BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14505
(1619 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|152980640|ref|YP_001354365.1| DNA gyrase subunit A [Janthinobacterium sp. Marseille]
gi|151280717|gb|ABR89127.1| DNA gyrase subunit A [Janthinobacterium sp. Marseille]
Length = 873
Score = 1300 bits (3365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/859 (71%), Positives = 736/859 (85%), Gaps = 10/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE I I LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNN+WN
Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RPFVKCARVVGETMGKYHPHGD SIYD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RPFVKCARVVGETMGKYHPHGDASIYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL+KI+ ELL DLDKET+DF+ NYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTECRLDKIAGELLADLDKETVDFVPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVIDG L+VL N + ++++LI+IIPAPDFPT GIIYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNITEVIDGALHVLRNADATVDELIEIIPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH EEF +ENR AII+DELPYQVNKKSLLE+I++LV++KKL+ IS++RDESDKSG
Sbjct: 241 VMRAKTHFEEFGKENRAAIIVDELPYQVNKKSLLERIAELVRDKKLDGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQPKLLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE H+LEGL +AL NID+FI II++ TP AK ++ W+ V
Sbjct: 361 VVTRRTIFELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVAKVDLMSRAWDSSVV 420
Query: 421 SKIIGFNKKNYNTISKIN-----NISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + + +N N+ K +Q + +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLA--RTGEEGVGGVNAFRPENLPKHYGIQADGLYKLSDDQAQEILQMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+N+Y+ V++++ DL DIL+ +R+ IITDEL + KN+YG K+ RRS I LNA +
Sbjct: 479 DKIVNEYKEVMEQIADLLDILAKPERVTVIITDELTVAKNEYGIGNKDERRSTIELNATD 538
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI QDMV+TLS+ GY+K+QPISEYRAQKRGGRGK+AM TKD+DWI+QLFIANTH
Sbjct: 539 LGTEDLITPQDMVVTLSHTGYMKAQPISEYRAQKRGGRGKQAMATKDDDWIDQLFIANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GRLYWLKVW++PQGSRNSRGKPI+NMF L++ EKITVILP+S R FP++
Sbjct: 599 DYILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPISGENRTFPED 658
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+Y+FM+TSLG VKKT LS+FSNPRK+GIIAV+L + DFLIGAALTDG +D+MLFSDSGKA
Sbjct: 659 HYIFMATSLGTVKKTSLSDFSNPRKAGIIAVDLDDGDFLIGAALTDGKHDVMLFSDSGKA 718
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR+ARGV GM LE+ Q+VIALLV+ N++QSVLTATENG+GKRT I EYT
Sbjct: 719 VRFDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYT 778
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ EIMLITTGG+LIRTRV+EIR+MGR+TQGV
Sbjct: 779 RHGRGTKGMIAIQTSERNGKVVAATLVDASDEIMLITTGGVLIRTRVAEIREMGRATQGV 838
Query: 833 ILITVENKSKLCGVQRLCK 851
LI VE+ +KL G+QR+ +
Sbjct: 839 TLIAVEDGTKLSGLQRILE 857
>gi|134095749|ref|YP_001100824.1| DNA gyrase subunit A [Herminiimonas arsenicoxydans]
gi|133739652|emb|CAL62703.1| DNA gyrase subunit A [Herminiimonas arsenicoxydans]
Length = 871
Score = 1299 bits (3362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/859 (71%), Positives = 735/859 (85%), Gaps = 10/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE I I LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNN+WN
Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RPFVKCARVVGETMGKYHPHGD SIYD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RPFVKCARVVGETMGKYHPHGDASIYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL+KI+ ELL DLDKET+DF+ NYDGKE+EPSVLPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTECRLDKIAGELLADLDKETVDFVPNYDGKEREPSVLPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVIDG L+VL N E +I++LI+IIPAPDFPT GIIYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNITEVIDGALHVLRNAEATIDELIEIIPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH EE+ +ENR+AII+DELPYQVNKKSLLE+I++LV++KKLE IS++RDESDKSG
Sbjct: 241 VMRAKTHFEEYGKENRSAIIVDELPYQVNKKSLLERIAELVRDKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQPKLLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE H+LEGL +AL NID+FI II++ TP AK ++ W+ V
Sbjct: 361 VVTRRTIFELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVAKVDLMSRAWDSSVV 420
Query: 421 SKIIGFNKKNYNTISKIN-----NISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + + +N N+ K +Q + +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLA--RTGEEGVGGVNAFRPENLPKHYGIQPDGLYKLSDDQAQEILQMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+N+Y+ V+ ++ DL DIL+ +R+ IITDEL + KN+YG K+ RRS I LNA +
Sbjct: 479 DKIVNEYKEVMSQIADLLDILAKPERVTVIITDELTVAKNEYGIGNKDERRSSIELNATD 538
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI QDMV+TLS+ GY+KSQPI+EYRAQKRGGRGK+AM TK++DWI+QLFIANTH
Sbjct: 539 LGTEDLITPQDMVVTLSHTGYMKSQPITEYRAQKRGGRGKQAMATKEDDWIDQLFIANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YWLKVW++PQGSRNSRGKPI+NMF L++ EKITVILP+S R FP++
Sbjct: 599 DYILCFSNRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGENRTFPED 658
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
Y+FMSTSLG VKKT LS+FSNPRK+GIIAV+L + DFLIGAALTDG +D+MLFSDSGKA
Sbjct: 659 RYIFMSTSLGTVKKTSLSDFSNPRKAGIIAVDLDDGDFLIGAALTDGKHDVMLFSDSGKA 718
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR+ARGV GM LE+ Q+VIALLV+ N++QSVLTATENG+GKRT I EYT
Sbjct: 719 VRFDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYT 778
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ EIMLITTGG+LIRTRV+EIR+MGR+TQGV
Sbjct: 779 RHGRGTKGMIAIQTSERNGKVVAATLVDAADEIMLITTGGVLIRTRVAEIREMGRATQGV 838
Query: 833 ILITVENKSKLCGVQRLCK 851
LI VE+ +KL G+QR+ +
Sbjct: 839 TLIAVEDGTKLSGLQRILE 857
>gi|398833820|ref|ZP_10591941.1| DNA gyrase, A subunit [Herbaspirillum sp. YR522]
gi|398220879|gb|EJN07314.1| DNA gyrase, A subunit [Herbaspirillum sp. YR522]
Length = 887
Score = 1299 bits (3361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/857 (71%), Positives = 730/857 (85%), Gaps = 6/857 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE I I LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNN+WN
Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RPFVKCARVVGE MGKYHPHGD SIYD LVRMAQ FSLR TLVDGQGNFGS+DGD AAAM
Sbjct: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSVDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL+KI+NELL D++KET+DF+ NYDGKEKEPSVLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTECRLDKIANELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+ L++L N +C+I++LI++IPAPDFPT GIIYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNITEVINAALHLLANQQCTIDELIELIPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH EEF RE RTAII+DELPYQVNKK+LLE+I++LV++KKLE IS++RDESDKSG
Sbjct: 241 IMRAKTHFEEFGREGRTAIIVDELPYQVNKKALLERIAELVRDKKLEGISDMRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQP+LLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLDCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID+FI IIR+ TP AK++++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPVAKSELMARAWDSSTV 420
Query: 421 SKII---GFNKKNYNTISKINNIS---KLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ G + + N+ +Q + +YKLSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 REMLARTGESSAGGIAAFRPENLPIHYGIQADGLYKLSDEQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+N+Y++V+ ++ DL DILS R+ IITDELN KN+YG K+ RRS I LNA +
Sbjct: 481 IVNEYKDVMAQIADLLDILSKPARVTVIITDELNAAKNEYGIGNKDERRSSIELNATDLG 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QDMV+TLS+ GY+KSQP+SEYRAQKRGGRGK+AM TKD+DWI+QLFIANTHDY
Sbjct: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GRLYWLKVW++PQGSRNSRGKPI+NMF L++ EKITV+LPLS R FP + Y
Sbjct: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVVLPLSGVNRSFPDDRY 660
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TSLG VKKT LS+FSNPRK+GIIAV+L DFLIGAALTDG++D+MLFSDSGKAVR
Sbjct: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGAHDVMLFSDSGKAVR 720
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM L++ Q+VIALLV+ N++QSVLTATENG+GKRT I EYT+H
Sbjct: 721 FDENDVRPMGRTARGVRGMNLDETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T++RNGKVVAATLV EIMLITTGG+LIRTRV+EIR+MGR+TQGV L
Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVEPRDEIMLITTGGVLIRTRVAEIREMGRATQGVTL 840
Query: 835 ITVENKSKLCGVQRLCK 851
I VE +KL G+QR+ +
Sbjct: 841 IAVEGGTKLSGLQRVME 857
>gi|340788938|ref|YP_004754403.1| topoisomerase type IIAa [Collimonas fungivorans Ter331]
gi|340554205|gb|AEK63580.1| topoisomerase type IIAa [Collimonas fungivorans Ter331]
Length = 888
Score = 1297 bits (3356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/857 (71%), Positives = 731/857 (85%), Gaps = 6/857 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE I I LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNN+WN
Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RPFVKCARVVGETMGKYHPHGD SIYD LVRMAQ FSLR LVDGQGNFGSIDGD AAAM
Sbjct: 61 RPFVKCARVVGETMGKYHPHGDASIYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL+KI+ ELL DLDKET+DF+ NYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTECRLDKIAGELLADLDKETVDFVPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L+VL N +C+I++LI+IIPAPDFPTAGIIYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNLTEVIDGALHVLRNADCTIDELIEIIPAPDFPTAGIIYGVSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH EEF RE RTAIIIDELPYQVNKK+LLE+I++LV++KKLE IS+LRDESDKSG
Sbjct: 241 VMRAKTHFEEFGREGRTAIIIDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+ E+VLN LYKQTQLQ+TFGMNM+ALV+GQPKLLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEVAEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID+FI +I++ TP AK++++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIALIKAAPTPPVAKSELMARAWDSSMV 420
Query: 421 SKIIG-FNKKNYNTIS--KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ ++N + + N+ K +Q + MY+LSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 REMLARTGEENLGGVEAFRPENLPKHYGIQADGMYRLSDDQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+N+Y+ V+ ++ DL DIL+ +R+ IITDE+ KN+YG K+ RRS+I N +
Sbjct: 481 IVNEYKEVMAQIADLLDILAKPERVTVIITDEMTAAKNEYGIGNKDERRSQIEHNPTDLG 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QDMV+TLS+ GY+K+QP+SEYRAQKRGGRGK+AM TK++DWI+QLF+ NTHDY
Sbjct: 541 TEDLITPQDMVVTLSHTGYMKAQPVSEYRAQKRGGRGKQAMATKEDDWIDQLFVGNTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GRLYWLK+W++PQGSRNSRGKPI+NMF L++ EKITV+LPLS R FP++ Y
Sbjct: 601 ILCFSNRGRLYWLKIWEVPQGSRNSRGKPIVNMFPLQDGEKITVVLPLSGANRSFPEDRY 660
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFMSTSLG VKKT LS+FSNPRK+GIIAV+L DFLIGAALTDG +D+MLFSDSGKAVR
Sbjct: 661 VFMSTSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDSGKAVR 720
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE+ Q+VIALLV+ N++QSVLTATENG+GKRT I EYT+H
Sbjct: 721 FDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T++RNGKVVAATLV EI+LITTGG+LIRTRV+EIR+MGR+TQGV L
Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVEPSDEIILITTGGVLIRTRVAEIREMGRATQGVTL 840
Query: 835 ITVENKSKLCGVQRLCK 851
I VE+ +KL G+QR+ +
Sbjct: 841 IAVEDGTKLSGLQRVVE 857
>gi|300312989|ref|YP_003777081.1| DNA gyrase subunit A protein [Herbaspirillum seropedicae SmR1]
gi|300075774|gb|ADJ65173.1| DNA gyrase subunit A protein [Herbaspirillum seropedicae SmR1]
Length = 881
Score = 1296 bits (3355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/882 (69%), Positives = 737/882 (83%), Gaps = 12/882 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE I I LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHEMNN+WN
Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RPFVKCARVVGE MGKYHPHGD SIYD LVRMAQ FSLR TLVDGQGNFGSIDGD AAAM
Sbjct: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL+KISNELL D++KET+DF+ NYDGKEKEPSVLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L++L N +C+I++LI+++PAPDFPT GIIYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH EE+ RE R AII+DELPYQVNKK+LLE+I++LV++KKLE IS+LRDESDKSG
Sbjct: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQP+LLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420
Query: 421 SKIIG-FNKKNYNTISKINNIS-----KLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + N I S +Q++ +YKLSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+N+Y++V+ ++ DL DIL+ R+ IITDELN KN +G K+ RRS I NA + +
Sbjct: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QDMV+TLS+ GY+KSQP+SEYRAQKRGGRGK+AM TKD+DWI+QLFIANTHDY
Sbjct: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GRLYWLKVW++PQGSRNSRGKPI+NMF L++ EKITVILP+S R FP + Y
Sbjct: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TSLG VKKT LS+FSNPRK+GIIAV+L DFLIGAALTDG +D+MLFSD GKAVR
Sbjct: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE+ Q+VIALLV+ N++QSVLTATENG+GKRT I EYT+H
Sbjct: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T++RNGKVVAATLV+ EIMLITTGG+LIRTRVSEIR+MGR+TQGV L
Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840
Query: 835 ITVENKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
I VE+ +KL G+QR+ + + ++G A G G+ A
Sbjct: 841 IAVEDGTKLSGLQRVVESDVED------AVEGDNAEGAGSEA 876
>gi|409407455|ref|ZP_11255906.1| DNA gyrase subunit A protein [Herbaspirillum sp. GW103]
gi|386433206|gb|EIJ46032.1| DNA gyrase subunit A protein [Herbaspirillum sp. GW103]
Length = 881
Score = 1296 bits (3353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/857 (71%), Positives = 728/857 (84%), Gaps = 6/857 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE I I LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHEMNN+WN
Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RPFVKCARVVGE MGKYHPHGD SIYD LVRMAQ FSLR TLVDGQGNFGSIDGD AAAM
Sbjct: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL+KISNELL D++KET+DF+ NYDGKEKEPSVLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L++L N C+I++LI+++PAPDFPT GIIYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNITEVINGALHLLANEHCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH EE+ RE R AII+DELPYQVNKK+LLE+I++LV++KKLE IS+LRDESDKSG
Sbjct: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQP+LLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMNRAWDSSMV 420
Query: 421 SKIIG-FNKKNYNTISKINNIS-----KLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + N I S +Q++ +YKLSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 REMLARTGEGNPGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+N+Y++V+ ++ DL DILS R+ IITDELN +N YG K+ RRS I NA + +
Sbjct: 481 IVNEYKDVMAQIADLLDILSKPARVTAIITDELNAARNDYGIGSKDERRSTIEHNATDLA 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QDMV+TLS+ GY+KSQP+SEYRAQKRGGRGK+AM TKD+DWI+QLFIANTHDY
Sbjct: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GRLYWLKVW++PQGSRNSRGKPI+NMF L++ EKITVILP+S R FP + Y
Sbjct: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TSLG VKKT LS+FSNPRK+GIIAV+L DFLIGAALTDG++D+MLFSD GKAVR
Sbjct: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGAHDVMLFSDGGKAVR 720
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE+ Q+VIALLV+ N++QSVLTATENG+GKRT I EYT+H
Sbjct: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T++RNGKVVAATLV+ EIMLITTGG+LIRTRVSEIR+MGR+TQGV L
Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840
Query: 835 ITVENKSKLCGVQRLCK 851
I VE+ +KL G+QR+ +
Sbjct: 841 IAVEDGTKLSGLQRVVE 857
>gi|399017566|ref|ZP_10719757.1| DNA gyrase, A subunit [Herbaspirillum sp. CF444]
gi|398103164|gb|EJL93337.1| DNA gyrase, A subunit [Herbaspirillum sp. CF444]
Length = 891
Score = 1296 bits (3353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/857 (71%), Positives = 725/857 (84%), Gaps = 6/857 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE I I LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNN+WN
Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RPFVKCARVVGE MGKYHPHGD SIYD LVRMAQ FSLR LVDGQGNFGSIDGD AAAM
Sbjct: 61 RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYMLVDGQGNFGSIDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL+KI+NELL D++KET+DF NYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTECRLDKIANELLADIEKETVDFDPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L+VL N C++++LI++IPAPDFPT GIIYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNITEVINGALHVLSNANCTVDELIELIPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH EEF RE RTAII+DELPYQVNKK+LLE+I++LV++KKL+ IS+LRDESDKSG
Sbjct: 241 VMRAKTHFEEFGREGRTAIIVDELPYQVNKKALLERIAELVRDKKLDGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV+ QPKLLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDRQPKLLNLKQMLECFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTIFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPVAKTELMARAWDSSMV 420
Query: 421 SKIIGF----NKKNYNTISKINNISK--LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ N N N + +QN+ +YKLSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 REMLARTGAENTGGINAFRPENLPTHYGIQNDGLYKLSDDQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+N+Y+ V++++ DL DILS R+ IITDELN KN +G K+ RRS I LNA +
Sbjct: 481 IVNEYKEVMEQIADLLDILSKPARVTAIITDELNAAKNDFGIGAKDERRSTIELNATDLG 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QD+V+TLS+ GY+KSQP+SEYRAQKRGGRGK+AM TKD+DWI+QLFIANTHDY
Sbjct: 541 TEDLITPQDLVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GR+YWLKVW++PQGSRNSRGKPI+NMF L++ EKITVILP+S R FP++ Y
Sbjct: 601 ILCFSNRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGENRTFPEDRY 660
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFMSTSLG VKKT LS+FSNPRK+GIIAV+L DFLIGAALTDG +D+MLFSDSGKAVR
Sbjct: 661 VFMSTSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDSGKAVR 720
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE Q+VIALLV+ N++QSVLTATENG+GKRT I EYT+H
Sbjct: 721 FDENDVRPMGRTARGVRGMNLEDGQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T++RNGKVVAATLV EIMLITTGG+LIRTRV+EIR+MGR+TQGV L
Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVEASDEIMLITTGGVLIRTRVAEIREMGRATQGVTL 840
Query: 835 ITVENKSKLCGVQRLCK 851
I VE+ +KL G+QR+ +
Sbjct: 841 IAVEDGTKLSGLQRVVE 857
>gi|329900831|ref|ZP_08272599.1| DNA gyrase subunit A [Oxalobacteraceae bacterium IMCC9480]
gi|327549359|gb|EGF33929.1| DNA gyrase subunit A [Oxalobacteraceae bacterium IMCC9480]
Length = 884
Score = 1282 bits (3318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/876 (69%), Positives = 737/876 (84%), Gaps = 10/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE I I LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNN+WN
Sbjct: 1 MDQFAKETIPISLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+VKCARVVGE MGKYHPHGD SIYD LVRMAQ FSLR TLVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYVKCARVVGEVMGKYHPHGDQSIYDTLVRMAQDFSLRYTLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL+KI+NE+L D+DK+T+DF+ NYDGKEKEP+VLPTRIPNLLING+SGIAVGMAT
Sbjct: 121 RYTECRLDKIANEILADIDKDTVDFVPNYDGKEKEPTVLPTRIPNLLINGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVIDG L+VL N +C+I++LI+IIPAPDFPTAGIIYG+S V DGY TG+GR+
Sbjct: 181 NIPPHNITEVIDGALHVLRNADCTIDELIEIIPAPDFPTAGIIYGVSGVRDGYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH EE+ +E+RTAII+DELPYQVNKKSLLE+I++LV++KKL+ IS++RDESDKSG
Sbjct: 241 VMRAKTHFEEYGKESRTAIIVDELPYQVNKKSLLERIAELVRDKKLDGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQPKLLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRAEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELR+ARE H+LEGL +AL NID+FI II++ TP AK +++ W+ V
Sbjct: 361 VVTRRTIFELRRARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKVELMARAWDSSVV 420
Query: 421 SKIIGFNKKNYNTISKIN-----NISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + + IN N+ K +Q + +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REML--VRTGEEALGGINAFRPENLPKHYGIQPDGLYKLSDDQAQEILQMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+N+Y+ V+ ++ DL DILS +R+ II DEL K +YG K+ RRS I NA +
Sbjct: 479 DKIVNEYKEVMAQIADLLDILSKPERVTIIIVDELTAAKMEYGIGNKDERRSYIEHNATD 538
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI QDMV+TLS+ GY+KSQPISEYR+QKRGGRGK+AM TKD+DWI+QLFIANTH
Sbjct: 539 LGTEDLITPQDMVVTLSHTGYMKSQPISEYRSQKRGGRGKQAMATKDDDWIDQLFIANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GRLYWLKVW++PQGSRNSRGKPI+NMF L + EK+TVILP+S + R FP++
Sbjct: 599 DYILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLLDGEKVTVILPVSGDNRSFPED 658
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
Y+FMSTSLG VKKT LS+FSNPRK+GIIAV+L DFLIGAALTDG +D+MLFSDSGKA
Sbjct: 659 RYIFMSTSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDSGKA 718
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR+ARGV GM LE+ Q+VIALLV+ N++QSVLTATENGYGKRT I EYT
Sbjct: 719 VRFDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGYGKRTPITEYT 778
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNG+VVAATLV EIMLITTGG+LIRTRV+EIR+MGR+TQGV
Sbjct: 779 RHGRGTKGMIAIQTSERNGRVVAATLVEPSDEIMLITTGGVLIRTRVAEIREMGRATQGV 838
Query: 833 ILITVENKSKLCGVQRLCKITMIKKYIPVITIDGPT 868
LI VE+ +KL G+QR+ + + + V D P
Sbjct: 839 TLIAVEDGTKLSGLQRIVEPDVEEGDDAVDATDAPA 874
>gi|445495472|ref|ZP_21462516.1| DNA gyrase subunit A [Janthinobacterium sp. HH01]
gi|444791633|gb|ELX13180.1| DNA gyrase subunit A [Janthinobacterium sp. HH01]
Length = 881
Score = 1277 bits (3305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/860 (69%), Positives = 728/860 (84%), Gaps = 10/860 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE I I LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNN+WN
Sbjct: 1 MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+VKCARVVGETMGKYHPHGD SIYD LVRMAQ FSLR LVDGQGNFGS+DGD AAAM
Sbjct: 61 RPYVKCARVVGETMGKYHPHGDASIYDTLVRMAQDFSLRYMLVDGQGNFGSVDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL+KIS ELL D+DKET+DF NYDGKEKEP+VLPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTECRLDKISAELLADIDKETVDFQPNYDGKEKEPTVLPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G L+VL NP+CSI++LI++IPAPDFPT G IYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNLHEVIAGALHVLRNPQCSIDELIELIPAPDFPTGGTIYGVSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
++RAKTH EE+ ++ RTAII+DELPYQVNKKSLLE+I++ V++KKLE IS++RDESDKS
Sbjct: 241 VMRAKTHYEEYGKDGGRTAIIVDELPYQVNKKSLLERIAENVRDKKLEGISDIRDESDKS 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQP+LLNLKE+L F+ HR+
Sbjct: 301 GMRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKEMLQCFLSHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE H+LEGL +AL NID+FI +I++ TP AK +++ +W+
Sbjct: 361 EVVTRRTVFELRKARERGHVLEGLAVALANIDDFIALIKTAPTPPVAKTALMDRSWDSSL 420
Query: 420 VSKIIGFNKKNYNTISKINNISK--------LQNNDMYKLSDIQAQEILKMPLQRLTNME 471
V +++ + +T+ I +Q + MY+LSD QAQEIL+M LQRLT +E
Sbjct: 421 VREMLARTSEG-STVGGIEAFRPEHLPKHYGIQPDGMYRLSDDQAQEILQMRLQRLTGLE 479
Query: 472 QKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI 531
Q KI+N+Y++V+ ++ DL DIL+ +R+ IITDE+ + N++G +K+ RRS I NA
Sbjct: 480 QDKIVNEYKDVMAEIADLLDILAKPERVTTIITDEMTHVVNEFGDPQKDPRRSNIEHNAT 539
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
+ TEDLI QDMV+TLS+ GY+K+QPISEYR+QKRGGRGK+AM TK+EDWI+QLFIANT
Sbjct: 540 DLGTEDLITPQDMVVTLSHTGYMKAQPISEYRSQKRGGRGKQAMATKEEDWIDQLFIANT 599
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HDYILCFSN GR+YWLKVW++PQGSRNSRGKPI+NMF L + EKITVILPLS + R FP+
Sbjct: 600 HDYILCFSNRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLADNEKITVILPLSGDNRTFPE 659
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
++YVFMSTSLG VKKT L +FSNPRK+GIIAV+L DFLIGAALTDG +D+MLFSD+GK
Sbjct: 660 DHYVFMSTSLGTVKKTPLKDFSNPRKAGIIAVDLDEGDFLIGAALTDGEHDVMLFSDAGK 719
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
AVRF+EN VR MGR+ARGV GM L++ Q+VIALLV+ N++QSVLTATENG+GKRT I EY
Sbjct: 720 AVRFDENDVRPMGRNARGVRGMNLDEGQRVIALLVAENEQQSVLTATENGFGKRTPITEY 779
Query: 772 TKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQG 831
T+H RGTKG+I+I+T++RNGKVVAATLV+ EIMLITTGG+LIRTRV+EIR+MGR+TQG
Sbjct: 780 TRHGRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVAEIREMGRATQG 839
Query: 832 VILITVENKSKLCGVQRLCK 851
V LI VE+ +KL G+QR+ +
Sbjct: 840 VTLIAVEDGTKLSGLQRVVE 859
>gi|415941470|ref|ZP_11555771.1| DNA gyrase subunit A [Herbaspirillum frisingense GSF30]
gi|407759025|gb|EKF68776.1| DNA gyrase subunit A [Herbaspirillum frisingense GSF30]
Length = 865
Score = 1277 bits (3304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/864 (69%), Positives = 723/864 (83%), Gaps = 12/864 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHEMNN+WNRPFVKCARVVGE MGK
Sbjct: 1 MRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWNRPFVKCARVVGEVMGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD SIYD LVRMAQ FSLR TLVDGQGNFGSIDGD AAAMRYTECRL+KISNELL
Sbjct: 61 YHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAMRYTECRLDKISNELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D++KET+DF+ NYDGKEKEPSVLPTRIPNLL+NGSSGIAVGMATNIPPHN+TEVI+G L+
Sbjct: 121 DIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMATNIPPHNITEVINGALH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L N C+I++LI+++PAPDFPT GIIYG+S V DGY TG+GRV++RAKTH EE+ RE R
