ L+ L + L++ AA
Sbjct: 740 EVMEAVRAAFRPEFLNRLDEILIFRRLSREDMSGIVDIQFRRLQRLLDDRKLVLEVDDAA 799
Query: 671 LKKISNIGFDLIYGAR 686
+ +++ G+D +YGAR
Sbjct: 800 KRWLADAGYDPVYGAR 815
>gi|365922414|ref|ZP_09446626.1| ATP-dependent chaperone protein ClpB [Cardiobacterium valvarum
F0432]
gi|364573633|gb|EHM51121.1| ATP-dependent chaperone protein ClpB [Cardiobacterium valvarum
F0432]
Length = 754
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/611 (61%), Positives = 505/611 (82%), Gaps = 6/611 (0%)
Query: 11 NGKNILSQQDEEHIGYLKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVL 70
G+ + + E+ LKKYTID+T +A GK+DPVIGRD+EIRRA+Q+LQRR+KNNPVL
Sbjct: 143 GGEPVTDEAAEDKREALKKYTIDVTARAEQGKIDPVIGRDEEIRRAMQILQRRNKNNPVL 202
Query: 71 IGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILK 130
IGEPGVGKTAIVEGLAQRI+NGEVP SL K++L LD+A L+AG+KYRG+FE+RLK +L
Sbjct: 203 IGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRLLSLDLAALMAGSKYRGDFEERLKAVLS 262
Query: 131 EISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIE 190
+I II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EYRQY+E
Sbjct: 263 DIEKANGQIILFIDEIHTMVGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEYRQYME 322
Query: 191 KDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDR 250
KDAA ERRFQK++VEEP +E+TI+ILRGLQ++YEVHHG++ITDPA+VAA+ LS RYI++R
Sbjct: 323 KDAALERRFQKVMVEEPSVEDTIAILRGLQERYEVHHGIDITDPALVAAAVLSNRYITNR 382
Query: 251 FMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLI 310
+PDKAIDLIDEAAA+I++E+DSKPE MD+++RRLIQLK+E A+++E+D++SKKRL +
Sbjct: 383 QLPDKAIDLIDEAAAQIRMELDSKPEAMDRIDRRLIQLKMERLALEKEHDDASKKRLADL 442
Query: 311 KKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYG 370
+ +I KLE +YA+L +IW+ EK + S IKEEI+++R+++ A R+ D T+S+++YG
Sbjct: 443 EDDIQKLEKEYADLNEIWQAEKASNQGSAGIKEEIDRLRIELEVAKRRGDLATMSEIQYG 502
Query: 371 ELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREK 430
++ LE+ L + D + L+++KV EEIA+IVSR TGIPV+K+++ E+EK
Sbjct: 503 KIPALEKQLTAANAAD------STPHQLMRSKVTEEEIAQIVSRWTGIPVAKMLESEKEK 556
Query: 431 LLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTL 490
LL +E+ L RVVGQ A+ AV+NAIRR+R+GLSD RP GSF+FLGPTGVGKTELC+TL
Sbjct: 557 LLALESALSARVVGQQTAVEAVANAIRRNRAGLSDPNRPIGSFLFLGPTGVGKTELCRTL 616
Query: 491 SACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDE 550
+A +F+++E+I+R+DMSE++EKHS++RLIGAPPGY+GY++GGYLTE VRR+PYS++L DE
Sbjct: 617 AAFLFDSDEAIVRLDMSEYMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRRPYSVVLFDE 676
Query: 551 IEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKL 610
IEKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS I+E D E +K+
Sbjct: 677 IEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQEAPNDDYEAMKI 736
Query: 611 AVMNEVKIYFR 621
VM V +FR
Sbjct: 737 KVMEVVAAHFR 747
>gi|90408475|ref|ZP_01216634.1| putative clpB, ATPase with chaperone activity [Psychromonas sp.
CNPT3]
gi|90310407|gb|EAS38533.1| putative clpB, ATPase with chaperone activity [Psychromonas sp.