Sbjct: 181 LLANEHCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRVVMRAKTHFEEYGREGR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNKK+LLE+I++LV++KKLE IS+LRDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 IAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYKQTQLQ+TFGMNM+ALV+GQP+LLNLK++L F+ HR+EV+ RRT+FELRKARE
Sbjct: 301 LNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRREVVTRRTVFELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG-FNKKNYNTIS 435
H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V +++ + N I
Sbjct: 361 GHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMVREMLARAGEANEGGIE 420
Query: 436 KINNIS-----KLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLT 490
S +Q++ MYKLSD QAQEIL+M LQRLT +EQ KI+N+Y+ V+ ++ DL
Sbjct: 421 AFRPESLPAHYGIQSDGMYKLSDDQAQEILQMRLQRLTGLEQDKIVNEYKEVMAQIADLL 480
Query: 491 DILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSN 550
DILS R+ IITDELN +N YG K+ RRS I NA + +TEDLI QDMV+TLS+
Sbjct: 481 DILSKPARVTAIITDELNAARNDYGIGAKDERRSTIEHNATDLATEDLITPQDMVVTLSH 540
Query: 551 LGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVW 610
GY+KSQP+SEYRAQKRGGRGK+AM TKD+DWI+QLFIANTHDYILCFSN GRLYWLKVW
Sbjct: 541 TGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDYILCFSNRGRLYWLKVW 600
Query: 611 QIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLS 670
++PQGSRNSRGKPI+NMF L++ EKITVILP+S R FP + YVFM+TSLG VKKT LS
Sbjct: 601 EVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRYVFMATSLGTVKKTPLS 660
Query: 671 NFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGV 730
+FSNPRK+GIIAV+L DFLIGAALTDG++D+MLFSD+GKAVRF+EN VR MGR+ARGV
Sbjct: 661 DFSNPRKAGIIAVDLDEGDFLIGAALTDGAHDVMLFSDAGKAVRFDENDVRPMGRTARGV 720
Query: 731 IGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRN 790
GM LE+ Q+VIALLV+ N++QSVLTATENG+GKRT I EYT+H RGTKG+I+I+T++RN
Sbjct: 721 RGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRHGRGTKGMIAIQTSERN 780
Query: 791 GKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
GKVVAATLV+ EIMLITTGG+LIRTRVSEIR+MGR+TQGV LI VE+ +KL G+QR+
Sbjct: 781 GKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTLIAVEDGTKLSGLQRVV 840
Query: 851 KITMIKKYIPVITIDGPTASGKGT 874
+ + +DG A G G+
Sbjct: 841 ESDVED------VMDGENAEGAGS 858
>gi|237747594|ref|ZP_04578074.1| DNA gyrase subunit A [Oxalobacter formigenes OXCC13]
gi|229378956|gb|EEO29047.1| DNA gyrase subunit A [Oxalobacter formigenes OXCC13]
Length = 877
Score = 1270 bits (3287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/857 (69%), Positives = 720/857 (84%), Gaps = 6/857 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE ISI LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLF MHEMNN WN
Sbjct: 1 MDQFAKETISISLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFGMHEMNNAWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+VKCARVVGE MGKYHPHGD SIYD LVRMAQ FSLR TLVDGQGNFGSIDGD+AAAM
Sbjct: 61 RPYVKCARVVGEVMGKYHPHGDQSIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL++IS E+L D+DKETIDF+ NYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTECRLDRISEEMLADIDKETIDFVPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L +LH P+C+I++LI IIPAPDFPT GIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLVEVINGALQLLHQPDCTIDELIDIIPAPDFPTGGIIYGVSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH EE+ RE R AII+DELPYQVNKK+LLE+I++ V+EKKL+ IS++RDESDKSG
Sbjct: 241 VMRAKTHFEEYGREGRQAIIVDELPYQVNKKNLLERIAESVREKKLDGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN L+KQTQLQ+TFGMNM+ALV+GQPKLLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLFKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL +AL NID+FI IIR+ TP A+ +++ +WN V
Sbjct: 361 VVTRRTIFELRKARERGHILEGLAVALANIDDFIAIIRAAPTPPIARQELMSRSWNSSLV 420
Query: 421 SKII---GFNKKNYNTISKINNISKL---QNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
++ G + N + + K+ Q++ +YKLS+ QA EIL+M LQRLT +EQ K
Sbjct: 421 KSMLERTGADHANSVDDFRPEGLPKMFGIQSDGLYKLSEEQATEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+N+Y +V+ ++ +L DIL+ +R++ II DEL + +YG K++RRSEI LNA +
Sbjct: 481 ILNEYGDVMAQIAELLDILAKPERVLAIIDDELKQVIGEYGEKAKDVRRSEIELNASDLE 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QDMV+TLS+ GY KSQP+SEYRAQKRGGRG+ A TK++DW++QLFIANTHDY
Sbjct: 541 TEDLITPQDMVVTLSHTGYFKSQPLSEYRAQKRGGRGRMATATKEDDWVDQLFIANTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFS+ GR+YWLKVW++PQGSRNSRGKPI+NMF L+ EKITVILPLS R+FP N+Y
Sbjct: 601 ILCFSDRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQGDEKITVILPLSGENRNFPDNHY 660
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
+FM+TS G VKKT L++FSNPRK+GIIAV L D+LIGAALTDG +D+MLFSD+GKAVR
Sbjct: 661 IFMATSQGTVKKTSLTDFSNPRKAGIIAVGLDEGDYLIGAALTDGKHDVMLFSDAGKAVR 720
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE QKVIA+LV+ ++ QSVLTATENG+GKRT I EYT+H
Sbjct: 721 FDENDVRPMGRTARGVRGMNLEDDQKVIAMLVAGDESQSVLTATENGFGKRTPIAEYTRH 780
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T++RNGKVVAATLVN EIMLITTGG+LIRTRVSE+R+MGR+TQGV L
Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVNENDEIMLITTGGVLIRTRVSEVREMGRATQGVTL 840
Query: 835 ITVENKSKLCGVQRLCK 851
I VE + L G+QR+ +
Sbjct: 841 IAVEEGTTLSGLQRILE 857
>gi|395761268|ref|ZP_10441937.1| DNA gyrase subunit A [Janthinobacterium lividum PAMC 25724]
Length = 883
Score = 1267 bits (3279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/843 (70%), Positives = 719/843 (85%), Gaps = 8/843 (0%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHEMNN+WNRP+VKCARVVGETMGK
Sbjct: 1 MRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHEMNNVWNRPYVKCARVVGETMGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD SIYD LVRMAQ FSLR LVDGQGNFGS+DGD AAAMRYTECRL+KI++ELL
Sbjct: 61 YHPHGDASIYDTLVRMAQDFSLRYMLVDGQGNFGSVDGDGAAAMRYTECRLDKIASELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DK+T+DF NYDGKEKEP+VLPTRIPNLLINGSSGIAVGMATNIPPHN+TEVIDG L+
Sbjct: 121 DIDKDTVDFQPNYDGKEKEPTVLPTRIPNLLINGSSGIAVGMATNIPPHNITEVIDGALH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNREN- 255
VL NPEC+I++LI+IIPAPDFPTAGIIYG+S V DGY TG+GRV++RAKTH EE+ ++
Sbjct: 181 VLRNPECTIDELIEIIPAPDFPTAGIIYGVSGVRDGYRTGRGRVVMRAKTHFEEYGKDGG 240
Query: 256 RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEI 315
R AII+DELP+QVNKKSLLE+I++ V++KKL+ IS++RDESDKSGMR+VIELKR E+PE+
Sbjct: 241 RIAIIVDELPFQVNKKSLLERIAENVRDKKLDGISDIRDESDKSGMRVVIELKRGEVPEV 300
Query: 316 VLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKARE 375
VLN LYKQTQLQ+TFGMNM+ALV+GQPKLLNLK++L F+ HR+EV+ RRT+FELRKARE
Sbjct: 301 VLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLQCFLSHRREVVTRRTVFELRKARE 360
Query: 376 YAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNT-- 433
H+LEGL +AL NID+FI II++ TP AK +++ W+ V +++
Sbjct: 361 RGHVLEGLAVALANIDDFIAIIKAAPTPPIAKVELMAKAWDSSVVREMLARTGDGTTPGG 420
Query: 434 --ISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
+ N+ K +Q + +YKLSD QAQEIL+M LQRLT +EQ KI+N+Y++V++ + D
Sbjct: 421 IDAYRPENLPKHYGMQADGLYKLSDDQAQEILQMRLQRLTGLEQDKIVNEYKDVMEHIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +R+ IITDE+ KN+YG+ K++RRS+I LNA + TEDLI QDMV+TL
Sbjct: 481 LLDILAKPERVTVIITDEMTAAKNEYGAGNKDVRRSQIELNATDLETEDLITPQDMVVTL 540
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+K+QPISEYRAQKRGGRGK+AM TK+EDWI+QLFIANTHDYILCFS+ GR+YWLK
Sbjct: 541 SHTGYMKAQPISEYRAQKRGGRGKQAMATKEEDWIDQLFIANTHDYILCFSDRGRMYWLK 600
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
VW++PQGSRNSRGKPI+NMF L++ EKITVILPLS R FP+++YVFMSTSLG VKKT
Sbjct: 601 VWEVPQGSRNSRGKPIVNMFPLQDNEKITVILPLSGENRTFPEDHYVFMSTSLGTVKKTP 660
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L +FSNPRK+GIIAV+L + DFLIGAALTDG +D+MLFSDSGKAVRF+EN VR MGR+AR
Sbjct: 661 LKDFSNPRKAGIIAVDLDDGDFLIGAALTDGQHDVMLFSDSGKAVRFDENDVRPMGRTAR 720
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM LE+ Q VIALLV+ N++QSVLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 721 GVRGMNLEEGQHVIALLVAENEQQSVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSE 780
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNG+VVAATLVN EIMLITTGG+LIRTRVSEIR+MGR+TQGV LI VE+ +KL G+QR
Sbjct: 781 RNGRVVAATLVNTSDEIMLITTGGVLIRTRVSEIREMGRATQGVTLIAVEDGTKLSGLQR 840
Query: 849 LCK 851
+ +
Sbjct: 841 VVE 843
>gi|427403187|ref|ZP_18894184.1| DNA gyrase, A subunit [Massilia timonae CCUG 45783]
gi|425717923|gb|EKU80877.1| DNA gyrase, A subunit [Massilia timonae CCUG 45783]
Length = 871
Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/866 (68%), Positives = 726/866 (83%), Gaps = 17/866 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHEMNN+WN
Sbjct: 1 MDQFAKETVPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP++KCARVVG+TMGK+HPHGD SIYD LVRMAQ FSLR TLVDGQGNFGSIDGDSAAAM
Sbjct: 61 RPYLKCARVVGDTMGKFHPHGDSSIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL++IS E+L D+DK+T+DF NYDGKEKEP+VLPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTECRLDRISGEILADIDKDTVDFQPNYDGKEKEPTVLPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G ++VL NP+C+I++LI++IPAPDFPTAGIIYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNLSEVINGAMHVLRNPDCTIDELIELIPAPDFPTAGIIYGVSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRE-NRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
++RAKTH EE R+ +RTAIIIDELPYQVNKKSLLE+I++ V++KKLE IS++RDESDKS
Sbjct: 241 VMRAKTHFEEVGRDGSRTAIIIDELPYQVNKKSLLERIAENVRDKKLEGISDIRDESDKS 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALVNGQPKLLNLK++L F+ HR+
Sbjct: 301 GMRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVNGQPKLLNLKQMLECFLSHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKAR+ H+LEGL +AL NID+FI II++ TP AK ++++ W+
Sbjct: 361 EVVTRRTVFELRKARDRGHMLEGLAVALANIDDFIAIIKAAPTPPVAKVELMDRAWDSSL 420
Query: 420 VSKIIGFNKKNYNTISKINNISK-----------LQNNDMYKLSDIQAQEILKMPLQRLT 468
V +++ N + + I+ +Q N +YKLSD QAQEIL+M LQRLT
Sbjct: 421 VREML-----NRTELGESGGIAAFRPEHLPKHYGMQQNGLYKLSDEQAQEILQMRLQRLT 475
Query: 469 NMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIIL 528
+EQ KI+N+Y+ V+ + DL DIL+ +R+ II DE+ IK +Y + K+ RRS I
Sbjct: 476 GLEQDKIVNEYKEVMAHIADLLDILAKPERVTTIIVDEMTAIKAEYADNGKDTRRSTIEH 535
Query: 529 NAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFI 588
NA + TEDLI QDMV+TLS+ GY+K+QPISEYRAQKRGGRGK+A TKDEDWI+QLFI
Sbjct: 536 NASDLETEDLITPQDMVVTLSHAGYMKAQPISEYRAQKRGGRGKQATATKDEDWIDQLFI 595
Query: 589 ANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRD 648
ANTHDY+LCFSN GR+YWLKVW++PQGSRNSRGKPI+NMF L++ EKITV+LPL R
Sbjct: 596 ANTHDYMLCFSNRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQDNEKITVVLPLQGENRT 655
Query: 649 FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSD 708
FP+++YVFMSTSLG VKKT L +FSNPRK+GIIAV+L D L+GAALTDG +D+MLFSD
Sbjct: 656 FPEDHYVFMSTSLGTVKKTPLRDFSNPRKAGIIAVDLDEGDVLVGAALTDGKHDVMLFSD 715
Query: 709 SGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLI 768
GKAVRF+EN VR MGR+ARGV GM LE+ Q+VIALLV+ +++Q+VLTATENG+GKRT I
Sbjct: 716 GGKAVRFDENDVRPMGRTARGVRGMNLEEGQQVIALLVAESEEQTVLTATENGFGKRTPI 775
Query: 769 KEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRS 828
EYT+H RGTKG+I+I+T++RNGKVVAATLV EIMLITTGG+LIRTRVSEIR+MGR+
Sbjct: 776 TEYTRHGRGTKGMIAIQTSERNGKVVAATLVEPSDEIMLITTGGVLIRTRVSEIREMGRA 835
Query: 829 TQGVILITVENKSKLCGVQRLCKITM 854
TQGV LI VE+ +KL G+QR+ + +
Sbjct: 836 TQGVTLIAVEDGTKLSGLQRIVETDL 861
>gi|237747506|ref|ZP_04577986.1| DNA gyrase subunit A [Oxalobacter formigenes HOxBLS]
gi|229378857|gb|EEO28948.1| DNA gyrase subunit A [Oxalobacter formigenes HOxBLS]
Length = 872
Score = 1258 bits (3255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/857 (68%), Positives = 727/857 (84%), Gaps = 6/857 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE ISI LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLF MHEMNN WN
Sbjct: 1 MDQFAKETISISLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFGMHEMNNTWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+VKCARVVGE MGKYHPHGD SIYD LVRMAQ FSLR TLVDGQGNFGSIDGD+AAAM
Sbjct: 61 RPYVKCARVVGEVMGKYHPHGDQSIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECRL+KI++E+L D+DKETIDF+ NYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTECRLDKIADEMLADIDKETIDFVPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G L++LH+P+C+I++LI IIPAPDFPT G+IYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLAEVIRGSLHLLHHPDCTIDELIDIIPAPDFPTGGLIYGVTGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH EE R+ R AIIIDELPYQVNKK+LLE+I++ V+EKKL+ IS++RDESDKSG
Sbjct: 241 VMRARTHFEEHGRDGRQAIIIDELPYQVNKKTLLERIAESVREKKLDGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+ E+VLN L+KQTQLQ+TFGMNM+ALV+GQPKLLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRNEVAEVVLNNLFKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE H+LEGL +AL NID+FI IIR+ TP A+ +++ +W+ V
Sbjct: 361 VVTRRTIFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIARQELMARSWDSSLV 420
Query: 421 SKIIG-FNKKNYNTISK-----INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
++ ++ N++ + I +Q++ +YKLS+ QA EIL+M LQRLT +EQ +
Sbjct: 421 RSMLERTGNEHTNSVDDFRPEGLPKIYGIQSDGLYKLSEEQATEILQMRLQRLTGLEQDR 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+N+Y +V++++ +L DIL+ +R++EII EL + +Y K+ RRSEI LNA +
Sbjct: 481 ILNEYGDVMRQIAELLDILARPERVLEIIDTELTAVIGEYAEKAKDTRRSEIELNASDLE 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QDMV+TLS+ GYIKSQP+SEYRAQKRGGRG++A TK++DW++QLFIANTHDY
Sbjct: 541 TEDLITPQDMVVTLSHSGYIKSQPLSEYRAQKRGGRGRQATSTKEDDWVDQLFIANTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFS+ GR+YWLKVW++PQGSRNSRGKPI+NMF L+ +EKITVILPLS R+FP+N+Y
Sbjct: 601 ILCFSDRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQGEEKITVILPLSGENRNFPENHY 660
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
+FM+TS G VKKT L++FSNPRK+GIIAV L D+LIGAALTDG++D+MLFSD+GKAVR
Sbjct: 661 IFMATSQGTVKKTPLTDFSNPRKAGIIAVGLDEGDYLIGAALTDGNHDVMLFSDAGKAVR 720
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE +QKVIALLV+ ++ QSVLTATENG+GKRT I EYT+H
Sbjct: 721 FDENDVRPMGRTARGVKGMNLEDEQKVIALLVAGDENQSVLTATENGFGKRTPIAEYTRH 780
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T++RNGKVVAATLV+ EIMLITTGG+LIRTRVSEIR+MGR+TQGV L
Sbjct: 781 GRGTKGMIAIQTSERNGKVVAATLVSENDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840
Query: 835 ITVENKSKLCGVQRLCK 851
I++E + L G+QR+ +
Sbjct: 841 ISIEEGTTLSGLQRILE 857
>gi|319762552|ref|YP_004126489.1| DNA gyrase, a subunit [Alicycliphilus denitrificans BC]
gi|330824569|ref|YP_004387872.1| DNA gyrase subunit A [Alicycliphilus denitrificans K601]
gi|317117113|gb|ADU99601.1| DNA gyrase, A subunit [Alicycliphilus denitrificans BC]
gi|329309941|gb|AEB84356.1| DNA gyrase, A subunit [Alicycliphilus denitrificans K601]
Length = 896
Score = 1188 bits (3073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/858 (64%), Positives = 699/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 18 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 77
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 78 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM 137
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+R+PNLL+NGS+GIAVGMAT
Sbjct: 138 RYTEIRLAKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPSRLPNLLVNGSAGIAVGMAT 197
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NPE SI++L++IIPAPDFPTAGIIYG+ V DGY TG+G+V
Sbjct: 198 NIPPHNLNEVVDACLHLLRNPESSIDELMEIIPAPDFPTAGIIYGIQGVKDGYRTGRGKV 257
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKKLE IS+++DESDKSG
Sbjct: 258 VMRAKVHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKLEGISHIQDESDKSG 317
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQPKL NLKE++ F+ HR+E
Sbjct: 318 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLCNLKELIEVFLQHRRE 377
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI+IIR + TP AK +++ +W+ V
Sbjct: 378 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMARSWDSQLV 437
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ +++ ++ + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 438 REMLTRTREDGGVVNADDYRPEGLEREFGMQESGLYRLSDTQAQEILQMRLQRLTGLEQD 497
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ + +L DIL+ R+ II +EL+ ++ ++G + RRS I +A +
Sbjct: 498 KIVAEYKDVMAVIENLLDILAKPARVSTIIGEELSALRQEFGQTRLGARRSTIEHSAQDL 557
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 558 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD 617
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSRNSRG+PI+NMF L+ EKI V+LPL+ R FP +
Sbjct: 618 YILCFSNRGRLYWLKVWEVPAGSRNSRGRPIVNMFPLQEGEKINVVLPLTGEMRSFPADR 677
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L FSNPRK+GIIAV L D+LIGAALTDG +D+MLFSDSGKAV
Sbjct: 678 YVFMATSMGTVKKTALDEFSNPRKAGIIAVGLDEGDYLIGAALTDGEHDVMLFSDSGKAV 737
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM+LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 738 RFDENDVRPMGRNARGVKGMQLEDGQSVIAMLVAEDENQSVLTATENGYGKRTSITEYTR 797
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNG+VVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 798 HGRGTKGMIAIQQSERNGRVVAATLVHADDEIMLITDTGVLVRTRVSEIRELGRATQGVT 857
Query: 834 LITVENKSKLCGVQRLCK 851
LI+++ +KL G+QR+ +
Sbjct: 858 LISLDEGAKLSGLQRIVE 875
>gi|393776130|ref|ZP_10364427.1| DNA gyrase subunit A [Ralstonia sp. PBA]
gi|392717073|gb|EIZ04650.1| DNA gyrase subunit A [Ralstonia sp. PBA]
Length = 885
Score = 1186 bits (3067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/866 (64%), Positives = 704/866 (81%), Gaps = 23/866 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++Y +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYATIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG E EP VLPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLADIDKETVDFGPNYDGSETEPLVLPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++DG L++L NPE S+++LI+IIPAPDFPTAGIIYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNLCEIVDGCLHLLRNPEASVDELIEIIPAPDFPTAGIIYGVSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EKK+E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKKIEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKLTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT+FELRKARE H+LEGL +AL NID FI++I+S TP A+ ++E +W+ V
Sbjct: 361 VITRRTVFELRKARERGHVLEGLAVALANIDEFIELIKSAPTPPIARQALMERSWDSSLV 420
Query: 421 SKIIGFNKKNY---NTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
++ + + + + +N+S +Q + +Y+LS++QAQEIL+M LQRLT +EQ K
Sbjct: 421 RDMLARAESDTPGGRSAYRPDNLSPQFGMQADGLYRLSEVQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+ +Y +V+ ++ DL DIL+ RI EII EL I+ ++G ++RRS I NA
Sbjct: 481 IVQEYRDVMGQIADLLDILARPARITEIIITELTAIRQEFG----DVRRSFIENNATELD 536
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QDMV+TLS+ GY+KSQPISEYRAQKRGGRGK+A TKD+DWI+ LF+ANTHDY
Sbjct: 537 TEDLITPQDMVVTLSHGGYMKSQPISEYRAQKRGGRGKQATATKDDDWIDTLFVANTHDY 596
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L + EKI VILP+ + F + ++
Sbjct: 597 ILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSDGEKINVILPV----KQFDEEHF 652
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT L++FSNPRK+GIIAV+L DFLIGAA+T G +D+MLFSD+GKAVR
Sbjct: 653 VFMATSKGTVKKTALTDFSNPRKAGIIAVDLDEGDFLIGAAITAGKHDVMLFSDAGKAVR 712
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYGKR 765
F+EN VR MGR ARGV GM LE Q+VIA+LV++ + + SVLTATENGYGKR
Sbjct: 713 FDENDVRPMGRQARGVRGMNLEDGQQVIAMLVAHAESEATAGDAVQPSVLTATENGYGKR 772
Query: 766 TLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKM 825
T I EYT+H RGTKG+I+I+T++RNGKVVAA LV+ EIMLITTGG+LIRTRVSEIR+M
Sbjct: 773 TPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVSPEDEIMLITTGGVLIRTRVSEIREM 832
Query: 826 GRSTQGVILITVENKSKLCGVQRLCK 851
GR+TQGV LI+V+ +KL G+QR+ +
Sbjct: 833 GRATQGVTLISVDEGNKLSGLQRIVE 858
>gi|293604169|ref|ZP_06686577.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Achromobacter
piechaudii ATCC 43553]
gi|292817394|gb|EFF76467.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Achromobacter
piechaudii ATCC 43553]
Length = 891
Score = 1185 bits (3065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/859 (64%), Positives = 700/859 (81%), Gaps = 14/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG LY L NP C++++LI+IIPAPDFPT GIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLQEVVDGCLYCLRNPACTVDELIEIIPAPDFPTGGIIYGMSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ + NR AI+ID +PYQVNKK+L E+I++LV +KK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMEKGNRQAIVIDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQMIDYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMAKSWDSSLV 420
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ + +T + LQ + MY+LSD QAQEIL M LQRLT +EQ
Sbjct: 421 RDML--SRADGDTPGGRAAFRPDDLGTEFGLQGDGMYRLSDTQAQEILNMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+ +Y++++ + DL DIL+ +RI II+DEL IK ++ ++ K+ RRSEI LNA
Sbjct: 479 DKIVGEYKDIMSTIADLLDILARPERITTIISDELQAIKAEFSTNTKDSRRSEIELNATE 538
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A K+ DWI+QLFIANTH
Sbjct: 539 LDTEDLITPTDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATAMKENDWIDQLFIANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DY+LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L + EKITV+LP+ ++F ++
Sbjct: 599 DYLLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKITVVLPV----KEFSED 654
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+YVFM+TS G VKKT LS+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSDSGKA
Sbjct: 655 HYVFMATSRGTVKKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDSGKA 714
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR+ARGV GM LE+ Q VIALLV+ ++ Q+VLTATENGYGKRT I EYT
Sbjct: 715 VRFDENDVRPMGRNARGVRGMMLEETQTVIALLVAGDETQTVLTATENGYGKRTPIGEYT 774
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T RNGKVV A LVN EIMLITTGG+L+RTRV+EIR+MGR+TQGV
Sbjct: 775 RHGRGTKGMIAIQTTSRNGKVVGAVLVNPTDEIMLITTGGVLVRTRVAEIREMGRATQGV 834
Query: 833 ILITVENKSKLCGVQRLCK 851
LI V++ S L GV+R+ +
Sbjct: 835 TLINVDDGSTLSGVRRVVE 853
>gi|389871932|ref|YP_006379351.1| DNA gyrase subunit A [Advenella kashmirensis WT001]
gi|388537181|gb|AFK62369.1| DNA gyrase subunit A [Advenella kashmirensis WT001]
Length = 901
Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/861 (63%), Positives = 699/861 (81%), Gaps = 17/861 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FA+E + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDSFARETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG LY L NP C++++LI++IPAPDFPT GIIYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLSEVIDGCLYCLRNPGCTLDELIELIPAPDFPTGGIIYGITGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ + NR +II+DELPYQVNKK+L E+I++LV EKK+E IS++RDESDK G
Sbjct: 241 VMRAKTHFEDMEKGNRQSIIVDELPYQVNKKTLQERIAELVNEKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN L+K TQLQ+TFG+NM+ALV GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVILNNLFKHTQLQDTFGINMVALVEGQPRLLNLKQMVEYFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWN---- 416
V+ RRT+F+LRKARE H+LEGL +AL NID FI II+ TP A+ +++ W+
Sbjct: 361 VVTRRTVFQLRKARERGHLLEGLAVALANIDEFIAIIKGAPTPPVARQELMARNWDSSLV 420
Query: 417 ------LPDVSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNM 470
D S + G T++ +I LQ++ +Y+LSDIQAQEIL M LQRLT +
Sbjct: 421 RELLLRADDGSVLGGSAAYRPETLA---DIFGLQSDGLYRLSDIQAQEILNMRLQRLTGL 477
Query: 471 EQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNA 530
EQ KI+N+Y ++ + DL DIL+ +RI II+DEL IK ++ ++ K++RRSE+++NA
Sbjct: 478 EQDKIVNEYRGIMDTIADLLDILAKPERITAIISDELVAIKAEFSTNAKDVRRSEVVMNA 537
Query: 531 INPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIAN 590
TEDLI DMV+TLSN GYIKSQP+SEYRAQKRGGRGK+A K++DWI+QLFIAN
Sbjct: 538 TELDTEDLITPADMVVTLSNSGYIKSQPLSEYRAQKRGGRGKQATAMKEDDWIDQLFIAN 597
Query: 591 THDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFP 650
THD++LCFS+ GR+YWLKVW++PQG+R SRG+PI+NMF L + EKITV+LP+ R+F
Sbjct: 598 THDFLLCFSDRGRVYWLKVWEVPQGTRGSRGRPIVNMFPLIDGEKITVVLPV----REFS 653
Query: 651 KNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSG 710
++VFM+TS G VKKT LS+FSNPRK+GIIAV L D+LIGA LTDG +D+MLFSD+G
Sbjct: 654 DTSFVFMATSRGTVKKTPLSDFSNPRKAGIIAVALDEGDYLIGADLTDGEHDVMLFSDAG 713
Query: 711 KAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKE 770
KAVRF+EN VR MGR+ARGV GM L+ Q+VI+LLV+ ++ QSVLTATENGYGKRT I E
Sbjct: 714 KAVRFDENDVRPMGRTARGVRGMNLDGDQQVISLLVAGDESQSVLTATENGYGKRTSISE 773
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
YT+H RGTKG+I+I+T+ RNGKVV A LVN EIMLITTGG+L+RTRVSE+R+MGR+TQ
Sbjct: 774 YTRHGRGTKGMIAIQTSARNGKVVGAVLVNPSDEIMLITTGGVLVRTRVSEVREMGRATQ 833
Query: 831 GVILITVENKSKLCGVQRLCK 851
GV LI+V++ S L GV+R+ +
Sbjct: 834 GVTLISVDDGSSLSGVRRVVE 854
>gi|365092958|ref|ZP_09330035.1| DNA gyrase subunit A [Acidovorax sp. NO-1]
gi|363414906|gb|EHL22044.1| DNA gyrase subunit A [Acidovorax sp. NO-1]
Length = 888
Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/858 (63%), Positives = 700/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLGDIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NPE ++++L++IIPAPDFPTAGIIYG++ V DGY TG+G+V
Sbjct: 181 NIPPHNLNEVVDGCLHMLRNPEATVDELMEIIPAPDFPTAGIIYGINGVKDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+AL++GQP+L NL++++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALIDGQPRLCNLRDLISVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARDRGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMTRAWDSKLV 420
Query: 421 SKIIGFNKKNYNTIS----KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + I+ + + + K + + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVINADDYRPDGLEKEFGMGQDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ + DL DIL+ +R+ II DEL IK ++G HK RRS + +A +
Sbjct: 481 KIVAEYKEVMAVIEDLLDILAKPERVSTIIGDELTSIKQEFGQHKLGARRSIVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L++ EKI V+LPL+ + R FP ++
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQDGEKINVVLPLTGDMRTFPADH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L FSNPRK GIIAVNL + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATSMGTVKKTALDEFSNPRKGGIIAVNLDDGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR +GR+ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPLGRAARGVRGMMLEDGQSVIAMLVAEDETQSVLTATENGYGKRTSITEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ S+L G+QR+ +
Sbjct: 841 LIALDEGSQLSGLQRIVE 858
>gi|421484156|ref|ZP_15931728.1| DNA gyrase subunit A [Achromobacter piechaudii HLE]
gi|400197863|gb|EJO30827.1| DNA gyrase subunit A [Achromobacter piechaudii HLE]
Length = 889
Score = 1182 bits (3058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/857 (63%), Positives = 701/857 (81%), Gaps = 10/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG LY L NP C++++LI++IPAPDFPT GIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLQEVVDGCLYCLRNPACTVDELIELIPAPDFPTGGIIYGMSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ + NR AI+ID +PYQVNKK+L E+I++LV +KK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMEKGNRQAIVIDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQMIDYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFITIIKAAPTPPVARQELMAKSWDSSLV 420
Query: 421 SKIIG---FNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + + +++ LQ + MY+LSD QAQEIL M LQRLT +EQ K
Sbjct: 421 REMLSRADGDTPGGRSAFRPDDLDAEFGLQGDGMYRLSDTQAQEILNMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+ +Y++++ + DL DIL+ +RI II+DEL IK ++ + K+ RRSEI +NA
Sbjct: 481 IVGEYKDIMSTIADLLDILARPERITTIISDELQAIKAEFSTGVKDTRRSEIEMNATELD 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A K+ DWI+QLFIANTHD+
Sbjct: 541 TEDLITPTDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATAMKENDWIDQLFIANTHDF 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L + EKITV+LP+ ++F +++Y
Sbjct: 601 LLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKITVVLPV----KEFSEDHY 656
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT LS+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSDSGKAVR
Sbjct: 657 VFMATSRGTVKKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGQHDVMLFSDSGKAVR 716
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE+ Q VIALLV+ ++ Q+VLTATENGYGKRT I EYT+H
Sbjct: 717 FDENDVRPMGRNARGVRGMMLEETQTVIALLVAGDETQTVLTATENGYGKRTPIGEYTRH 776
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T+ RNGKVV A LVN EIMLITTGG+L+RTRV+EIR+MGR+TQGV L
Sbjct: 777 GRGTKGMIAIQTSSRNGKVVGAVLVNPTDEIMLITTGGVLVRTRVAEIREMGRATQGVTL 836
Query: 835 ITVENKSKLCGVQRLCK 851
I V++ S L GV+R+ +
Sbjct: 837 INVDDGSTLSGVRRVVE 853
>gi|351732286|ref|ZP_08949977.1| DNA gyrase subunit A [Acidovorax radicis N35]
Length = 890
Score = 1181 bits (3055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/881 (62%), Positives = 703/881 (79%), Gaps = 15/881 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLGDIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NP+ SI++L++IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHMLRNPDVSIDELMEIIPAPDFPTAGIIYGINGVKDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 IMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+AL++GQP+L NL++++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALIDGQPRLCNLRDLISVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARDRGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMARPWDSKLV 420
Query: 421 SKIIGFNKKNYNTIS----KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + + K + + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVVNADDYRPDGLEKELGMGQDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ + DL DIL+ +R+ II DEL IK ++G HK RRS + +A +
Sbjct: 481 KIVAEYKEVMAVIEDLLDILAKPERVSVIIGDELTSIKTEFGQHKLGARRSIVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L++ EKI V+LPL+ + R FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQDGEKINVVLPLTGDMRTFPADR 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM TS+G VKKT L FSNPRK GIIAVNL + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMGTSMGTVKKTALDEFSNPRKGGIIAVNLDDGDYLIGAALTDGQHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR +GR ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPLGRQARGVRGMMLEDGQSVIAMLVAEDETQSVLTATENGYGKRTSIVEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGT 874
LI ++ SKL G+QR+ + + P A G+GT
Sbjct: 841 LIALDEGSKLSGLQRIVENDA--------NVADPEADGEGT 873
>gi|163856193|ref|YP_001630491.1| DNA gyrase subunit A [Bordetella petrii DSM 12804]
gi|163259921|emb|CAP42222.1| DNA gyrase subunit A [Bordetella petrii]
Length = 885
Score = 1180 bits (3053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/859 (63%), Positives = 697/859 (81%), Gaps = 14/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGDSAAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG LY L NPECS+++LI++IPAPDFPT GIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLQEVVDGCLYCLRNPECSVDELIELIPAPDFPTGGIIYGMSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ + NR AI++D +PYQVNKK+L E+I++LV EKK+E IS++RDESDK G
Sbjct: 241 VMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVNEKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN LYK TQLQ+TFGMN++ALV+GQP+LLNLK++++YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVILNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIHYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMSRAWDSSLV 420
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ + + + ++ LQ + +Y+LSD QAQEIL M LQRLT +EQ
Sbjct: 421 REML--SRADLDAVGGPAAFRPDDLHESFGLQGDGLYRLSDTQAQEILNMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+ +Y++V+ + DL DIL+ +RI II +EL IK ++ + K+ RRSEI NA
Sbjct: 479 DKIVGEYKDVMATIADLLDILAKPERITTIIGEELQAIKAEFSTGAKDTRRSEIEFNATE 538
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A K+ DWI+QLFIANTH
Sbjct: 539 LDTEDLITPTDMVVTLSHAGYIKSQPLSEYRSQKRGGRGKQATAMKENDWIDQLFIANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
+Y+LCFS+ GR+YWLKVW++PQG+R SRG+PI+NMF L + EKITV+LP+ ++F ++
Sbjct: 599 NYLLCFSDRGRVYWLKVWEVPQGTRGSRGRPIVNMFPLADGEKITVVLPV----KEFSED 654
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
NYVFM+TS G VKKT LS+FSNPRK+GIIAV L D+LIGA LTDG +D+MLFSD+GKA
Sbjct: 655 NYVFMATSRGTVKKTPLSDFSNPRKAGIIAVGLDEGDYLIGADLTDGKHDVMLFSDAGKA 714
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR+ARGV GM LE Q VIALLV+ ++ QSVLTATENGYGKRT I EYT
Sbjct: 715 VRFDENDVRPMGRNARGVRGMTLEDGQSVIALLVAGDESQSVLTATENGYGKRTSIAEYT 774
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T+ RNGKVV A LV EIMLITTGG+L+RTRVSEIR+MGR+TQGV
Sbjct: 775 RHGRGTKGMIAIQTSSRNGKVVGAVLVMPSDEIMLITTGGVLVRTRVSEIREMGRATQGV 834
Query: 833 ILITVENKSKLCGVQRLCK 851
LI+V++ S L GV+R+ +
Sbjct: 835 TLISVDDGSSLSGVRRVVE 853
>gi|222110596|ref|YP_002552860.1| DNA gyrase subunit a [Acidovorax ebreus TPSY]
gi|221730040|gb|ACM32860.1| DNA gyrase, A subunit [Acidovorax ebreus TPSY]
Length = 877
Score = 1180 bits (3052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/858 (63%), Positives = 697/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L P+ ++++L++IIPAPDFPTAGIIYG++ V +GY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHLLRQPDATVDELMEIIPAPDFPTAGIIYGINGVKEGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R AII+DELPYQVNKK+L E++++LV EKKLE IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGQRQAIIVDELPYQVNKKTLQERMAELVHEKKLEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLCNLKDLIKVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI+IIR + TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMARSWDSQLV 420
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + +Q+ +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVVNADDYRPEGLEREFGMQDGGLYRLSDTQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ + DL DIL+ R+ II +EL+ ++ ++G K RRS I +A +
Sbjct: 481 KIVAEYKDVMSVIEDLLDILAKPARVSTIIGEELSTLRQEFGQSKVGARRSTIEHSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQAAATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSRNSRG+PI+NMF L EKI V+LPL+ R FP ++
Sbjct: 601 YILCFSNRGRLYWLKVWEVPSGSRNSRGRPIVNMFPLAEGEKINVVLPLTGGMRTFPADH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L FSNPRK GIIAVNL + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATSMGTVKKTALDEFSNPRKGGIIAVNLDDGDYLIGAALTDGQHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR +GR ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPLGRQARGVRGMMLEDGQSVIAMLVAEDENQSVLTATENGYGKRTSIVEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDTGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI+++ +KL G+QR+ +
Sbjct: 841 LISLDEGAKLSGLQRIVE 858
>gi|121594805|ref|YP_986701.1| DNA gyrase subunit A [Acidovorax sp. JS42]
gi|120606885|gb|ABM42625.1| DNA gyrase subunit A [Acidovorax sp. JS42]
Length = 888
Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/858 (63%), Positives = 696/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 12 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 71
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 72 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 131
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS+GIAVGMAT
Sbjct: 132 RYTEIRLSKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSAGIAVGMAT 191
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L P+ ++++L++IIPAPDFPTAGIIYG++ V +GY TG+G+V
Sbjct: 192 NIPPHNLNEVVDACLHLLRQPDATVDELMEIIPAPDFPTAGIIYGINGVKEGYRTGRGKV 251
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R AII+DELPYQVNKK+L E++++LV EKKLE IS+++DESDKSG
Sbjct: 252 VMRAKCHFEDIDKGQRQAIIVDELPYQVNKKTLQERMAELVHEKKLEGISHIQDESDKSG 311
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQPKL NLK+++ F+ HR+E
Sbjct: 312 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLCNLKDLIEVFLQHRRE 371
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI+IIR + TP AK +++ +W+ V
Sbjct: 372 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMARSWDSQLV 431
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + +Q +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 432 REMLTRTRADGGVVNADDYRPEGLEREFGMQEGGLYRLSDTQAQEILQMRLQRLTGLEQD 491
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ + DL DIL+ R+ II +EL+ ++ ++G K RRS I +A +
Sbjct: 492 KIVAEYKDVMSVIEDLLDILAKPARVSTIIGEELSTLRQEFGQSKVGARRSTIEHSAQDL 551
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 552 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQAAATKEDDWIDQLFIANTHD 611
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSRNSRG+PI+NMF L EKI V+LPL+ R FP ++
Sbjct: 612 YILCFSNRGRLYWLKVWEVPSGSRNSRGRPIVNMFPLAEGEKINVVLPLTGGMRTFPADH 671
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L FSNPRK GIIAVNL + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 672 YVFMATSMGTVKKTALDEFSNPRKGGIIAVNLDDGDYLIGAALTDGQHDVMLFSDGGKAV 731
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR +GR ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 732 RFDENDVRPLGRQARGVRGMMLEDGQSVIAMLVAEDENQSVLTATENGYGKRTSIVEYTR 791
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 792 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDTGVLVRTRVSEIRELGRATQGVT 851
Query: 834 LITVENKSKLCGVQRLCK 851
LI+++ +KL G+QR+ +
Sbjct: 852 LISLDEGAKLSGLQRIVE 869
>gi|238026529|ref|YP_002910760.1| DNA gyrase subunit A [Burkholderia glumae BGR1]
gi|37514955|dbj|BAC98434.1| GyrA protein [Burkholderia glumae]
gi|237875723|gb|ACR28056.1| DNA gyrase subunit A [Burkholderia glumae BGR1]
Length = 869
Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/858 (64%), Positives = 693/858 (80%), Gaps = 18/858 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSESEPTILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EV+D ++L NPE ++++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLSEVVDACHHLLANPEATVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKSTQLQDTFGMNMVALVDGQPKLLNLKEMLVCFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI+II++ TP A+ ++ +W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIEIIKAAPTPPIARQALMAKSWDSSLV 420
Query: 421 SKII---------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNME 471
+++ ++ Y +N +Q + Y LS+ QAQEIL+M LQRLT +E
Sbjct: 421 REMLTRAETENAAAGGREAYRP-EGLNAAFGMQADGQYNLSETQAQEILQMRLQRLTGLE 479
Query: 472 QKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI 531
Q KII +Y V+ ++ DL DIL+ +RI IIT+EL +K ++G + RRS+I LNA
Sbjct: 480 QDKIIGEYREVMAQIADLLDILARPERITTIITEELTAVKAEFG----DARRSKIELNAT 535
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANT
Sbjct: 536 ELNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANT 595
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HDYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ R+F
Sbjct: 596 HDYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----REFSA 651
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
+ YVFM+TSLG VKKT L FS P K GIIAV L + DFLIGA++TDG +D+MLFSDSGK
Sbjct: 652 DKYVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDDGDFLIGASITDGEHDVMLFSDSGK 711
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
AVRF+EN VR MGR ARGV GM+LE Q+VIA+LV+ ++QSVLTATENGYGKRT I EY
Sbjct: 712 AVRFDENDVRPMGREARGVRGMQLEDGQQVIAMLVAGGEEQSVLTATENGYGKRTPITEY 771
Query: 772 TKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQG 831
T+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQG
Sbjct: 772 TRHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQG 831
Query: 832 VILITVENKSKLCGVQRL 849
V LI+++ +KL G+Q++
Sbjct: 832 VTLISLDEGTKLSGLQQI 849
>gi|37514959|dbj|BAC98436.1| GyrA protein [Burkholderia glumae]
Length = 869
Score = 1179 bits (3049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/858 (64%), Positives = 693/858 (80%), Gaps = 18/858 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVR GLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRGGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDIAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSESEPTILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EV+D ++L NPE ++++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLSEVVDACHHLLANPEATVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKSTQLQDTFGMNMVALVDGQPKLLNLKEMLVCFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI+II++ TP A+ ++ +W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIEIIKAAPTPPIARQALMAKSWDSSLV 420
Query: 421 SKII---------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNME 471
+++ ++ Y +N +Q + Y LS+ QAQEIL+M LQRLT +E
Sbjct: 421 REMLTRAETENAAAGGREAYRP-EGLNAAFGMQADGQYNLSETQAQEILQMRLQRLTGLE 479
Query: 472 QKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI 531
Q KII +Y V+ ++ DL DIL+ +RI IIT+EL +K ++G + RRS+I LNA
Sbjct: 480 QDKIIGEYREVMAQIADLLDILARPERITTIITEELTAVKAEFG----DARRSKIELNAT 535
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANT
Sbjct: 536 ELNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANT 595
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HDYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ R+F
Sbjct: 596 HDYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPM----REFSA 651
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
+ YVFM+TSLG VKKT L FS P K GIIAV L + DFLIGA++TDG +D+MLFSDSGK
Sbjct: 652 DKYVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDDGDFLIGASITDGEHDVMLFSDSGK 711
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
AVRF+EN VR MGR ARGV GM+LE Q+VIA+LV+ ++QSVLTATENGYGKRT I EY
Sbjct: 712 AVRFDENDVRPMGREARGVRGMQLEDGQQVIAMLVAGGEEQSVLTATENGYGKRTPITEY 771
Query: 772 TKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQG 831
T+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQG
Sbjct: 772 TRHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQG 831
Query: 832 VILITVENKSKLCGVQRL 849
V LI+++ +KL G+Q++
Sbjct: 832 VTLISLDEGTKLSGLQQI 849
>gi|160900151|ref|YP_001565733.1| DNA gyrase subunit A [Delftia acidovorans SPH-1]
gi|151500324|gb|ABS12103.1| DNA gyrase A subunit [Delftia acidovorans]
gi|160365735|gb|ABX37348.1| DNA gyrase, A subunit [Delftia acidovorans SPH-1]
Length = 888
Score = 1179 bits (3049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/858 (63%), Positives = 698/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KIS+E+L D+DKET+D+ NYDG E+EP VLP R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKISHEMLGDIDKETVDYGPNYDGSEREPLVLPARLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L P+ +I++L++IIPAPDFPTAGIIYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHLLQTPQATIDELMEIIPAPDFPTAGIIYGINGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKLTQLQDTFGMNMVALVDGQPKLCNLKDLVEVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVYELRKARERGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMTRNWDSKLV 420
Query: 421 SKIIGFNKKNYNTIS----KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + + + +Q + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRTDGGVVNADDYRPDGLEREFGMQADGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ + DL DILS +R+ II DEL IK ++G K RRS + +A +
Sbjct: 481 KIVAEYKDVMSVIEDLLDILSKPERVSAIIGDELKQIKAEFGQSKVGARRSTVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRSQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
Y+LCFSN GRLYWLKVW++P GSR SRG+PI+NMF L++ EKI V+LPL+ R FP ++
Sbjct: 601 YLLCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQDGEKINVVLPLTGEYRSFPADH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFMSTS+G VKKT L FSNPRK+GIIAV L DFLIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMSTSMGTVKKTALDEFSNPRKAGIIAVGLDEGDFLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM LE+ Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPMGRNARGVKGMNLEEGQSVIAMLVAEDESQSVLTATENGYGKRTSIVEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDTGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI+++ +KL G+QR+ +
Sbjct: 841 LISLDEGAKLGGLQRIVE 858
>gi|254181083|ref|ZP_04887681.1| DNA gyrase, A subunit [Burkholderia pseudomallei 1655]
gi|184211622|gb|EDU08665.1| DNA gyrase, A subunit [Burkholderia pseudomallei 1655]
Length = 866
Score = 1178 bits (3048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/857 (64%), Positives = 696/857 (81%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D LY+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLYLLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ ++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 RDMLMRAETENAAAGGRDAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQIADLLDILARPERITTLIGDELTQVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ R+F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----REFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+T+LG VKKT L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKA
Sbjct: 653 KYVFMTTALGTVKKTPLEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLDDAQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|121598728|ref|YP_993880.1| DNA gyrase subunit A [Burkholderia mallei SAVP1]
gi|238561686|ref|ZP_04609705.1| DNA gyrase, A subunit [Burkholderia mallei GB8 horse 4]
gi|251766982|ref|ZP_04819906.1| DNA gyrase, A subunit [Burkholderia mallei PRL-20]
gi|254203931|ref|ZP_04910291.1| DNA gyrase, A subunit [Burkholderia mallei FMH]
gi|254208911|ref|ZP_04915259.1| DNA gyrase, A subunit [Burkholderia mallei JHU]
gi|386860898|ref|YP_006273847.1| DNA gyrase subunit A [Burkholderia pseudomallei 1026b]
gi|418380291|ref|ZP_12966275.1| DNA gyrase subunit A [Burkholderia pseudomallei 354a]
gi|418533368|ref|ZP_13099235.1| DNA gyrase subunit A [Burkholderia pseudomallei 1026a]
gi|418540158|ref|ZP_13105720.1| DNA gyrase subunit A [Burkholderia pseudomallei 1258a]
gi|418546408|ref|ZP_13111627.1| DNA gyrase subunit A [Burkholderia pseudomallei 1258b]
gi|418557459|ref|ZP_13122054.1| DNA gyrase subunit A [Burkholderia pseudomallei 354e]
gi|121227538|gb|ABM50056.1| DNA gyrase, A subunit [Burkholderia mallei SAVP1]
gi|147745443|gb|EDK52523.1| DNA gyrase, A subunit [Burkholderia mallei FMH]
gi|147750787|gb|EDK57856.1| DNA gyrase, A subunit [Burkholderia mallei JHU]
gi|238524138|gb|EEP87573.1| DNA gyrase, A subunit [Burkholderia mallei GB8 horse 4]
gi|243064219|gb|EES46405.1| DNA gyrase, A subunit [Burkholderia mallei PRL-20]
gi|385361403|gb|EIF67288.1| DNA gyrase subunit A [Burkholderia pseudomallei 1026a]
gi|385362554|gb|EIF68364.1| DNA gyrase subunit A [Burkholderia pseudomallei 1258a]
gi|385364710|gb|EIF70418.1| DNA gyrase subunit A [Burkholderia pseudomallei 1258b]
gi|385365101|gb|EIF70798.1| DNA gyrase subunit A [Burkholderia pseudomallei 354e]
gi|385377530|gb|EIF82101.1| DNA gyrase subunit A [Burkholderia pseudomallei 354a]
gi|385658026|gb|AFI65449.1| DNA gyrase subunit A [Burkholderia pseudomallei 1026b]
Length = 888
Score = 1178 bits (3048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/857 (64%), Positives = 696/857 (81%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 23 MDQFAKETLPTSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 82
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 83 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 142
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMAT
Sbjct: 143 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMAT 202
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D LY+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 203 NIPPHNLNEVVDACLYLLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 262
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 263 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 322
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+E
Sbjct: 323 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRRE 382
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 383 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSSLV 442
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ ++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 443 RDMLTRAETENAAAGGRDAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 502
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS+I LNA
Sbjct: 503 DKIIGEYRDVMAQIADLLDILARPERITTLIGDELTQVKAEFG----DARRSKIELNATE 558
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 559 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 618
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ R+F +
Sbjct: 619 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----REFSAD 674
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+T+LG VKKT L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKA
Sbjct: 675 KYVFMTTALGTVKKTPLEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKA 734
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT
Sbjct: 735 VRFDENDVRPMGREARGVRGMQLDDAQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYT 794
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 795 RHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQGV 854
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 855 TLISLDEGTKLSGLQQI 871
>gi|53724794|ref|YP_102248.1| DNA gyrase subunit A [Burkholderia mallei ATCC 23344]
gi|124385239|ref|YP_001026943.1| DNA gyrase subunit A [Burkholderia mallei NCTC 10229]
gi|126450865|ref|YP_001079770.1| DNA gyrase subunit A [Burkholderia mallei NCTC 10247]
gi|254176796|ref|ZP_04883453.1| DNA gyrase, A subunit [Burkholderia mallei ATCC 10399]
gi|254360034|ref|ZP_04976304.1| DNA gyrase, A subunit [Burkholderia mallei 2002721280]
gi|52428217|gb|AAU48810.1| DNA gyrase, A subunit [Burkholderia mallei ATCC 23344]
gi|124293259|gb|ABN02528.1| DNA gyrase, A subunit [Burkholderia mallei NCTC 10229]
gi|126243735|gb|ABO06828.1| DNA gyrase, A subunit [Burkholderia mallei NCTC 10247]
gi|148029274|gb|EDK87179.1| DNA gyrase, A subunit [Burkholderia mallei 2002721280]
gi|160697837|gb|EDP87807.1| DNA gyrase, A subunit [Burkholderia mallei ATCC 10399]
Length = 866
Score = 1178 bits (3048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/857 (64%), Positives = 696/857 (81%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D LY+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLYLLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ ++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 RDMLTRAETENAAAGGRDAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQIADLLDILARPERITTLIGDELTQVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ R+F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----REFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+T+LG VKKT L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKA
Sbjct: 653 KYVFMTTALGTVKKTPLEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLDDAQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|402567236|ref|YP_006616581.1| DNA gyrase subunit A [Burkholderia cepacia GG4]