CNPT3]
Length = 854
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/661 (59%), Positives = 529/661 (80%), Gaps = 7/661 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L K+TIDLTE+A LGKLDPVIGRDDE+RR IQVLQRR+KNNPV+IGEPGVGKTA+VEGLA
Sbjct: 158 LAKFTIDLTERAELGKLDPVIGRDDEVRRMIQVLQRRTKNNPVIIGEPGVGKTALVEGLA 217
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
QRI+NGEVP+ L +K++L LD+ L+AG KYRGEFE+RLK +L E++ + +I+FIDEL
Sbjct: 218 QRIVNGEVPDGLKNKRVLSLDMGALIAGAKYRGEFEERLKDVLNELAKKEGQVILFIDEL 277
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+YIEKDAA ERRFQKI V+E
Sbjct: 278 HTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIQVDE 337
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P+++++I+ILRGL+++YE+HH VEITDPAIVAA LS+RYI+DR +PDKAIDLIDEAA+
Sbjct: 338 PNVQDSIAILRGLKERYELHHKVEITDPAIVAAVTLSHRYIADRRLPDKAIDLIDEAASS 397
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++++DSKPE +DKL R++IQL +E ++++ + D +S +RL ++K + + +Y L++
Sbjct: 398 IRLQLDSKPECLDKLGRKIIQLTVEQKSLQDDTDPASIERLKDLEKSLRQKGKEYKVLDE 457
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+WK EK + +Q IK+E+E+ RL + ATR SD +S+L+YG++ LE+ L +Q +
Sbjct: 458 VWKTEKAALSGTQNIKKELEQRRLDLEVATRASDLSRMSELQYGKIPALEKQLDLATQAE 517
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ TLLK V EIAEI++ TGIPV K++Q EREKLL +E L RVVGQ+
Sbjct: 518 M------TDMTLLKHCVTEHEIAEILAHWTGIPVDKMLQGEREKLLKMEKHLHTRVVGQN 571
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EAI+A++NAIRRSR+GLSD +P GSF+FLGPTGVGKTE CK L+ +F++E++++RIDM
Sbjct: 572 EAINAIANAIRRSRAGLSDPDKPIGSFLFLGPTGVGKTESCKALAHFLFDSEDNMVRIDM 631
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+ILLDEIEKA+ DVFNILLQ+L
Sbjct: 632 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL 691
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVMNEVKIYFRPEFI 625
DDGRLTD +GRT++FRN +I+MTSN+GSD I++ ++ + IK ++ ++ F+PEF+
Sbjct: 692 DDGRLTDGQGRTVDFRNAVIIMTSNIGSDIIQDSFDESSYKDIKQRLLGVLREKFKPEFL 751
Query: 626 NRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGA 685
NRID+ +VF L R+++ SIA IQL+ L+ +L + L S+ ++ + GFD +YGA
Sbjct: 752 NRIDETVVFHPLGRQHLKSIAIIQLHKLQARLKARHYFLTFSEGSVDFMVEAGFDPVYGA 811
Query: 686 R 686
R
Sbjct: 812 R 812
>gi|440730877|ref|ZP_20910938.1| ATP-dependent clp protease subunit protein [Xanthomonas translucens
DAR61454]
gi|440376400|gb|ELQ13074.1| ATP-dependent clp protease subunit protein [Xanthomonas translucens
DAR61454]
Length = 897
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/664 (57%), Positives = 526/664 (79%), Gaps = 10/664 (1%)
Query: 27 LKKYTIDLTEKARLGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLA 86
L ++T +LT++AR ++DPVIGRD EIR+ I +L RR +NNP+L GE GVGKTA+VEGLA
Sbjct: 197 LDQFTTNLTQRARDAQIDPVIGRDGEIRQVIDILMRRRQNNPILTGEAGVGKTAVVEGLA 256
Query: 87 QRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDIIIFIDEL 146
+RI +VP+ L ++ +LD+ LL AG +GEFE+RLK ++ E+ + II+FIDE
Sbjct: 257 RRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENRLKNVIDEVKKSPHPIILFIDEA 316
Query: 147 HTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQKILVEE 206
HTMIG G G DA N+LKP L+RGELHCIGATTL+EYR+YIEKDAA ERRFQK+ V E
Sbjct: 317 HTMIGAGGTAGQNDAANLLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGE 376
Query: 207 PDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLIDEAAAK 266
P +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RYI+DR +PDKAIDL+DEAA++
Sbjct: 377 PTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYIADRQLPDKAIDLMDEAASR 436
Query: 267 IKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIKYANLEK 326
I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++RL ++ +I+KL+ ++++L++
Sbjct: 437 IRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLQREFSDLDE 496
Query: 327 IWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILKEKSQKD 386
+W+ EK ++ + +IKE+IE+ R+++ A R+ D+ +S+++YG L LE+ L +
Sbjct: 497 VWRSEKATLQGATRIKEQIEQARVELEAAQRRQDYAKMSEIQYGLLPNLEKQLAAAGDAE 556
Query: 387 IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCKRVVGQD 446
+ FTL++ +V +EEIAE+VSR TGIPV+++++ ER+KLL +E+ L +RVVGQ
Sbjct: 557 ------HHDFTLVQDRVTAEEIAEVVSRWTGIPVNRMLEGERDKLLRMEDELHRRVVGQQ 610
Query: 447 EAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEESIIRIDM 506
EAI VS+A+RRSR+GLSD RP GSF+FLGPTGVGKTELCK L+ +F++ E++IRIDM
Sbjct: 611 EAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSEAMIRIDM 670
Query: 507 SEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFNILLQIL 566
SEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLILLDE+EKA+SDVFNILLQ+L
Sbjct: 671 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFNILLQVL 730
Query: 567 DDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEI---IKLAVMNEVKIYFRP 622
DDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+ G E +K AVM V+ +FRP
Sbjct: 731 DDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRP 790
Query: 623 EFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLI 682
EF+NR+DDI+VF L++ I SIA IQL L +L + + +++S AL+ + N+GFD +
Sbjct: 791 EFVNRLDDIVVFHPLDKAQIKSIARIQLGGLDKRLAERGLKIELSDRALELLGNVGFDPV 850
Query: 683 YGAR 686
YGAR
Sbjct: 851 YGAR 854
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,172,881,421
Number of Sequences: 23463169
Number of extensions: 607645018
Number of successful extensions: 2564364
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14528
Number of HSP's successfully gapped in prelim test: 13635
Number of HSP's that attempted gapping in prelim test: 2474102
Number of HSP's gapped (non-prelim): 61545
length of query: 951
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 799
effective length of database: 8,792,793,679
effective search space: 7025442149521
effective search space used: 7025442149521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)