gi|402248433|gb|AFQ48887.1| DNA gyrase subunit A [Burkholderia cepacia GG4]
Length = 867
Score = 1178 bits (3048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/859 (64%), Positives = 695/859 (80%), Gaps = 16/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +PSVLP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFEPNYDGNETQPSVLPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLSNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID+FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKQELMAKPWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAEAENASAGGRSAYRPEGLNPAFGMQVDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y V+ ++ DL DIL+ +RI +I +EL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYREVMAQIADLLDILARPERITTMIGEELTTVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
Y+FM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSD+GKA
Sbjct: 653 KYIFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIALLV+ +++Q+VLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIALLVAGSEEQTVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRLCK 851
LI+++ +KL G+Q++ +
Sbjct: 833 TLISLDEGTKLSGLQQIAE 851
>gi|37514963|dbj|BAC98438.1| GyrA protein [Burkholderia glumae]
Length = 869
Score = 1178 bits (3047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/858 (64%), Positives = 693/858 (80%), Gaps = 18/858 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDIAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSESEPTILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EV+D ++L NPE ++++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLSEVVDACHHLLANPEATVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKSTQLQDTFGMNMVALVDGQPKLLNLKEMLVCFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI+II++ TP A+ ++ +W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIEIIKAAPTPPIARQALMAKSWDSSLV 420
Query: 421 SKII---------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNME 471
+++ ++ Y +N +Q + Y LS+ QAQEIL+M LQRLT +E
Sbjct: 421 REMLTRAETENAAAGGREAYRP-EGLNAAFGMQADGQYNLSETQAQEILQMRLQRLTGLE 479
Query: 472 QKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI 531
Q KII +Y V+ ++ DL DIL+ +RI IIT+EL +K ++G + RRS+I LNA
Sbjct: 480 QDKIIGEYREVMAQIADLLDILARPERITTIITEELTAVKAEFG----DARRSKIELNAT 535
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANT
Sbjct: 536 ELNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANT 595
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HDYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ R+F
Sbjct: 596 HDYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----REFSA 651
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
+ YVFM+TSLG VKKT L FS P K GIIAV L + DFLIGA++TDG +D+MLFSDSGK
Sbjct: 652 DKYVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDDGDFLIGASITDGEHDVMLFSDSGK 711
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
AVRF+EN VR MGR ARGV GM+LE Q+VI +LV+ ++QSVLTATENGYGKRT I EY
Sbjct: 712 AVRFDENDVRPMGREARGVRGMQLEDGQQVIPMLVAGGEEQSVLTATENGYGKRTPITEY 771
Query: 772 TKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQG 831
T+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQG
Sbjct: 772 TRHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQG 831
Query: 832 VILITVENKSKLCGVQRL 849
V LI+++ +KL G+Q++
Sbjct: 832 VTLISLDEGTKLSGLQQI 849
>gi|187477845|ref|YP_785869.1| DNA gyrase subunit A [Bordetella avium 197N]
gi|115422431|emb|CAJ48956.1| DNA gyrase subunit A [Bordetella avium 197N]
Length = 883
Score = 1178 bits (3047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/855 (64%), Positives = 692/855 (80%), Gaps = 10/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV++G LY L NPEC+I++L++IIPAPDFPT GIIYG+ V +GY TG+GRV
Sbjct: 181 NIPPHNLGEVVEGCLYCLRNPECTIDELLEIIPAPDFPTGGIIYGMVGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ ++ NR AI++D +PYQVNKK+L E+I++LV EKK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMDKGNRQAIVVDAIPYQVNKKTLQERIAELVNEKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLISYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARNWDSSLV 420
Query: 421 SKIIG------FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + LQ + Y+LS+ QAQEIL M LQRLT +EQ K
Sbjct: 421 REMLARADGDVVGGRQAFRPEDLPEGFGLQGDGQYRLSETQAQEILNMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
II +Y++V+ + DL DIL+ +RI II +EL IK ++ S K+ RRSEI LNA
Sbjct: 481 IIGEYKDVMDTIADLLDILARPERITTIIGEELQAIKAEFSSGAKDSRRSEIELNATELD 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+T+S+ GYIKSQP+SEYR+QKRGGRGK+A K+ DW++QLFIANTHDY
Sbjct: 541 TEDLITPMDMVVTMSHGGYIKSQPLSEYRSQKRGGRGKQATQMKENDWVDQLFIANTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L + EKITV+LP+ ++F ++Y
Sbjct: 601 LLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKITVVLPV----KEFSDDHY 656
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT LS+FSNPRK+GIIAV+L D+LIGA LTDG +D+MLFSDSGKAVR
Sbjct: 657 VFMATSRGTVKKTALSDFSNPRKAGIIAVDLDEGDYLIGADLTDGKHDVMLFSDSGKAVR 716
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE Q VIALLV+ ++ QSVLTATENGYGKRT I EYT+H
Sbjct: 717 FDENDVRPMGRAARGVRGMMLEDSQSVIALLVAGDESQSVLTATENGYGKRTSIAEYTRH 776
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T+ RNG+VV A LVN EIMLITTGG+L+RTRVSEIR+MGR+TQGV L
Sbjct: 777 GRGTKGMIAIQTSSRNGRVVGAVLVNPSDEIMLITTGGVLVRTRVSEIREMGRATQGVTL 836
Query: 835 ITVENKSKLCGVQRL 849
I+V++ S L GV+R+
Sbjct: 837 ISVDDGSSLSGVRRV 851
>gi|452124289|ref|ZP_21936873.1| DNA gyrase subunit A [Bordetella holmesii F627]
gi|452127687|ref|ZP_21940267.1| DNA gyrase subunit A [Bordetella holmesii H558]
gi|451923519|gb|EMD73660.1| DNA gyrase subunit A [Bordetella holmesii F627]
gi|451926556|gb|EMD76689.1| DNA gyrase subunit A [Bordetella holmesii H558]
Length = 879
Score = 1178 bits (3047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/857 (63%), Positives = 696/857 (81%), Gaps = 11/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV++G LY L NPEC+I++L++IIPAPDFPT GIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLGEVVEGCLYCLRNPECTIDELLEIIPAPDFPTGGIIYGMSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ + NR AI++D +PYQVNKK+L E+I++LV +KK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIDYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARAWDSSLV 420
Query: 421 SKII----GFNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ G + +++ + LQ + Y+LS+ QAQEIL M LQRLT +EQ
Sbjct: 421 REMLARADGGEVAGGRHAFRPDDLPEGFGLQGDGQYRLSETQAQEILNMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KII +Y+ V+ + DL DIL+ +RI II DEL IK ++ + K+ RRSEI NA
Sbjct: 481 KIIGEYKEVMDTIADLLDILARPERITTIIGDELQAIKAEFSTAAKDSRRSEIEFNATEL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLI DMV+T+S+ GYIKSQP+SEYR+QKRGGRGK+A K+ DW++QLFIANTHD
Sbjct: 541 DTEDLITPMDMVVTMSHGGYIKSQPLSEYRSQKRGGRGKQATQMKENDWVDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
Y+LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L + EKITV+LP+ ++F +++
Sbjct: 601 YLLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKITVVLPV----KEFSEDH 656
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS G VKKT LS+FSNPRK+GIIAV+L + D+LIGA +TDG +D+MLFSD+GKAV
Sbjct: 657 YVFMATSRGTVKKTALSDFSNPRKAGIIAVDLDDGDYLIGADVTDGKHDVMLFSDAGKAV 716
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM LE Q VIALLV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 717 RFDENDVRPMGRAARGVRGMMLEDSQTVIALLVAGDESQSVLTATENGYGKRTSIAEYTR 776
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+T+ RNGKVV A LVN EIMLITTGG+L+RTRVSEIR+MGR+TQGV
Sbjct: 777 HGRGTKGMIAIQTSSRNGKVVGAVLVNPSDEIMLITTGGVLVRTRVSEIREMGRATQGVT 836
Query: 834 LITVENKSKLCGVQRLC 850
LI+V++ S L GV+R+
Sbjct: 837 LISVDDGSSLSGVRRVV 853
>gi|37514957|dbj|BAC98435.1| GyrA protein [Burkholderia glumae]
Length = 869
Score = 1177 bits (3046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/858 (64%), Positives = 693/858 (80%), Gaps = 18/858 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDRAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSESEPTILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EV+D ++L NPE ++++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLSEVVDACHHLLANPEATVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKSTQLQDTFGMNMVALVDGQPKLLNLKEMLVCFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI+II++ TP A+ ++ +W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIEIIKAAPTPPIARQALMAKSWDSSLV 420
Query: 421 SKII---------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNME 471
+++ ++ Y +N +Q + Y LS+ QAQEIL+M LQRLT +E
Sbjct: 421 REMLTRAETENAAAGGREAYRP-EGLNAAFGMQADGQYNLSETQAQEILQMRLQRLTGLE 479
Query: 472 QKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI 531
Q KII +Y V+ ++ DL DIL+ +RI IIT+EL +K ++G + RRS+I LNA
Sbjct: 480 QDKIIGEYREVMAQIADLLDILARPERITTIITEELTAVKAEFG----DARRSKIELNAT 535
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANT
Sbjct: 536 ELNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANT 595
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HDYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ R+F
Sbjct: 596 HDYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----REFLA 651
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
+ YVFM+TSLG VKKT L FS P K GIIAV L + DFLIGA++TDG +D+MLFSDSGK
Sbjct: 652 DKYVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDDGDFLIGASITDGEHDVMLFSDSGK 711
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
AVRF+EN VR MGR ARGV GM+LE Q+VIA+LV+ ++QSVLTATENGYGKRT I EY
Sbjct: 712 AVRFDENDVRPMGREARGVRGMQLEDGQQVIAMLVAGGEEQSVLTATENGYGKRTPITEY 771
Query: 772 TKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQG 831
T+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQG
Sbjct: 772 TRHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQG 831
Query: 832 VILITVENKSKLCGVQRL 849
V LI+++ +KL G+Q++
Sbjct: 832 VTLISLDEGTKLSGLQQI 849
>gi|241764515|ref|ZP_04762535.1| DNA gyrase, A subunit [Acidovorax delafieldii 2AN]
gi|241366051|gb|EER60655.1| DNA gyrase, A subunit [Acidovorax delafieldii 2AN]
Length = 885
Score = 1177 bits (3045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/858 (63%), Positives = 696/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLGDIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NPE SI++L++IIPAPDFPTAGIIYG++ V DGY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHMLRNPETSIDELMEIIPAPDFPTAGIIYGINGVKDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+AL++GQP+L NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALIDGQPRLCNLKDLIVVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ H+LEGL +AL NID+FI IIR+ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFELRKARDRGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMTRSWDSKLV 420
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + + + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVVNADDYRPEGLEREFGMGQDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ + DL DIL+ +R+ II +EL IK ++G HK RRS I +A +
Sbjct: 481 KIVAEYKEVMAVIEDLLDILAKPERVSTIIGEELTSIKQEFGQHKLGARRSIIEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L++ EKI V+LPL+ + R FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQDGEKINVVLPLTGDMRSFPADR 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
+VFM TS+G VKKT L FSNPRK GIIAVNL + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 FVFMGTSMGTVKKTALDEFSNPRKGGIIAVNLDDGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR +GR+ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPLGRAARGVRGMMLEDGQSVIAMLVAEDETQSVLTATENGYGKRTSIVEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ SKL G+QR+ +
Sbjct: 841 LIALDEGSKLSGLQRIVE 858
>gi|333913780|ref|YP_004487512.1| DNA gyrase subunit A [Delftia sp. Cs1-4]
gi|333743980|gb|AEF89157.1| DNA gyrase, A subunit [Delftia sp. Cs1-4]
Length = 888
Score = 1177 bits (3045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/858 (63%), Positives = 698/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KIS+E+L D+DKET+D+ NYDG E+EP VLP R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKISHEMLGDIDKETVDYGPNYDGSEREPLVLPARLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L P+ +I++L++IIPAPDFPTAGIIYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHLLQTPQATIDELMEIIPAPDFPTAGIIYGINGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKLTQLQDTFGMNMVALVDGQPKLCNLKDLVEVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVYELRKARERGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMTRNWDSKLV 420
Query: 421 SKIIGFNKKNYNTIS----KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + + + +Q + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRTDGGVVNADDYRPDGLEREFGMQADGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ + DL DILS +R+ II DEL IK ++G K RRS + +A +
Sbjct: 481 KIVAEYKDVMSVIEDLLDILSKPERVSAIIGDELKQIKAEFGQSKVGARRSTVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRSQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
Y+LCFSN GRLYWLKVW++P GSR SRG+PI+NMF L++ EKI V+LPL+ R FP ++
Sbjct: 601 YLLCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQDGEKINVVLPLTGEYRSFPADH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFMSTS+G VKKT L FSNPRK+GIIAV L DFLIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMSTSMGTVKKTALDEFSNPRKAGIIAVGLDEGDFLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM LE+ Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPMGRNARGVKGMNLEEGQSVIAMLVAEDESQSVLTATENGYGKRTSIVEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDTGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI+++ +KL G+QR+ +
Sbjct: 841 LISLDEGAKLGGLQRIVE 858
>gi|149774749|gb|ABR28421.1| DNA gyrase A subunit [Delftia tsuruhatensis]
Length = 888
Score = 1177 bits (3045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/858 (63%), Positives = 698/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+D+ NYDG E+EP VLP R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLGDIDKETVDYGPNYDGSEREPLVLPARLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L P+ +I++L++IIPAPDFPTAGIIYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHLLQTPQATIDELMEIIPAPDFPTAGIIYGINGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKLTQLQDTFGMNMVALVDGQPKLCNLKDLVEVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVYELRKARERGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMTRNWDSKLV 420
Query: 421 SKIIGFNKKNYNTIS----KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + + + +Q + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRTDGGVVNADDYRPDGLEREFGMQADGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ + DL DILS +R+ II DEL IK ++G K RRS + +A +
Sbjct: 481 KIVAEYKDVMSVIEDLLDILSKPERVSAIIGDELKQIKAEFGQSKVGARRSTVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRSQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
Y+LCFSN GRLYWLKVW++P GSR SRG+PI+NMF L++ EKI V+LPL+ R FP ++
Sbjct: 601 YLLCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQDGEKINVVLPLTGEYRSFPADH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFMSTS+G VKKT L FSNPRK+GIIAV L DFLIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMSTSMGTVKKTALDEFSNPRKAGIIAVGLDEGDFLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM LE+ Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPMGRNARGVKGMTLEEGQSVIAMLVAEDESQSVLTATENGYGKRTSIVEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDTGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI+++ +KL G+QR+ +
Sbjct: 841 LISLDEGAKLGGLQRIVE 858
>gi|53720131|ref|YP_109117.1| DNA gyrase subunit A [Burkholderia pseudomallei K96243]
gi|76811820|ref|YP_334380.1| DNA gyrase subunit A [Burkholderia pseudomallei 1710b]
gi|126440756|ref|YP_001059907.1| DNA gyrase subunit A [Burkholderia pseudomallei 668]
gi|126453773|ref|YP_001067196.1| DNA gyrase subunit A [Burkholderia pseudomallei 1106a]
gi|134277587|ref|ZP_01764302.1| DNA gyrase, A subunit [Burkholderia pseudomallei 305]
gi|167720674|ref|ZP_02403910.1| DNA gyrase subunit A [Burkholderia pseudomallei DM98]
gi|167739661|ref|ZP_02412435.1| DNA gyrase subunit A [Burkholderia pseudomallei 14]
gi|167825268|ref|ZP_02456739.1| DNA gyrase subunit A [Burkholderia pseudomallei 9]
gi|167846771|ref|ZP_02472279.1| DNA gyrase subunit A [Burkholderia pseudomallei B7210]
gi|167895358|ref|ZP_02482760.1| DNA gyrase subunit A [Burkholderia pseudomallei 7894]
gi|167903745|ref|ZP_02490950.1| DNA gyrase subunit A [Burkholderia pseudomallei NCTC 13177]
gi|167911993|ref|ZP_02499084.1| DNA gyrase subunit A [Burkholderia pseudomallei 112]
gi|167919984|ref|ZP_02507075.1| DNA gyrase subunit A [Burkholderia pseudomallei BCC215]
gi|226197855|ref|ZP_03793429.1| DNA gyrase, A subunit [Burkholderia pseudomallei Pakistan 9]
gi|242315131|ref|ZP_04814147.1| DNA gyrase, A subunit [Burkholderia pseudomallei 1106b]
gi|254191969|ref|ZP_04898469.1| DNA gyrase, A subunit [Burkholderia pseudomallei Pasteur 52237]
gi|254261157|ref|ZP_04952211.1| DNA gyrase, A subunit [Burkholderia pseudomallei 1710a]
gi|52210545|emb|CAH36528.1| DNA Gyrase, subunit A [Burkholderia pseudomallei K96243]
gi|76581273|gb|ABA50748.1| DNA gyrase, A subunit [Burkholderia pseudomallei 1710b]
gi|126220249|gb|ABN83755.1| DNA gyrase, A subunit [Burkholderia pseudomallei 668]
gi|126227415|gb|ABN90955.1| DNA gyrase, A subunit [Burkholderia pseudomallei 1106a]
gi|134251237|gb|EBA51316.1| DNA gyrase, A subunit [Burkholderia pseudomallei 305]
gi|157987791|gb|EDO95556.1| DNA gyrase, A subunit [Burkholderia pseudomallei Pasteur 52237]
gi|225930043|gb|EEH26056.1| DNA gyrase, A subunit [Burkholderia pseudomallei Pakistan 9]
gi|242138370|gb|EES24772.1| DNA gyrase, A subunit [Burkholderia pseudomallei 1106b]
gi|254219846|gb|EET09230.1| DNA gyrase, A subunit [Burkholderia pseudomallei 1710a]
Length = 866
Score = 1177 bits (3044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/857 (64%), Positives = 696/857 (81%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D LY+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLYLLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ ++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 RDMLTRAETENAAAGGRDAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQIADLLDILARPERITTLIGDELTQVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+T+LG VKKT L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKA
Sbjct: 653 KYVFMTTALGTVKKTPLEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLDDAQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|359798451|ref|ZP_09301022.1| DNA gyrase subunit A [Achromobacter arsenitoxydans SY8]
gi|359363273|gb|EHK64999.1| DNA gyrase subunit A [Achromobacter arsenitoxydans SY8]
Length = 886
Score = 1177 bits (3044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/857 (63%), Positives = 697/857 (81%), Gaps = 10/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG LY L NP C++++LI+IIPAPDFPT GIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLQEVVDGCLYCLRNPACTVDELIEIIPAPDFPTGGIIYGMSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ + NR AI+ID +PYQVNKK+L E+I++LV +KK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMEKGNRQAIVIDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQMIDYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMAKSWDSSLV 420
Query: 421 SKIIG---FNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + +++ LQ + +Y+LSD QAQEIL M LQRLT +EQ K
Sbjct: 421 REMLSRADGDTPGGRAAFRPDDLGAEFGLQGDGLYRLSDTQAQEILNMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+ +Y++++ + DL DIL+ +RI II DEL IK ++ + K+ RRSEI LNA
Sbjct: 481 IVGEYKDIMSTIADLLDILARPERITAIIGDELQAIKAEFSTGAKDTRRSEIELNATELD 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A K+ DWI+QLFIANTHD+
Sbjct: 541 TEDLITPTDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATAMKENDWIDQLFIANTHDF 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L + EKITV+LP+ ++F +++Y
Sbjct: 601 LLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKITVVLPV----KEFSEDHY 656
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT LS+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSD+GKAVR
Sbjct: 657 VFMATSRGTVKKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVR 716
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE Q VIALLV+ ++ Q+VLTATENGYGKRT I EYT+H
Sbjct: 717 FDENDVRPMGRNARGVRGMMLEDTQTVIALLVAGDETQTVLTATENGYGKRTPIGEYTRH 776
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T+ RNGKVV A LV EIMLITTGG+L+RTRV+EIR+MGR+TQGV L
Sbjct: 777 GRGTKGMIAIQTSSRNGKVVGAVLVMPSDEIMLITTGGVLVRTRVAEIREMGRATQGVTL 836
Query: 835 ITVENKSKLCGVQRLCK 851
I V++ S L GV+R+ +
Sbjct: 837 INVDDGSSLSGVRRVVE 853
>gi|217420486|ref|ZP_03451991.1| DNA gyrase, A subunit [Burkholderia pseudomallei 576]
gi|237813301|ref|YP_002897752.1| DNA gyrase subunit A [Burkholderia pseudomallei MSHR346]
gi|254195657|ref|ZP_04902084.1| DNA gyrase, A subunit [Burkholderia pseudomallei S13]
gi|169652403|gb|EDS85096.1| DNA gyrase, A subunit [Burkholderia pseudomallei S13]
gi|217395898|gb|EEC35915.1| DNA gyrase, A subunit [Burkholderia pseudomallei 576]
gi|237503052|gb|ACQ95370.1| DNA gyrase, A subunit [Burkholderia pseudomallei MSHR346]
Length = 888
Score = 1177 bits (3044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/857 (64%), Positives = 696/857 (81%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 23 MDQFAKETLPTSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 82
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 83 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 142
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMAT
Sbjct: 143 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMAT 202
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D LY+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 203 NIPPHNLNEVVDACLYLLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 262
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 263 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 322
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+E
Sbjct: 323 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRRE 382
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 383 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSSLV 442
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ ++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 443 RDMLTRAETENAAAGGRDAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 502
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS+I LNA
Sbjct: 503 DKIIGEYRDVMAQIADLLDILARPERITTLIGDELTQVKAEFG----DARRSKIELNATE 558
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 559 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 618
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 619 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 674
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+T+LG VKKT L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKA
Sbjct: 675 KYVFMTTALGTVKKTPLEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKA 734
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT
Sbjct: 735 VRFDENDVRPMGREARGVRGMQLDDAQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYT 794
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 795 RHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQGV 854
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 855 TLISLDEGTKLSGLQQI 871
>gi|167816867|ref|ZP_02448547.1| DNA gyrase subunit A [Burkholderia pseudomallei 91]
Length = 866
Score = 1176 bits (3043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/857 (64%), Positives = 696/857 (81%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D LY+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLYLLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDKFIAIIKAAPTPPIAKQELMAKSWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ ++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 RDMLTRAETENAAAGGRDAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQIADLLDILARPERITTLIGDELTQVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+T+LG VKKT L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKA
Sbjct: 653 KYVFMTTALGTVKKTPLEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLDDAQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|311104909|ref|YP_003977762.1| DNA gyrase subunit A [Achromobacter xylosoxidans A8]
gi|310759598|gb|ADP15047.1| DNA gyrase, A subunit [Achromobacter xylosoxidans A8]
Length = 889
Score = 1176 bits (3043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/859 (63%), Positives = 698/859 (81%), Gaps = 14/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG LY L NP CS+++L+++IPAPDFPT GIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLQEVVDGCLYCLRNPGCSVDELMELIPAPDFPTGGIIYGMSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ + NR AI++D +PYQVNKK+L E+I++LV +KK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQMIDYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMAKSWDSSLV 420
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ + +T + LQ + MY+LSD QAQEIL M LQRLT +EQ
Sbjct: 421 REML--SRADGDTPGGRAAFRPDDLGTEFGLQGDGMYRLSDTQAQEILNMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+ +Y++++ + DL DIL+ +RI II+DEL IK ++ + K+ RRS+I LNA
Sbjct: 479 DKIVGEYKDIMSTIADLLDILARPERITTIISDELQAIKAEFSTGVKDTRRSDIELNATE 538
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A K+ DWI+QLFIANTH
Sbjct: 539 LDTEDLITPTDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATAMKENDWIDQLFIANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D++LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L EKITV+LP+ ++F ++
Sbjct: 599 DFLLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLTEGEKITVVLPV----KEFSED 654
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+YVFM+TS G VKKT LS+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSD+GKA
Sbjct: 655 HYVFMATSRGTVKKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKA 714
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR+ARGV GM LE Q VIALLV+ ++ QSVLTATENGYGKRT I EYT
Sbjct: 715 VRFDENDVRPMGRNARGVRGMMLEDTQTVIALLVAGDETQSVLTATENGYGKRTPITEYT 774
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T+ RNGKVV A LV EIMLITTGG+L+RTRVSEIR+MGR+TQGV
Sbjct: 775 RHGRGTKGMIAIQTSSRNGKVVGAVLVMPSDEIMLITTGGVLVRTRVSEIREMGRATQGV 834
Query: 833 ILITVENKSKLCGVQRLCK 851
LI V++ S L GV+R+ +
Sbjct: 835 TLINVDDGSSLSGVRRVVE 853
>gi|407939416|ref|YP_006855057.1| DNA gyrase subunit A [Acidovorax sp. KKS102]
gi|407897210|gb|AFU46419.1| DNA gyrase subunit A [Acidovorax sp. KKS102]
Length = 888
Score = 1176 bits (3043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/858 (63%), Positives = 697/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++Y +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYGTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLGDIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NPE SI++L++IIPAPDFPTAGIIYG++ V DGY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHMLRNPEASIDELMEIIPAPDFPTAGIIYGINGVKDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+AL++GQP+L NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALIDGQPRLCNLKDLISVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ H+LEGL +AL NID+FI IIR+ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFELRKARDRGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMTRSWDSKLV 420
Query: 421 SKIIGFNKKNYNTIS----KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + I+ + + K + + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVINADDYRPEGLEKEFGMGQDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ + DL DIL+ +R+ II DEL IK ++G HK RRS + +A +
Sbjct: 481 KIVAEYKEVMAVIEDLLDILAKPERVSVIIGDELTSIKQEFGQHKLGARRSIVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L++ EKI V+LPL+ + R FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQDGEKINVVLPLTGDMRSFPADR 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
+VFM+TS+G VKKT L FSNPRK GIIAVNL + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 FVFMATSMGTVKKTALDEFSNPRKGGIIAVNLDDGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR +GR+ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPLGRAARGVRGMMLEDGQSVIAMLVAEDETQSVLTATENGYGKRTSIVEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ SKL G+QR+ +
Sbjct: 841 LIALDEGSKLSGLQRIVE 858
>gi|167563636|ref|ZP_02356552.1| DNA gyrase subunit A [Burkholderia oklahomensis EO147]
Length = 866
Score = 1176 bits (3043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/858 (64%), Positives = 699/858 (81%), Gaps = 18/858 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D LY+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLYLLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRATTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+ QPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDNQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID+FI II++ TP AK +++ +W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKQELMAKSWDSSLV 420
Query: 421 SKII---------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNME 471
+++ ++ Y ++ +Q + Y+LSD QAQEIL+M LQRLT +E
Sbjct: 421 REMLTRAETENAAAGGREAYRP-EGLSPAFGMQGDGFYRLSDTQAQEILQMRLQRLTGLE 479
Query: 472 QKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI 531
Q KII +Y +V+ ++ DL DIL+ +RI +I +ELN +K ++G ++RRS+I LNA
Sbjct: 480 QDKIIGEYRDVMAQIADLLDILARPERITVMIGEELNAVKVEFG----DVRRSKIELNAT 535
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANT
Sbjct: 536 ELNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANT 595
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HDYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ R+F
Sbjct: 596 HDYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----REFSA 651
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
+ YVFM+T+LG VKKT L FS P K GIIAV L D+LIGAA+TDG++D+MLFSD+GK
Sbjct: 652 DKYVFMTTALGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGAAITDGAHDVMLFSDAGK 711
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
AVRF+EN VR MGR ARGV GM+L++ Q+VIA+LV+ +++QSVLTATENG+GKRT I EY
Sbjct: 712 AVRFDENDVRPMGREARGVRGMQLDEGQQVIAMLVAGSEEQSVLTATENGFGKRTPITEY 771
Query: 772 TKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQG 831
T+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQG
Sbjct: 772 TRHGRGTKGMIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQG 831
Query: 832 VILITVENKSKLCGVQRL 849
V LI+++ +KL G+Q++
Sbjct: 832 VTLISLDEGTKLSGLQQI 849
>gi|91787677|ref|YP_548629.1| DNA gyrase subunit A [Polaromonas sp. JS666]
gi|91696902|gb|ABE43731.1| DNA gyrase subunit A [Polaromonas sp. JS666]
Length = 880
Score = 1176 bits (3042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/858 (63%), Positives = 701/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSLRHLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL DLDKET+DF NYDG E+EP V+PTR+PNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADLDKETVDFGPNYDGSEQEPLVMPTRLPNLLVNGSGGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NPE SI++L++I+PAPDFPT GIIYG++ V DGY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHMLKNPEASIDELMEIVPAPDFPTGGIIYGINGVKDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R +II+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALVNGQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVNGQPKLCNLKDLIQVFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F LRKARE H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFTLRKARERGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMLRPWDSSLV 420
Query: 421 SKIIGFNKKNYNTIS----KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + + K + ++ +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVVNADDYRPDGLEKAFGMGSDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ ++ DL DIL+ +R+ II +EL+ IK ++G K RRS+I ++ +
Sbjct: 481 KIVAEYKEVMAEIDDLLDILAKPERVSIIIGEELSAIKLEFGQTKLGARRSQIEHSSFDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DW++QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHSGYIKSQPLSEYRAQKRGGRGKQATATKEDDWVDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L+ EKITV+LPL+ KR FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKITVVLPLTGEKRSFPADQ 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L FSNPRK+GIIAV+L + D+LIGA+LTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATSMGTVKKTTLDEFSNPRKAGIIAVDLDDGDYLIGASLTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM LE Q VIA+LV+ +++QSVLTAT+NGYGKRT I EYT+
Sbjct: 721 RFDENDVRPMGRNARGVRGMTLEDGQGVIAMLVAEDEQQSVLTATQNGYGKRTSITEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR+MGR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHVDDEIMLITDKGVLVRTRVSEIREMGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ S+L G+QR+ +
Sbjct: 841 LIGLDEGSQLSGLQRIVE 858
>gi|37514961|dbj|BAC98437.1| GyrA protein [Burkholderia glumae]
Length = 869
Score = 1176 bits (3042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/858 (64%), Positives = 692/858 (80%), Gaps = 18/858 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM + YLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRLYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDRAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSESEPTILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EV+D ++L NPE ++++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLSEVVDACHHLLANPEATVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKSTQLQDTFGMNMVALVDGQPKLLNLKEMLVCFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI+II++ TP A+ ++ +W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIEIIKAAPTPPIARQALMAKSWDSSLV 420
Query: 421 SKII---------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNME 471
+++ ++ Y +N +Q + Y LS+ QAQEIL+M LQRLT +E
Sbjct: 421 REMLTRAETENAAAGGREAYRP-EGLNAAFGMQADGQYNLSETQAQEILQMRLQRLTGLE 479
Query: 472 QKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI 531
Q KII +Y V+ ++ DL DIL+ +RI IIT+EL +K ++G + RRS+I LNA
Sbjct: 480 QDKIIGEYREVMAQIADLLDILARPERITTIITEELTAVKAEFG----DARRSKIELNAT 535
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANT
Sbjct: 536 ELNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANT 595
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HDYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ R+F
Sbjct: 596 HDYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----REFSA 651
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
+ YVFM+TSLG VKKT L FS P K GIIAV L + DFLIGA++TDG +D+MLFSDSGK
Sbjct: 652 DKYVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDDGDFLIGASITDGEHDVMLFSDSGK 711
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
AVRF+EN VR MGR ARGV GM+LE Q+VIA+LV+ ++QSVLTATENGYGKRT I EY
Sbjct: 712 AVRFDENDVRPMGREARGVRGMQLEDGQQVIAMLVAGGEEQSVLTATENGYGKRTPITEY 771
Query: 772 TKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQG 831
T+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQG
Sbjct: 772 TRHGRGTKGVIAIQTSERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQG 831
Query: 832 VILITVENKSKLCGVQRL 849
V LI+++ +KL G+Q++
Sbjct: 832 VTLISLDEGTKLSGLQQI 849
>gi|330815890|ref|YP_004359595.1| GyrA protein [Burkholderia gladioli BSR3]
gi|327368283|gb|AEA59639.1| GyrA protein [Burkholderia gladioli BSR3]
Length = 871
Score = 1176 bits (3041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/860 (64%), Positives = 693/860 (80%), Gaps = 18/860 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL+D+DKET+DF NYDG E EP +LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLVDIDKETVDFGPNYDGSESEPLILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EV+D ++L NP+ SI++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLSEVVDACHHLLANPQASIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R A+I+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRATTHFEEIDRGQRMAVIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKSTQLQDTFGMNMVALVDGQPKLLNLKEMLECFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID+FI++I++ TP A+ +++ +W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDDFIELIKAAPTPPIARQELMARSWDSSLV 420
Query: 421 SKIIGF---------NKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNME 471
+++ ++ Y +N +Q + Y LS+ QAQEIL+M LQRLT +E
Sbjct: 421 REMLARAEAENAAAGGREAYRP-EGLNPAFGMQADGKYNLSETQAQEILQMRLQRLTGLE 479
Query: 472 QKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI 531
Q KII +Y V+ ++ DL DIL+ +RI II +EL +K+++G + RRS I LNA
Sbjct: 480 QDKIIGEYREVMAQIADLLDILARPERITTIIGEELTAVKSEFG----DARRSRIELNAT 535
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANT
Sbjct: 536 ELNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANT 595
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HDYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F
Sbjct: 596 HDYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSA 651
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
+ YVFM TSLG VKKT L FS P K GIIAV L DFLIGAA+TDG +D+MLFSDSGK
Sbjct: 652 DKYVFMGTSLGTVKKTPLEAFSRPLKKGIIAVGLDEGDFLIGAAITDGEHDVMLFSDSGK 711
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
AVRF+EN VR MGR ARGV GM+LE Q+VIA+LV+ ++QSVLTATENGYGKRT I EY
Sbjct: 712 AVRFDENDVRPMGREARGVRGMQLEDGQQVIAMLVAGGEEQSVLTATENGYGKRTPITEY 771
Query: 772 TKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQG 831
T+H RGTKG+I+I+T++RNGKVVAATLV EIMLITT G+LIRTRVSEIR+MGR+TQG
Sbjct: 772 TRHGRGTKGMIAIQTSERNGKVVAATLVEPESEIMLITTAGVLIRTRVSEIREMGRATQG 831
Query: 832 VILITVENKSKLCGVQRLCK 851
V LI+++ ++L G+Q++ +
Sbjct: 832 VTLISLDEGTRLSGLQQIAE 851
>gi|89900363|ref|YP_522834.1| DNA gyrase subunit A [Rhodoferax ferrireducens T118]
gi|89345100|gb|ABD69303.1| DNA gyrase subunit A [Rhodoferax ferrireducens T118]
Length = 880
Score = 1175 bits (3040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/858 (64%), Positives = 690/858 (80%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + + LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL DLDKET+DF NYDG EKEP VLPTR+PNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADLDKETVDFGPNYDGSEKEPLVLPTRLPNLLVNGSGGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NPE SI++L++IIPAPDFPTAGIIYG+ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHLLRNPEASIDELMEIIPAPDFPTAGIIYGIQGVKDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R +II+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKVHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+AL++GQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALIDGQPKLCNLKDLIKVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F LRKARE H+LEGL +AL NID FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFNLRKARERGHVLEGLAVALANIDEFIAIIRNAPTPPVAKVELMAKPWDSKLV 420
Query: 421 SKIIGFNKKNYNTISK-------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + I+ + + + ++ +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVINADDYRPDGLEKMYGMGSDGLYRLSDTQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ ++ DL DIL+ S+R+ II +EL IK ++G K RRS + ++ +
Sbjct: 481 KIVAEYKEVMGEIEDLLDILAKSERVSTIIYEELTAIKTEFGQTKLGARRSLVEHSSFDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DW++QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHSGYIKSQPLSEYRAQKRGGRGKQATATKEDDWVDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++PQGSR SRG+PI+NMF L+ EKI V+L L+ KR FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPQGSRGSRGRPIVNMFPLQEGEKINVVLALTGEKRSFPADQ 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L FSNPRK GIIAV L D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATSMGTVKKTPLDEFSNPRKGGIIAVGLDEGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM LE Q VIA+LV+ ++ QSVLTAT NGYGKRT I EYT+
Sbjct: 721 RFDENDVRPMGRNARGVRGMMLEDGQGVIAMLVAEDELQSVLTATVNGYGKRTSITEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAITQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ SKL G+QR+ +
Sbjct: 841 LIGLDEGSKLSGLQRIVE 858
>gi|107022118|ref|YP_620445.1| DNA gyrase subunit A [Burkholderia cenocepacia AU 1054]
gi|105892307|gb|ABF75472.1| DNA gyrase subunit A [Burkholderia cenocepacia AU 1054]
Length = 867
Score = 1175 bits (3039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/857 (64%), Positives = 694/857 (80%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD+++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDIAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +PSVLP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFEPNYDGNEMQPSVLPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLGNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKPWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAESENAAAGGRSAYRPEGLNPAFGMQTDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQIADLLDILARPERITTMIGDELTSVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++FM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSD+GKA
Sbjct: 653 KFIFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIA+LV+ +++Q+VLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIAMLVAGSEEQTVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSE+R+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEVREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|206561292|ref|YP_002232057.1| DNA gyrase subunit A [Burkholderia cenocepacia J2315]
gi|198037334|emb|CAR53261.1| DNA Gyrase, subunit A [Burkholderia cenocepacia J2315]
Length = 867
Score = 1174 bits (3038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/857 (64%), Positives = 692/857 (80%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +PSVLP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFEPNYDGNEMQPSVLPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLGNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKPWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAESENAAAGGRSAYRPEGLNPAFGMQADGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I +EL +K ++G + RRS I LNA
Sbjct: 481 DKIIGEYRDVMAQIADLLDILARPERITTMIGEELTAVKAEFG----DARRSRIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++FM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSDSGKA
Sbjct: 653 KFIFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDSGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIALLV+ +++Q+VLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIALLVAGSEEQTVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|113866815|ref|YP_725304.1| DNA gyrase subunit A [Ralstonia eutropha H16]
gi|113525591|emb|CAJ91936.1| DNA gyrase subunit A [Ralstonia eutropha H16]
Length = 888
Score = 1174 bits (3037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/867 (63%), Positives = 694/867 (80%), Gaps = 25/867 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDPFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF SNYDG EKEPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLFDIDKETVDFDSNYDGSEKEPSILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++DG L++L NP+ ++++LI++IPAPDFPTAGIIYG+ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEIVDGCLHLLRNPQATVDELIELIPAPDFPTAGIIYGIQGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EKK+E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKKIEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN LYK TQLQ+TFGMNM+ALV+ QP+LLNL+++L YF+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLYKNTQLQDTFGMNMVALVDRQPRLLNLRQMLEYFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKAWDSALV 420
Query: 421 SKIIGF-------NKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + +Y + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLARAEGETPGGRASYRP-DGLPPVFGMQADGLYRLSDGQAQEILQMRLQRLTGLEQD 479
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y +++ + DL DIL+ +RI II DEL I+ ++G RRS+I LNA
Sbjct: 480 KIVQEYRDIMAVITDLLDILARPERITAIIVDELTAIRAEFGDE----RRSQIELNATEL 535
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLI QDMV+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTHD
Sbjct: 536 DTEDLITPQDMVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHD 595
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKV+++PQGSRNSRG+PI+NMF L EKI VILP+ + F +
Sbjct: 596 YILCFSNRGRLYWLKVYEVPQGSRNSRGRPIVNMFPLSEGEKINVILPV----KQFDAEH 651
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
++FM+T+ G VKKT L+ FSNPRK+GIIAV+L D+LIGAA+TDG +D+MLFSD+GKAV
Sbjct: 652 FIFMATARGTVKKTALTEFSNPRKAGIIAVDLDEGDYLIGAAVTDGQHDVMLFSDAGKAV 711
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLV---------SNNQKQSVLTATENGYGK 764
RF+EN VR MGR ARGV GM LE Q VIA+LV + SVLTATENGYGK
Sbjct: 712 RFDENDVRPMGRQARGVRGMNLEDGQTVIAMLVAPAETAEEAEAGMRGSVLTATENGYGK 771
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT I EYT+H RGTKG+I+I+T++RNG+VVAA LV+ EIMLITTGG+LIRTRV+EIR+
Sbjct: 772 RTPIAEYTRHGRGTKGMIAIQTSERNGRVVAAALVSPEDEIMLITTGGVLIRTRVAEIRE 831
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCK 851
MGR+TQGV LI V+ +KL G+QR+ +
Sbjct: 832 MGRATQGVTLINVDEGTKLSGLQRIVE 858
>gi|254252934|ref|ZP_04946252.1| DNA gyrase subunit A [Burkholderia dolosa AUO158]
gi|124895543|gb|EAY69423.1| DNA gyrase subunit A [Burkholderia dolosa AUO158]
Length = 867
Score = 1174 bits (3037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/859 (64%), Positives = 692/859 (80%), Gaps = 16/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +PSVLP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFEPNYDGNETQPSVLPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L NP+ ++++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLSNPDATVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMTKSWDSSLV 420
Query: 421 SKIIGFNKKNYNTISK--------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAESENAAAGGRAAYRPEGLNPAYGMQADGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS I LNA
Sbjct: 481 DKIIGEYREVMAQIADLLDILARPERITTMIGDELTTVKAEFG----DARRSRIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DY+LCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F +
Sbjct: 597 DYMLCFSNRGRVYWIKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSDSGKA
Sbjct: 653 KFVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDSGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIALLV+ +++QSVLTATENG+GKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIALLVAGSEEQSVLTATENGFGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRLCK 851
LI+++ +KL G+Q++ +
Sbjct: 833 TLISLDEGTKLSGLQQIAE 851
>gi|422322107|ref|ZP_16403149.1| DNA gyrase subunit A [Achromobacter xylosoxidans C54]
gi|317402978|gb|EFV83517.1| DNA gyrase subunit A [Achromobacter xylosoxidans C54]
Length = 889
Score = 1174 bits (3036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/856 (63%), Positives = 695/856 (81%), Gaps = 10/856 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG LY L NP CS+++L++IIPAPDFPT G+IYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLQEVVDGCLYCLRNPACSVDELMEIIPAPDFPTGGVIYGMSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ + NR AI++D +PYQVNKK+L E+I++LV +KK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQMIDYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMAKSWDSSLV 420
Query: 421 SKIIG---FNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + +++ LQ + +Y+LSD QAQEIL M LQRLT +EQ K
Sbjct: 421 REMLSRADGDTPGGRAAFRPDDLGAEFGLQGDGLYRLSDTQAQEILNMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+ +Y++++ + DL DIL+ +RI II +EL IK ++ + K+ RRSEI LNA
Sbjct: 481 IVGEYKDIMSTIADLLDILARPERITTIIGEELQAIKAEFSTGAKDTRRSEIELNATELD 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A K+ DWI+QLFIANTHD+
Sbjct: 541 TEDLITPTDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATAMKENDWIDQLFIANTHDF 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L EKITV+LP+ ++F +++Y
Sbjct: 601 LLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLAEGEKITVVLPV----KEFSEDHY 656
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT LS+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSD+GKAVR
Sbjct: 657 VFMATSRGTVKKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVR 716
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE Q VIALLV+ ++ QSVLTATENGYGKRT I EYT+H
Sbjct: 717 FDENDVRPMGRNARGVRGMMLEDTQNVIALLVAGDETQSVLTATENGYGKRTPITEYTRH 776
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T+ RNGKVV A LV EIMLITTGG+L+RTRV+EIR+MGR+TQGV L
Sbjct: 777 GRGTKGMIAIQTSSRNGKVVGAVLVMPSDEIMLITTGGVLVRTRVAEIREMGRATQGVTL 836
Query: 835 ITVENKSKLCGVQRLC 850
I V++ S L GV+R+
Sbjct: 837 INVDDGSSLSGVRRVV 852
>gi|116689063|ref|YP_834686.1| DNA gyrase subunit A [Burkholderia cenocepacia HI2424]
gi|116647152|gb|ABK07793.1| DNA gyrase subunit A [Burkholderia cenocepacia HI2424]
Length = 867
Score = 1174 bits (3036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/857 (64%), Positives = 693/857 (80%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +PSVLP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFEPNYDGNEMQPSVLPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLGNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKPWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAESENAAAGGRSAYRPEGLNPAFGMQTDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQIADLLDILARPERITTMIGDELTSVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++FM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSD+GKA
Sbjct: 653 KFIFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIA+LV+ +++Q+VLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIAMLVAGSEEQTVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSE+R+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEVREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|407714402|ref|YP_006834967.1| DNA gyrase subunit A [Burkholderia phenoliruptrix BR3459a]
gi|407236586|gb|AFT86785.1| DNA gyrase subunit A [Burkholderia phenoliruptrix BR3459a]
Length = 878
Score = 1174 bits (3036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/859 (64%), Positives = 695/859 (80%), Gaps = 16/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFTPNYDGSENEPAILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLKNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRALTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLSRAETENASAGGRDAYRPDGLNPSFGMQADGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI II DEL IK ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQIADLLDILARPERITAIIVDELTSIKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI Q+MV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTH
Sbjct: 537 LNTEDLITPQEMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATSMKEDDWIDTLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D+ILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKITV+LP+ ++F +
Sbjct: 597 DHILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKITVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM+T+LG VKKT L FS P + GIIAV L + D+LIGAA+TDG +D+MLFSDSGKA
Sbjct: 653 KFVFMATALGTVKKTPLEAFSRPLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q VIALLV+ +++QSVLTATENG+GKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDPEAQIMLITTTGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRLCK 851
LI+++ +KL G+Q++ +
Sbjct: 833 TLISLDEGTKLSGLQQVAE 851
>gi|161609265|ref|NP_890006.2| DNA gyrase subunit A [Bordetella bronchiseptica RB50]
gi|161610385|ref|NP_885309.2| DNA gyrase subunit A [Bordetella parapertussis 12822]
Length = 893
Score = 1173 bits (3035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/857 (63%), Positives = 701/857 (81%), Gaps = 10/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG LY L NPECSI++LI++IPAPDFPT G+IYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLQEVVDGCLYCLRNPECSIDELIELIPAPDFPTGGVIYGITGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ + NR AI++D +PYQVNKK+L E+I++LV +KK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIEYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARSWDSSLV 420
Query: 421 SKIIG---FNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + ++++ LQ + Y+LS+ QAQEIL M LQRLT +EQ K
Sbjct: 421 REMLARVDGDAAGGVAAFRPDDLAPEYGLQGDGNYRLSETQAQEILNMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
II +Y++V+ + DL DIL+ +RI II++EL IK ++ + K+ RR+EI +NA
Sbjct: 481 IIGEYKDVMATIADLLDILARPERITTIISEELQAIKAEFSTSAKDTRRAEIEVNATELD 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A K+ DW++QLFIANTHDY
Sbjct: 541 TEDLITPMDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATAMKENDWVDQLFIANTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L + EK+TV+LP+ ++F +++Y
Sbjct: 601 LLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKVTVVLPV----KEFSEDHY 656
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT LS+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSD+GKAVR
Sbjct: 657 VFMATSRGTVKKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVR 716
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE+ Q VIALLV+ ++ QSVLTATENGYGKRT I EYT+H
Sbjct: 717 FDENDVRPMGRNARGVRGMMLEEGQTVIALLVAGDETQSVLTATENGYGKRTPITEYTRH 776
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T+ RNG+VV A LV EIMLITTGG+L+RTRV+EIR+MGR+TQGV L
Sbjct: 777 GRGTKGMIAIQTSSRNGRVVGAVLVMPSDEIMLITTGGVLVRTRVAEIREMGRATQGVTL 836
Query: 835 ITVENKSKLCGVQRLCK 851
I+V++ S L GV+R+ +
Sbjct: 837 ISVDDGSSLSGVRRVVE 853
>gi|134295072|ref|YP_001118807.1| DNA gyrase subunit A [Burkholderia vietnamiensis G4]
gi|134138229|gb|ABO53972.1| DNA gyrase subunit A [Burkholderia vietnamiensis G4]
Length = 867
Score = 1173 bits (3035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/857 (64%), Positives = 694/857 (80%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +PSVLP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFEPNYDGNETQPSVLPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L+NP +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLNNPGATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI+II++ TP AK ++E +W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIEIIKAAPTPPIAKQGLMERSWDSSLV 420
Query: 421 SKIIGFNKKNYNTISK--------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLARAETENAAAGGRAAYRPEGLNPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y V+ ++ DL DIL+ +RI +I +EL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYREVMAQIADLLDILARPERITTMIGEELTSVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM+TSLG VKKT L FS P K GIIAV L + DFLIGA++TDG++D+MLFSD+GKA
Sbjct: 653 KFVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDDGDFLIGASITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIA+LV+ +++Q+VLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIAMLVAGSEEQTVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|33592101|ref|NP_879745.1| DNA gyrase subunit A [Bordetella pertussis Tohama I]
gi|384203403|ref|YP_005589142.1| DNA gyrase subunit A [Bordetella pertussis CS]
gi|33571745|emb|CAE41246.1| DNA gyrase subunit A [Bordetella pertussis Tohama I]
gi|332381517|gb|AEE66364.1| DNA gyrase subunit A [Bordetella pertussis CS]
Length = 893
Score = 1173 bits (3035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/857 (63%), Positives = 700/857 (81%), Gaps = 10/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG LY L NPECSI++LI++IPAPDFPT G+IYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLQEVVDGCLYCLRNPECSIDELIELIPAPDFPTGGVIYGITGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ + NR AI++D +PYQVNKK+L E+I++LV +KK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIEYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARSWDSSLV 420
Query: 421 SKIIG---FNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + ++++ LQ + Y+LS+ QAQEIL M LQRLT +EQ K
Sbjct: 421 REMLARVDGDAAGGVAAFRPDDLAPEYGLQGDGNYRLSETQAQEILNMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
II +Y++V+ + DL DIL+ RI II++EL IK ++ + K+ RR+EI +NA
Sbjct: 481 IIGEYKDVMATIADLLDILARPDRITTIISEELQAIKAEFSTSAKDTRRAEIEVNATELD 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A K+ DW++QLFIANTHDY
Sbjct: 541 TEDLITPMDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATAMKENDWVDQLFIANTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L + EK+TV+LP+ ++F +++Y
Sbjct: 601 LLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKVTVVLPV----KEFSEDHY 656
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT LS+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSD+GKAVR
Sbjct: 657 VFMATSRGTVKKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVR 716
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE+ Q VIALLV+ ++ QSVLTATENGYGKRT I EYT+H
Sbjct: 717 FDENDVRPMGRNARGVRGMMLEEGQTVIALLVAGDETQSVLTATENGYGKRTPITEYTRH 776
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T+ RNG+VV A LV EIMLITTGG+L+RTRV+EIR+MGR+TQGV L
Sbjct: 777 GRGTKGMIAIQTSSRNGRVVGAVLVMPSDEIMLITTGGVLVRTRVAEIREMGRATQGVTL 836
Query: 835 ITVENKSKLCGVQRLCK 851
I+V++ S L GV+R+ +
Sbjct: 837 ISVDDGSSLSGVRRVVE 853
>gi|408415243|ref|YP_006625950.1| DNA gyrase subunit A [Bordetella pertussis 18323]
gi|401777413|emb|CCJ62708.1| DNA gyrase subunit A [Bordetella pertussis 18323]
Length = 905
Score = 1173 bits (3035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/857 (63%), Positives = 700/857 (81%), Gaps = 10/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG LY L NPECSI++LI++IPAPDFPT G+IYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLQEVVDGCLYCLRNPECSIDELIELIPAPDFPTGGVIYGITGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ + NR AI++D +PYQVNKK+L E+I++LV +KK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIEYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARSWDSSLV 420
Query: 421 SKIIG---FNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + ++++ LQ + Y+LS+ QAQEIL M LQRLT +EQ K
Sbjct: 421 REMLARVDGDAAGGVAAFRPDDLAPEYGLQGDGNYRLSETQAQEILNMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
II +Y++V+ + DL DIL+ RI II++EL IK ++ + K+ RR+EI +NA
Sbjct: 481 IIGEYKDVMATIADLLDILARPDRITTIISEELQAIKAEFSTSAKDTRRAEIEVNATELD 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A K+ DW++QLFIANTHDY
Sbjct: 541 TEDLITPMDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATAMKENDWVDQLFIANTHDY 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L + EK+TV+LP+ ++F +++Y
Sbjct: 601 LLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKVTVVLPV----KEFSEDHY 656
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT LS+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSD+GKAVR
Sbjct: 657 VFMATSRGTVKKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVR 716
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE+ Q VIALLV+ ++ QSVLTATENGYGKRT I EYT+H
Sbjct: 717 FDENDVRPMGRNARGVRGMMLEEGQTVIALLVAGDETQSVLTATENGYGKRTPITEYTRH 776
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T+ RNG+VV A LV EIMLITTGG+L+RTRV+EIR+MGR+TQGV L
Sbjct: 777 GRGTKGMIAIQTSSRNGRVVGAVLVMPSDEIMLITTGGVLVRTRVAEIREMGRATQGVTL 836
Query: 835 ITVENKSKLCGVQRLCK 851
I+V++ S L GV+R+ +
Sbjct: 837 ISVDDGSSLSGVRRVVE 853
>gi|300704758|ref|YP_003746361.1| DNA gyrase subunit A [Ralstonia solanacearum CFBP2957]
gi|299072422|emb|CBJ43767.1| DNA gyrase, subunit A, type II topoisomerase [Ralstonia
solanacearum CFBP2957]
Length = 885
Score = 1173 bits (3035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/868 (63%), Positives = 695/868 (80%), Gaps = 27/868 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL D+DKET+DF NYDG E EPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADIDKETVDFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NPE ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLREVVDGCLHLLRNPEATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRSWDSGLV 420
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ +T+ + + +Q + +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 RDML--SRAESDTVGGRTAYRPEGLLPVFGMQGDGLYKLSDTQAQEILQMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+ +Y V+ ++ DL DIL+ +RI II +EL +I++++G RRS+I NA
Sbjct: 479 DKIVQEYREVMAQIADLLDILARPERITAIIVEELTLIRSEFGDE----RRSQIEHNATE 534
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTH
Sbjct: 535 LDTEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTH 594
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F +
Sbjct: 595 DYILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQ 650
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKA
Sbjct: 651 HFVFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKA 710
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYG 763
VRF+EN VR MGR ARGV GM LE Q+VIA+LV+ + SVLTATENGYG
Sbjct: 711 VRFDENDVRPMGRQARGVRGMNLEDGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYG 770
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
KRT I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR
Sbjct: 771 KRTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIR 830
Query: 824 KMGRSTQGVILITVENKSKLCGVQRLCK 851
+MGR+TQGV LI V +KL G+QR+ +
Sbjct: 831 EMGRATQGVTLIAVGEGNKLSGLQRVVE 858
>gi|423016375|ref|ZP_17007096.1| DNA gyrase subunit A [Achromobacter xylosoxidans AXX-A]
gi|338780629|gb|EGP45034.1| DNA gyrase subunit A [Achromobacter xylosoxidans AXX-A]
Length = 886
Score = 1173 bits (3034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/856 (63%), Positives = 695/856 (81%), Gaps = 10/856 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG LY L NP C++++L++IIPAPDFPT GIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLQEVVDGCLYCLRNPACTVDELMEIIPAPDFPTGGIIYGMSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTH E+ + NR AI++D +PYQVNKK+L E+I++LV +KK+E IS++RDESDK G
Sbjct: 241 IMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQMIDYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMAKSWDSSLV 420
Query: 421 SKIIG---FNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + +++ LQ + +Y+LSD QAQEIL M LQRLT +EQ K
Sbjct: 421 REMLSRADGDTPGGRAAFRPDDLGAEFGLQGDGLYRLSDTQAQEILNMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+ +Y++V+ + DL DIL+ +RI II +EL IK ++ + K+ RRS+I LNA
Sbjct: 481 IVGEYKDVMSAIADLLDILARPERITTIIGEELQAIKAEFSTGAKDTRRSDIELNATELD 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A K+ DWI+QLFIANTHD+
Sbjct: 541 TEDLITPTDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATAMKENDWIDQLFIANTHDF 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+LCFSN GR+YWLKVW++PQG+RNSRGKPI+NMF L EKITV+LP+ ++F +++Y
Sbjct: 601 LLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLAEGEKITVVLPV----KEFSEDHY 656
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT LS+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSD+GKAVR
Sbjct: 657 VFMATSRGTVKKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVR 716
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR+ARGV GM LE Q VIALLV+ ++ QSVLTATENGYGKRT I EYT+H
Sbjct: 717 FDENDVRPMGRNARGVRGMMLEDTQNVIALLVAGDETQSVLTATENGYGKRTPITEYTRH 776
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T+ RNGKVV A LV EIMLITTGG+L+RTRV+EIR+MGR+TQGV L
Sbjct: 777 GRGTKGMIAIQTSSRNGKVVGAVLVMPSDEIMLITTGGVLVRTRVAEIREMGRATQGVTL 836
Query: 835 ITVENKSKLCGVQRLC 850
I V++ S L GV+R+
Sbjct: 837 INVDDGSSLSGVRRVV 852
>gi|430806107|ref|ZP_19433222.1| DNA gyrase subunit A [Cupriavidus sp. HMR-1]
gi|429501640|gb|EKZ99970.1| DNA gyrase subunit A [Cupriavidus sp. HMR-1]
Length = 897
Score = 1173 bits (3034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/873 (63%), Positives = 698/873 (79%), Gaps = 31/873 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG EKEP +LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLQDIDKETVDFEPNYDGSEKEPGILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NP+ ++++LI+++PAPDFPTAGIIYG+ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHLLRNPDATVDELIELVPAPDFPTAGIIYGIQGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH E+ +R R AII+DELPYQVNK++LLE+I++LV EKK+E IS++RDESDKSG
Sbjct: 241 VMRARTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKKVEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLDAFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMSKPWDSGLV 420
Query: 421 SKII-------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + +Y + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLARAESDTAGGRASYRP-DGLPAVFGMQPDGLYRLSDGQAQEILQMRLQRLTGLEQD 479
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y V+ + DL DIL+ +RI IITDEL I+ ++G RRS+I LNA
Sbjct: 480 KIVQEYREVMGLIADLLDILARPERIATIITDELGAIRAEFGDE----RRSQIELNATEL 535
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLI QDMV+TLS+ GY+KSQPISEYRAQKRGGRGK A TK++DWI+ LF+ANTHD
Sbjct: 536 DTEDLITPQDMVVTLSHSGYMKSQPISEYRAQKRGGRGKLATATKEDDWIDTLFVANTHD 595
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKV+++PQGSRNSRG+PI+NMF L + EKI VILP+ R F +
Sbjct: 596 YILCFSNRGRLYWLKVYEVPQGSRNSRGRPIVNMFPLADGEKINVILPV----RQFDAEH 651
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
++FM+T+ G VKKT+L++FSNPRK+GIIAV+L DFLIGAA+TDG +D+MLFSD+GKAV
Sbjct: 652 FIFMATARGTVKKTVLTDFSNPRKAGIIAVDLDEGDFLIGAAVTDGQHDVMLFSDAGKAV 711
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------------SVLTAT 758
RF+EN VR MGR ARGV GM L++ Q VIA+LV+ + SVLTAT
Sbjct: 712 RFDENDVRPMGRQARGVRGMNLDEGQAVIAMLVAPAESAETESSVAEGDMSPVGSVLTAT 771
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT I EYT+H RGTKG+I+I+T++RNG+VVAA LV+ EIMLITTGG+LIRTR
Sbjct: 772 ENGYGKRTPISEYTRHGRGTKGMIAIQTSERNGRVVAAALVSPEDEIMLITTGGVLIRTR 831
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
V+EIR+MGR+TQGV LI V+ +KL G+QR+ +
Sbjct: 832 VAEIREMGRATQGVTLINVDEGTKLSGLQRIVE 864
>gi|398804890|ref|ZP_10563874.1| DNA gyrase, A subunit [Polaromonas sp. CF318]
gi|398092818|gb|EJL83223.1| DNA gyrase, A subunit [Polaromonas sp. CF318]
Length = 882
Score = 1172 bits (3033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/858 (63%), Positives = 698/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSLRHLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL DLDKET+DF NYDG E+EP V+PTR+PNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADLDKETVDFGPNYDGSEQEPLVVPTRLPNLLVNGSGGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NPE SI++L++I+PAPDFPT GIIYG++ V DGY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHMLKNPEASIDELMEIVPAPDFPTGGIIYGINGVKDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R +II+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALVNGQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVNGQPKLCNLKDLIQVFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVYTLRKARERGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMLRPWDSSLV 420
Query: 421 SKIIGFNKKNYNTISK-------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + + ++ +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGIVNADDYRPDGLEKMFGMGSDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ ++ DL DIL+ +R+ II +EL+ IK ++G K RRS I ++ +
Sbjct: 481 KIVAEYKEVMAEIDDLLDILAKPERVSIIIGEELSAIKLEFGQTKLGARRSHIEHSSFDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TKD+DW++QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKDDDWVDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L+ EKITV+LPL+ +KR FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKITVVLPLTGDKRSFPADQ 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L FSNPRK+GIIAV+L D+LIGA+LTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATSMGTVKKTALDEFSNPRKAGIIAVDLDPGDYLIGASLTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM LE Q VIA+LV+ +++QSVLTAT+NG+GKRT I EYT+
Sbjct: 721 RFDENDVRPMGRNARGVRGMTLEDGQGVIAMLVAEDEQQSVLTATQNGFGKRTSITEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR+MGR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHVDDEIMLITDKGVLVRTRVSEIREMGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ S+L G+QR+ +
Sbjct: 841 LIGLDEGSQLSGLQRIVE 858
>gi|194288904|ref|YP_002004811.1| DNA gyrase subunit a [Cupriavidus taiwanensis LMG 19424]
gi|193222739|emb|CAQ68742.1| DNA gyrase, subunit A, type II topoisomerase [Cupriavidus
taiwanensis LMG 19424]
Length = 892
Score = 1172 bits (3033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/868 (63%), Positives = 698/868 (80%), Gaps = 26/868 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDPFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF SNYDG EKEPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLHDIDKETVDFDSNYDGSEKEPSILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++DG L++L NP+ ++++LI++IPAPDFPTAGIIYG+ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEIVDGCLHLLRNPQATVDELIELIPAPDFPTAGIIYGIQGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EKK+E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKKIEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN LYK TQLQ+TFGMNM+ALV+ QP+LLNL+++L YF+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLYKNTQLQDTFGMNMVALVDRQPRLLNLRQMLEYFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMSKAWDSALV 420
Query: 421 SKIIG-------FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + +Y + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLARAEGETPGGRASYRP-DGLPAVFGMQPDGLYRLSDGQAQEILQMRLQRLTGLEQD 479
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y +++ ++ DL DIL+ +RI II DEL I+ ++G RRS+I LNA
Sbjct: 480 KIVQEYRDIMAEIADLLDILARPERITTIIIDELTAIRAEFGDE----RRSQIELNATEL 535
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLI QDMV+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTHD
Sbjct: 536 DTEDLITPQDMVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHD 595
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKV+++PQGSRNSRG+PI+NMF L EKI VILP+ R F +
Sbjct: 596 YILCFSNRGRLYWLKVYEVPQGSRNSRGRPIVNMFPLSEGEKINVILPV----RQFDAEH 651
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
++FM+T+ G VKKT L+ FSNPRK+GIIAV+L D+LIGAA+TDG +D+MLFSD+GKAV
Sbjct: 652 FIFMATARGTVKKTALTEFSNPRKAGIIAVDLDEGDYLIGAAVTDGQHDVMLFSDAGKAV 711
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQ----------KQSVLTATENGYG 763
RF+EN VR MGR ARGV GM LE+ Q VIA+LV+ + + SVLTATENGYG
Sbjct: 712 RFDENDVRPMGRQARGVRGMNLEEGQAVIAMLVAPAETAEEAADAGVRGSVLTATENGYG 771
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
KRT I EYT+H RGTKG+I+I+T++RNG+VVAA LV+ EIMLITTGG+LIRTRV+EIR
Sbjct: 772 KRTPIAEYTRHGRGTKGMIAIQTSERNGRVVAAALVSPEDEIMLITTGGVLIRTRVAEIR 831
Query: 824 KMGRSTQGVILITVENKSKLCGVQRLCK 851
+MGR+TQGV LI V+ +KL G+QR+ +
Sbjct: 832 EMGRATQGVTLINVDEGTKLSGLQRIVE 859
>gi|264677567|ref|YP_003277473.1| DNA gyrase subunit alpha [Comamonas testosteroni CNB-2]
gi|262208079|gb|ACY32177.1| DNA gyrase, A subunit [Comamonas testosteroni CNB-2]
Length = 898
Score = 1172 bits (3033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/867 (62%), Positives = 699/867 (80%), Gaps = 16/867 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG E+EP VLP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLGDIDKETVDFGPNYDGSEQEPLVLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NPE SI++L++IIPAPDFPTAGIIYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDGCLHLLQNPEASIDELMEIIPAPDFPTAGIIYGINGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R +II+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALVNGQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKLTQLQDTFGMNMVALVNGQPKLCNLKDLIQVFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ H+LEGL +AL NID+FI IIR+ TP AK ++E +W+ V
Sbjct: 361 VVTRRTVFELRKARDRGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAALMEKSWDSKLV 420
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + +Q N +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRTDGGVVNADDYRPEGLEVEFGMQQNGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ + DL DIL+ +R+ II +ELN +K ++G KK RRS + +A +
Sbjct: 481 KIVAEYKDVMSVIEDLLDILAKPERVSIIIGEELNAVKAEFGQSKKGERRSTVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRSQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
Y+LCFSN GR+YWLKVW++P GSR SRG+PI+NMF L+ EKI V+LPL+ R FP+++
Sbjct: 601 YLLCFSNRGRMYWLKVWEVPSGSRGSRGRPIVNMFPLQEGEKINVVLPLTGENRSFPEDH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
+VFM+TS+G VKKT L+ FSNPRK+GIIAV L D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 FVFMATSMGTVKKTALTEFSNPRKAGIIAVGLDEGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQ---------KQSVLTATENGYGK 764
RF+EN VR MGR+ARGV GM +E+ Q VIA+LV+ QSVLTATENGYGK
Sbjct: 721 RFDENDVRPMGRNARGVRGMNIEEHQNVIAMLVAEADDGTGNVVAGSQSVLTATENGYGK 780
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT I EYT+H RGTKG+I+I+ ++RNGKVVAATLV EIMLIT G+L+RTRV+EIR+
Sbjct: 781 RTAISEYTRHGRGTKGMIAIQQSERNGKVVAATLVAPEDEIMLITDTGVLVRTRVAEIRE 840
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCK 851
+GR+TQGV LI ++ +KL G+QR+ +
Sbjct: 841 LGRATQGVTLINLDEGAKLIGLQRIVE 867
>gi|326316784|ref|YP_004234456.1| DNA gyrase subunit A [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373620|gb|ADX45889.1| DNA gyrase, A subunit [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 884
Score = 1172 bits (3032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/858 (62%), Positives = 696/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L+VL +P+ +++++++IIPAPDFPTAGIIYG++ V +GY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHVLRHPDATVDEIMEIIPAPDFPTAGIIYGINGVKEGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRARCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALV+GQP+L NL++++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPRLCNLRDLIVVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI+IIR + TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIRIIRESPTPPIAKTELMNRAWDSQLV 420
Query: 421 SKIIGFNKKNYNTISK-------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVVNADDYRPEGLEREYGMGQDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++++ + DL DILS +R+ II DEL IK ++G HK +RR+ + +A +
Sbjct: 481 KIVAEYKDIMAVIEDLLDILSKPERVSVIIGDELTAIKAEFGQHKLGMRRTLVEHSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L+ EKI V+LPL+ + R FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVVLPLTGDMRTFPADR 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
+VFM+TS+G VKKT L FSNPRK GIIAVNL + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 FVFMATSMGTVKKTALDEFSNPRKGGIIAVNLDDGDYLIGAALTDGQHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR +GR+ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPLGRAARGVRGMMLEDGQSVIAMLVAEDETQSVLTATENGYGKRTSIVEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRV+EIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHAEDEIMLITDKGVLVRTRVAEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ +KL G+QR+ +
Sbjct: 841 LIALDEGAKLSGLQRIVE 858
>gi|167581047|ref|ZP_02373921.1| DNA gyrase subunit A [Burkholderia thailandensis TXDOH]
Length = 866
Score = 1172 bits (3032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/857 (64%), Positives = 696/857 (81%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D LY+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLYLLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSSLV 420
Query: 421 SKIIGFNKKNYNTISK--------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + ++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAEAENAAAGGRAAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I +EL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQIADLLDILARPERITVMIGEELAAVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+T+LG VKKT L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKA
Sbjct: 653 KYVFMTTALGTVKKTPLEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLDDGQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGRVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|299532465|ref|ZP_07045856.1| DNA gyrase subunit A [Comamonas testosteroni S44]
gi|298719550|gb|EFI60516.1| DNA gyrase subunit A [Comamonas testosteroni S44]
Length = 898
Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/867 (62%), Positives = 698/867 (80%), Gaps = 16/867 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG E EP VLP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLGDIDKETVDFGPNYDGSESEPLVLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NPE SI++L++IIPAPDFPTAGIIYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDGCLHLLQNPEASIDELMEIIPAPDFPTAGIIYGINGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R +II+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALVNGQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKLTQLQDTFGMNMVALVNGQPKLCNLKDLIQVFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ H+LEGL +AL NID+FI IIR+ TP AK ++E +W+ V
Sbjct: 361 VVTRRTVFELRKARDRGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAALMEKSWDSKLV 420
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + +Q N +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRTDGGVVNADDYRPEGLEVEFGMQQNGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ + DL DIL+ +R+ II +ELN +K ++G KK RRS + +A +
Sbjct: 481 KIVAEYKDVMSVIEDLLDILAKPERVSIIIGEELNAVKAEFGQSKKGERRSTVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRSQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
Y+LCFSN GR+YWLKVW++P GSR SRG+PI+NMF L+ EKI V+LPL+ R FP+++
Sbjct: 601 YLLCFSNRGRMYWLKVWEVPSGSRGSRGRPIVNMFPLQEGEKINVVLPLTGENRSFPEDH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
+VFM+TS+G VKKT L+ FSNPRK+GIIAV L D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 FVFMATSMGTVKKTALTEFSNPRKAGIIAVGLDEGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQ---------KQSVLTATENGYGK 764
RF+EN VR MGR+ARGV GM +E+ Q VIA+LV+ QSVLTATENGYGK
Sbjct: 721 RFDENDVRPMGRNARGVRGMNIEEHQNVIAMLVAEADDGTGNVVAGSQSVLTATENGYGK 780
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT I EYT+H RGTKG+I+I+ ++RNGKVVAATLV EIMLIT G+L+RTRV+EIR+
Sbjct: 781 RTAISEYTRHGRGTKGMIAIQQSERNGKVVAATLVAPEDEIMLITDTGVLVRTRVAEIRE 840
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCK 851
+GR+TQGV LI ++ +KL G+QR+ +
Sbjct: 841 LGRATQGVTLINLDEGAKLIGLQRIVE 867
>gi|83720946|ref|YP_442169.1| DNA gyrase subunit A [Burkholderia thailandensis E264]
gi|257138358|ref|ZP_05586620.1| DNA gyrase subunit A [Burkholderia thailandensis E264]
gi|83654771|gb|ABC38834.1| DNA gyrase, A subunit [Burkholderia thailandensis E264]
Length = 866
Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/857 (64%), Positives = 696/857 (81%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D LY+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLYLLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSSLV 420
Query: 421 SKIIGFNKKNYNTISK--------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + ++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAEAENAAAGGRAAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I +EL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQIADLLDILARPERITVMIGEELAAVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+T+LG VKKT L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKA
Sbjct: 653 KYVFMTTALGTVKKTPLEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLDDGQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGRVVAATLVDTEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|395005344|ref|ZP_10389228.1| DNA gyrase, A subunit [Acidovorax sp. CF316]
gi|394316727|gb|EJE53437.1| DNA gyrase, A subunit [Acidovorax sp. CF316]
Length = 887
Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/858 (63%), Positives = 695/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLGDIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NP+ ++++L++IIPAPDFPTAGIIYG++ V DGY TG+G+V
Sbjct: 181 NIPPHNLNEVVDGCLHMLRNPDATVDELMEIIPAPDFPTAGIIYGINGVKDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+AL++GQP+L NL++++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALIDGQPRLCNLRDLISVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ H+LEGL +AL NID+FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARDRGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMARPWDSKLV 420
Query: 421 SKIIGFNKKNYNTIS----KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + +S + + + K + + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVVSADDYRPDGLEKEFGMGQDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ + DL DIL+ +R+ II +EL IK ++G K RRS + +A +
Sbjct: 481 KIVAEYKEVMSVIEDLLDILAKPERVSTIIGEELTSIKTEFGQSKLGARRSIVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRSQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L+ EKI V+L L+ + R FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVVLALTGDMRTFPADR 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L FSNPRK GIIAVNL + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATSMGTVKKTALDEFSNPRKGGIIAVNLDDGDYLIGAALTDGQHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR +GR ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPLGRQARGVRGMTLEDGQSVIAMLVAEDETQSVLTATENGYGKRTSIVEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ SKL G+QR+ +
Sbjct: 841 LIALDEGSKLSGLQRIVE 858
>gi|17545620|ref|NP_519022.1| DNA gyrase subunit A [Ralstonia solanacearum GMI1000]
gi|17427913|emb|CAD14603.1| probable dna gyrase (subunit a)(type II topoisomerase) protein
[Ralstonia solanacearum GMI1000]
Length = 885
Score = 1171 bits (3030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/868 (63%), Positives = 695/868 (80%), Gaps = 27/868 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL D+DKET+DF NYDG E EPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADIDKETVDFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NP+ ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLREVVDGCLHLLRNPDATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRIEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRNWDSGLV 420
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +T+ + + +Q +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REML--SRAESDTVGGRAAYRPEGLLPVFGMQEGGLYKLSDTQAQEILQMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+ +Y V+ ++ DL DIL+ +RI II +EL +I+ ++G RRS+I NA
Sbjct: 479 DKIVQEYREVMAQIADLLDILARPERITAIIVEELTLIRAEFGDE----RRSQIEHNATE 534
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTH
Sbjct: 535 LDTEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTH 594
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F +
Sbjct: 595 DYILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQ 650
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++VFM+TS G VKKT L+ FSNPRK+GIIAV+L + DFLIGA +TDG +D+MLFSD+GKA
Sbjct: 651 HFVFMATSKGTVKKTALTEFSNPRKAGIIAVDLDDGDFLIGADITDGQHDVMLFSDAGKA 710
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYG 763
VRF+EN VR MGR ARGV GM LE+ Q+VIA+LV+ + SVLTATENGYG
Sbjct: 711 VRFDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYG 770
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
KRT I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR
Sbjct: 771 KRTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIR 830
Query: 824 KMGRSTQGVILITVENKSKLCGVQRLCK 851
+MGR+TQGV LI V +KL G+QR+ +
Sbjct: 831 EMGRATQGVTLIAVGEGNKLSGLQRVVE 858
>gi|421888908|ref|ZP_16319983.1| DNA gyrase, subunit A, type II topoisomerase [Ralstonia
solanacearum K60-1]
gi|378965730|emb|CCF96731.1| DNA gyrase, subunit A, type II topoisomerase [Ralstonia
solanacearum K60-1]
Length = 885
Score = 1171 bits (3030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/868 (63%), Positives = 694/868 (79%), Gaps = 27/868 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL D+DKET+DF NYDG E EPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADIDKETVDFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NPE ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLREVVDGCLHLLRNPEATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRSWDSGLV 420
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ +T+ + + +Q + +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 RDML--SRAESDTVGGRTAYRPEGLLPVFGMQGDGLYKLSDTQAQEILQMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+ +Y V+ ++ DL DIL+ +RI II +EL +I++++G RRS+I NA
Sbjct: 479 DKIVQEYREVMAQIADLLDILARPERITAIIVEELTLIRSEFGDE----RRSQIEHNATE 534
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTH
Sbjct: 535 LDTEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTH 594
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F +
Sbjct: 595 DYILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQ 650
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKA
Sbjct: 651 HFVFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKA 710
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYG 763
VRF+EN VR MGR ARGV GM LE Q+VIA+LV+ + SVL ATENGYG
Sbjct: 711 VRFDENDVRPMGRQARGVRGMNLEDGQQVIAMLVAPAETAGEGEQAVAGSVLAATENGYG 770
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
KRT I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR
Sbjct: 771 KRTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIR 830
Query: 824 KMGRSTQGVILITVENKSKLCGVQRLCK 851
+MGR+TQGV LI V +KL G+QR+ +
Sbjct: 831 EMGRATQGVTLIAVGEGNKLSGLQRVVE 858
>gi|78065625|ref|YP_368394.1| DNA gyrase subunit A [Burkholderia sp. 383]
gi|77966370|gb|ABB07750.1| DNA gyrase subunit A [Burkholderia sp. 383]
Length = 867
Score = 1171 bits (3030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/857 (64%), Positives = 692/857 (80%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +PSVLP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFEPNYDGNEMQPSVLPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLGNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKAELMAKPWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAESENAAAGGRSAYRPEGLNPAFGMQVDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y V+ ++ DL DIL+ +RI +I +EL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYREVMAQIADLLDILARPERITTMIGEELTSVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++FM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSDSGKA
Sbjct: 653 KFIFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDSGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIALLV+ +++Q+VLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIALLVAGSEEQTVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQI 849
>gi|418530804|ref|ZP_13096724.1| DNA gyrase subunit A [Comamonas testosteroni ATCC 11996]
gi|371451883|gb|EHN64915.1| DNA gyrase subunit A [Comamonas testosteroni ATCC 11996]
Length = 899
Score = 1171 bits (3030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/867 (62%), Positives = 698/867 (80%), Gaps = 16/867 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG E EP VLP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLGDIDKETVDFGPNYDGSESEPLVLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NPE SI++L++IIPAPDFPTAGIIYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDGCLHLLQNPEASIDELMEIIPAPDFPTAGIIYGINGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R +II+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALVNGQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKLTQLQDTFGMNMVALVNGQPKLCNLKDLIQVFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ H+LEGL +AL NID+FI IIR+ TP AK ++E +W+ V
Sbjct: 361 VVTRRTVFELRKARDRGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAALMEKSWDSKLV 420
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + +Q N +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRTDGGVVNADDYRPEGLEVEFGMQQNGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ + DL DIL+ +R+ II +ELN +K ++G KK RRS + +A +
Sbjct: 481 KIVAEYKDVMSVIEDLLDILAKPERVSIIIGEELNAVKAEFGQSKKGERRSTVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRSQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
Y+LCFSN GR+YWLKVW++P GSR SRG+PI+NMF L+ EKI V+LPL+ R FP+++
Sbjct: 601 YLLCFSNRGRMYWLKVWEVPSGSRGSRGRPIVNMFPLQEGEKINVVLPLTGENRSFPEDH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
+VFM+TS+G VKKT L+ FSNPRK+GIIAV L D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 FVFMATSMGTVKKTALTEFSNPRKAGIIAVGLDEGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQ---------KQSVLTATENGYGK 764
RF+EN VR MGR+ARGV GM +E+ Q VIA+LV+ QSVLTATENGYGK
Sbjct: 721 RFDENDVRPMGRNARGVRGMNIEEHQNVIAMLVAEADDGTGNVVAGSQSVLTATENGYGK 780
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT I EYT+H RGTKG+I+I+ ++RNGKVVAATLV EIMLIT G+L+RTRV+EIR+
Sbjct: 781 RTAISEYTRHGRGTKGMIAIQQSERNGKVVAATLVAPEDEIMLITDTGVLVRTRVAEIRE 840
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCK 851
+GR+TQGV LI ++ +KL G+QR+ +
Sbjct: 841 LGRATQGVTLINLDEGAKLIGLQRIVE 867
>gi|172059975|ref|YP_001807627.1| DNA gyrase subunit A [Burkholderia ambifaria MC40-6]
gi|171992492|gb|ACB63411.1| DNA gyrase, A subunit [Burkholderia ambifaria MC40-6]
Length = 867
Score = 1171 bits (3030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/857 (64%), Positives = 692/857 (80%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P+VLP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFEPNYDGNEMQPAVLPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L+N E +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLNNSEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRATTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKPWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAETENASAGGRSAYRPEGLNPAFGMQTDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS I LNA
Sbjct: 481 DKIIGEYREVMAQIADLLDILARPERITTMIGDELTSVKAEFG----DARRSRIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSDSGKA
Sbjct: 653 KFVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDSGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIALLV+ +++Q+VLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIALLVAGSEEQTVLTATENGYGKRTPIAEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQV 849
>gi|94309658|ref|YP_582868.1| DNA gyrase subunit A [Cupriavidus metallidurans CH34]
gi|93353510|gb|ABF07599.1| DNA gyrase (type II topoisomerase), subunit A [Cupriavidus
metallidurans CH34]
Length = 897
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/873 (63%), Positives = 698/873 (79%), Gaps = 31/873 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG EKEP +LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLQDIDKETVDFEPNYDGSEKEPGILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NP+ ++++LI+++PAPDFPTAGIIYG+ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHLLRNPDATVDELIELVPAPDFPTAGIIYGIQGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH E+ +R R AII+DELPYQVNK++LLE+I++LV EKK+E IS++RDESDKSG
Sbjct: 241 VMRARTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKKVEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLDAFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMSKPWDSGLV 420
Query: 421 SKII-------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + +Y + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLARAESDTAGGRASYRP-DGLPAVFGMQPDGLYRLSDGQAQEILQMRLQRLTGLEQD 479
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y V+ + DL DIL+ +RI IIT+EL I+ ++G RRS+I LNA
Sbjct: 480 KIVQEYREVMGLIADLLDILARPERITTIITEELGAIRAEFGDE----RRSQIELNATEL 535
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLI QDMV+TLS+ GY+KSQPISEYRAQKRGGRGK A TK++DWI+ LF+ANTHD
Sbjct: 536 DTEDLITPQDMVVTLSHSGYMKSQPISEYRAQKRGGRGKLATATKEDDWIDTLFVANTHD 595
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKV+++PQGSRNSRG+PI+NMF L + EKI VILP+ R F +
Sbjct: 596 YILCFSNRGRLYWLKVYEVPQGSRNSRGRPIVNMFPLADGEKINVILPV----RQFDAEH 651
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
++FM+T+ G VKKT+L++FSNPRK+GIIAV+L DFLIGAA+TDG +D+MLFSD+GKAV
Sbjct: 652 FIFMATARGTVKKTVLTDFSNPRKAGIIAVDLDEGDFLIGAAVTDGQHDVMLFSDAGKAV 711
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------------SVLTAT 758
RF+EN VR MGR ARGV GM L++ Q VIA+LV+ + SVLTAT
Sbjct: 712 RFDENDVRPMGRQARGVRGMNLDEGQAVIAMLVAPAESAETESSVAEGDVSPVGSVLTAT 771
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT I EYT+H RGTKG+I+I+T++RNG+VVAA LV+ EIMLITTGG+LIRTR
Sbjct: 772 ENGYGKRTPISEYTRHGRGTKGMIAIQTSERNGRVVAAALVSPEDEIMLITTGGVLIRTR 831
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
V+EIR+MGR+TQGV LI V+ +KL G+QR+ +
Sbjct: 832 VAEIREMGRATQGVTLINVDEGTKLSGLQRIVE 864
>gi|115350970|ref|YP_772809.1| DNA gyrase subunit A [Burkholderia ambifaria AMMD]
gi|115280958|gb|ABI86475.1| DNA gyrase subunit A [Burkholderia ambifaria AMMD]
Length = 867
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/857 (64%), Positives = 691/857 (80%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P+VLP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFEPNYDGNEMQPAVLPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L+N E +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLNNSEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRATTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKPWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAETENASAGGRSAYRPEGLNPAFGMQTDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS I LNA
Sbjct: 481 DKIIGEYREVMAQIADLLDILARPERITTMIGDELTSVKAEFG----DARRSRIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSDSGKA
Sbjct: 653 KFVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDSGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIALLV+ +++Q+VLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIALLVAGSEEQTVLTATENGYGKRTPIAEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQV 849
>gi|339324951|ref|YP_004684644.1| DNA gyrase subunit A [Cupriavidus necator N-1]
gi|338165108|gb|AEI76163.1| DNA gyrase subunit A [Cupriavidus necator N-1]
Length = 888
Score = 1170 bits (3028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/867 (63%), Positives = 696/867 (80%), Gaps = 25/867 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDPFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF SNYDG EKEPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLFDIDKETVDFDSNYDGSEKEPSILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++DG L++L NP+ ++++LI++IPAPDFPTAGIIYG+ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEIVDGCLHLLRNPQATVDELIELIPAPDFPTAGIIYGIQGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EKK+E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKKVEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN LYK TQLQ+TFGMNM+ALV+ QP+LLNL+++L YF+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLYKNTQLQDTFGMNMVALVDRQPRLLNLRQMLEYFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKAWDSALV 420
Query: 421 SKIIG-------FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
++ + +Y + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 RDMLARAEGETPGGRASYRP-DGLPPLFGMQADGLYRLSDGQAQEILQMRLQRLTGLEQD 479
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y +++ + DL DIL+ +RI II DEL I+ ++G RRS+I LNA
Sbjct: 480 KIVQEYRDIMAVIADLLDILARPERITTIIVDELTAIRAEFGDE----RRSQIELNATEL 535
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLI QDMV+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTHD
Sbjct: 536 DTEDLITPQDMVVTLSHSGYMKSQPISEYRAQKRGGRGKQATATKEDDWIDTLFVANTHD 595
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKV+++PQGSRNSRG+PI+NMF L EKI VILP+ + F +
Sbjct: 596 YILCFSNRGRLYWLKVYEVPQGSRNSRGRPIVNMFPLSEGEKINVILPV----KQFDAEH 651
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
++FM+T+ G VKKT L+ FSNPRK+GIIAV+L + D+LIGAA+TDG +D+MLFSD+GKAV
Sbjct: 652 FIFMATARGTVKKTALTEFSNPRKAGIIAVDLDDGDYLIGAAVTDGQHDVMLFSDAGKAV 711
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQ---------KQSVLTATENGYGK 764
RF+EN VR MGR ARGV GM LE Q VIA+LV+ + + SVLTATENGYGK
Sbjct: 712 RFDENDVRPMGRQARGVRGMNLEDGQTVIAMLVAPAETAEEAEAGVRGSVLTATENGYGK 771
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT I EYT+H RGTKG+I+I+T++RNG+VVAA LV+ EIMLITTGG+LIRTRV+EIR+
Sbjct: 772 RTPIAEYTRHGRGTKGMIAIQTSERNGRVVAAALVSPEDEIMLITTGGVLIRTRVAEIRE 831
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCK 851
MGR+TQGV LI V+ +KL G+QR+ +
Sbjct: 832 MGRATQGVTLINVDEGTKLSGLQRIVE 858
>gi|390566629|ref|ZP_10246986.1| DNA gyrase subunit A [Burkholderia terrae BS001]
gi|389941391|gb|EIN03163.1| DNA gyrase subunit A [Burkholderia terrae BS001]
Length = 875
Score = 1170 bits (3028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/859 (63%), Positives = 700/859 (81%), Gaps = 16/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SY++YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYIEYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFQPNYDGSENEPTILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE++D ++L NPE +I++LI+I+PAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLTEIVDACHHLLKNPEATIDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRATTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L +F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVILNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSHFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID+FI II++ TP AK ++++ W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKQELMDRPWDSSIV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLQRAETDNASSGGRSAYRPEGLNPAYGMQVDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+++Y +V+ ++ DL DIL+ +RI II DEL IK+++G RRS I +NA
Sbjct: 481 DKILSEYRDVMAQIADLLDILARPERITSIIFDELVSIKSEFGDE----RRSRIEMNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHSGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIDTLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D+ILCFSN GR+YWLKV+++PQGSRNSRG+PI+NMF L + EKITV+LP+ ++F +
Sbjct: 597 DHILCFSNRGRVYWLKVYEVPQGSRNSRGRPIVNMFPLLDGEKITVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++FM+T+LG VKKT L FS P K GIIAV L + D+LIGAA+TDG +D+MLFSDSGKA
Sbjct: 653 KFIFMATALGTVKKTPLEAFSRPLKKGIIAVGLDDGDYLIGAAITDGEHDVMLFSDSGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIALLV+ ++++SVLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIALLVAGDEQESVLTATENGYGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLIT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEAQIMLITNTGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRLCK 851
LI+++ +KL G+Q++ +
Sbjct: 833 TLISLDEGTKLSGLQQVAE 851
>gi|344174034|emb|CCA85815.1| DNA gyrase, subunit A, type II topoisomerase [Ralstonia syzygii
R24]
Length = 885
Score = 1170 bits (3027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/866 (63%), Positives = 696/866 (80%), Gaps = 23/866 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL D+DKET++F NYDG E EPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADIDKETVNFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NP+ ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLREVVDGCLHLLRNPDATVDELIEMIPAPDFPTAGIIYGISGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRSWDSGLV 420
Query: 421 SKIIGFNKKNY---NTISKINN---ISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + T + + +Q++ +YKLSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 REMLSRAESDTAGGRTAYRPEGLLPVFGMQDDGLYKLSDTQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+ +Y V++++ DL DIL+ +RI II +EL +I+ ++G RRS+I NA
Sbjct: 481 IVQEYREVMEQIADLLDILARPERITAIIVEELTLIRAEFGDE----RRSQIEHNATELD 536
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTHDY
Sbjct: 537 TEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDY 596
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F + ++
Sbjct: 597 ILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQHF 652
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKAVR
Sbjct: 653 VFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVR 712
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYGKR 765
F+EN VR MGR ARGV GM LE+ Q+VIA+LV+ + SVLTATENGYGKR
Sbjct: 713 FDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYGKR 772
Query: 766 TLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKM 825
T I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR+M
Sbjct: 773 TPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREM 832
Query: 826 GRSTQGVILITVENKSKLCGVQRLCK 851
GR+TQGV LI V +KL G+QR+ +
Sbjct: 833 GRATQGVTLIAVGEGNKLSGLQRVVE 858
>gi|350545779|ref|ZP_08915233.1| DNA gyrase subunit A [Candidatus Burkholderia kirkii UZHbot1]
gi|350526460|emb|CCD40419.1| DNA gyrase subunit A [Candidatus Burkholderia kirkii UZHbot1]
Length = 892
Score = 1170 bits (3026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/856 (63%), Positives = 693/856 (80%), Gaps = 14/856 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRR L++MHE+NN WN
Sbjct: 13 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRALYSMHELNNDWN 72
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+Y+ +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 73 RPYKKSARIVGDVIGKYHPHGDASVYETIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 132
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E+EP VLP RIPNLLINGS+GIAVGMAT
Sbjct: 133 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEQEPEVLPARIPNLLINGSAGIAVGMAT 192
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++D L++L+ PE ++++LI+I+PAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 193 NIPPHNLREIVDACLHLLNTPEATVDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRV 252
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DE+PYQVNK++LLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 253 VMRAATHFEEIDRGQRMAIIVDEIPYQVNKRTLLERIAELVNEKKLEGISDIRDESDKSG 312
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN LYKQTQLQ+TFGMN++ALV+GQPKLLNLKE+L F+LHR+E
Sbjct: 313 MRVVIELKRGEVPEVILNNLYKQTQLQDTFGMNLVALVDGQPKLLNLKEMLECFLLHRRE 372
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKAR+ H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 373 VLTRRTVYELRKARDRGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLV 432
Query: 421 SKIIGFNKKNYN------TISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + +N LQ + +YKLSD+QAQEIL+M LQRLT +EQ K
Sbjct: 433 REMLTRAETEASGGRVAYRPEGLNPAYGLQEDGLYKLSDVQAQEILQMRLQRLTGLEQDK 492
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I ++Y +V+ ++ DL DIL+ +RI ++I DEL ++ ++G RRS I +NA +
Sbjct: 493 ITSEYRDVMAQIADLLDILARPERIRQMIVDELGQVRAEFGDD----RRSRIEMNATELN 548
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QDMV+T+S+ GY+KSQP+SEY AQKRGGRGK+A K++DWI+ LFIANTHD+
Sbjct: 549 TEDLITPQDMVVTMSHSGYVKSQPLSEYHAQKRGGRGKQATQMKEDDWIDTLFIANTHDH 608
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+LCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F + Y
Sbjct: 609 MLCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPI----KEFSADKY 664
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TSLG VKKT L FS P K GIIAV L + D+LIGAA+TDG +D+MLFSD+GKAVR
Sbjct: 665 VFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDDGDYLIGAAITDGEHDVMLFSDAGKAVR 724
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VRAMGR ARGV GM+LE Q+VIALLV+ + QSVLTATENGYGKRT I EYT+H
Sbjct: 725 FDENDVRAMGREARGVRGMQLEDGQQVIALLVAGGENQSVLTATENGYGKRTPINEYTRH 784
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T++RNG+VVAATLV EIMLITT G+LIRTRVSEIR+MGR+TQGV L
Sbjct: 785 GRGTKGMIAIQTSERNGRVVAATLVEPESEIMLITTSGVLIRTRVSEIREMGRATQGVTL 844
Query: 835 ITVENKSKLCGVQRLC 850
I+++ +KL G+Q +
Sbjct: 845 ISLDEGTKLSGLQHIA 860
>gi|120611936|ref|YP_971614.1| DNA gyrase subunit A [Acidovorax citrulli AAC00-1]
gi|120590400|gb|ABM33840.1| DNA gyrase subunit A [Acidovorax citrulli AAC00-1]
Length = 886
Score = 1169 bits (3025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/858 (62%), Positives = 695/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L+VL +P+ +++++++IIPAPDFPTAGIIYG++ V +GY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHVLRHPDATVDEIMEIIPAPDFPTAGIIYGINGVKEGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRARCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALV+GQP+L NL++++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPRLCNLRDLIVVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI+IIR + TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIRIIRESPTPPIAKTELMNRAWDSQLV 420
Query: 421 SKIIGFNKKNYNTISK-------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVVNADDYRPEGLEREYGMGQDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++++ + DL DIL+ +R+ II DEL IK ++G HK +RR+ + +A +
Sbjct: 481 KIVAEYKDIMAVIEDLLDILAKPERVSVIIGDELTAIKAEFGQHKLGMRRTLVEHSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L+ EKI V+LPL+ + R FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVVLPLTGDMRTFPADR 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
+VFM+TS+G VKKT L FSNPRK GIIAVNL + D+LIGAALTDG +D+MLFSD GK V
Sbjct: 661 FVFMATSMGTVKKTALDEFSNPRKGGIIAVNLDDGDYLIGAALTDGQHDVMLFSDGGKGV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR +GR+ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPLGRAARGVRGMMLEDGQSVIAMLVAEDETQSVLTATENGYGKRTSIVEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRV+EIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHAEDEIMLITDKGVLVRTRVAEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ +KL G+QR+ +
Sbjct: 841 LIALDEGAKLSGLQRIVE 858
>gi|332529392|ref|ZP_08405353.1| DNA gyrase subunit A [Hylemonella gracilis ATCC 19624]
gi|332041190|gb|EGI77555.1| DNA gyrase subunit A [Hylemonella gracilis ATCC 19624]
Length = 890
Score = 1169 bits (3025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/868 (63%), Positives = 695/868 (80%), Gaps = 17/868 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKE + I LEEEM +SYLDYAMSVI+GRALPD RDG KPVHRRVLFAMHE+NN WN
Sbjct: 1 MTEFAKETLPISLEEEMRRSYLDYAMSVIIGRALPDARDGFKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGS+DGD AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRHMLVDGQGNFGSVDGDPAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E L D+DKET+DF NYDG EKEP VLPTR+PNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEALADIDKETVDFGPNYDGSEKEPLVLPTRVPNLLVNGSGGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L+VL NP SI++L++IIPAPDFPTAGIIYG+ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHVLKNPGASIDELMEIIPAPDFPTAGIIYGMQGVKDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ H E+ ++ R +II+DELPYQVNKKSLLE+I++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRARCHFEDIDKGQRQSIIVDELPYQVNKKSLLERIAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV GQPKL NLK+++ F+ HR+E
Sbjct: 301 MRVVIELKRGELPEVVLNNLYKQTQLQDTFGMNMVALVGGQPKLCNLKDLIVVFLDHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI+IIR + TP AK +++ W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRAWDSKLV 420
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ ++ + I+ + + +QN+ +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRSRADGGVINADDYRPEGLEREFGMQNDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ ++ +L DIL+ +R+ I+ +EL IK ++G K RRS + NA +
Sbjct: 481 KIVAEYKDVMAEIENLLDILARPERVAAIVGEELAGIKQEFGQTKLGARRSVVEHNAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
+TEDLIA +D V+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 ATEDLIAPEDKVVTLSHAGYIKSQPLSEYRAQKRGGRGKQATQTKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P+GSRNSRG+PI+NMF L EKITV+LPL+ FP ++
Sbjct: 601 YILCFSNRGRLYWLKVWEVPEGSRNSRGRPIVNMFPLAEGEKITVVLPLTGEFSSFPSDH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+T +G VKKT L F+NPRK+GIIAV+L DFLIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATRMGTVKKTSLDEFNNPRKAGIIAVDLDAGDFLIGAALTDGRHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ----------SVLTATENGYG 763
RF+EN VR MGR+ARGV GM L+ Q VIA+LV+ ++ Q SVLTATENGYG
Sbjct: 721 RFDENDVRPMGRNARGVRGMMLDDGQSVIAMLVAQDETQNDVNGEAARTSVLTATENGYG 780
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
KRT I EYT+H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR
Sbjct: 781 KRTPIAEYTRHGRGTKGMIAIQQSERNGKVVAATLVHTDDEIMLITDKGVLVRTRVSEIR 840
Query: 824 KMGRSTQGVILITVENKSKLCGVQRLCK 851
+MGR+TQGV LI +++ ++L G+QR+ +
Sbjct: 841 EMGRATQGVTLIALDDGTQLSGLQRIVE 868
>gi|300692121|ref|YP_003753116.1| DNA gyrase subunit A [Ralstonia solanacearum PSI07]
gi|299079181|emb|CBJ51849.1| DNA gyrase, subunit A, type II topoisomerase [Ralstonia
solanacearum PSI07]
Length = 885
Score = 1169 bits (3025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/867 (63%), Positives = 695/867 (80%), Gaps = 25/867 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL D+DKET++F NYDG E EPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADIDKETVNFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NP+ ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLREVVDGCLHLLRNPDATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRSWDSGLV 420
Query: 421 SKII-------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + Y + + +Q++ +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLSRAESDTAGGRAAYRP-EGLLPVFGMQDDGLYKLSDTQAQEILQMRLQRLTGLEQD 479
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y V++++ DL DIL+ +RI II +EL +I+ ++G RRS+I NA
Sbjct: 480 KIVQEYREVMEQIADLLDILARPERITAIIVEELTLIRAEFGDE----RRSQIEHNATEL 535
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTHD
Sbjct: 536 DTEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHD 595
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F + +
Sbjct: 596 YILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQH 651
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
+VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKAV
Sbjct: 652 FVFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAV 711
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYGK 764
RF+EN VR MGR ARGV GM LE+ Q+VIA+LV+ + SVLTATENGYGK
Sbjct: 712 RFDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYGK 771
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR+
Sbjct: 772 RTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIRE 831
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCK 851
MGR+TQGV LI V +KL G+QR+ +
Sbjct: 832 MGRATQGVTLIAVGEGNKLSGLQRVVE 858
>gi|221068230|ref|ZP_03544335.1| DNA gyrase, A subunit [Comamonas testosteroni KF-1]
gi|220713253|gb|EED68621.1| DNA gyrase, A subunit [Comamonas testosteroni KF-1]
Length = 898
Score = 1169 bits (3024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/867 (62%), Positives = 698/867 (80%), Gaps = 16/867 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG E EP VLP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLGDIDKETVDFGPNYDGSESEPLVLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NP+ SI++L++IIPAPDFPTAGIIYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDGCLHLLQNPDASIDELMEIIPAPDFPTAGIIYGINGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R +II+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALVNGQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKLTQLQDTFGMNMVALVNGQPKLCNLKDLIQVFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ H+LEGL +AL NID+FI IIR+ TP AK ++E +W+ V
Sbjct: 361 VVTRRTVFELRKARDRGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAALMEKSWDSKLV 420
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + +Q N +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRTDGGVVNADDYRPEGLEVEFGMQGNGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++++ + DL DIL+ +R+ II +ELN +K ++G KK RRS + +A +
Sbjct: 481 KIVAEYKDIMSVIEDLLDILAKPERVSIIIGEELNAVKAEFGQSKKGERRSTVEYSAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYR+QKRGGRGK A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRSQKRGGRGKLATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
Y+LCFSN GR+YWLKVW++P GSR SRG+PI+NMF L++ EKI V+LPL+ R FP+++
Sbjct: 601 YLLCFSNRGRMYWLKVWEVPSGSRGSRGRPIVNMFPLQDGEKINVVLPLTGENRSFPEDH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L+ FSNPRK+GIIAV L D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATSMGTVKKTALTEFSNPRKAGIIAVGLDEGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQ---------KQSVLTATENGYGK 764
RF+EN VR MGR+ARGV GM +E+ Q VIA+LV+ QSVLTATENGYGK
Sbjct: 721 RFDENDVRPMGRNARGVRGMNIEEHQNVIAMLVAEADDGTGNVVAGSQSVLTATENGYGK 780
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT I EYT+H RGTKG+I+I+ ++RNGKVVAATLV EIMLIT G+L+RTRV+EIR+
Sbjct: 781 RTAISEYTRHGRGTKGMIAIQQSERNGKVVAATLVAPEDEIMLITDTGVLVRTRVAEIRE 840
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCK 851
+GR+TQGV LI ++ +KL G+QR+ +
Sbjct: 841 LGRATQGVTLINLDAGAKLIGLQRIVE 867
>gi|171316171|ref|ZP_02905395.1| DNA gyrase, A subunit [Burkholderia ambifaria MEX-5]
gi|171098680|gb|EDT43475.1| DNA gyrase, A subunit [Burkholderia ambifaria MEX-5]
Length = 867
Score = 1169 bits (3024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/857 (64%), Positives = 691/857 (80%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P+VLP+RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFEPNYDGNEMQPAVLPSRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L+N + +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLNNADATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRATTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTIYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKPWDSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 RDMLTRAETENASAGGRSAYRPEGLNPAFGMQTDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y V+ ++ DL DIL+ +RI +I DEL +K ++G + RRS I LNA
Sbjct: 481 DKIIGEYREVMAQIADLLDILARPERITTMIGDELTSVKAEFG----DARRSRIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 597 DYILCFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSDSGKA
Sbjct: 653 KFVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDSGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q+VIALLV+ +++Q+VLTATENGYGKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQQVIALLVAGSEEQTVLTATENGYGKRTPIAEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQV 849
>gi|344170742|emb|CCA83169.1| DNA gyrase, subunit A, type II topoisomerase [blood disease
bacterium R229]
Length = 885
Score = 1169 bits (3023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/867 (63%), Positives = 694/867 (80%), Gaps = 25/867 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL D+DKET++F NYDG E EPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADIDKETVNFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NP+ ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLREVVDGCLHLLRNPDATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRGWDSGLV 420
Query: 421 SKII-------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + Y + + +Q++ +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLSRAESDTAGGRAAYRP-EGLLPVFGMQDDGLYKLSDTQAQEILQMRLQRLTGLEQD 479
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y V++++ DL DIL+ +RI II +EL +I+ ++G RRS+I NA
Sbjct: 480 KIVQEYREVMEQIADLLDILARPERITAIIVEELTLIRAEFGDE----RRSQIEHNATEL 535
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTHD
Sbjct: 536 DTEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHD 595
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F + +
Sbjct: 596 YILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQH 651
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
+VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKAV
Sbjct: 652 FVFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAV 711
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYGK 764
RF+EN VR MGR ARGV GM LE+ Q+VIA+LV+ + SVLTATENGYGK
Sbjct: 712 RFDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYGK 771
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR+
Sbjct: 772 RTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIRE 831
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCK 851
MGR+TQGV LI V +KL G+QR+ +
Sbjct: 832 MGRATQGVTLIAVGEGNKLSGLQRVVE 858
>gi|332527566|ref|ZP_08403613.1| DNA gyrase subunit A [Rubrivivax benzoatilyticus JA2]
gi|332111969|gb|EGJ11946.1| DNA gyrase subunit A [Rubrivivax benzoatilyticus JA2]
Length = 894
Score = 1168 bits (3022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/868 (62%), Positives = 694/868 (79%), Gaps = 17/868 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MSQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELSNHWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP+VLP R+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLEDIDKETVDFAPNYDGSEKEPTVLPARLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++D L++L PE +I +L++I+PAPDFPTAGIIYGL V +GY TG+GRV
Sbjct: 181 NIPPHNLNEIVDACLHLLKVPEATIEELMEIVPAPDFPTAGIIYGLEGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DE+PYQVNKK+LLE+I++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDEIPYQVNKKTLLERIAELVNEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ++FG+NM+ALV+GQP+L NLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDSFGINMVALVDGQPRLCNLKQLLDIFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI+ I+++ TP AK ++ W+ V
Sbjct: 361 VVTRRTVYELRKARERGHVLEGLAVALANIDEFIETIKTSPTPPVAKAALMSKAWDSSMV 420
Query: 421 SKIIGFNKKNY---NTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ +++ + + LQ + +Y+LS+ QAQEIL+M LQRLT +EQ K
Sbjct: 421 REMLARAEESTAGGRAAYRPEGLPAGYGLQADGLYRLSEDQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
II +Y V+ ++ DL DIL+ +R+ I+ +ELN ++ ++G K RRS I NA+
Sbjct: 481 IIGEYREVMSQIADLLDILARPERVTAILVEELNALRQEFGQAKVGARRSVIERNALELG 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS+ GYIKSQP++EYRAQ+RGGRGK+A TKD+DWI+QLFIANTHD+
Sbjct: 541 TEDLITPTDMVVTLSHTGYIKSQPLTEYRAQRRGGRGKQATQTKDDDWIDQLFIANTHDW 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFS+ GR+YWLKVW++PQGSRNSRGKPI+NMF L+ EKITV+LPL+ R FP ++Y
Sbjct: 601 ILCFSDRGRVYWLKVWEVPQGSRNSRGKPIVNMFPLQPGEKITVVLPLTGEFRSFPADHY 660
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFMST+LG VKKT L FSNPRK+GIIAV L D+LIGAALTDG +D+MLFSD GKAVR
Sbjct: 661 VFMSTALGTVKKTPLDEFSNPRKAGIIAVGLDEGDYLIGAALTDGRHDVMLFSDGGKAVR 720
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVS-----------NNQKQSVLTATENGYG 763
F+E+ VR MGR+ARGV GM LE Q VIA+LVS ++ + SVLTATENG+G
Sbjct: 721 FDEDDVRPMGRNARGVRGMALEPGQNVIAMLVSDRGDEARDVGEDSTRVSVLTATENGFG 780
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
KRT I EYT+H RGTKG+I+I+ ++RNGKVVAATLV EIMLIT G+L+RTRV+EIR
Sbjct: 781 KRTPIGEYTRHGRGTKGMIAIQQSERNGKVVAATLVRETDEIMLITDRGVLVRTRVAEIR 840
Query: 824 KMGRSTQGVILITVENKSKLCGVQRLCK 851
+MGR+TQGV LI +++ +KL G+QR+ +
Sbjct: 841 EMGRATQGVTLIALDDGAKLSGLQRIVE 868
>gi|73542263|ref|YP_296783.1| DNA gyrase subunit A [Ralstonia eutropha JMP134]
gi|72119676|gb|AAZ61939.1| DNA gyrase subunit A [Ralstonia eutropha JMP134]
Length = 883
Score = 1168 bits (3021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/867 (63%), Positives = 698/867 (80%), Gaps = 25/867 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDPFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG EKEP++LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLHDIDKETVDFDPNYDGSEKEPAILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++DG L++L NP+ ++++LI++IPAPDFPTAGIIYG+ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEIVDGCLHLLRNPQATVDELIELIPAPDFPTAGIIYGIQGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH E+ +R R AII+DELPYQVNK++LLE+I++LV EKK+E IS++RDESDKSG
Sbjct: 241 VMRARTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKKVEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN LYK TQLQ+TFGMNM+ALV+ QP+LLNLK++L YF+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLYKNTQLQDTFGMNMVALVDRQPRLLNLKQMLEYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSGLV 420
Query: 421 SKIIGF-------NKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + +Y + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLARAEADTPGGRASYRP-DGLPAMFGMQGDGLYRLSDSQAQEILQMRLQRLTGLEQD 479
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y +V+ + DL DIL+ +RI II+DEL I+ ++G RRS+I LNA
Sbjct: 480 KIVQEYRDVMAIIADLLDILARPERITTIISDELTAIRAEFGDE----RRSQIELNATEL 535
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLI QDMV+TLS+ GY+KSQPISEYRAQKRGGRGK A TK++DWI+ LF+ANTHD
Sbjct: 536 DTEDLITPQDMVVTLSHSGYMKSQPISEYRAQKRGGRGKLATATKEDDWIDTLFVANTHD 595
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKV+++PQGSRNSRG+PI+NMF L + EKI VILP+ R F +
Sbjct: 596 YILCFSNRGRLYWLKVYEVPQGSRNSRGRPIVNMFPLSDGEKINVILPV----RQFDAEH 651
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
++FM+T+ G VKKT L+ FSNPRK+GIIAV+L D+LIGAA+TDG +D+MLFSD+GKAV
Sbjct: 652 FIFMATARGTVKKTALTEFSNPRKAGIIAVDLDEGDYLIGAAVTDGQHDVMLFSDAGKAV 711
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYGK 764
RF+EN VR MGR ARGV GM L++ Q VIA+LV+ + SVLTATENGYGK
Sbjct: 712 RFDENDVRPMGRQARGVRGMNLDESQTVIAMLVAPAETAEQTEAGSPGSVLTATENGYGK 771
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT I EYT+H RGTKG+I+I+T++RNG+VVAA LV+ EIMLITTGG+LIRTRV+EIR+
Sbjct: 772 RTPIAEYTRHGRGTKGMIAIQTSERNGRVVAAALVSPDDEIMLITTGGVLIRTRVAEIRE 831
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCK 851
MGR+TQGV LI V+ +KL G+QR+ +
Sbjct: 832 MGRATQGVTLINVDEGTKLSGLQRIVE 858
>gi|386334118|ref|YP_006030289.1| DNA gyrase subunit A [Ralstonia solanacearum Po82]
gi|334196569|gb|AEG69754.1| DNA gyrase subunit A [Ralstonia solanacearum Po82]
Length = 1016
Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/868 (63%), Positives = 696/868 (80%), Gaps = 27/868 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 132 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 191
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 192 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 251
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL D+DKET+DF NYDG E EPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 252 RYTEIRLSKIAHELLADIDKETVDFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 311
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NPE ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 312 NIPPHNLREVVDGCLHLLRNPEVTVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 371
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 372 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG 431
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 432 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 491
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 492 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRSWDSGLV 551
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ +T+ + + +Q + +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 552 RDML--SRAESDTVGGRTAYRPEGLLPVFGMQGDGLYKLSDTQAQEILQMRLQRLTGLEQ 609
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+ +Y V+ ++ DL DIL+ +RI II +EL +I++++G RRS+I NA
Sbjct: 610 DKIVQEYREVMAQIADLLDILARPERITAIIVEELTLIRSEFGDE----RRSQIEHNATE 665
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTH
Sbjct: 666 LDTEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTH 725
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F +
Sbjct: 726 DYILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEL 781
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKA
Sbjct: 782 HFVFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKA 841
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYG 763
VRF+EN VR MGR ARGV GM LE+ Q+VIA+LV+ + SVLTATENGYG
Sbjct: 842 VRFDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYG 901
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
KRT I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR
Sbjct: 902 KRTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIR 961
Query: 824 KMGRSTQGVILITVENKSKLCGVQRLCK 851
+MGR+TQGV LI V +KL G+QR+ +
Sbjct: 962 EMGRATQGVTLIAVGEGNKLSGLQRVVE 989
>gi|393757472|ref|ZP_10346296.1| DNA gyrase subunit A [Alcaligenes faecalis subsp. faecalis NCIB
8687]
gi|393165164|gb|EJC65213.1| DNA gyrase subunit A [Alcaligenes faecalis subsp. faecalis NCIB
8687]
Length = 897
Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/860 (62%), Positives = 693/860 (80%), Gaps = 15/860 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VR+AQ FS+R TLVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRLAQDFSMRYTLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL D+D+ET+DF+ NYDG EKEP++LP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADIDQETVDFVPNYDGSEKEPALLPSRLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV++G LY L +PEC++++LI+ IPAPDFPT IIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLAEVVNGCLYCLSHPECTVDELIEYIPAPDFPTGAIIYGMSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RA TH E+ + NR AI++D +PYQVNKKSL E+I++LV EK++E IS++RDESDK G
Sbjct: 241 IMRASTHFEDMEKGNRQAIVVDAIPYQVNKKSLQERIAELVNEKRIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ TFGMNM+ALV+GQP+LLNLK+++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKNTQLQETFGMNMVALVDGQPRLLNLKQLVDYFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWN---- 416
V+ RRT+F+LRKARE H+LEGL +AL NID FI II++ TP A+ +++ +W+
Sbjct: 361 VVTRRTVFQLRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPVARVELMARSWDSGLV 420
Query: 417 -----LPDVSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNME 471
D S I+G ++ Y + + + ++ +Y+LSD+QAQEIL M LQRLT +E
Sbjct: 421 REMLARADTSAIVG-GRQAYRP-DDLGDEFGMSSDGLYRLSDVQAQEILNMRLQRLTGLE 478
Query: 472 QKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI 531
Q KI+ +Y V+ K+ DL DILSN R+ II DEL +++++ + K++RRS+I NA
Sbjct: 479 QDKIVQEYREVMDKISDLLDILSNPTRVSAIIGDELIAVRDEFSATGKDVRRSQIEHNAT 538
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
TEDLI DMV+TLS+ GYIKSQP+SEYRAQ+RGGRGK+A K++DWI++LFIANT
Sbjct: 539 ELDTEDLITPMDMVVTLSHTGYIKSQPLSEYRAQRRGGRGKQATAMKEDDWIDKLFIANT 598
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HDY+LCFSN GR+YWLKVW++PQGSRNSRG+PI+NMF L+ EKI V+L + ++F +
Sbjct: 599 HDYLLCFSNRGRVYWLKVWEVPQGSRNSRGRPIVNMFPLEEGEKINVVLSV----KEFSE 654
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
+ +VFM+TS G VKKT LS+FSNPRK+GIIAV L D+LIGA LTDG +D+MLFSD+GK
Sbjct: 655 DQFVFMATSRGTVKKTPLSDFSNPRKAGIIAVGLDEGDYLIGAQLTDGVHDVMLFSDAGK 714
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
AVRF+E VR MGR+ARGV GM LE+ Q VIALLV+ ++ QSVLTAT+NG+GKRT I EY
Sbjct: 715 AVRFDEGDVRPMGRAARGVRGMTLEEGQSVIALLVAEDETQSVLTATQNGFGKRTPIGEY 774
Query: 772 TKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQG 831
T+H RGTKG+I+I+T+ RNGKVV A LV EIMLIT G+L+RTRV+EIR+MGR+TQG
Sbjct: 775 TRHGRGTKGMIAIQTSARNGKVVGAVLVRETDEIMLITNAGVLVRTRVAEIREMGRATQG 834
Query: 832 VILITVENKSKLCGVQRLCK 851
V LI+V++ S+L GV R+ +
Sbjct: 835 VTLISVDDDSELSGVYRVVE 854
>gi|187927867|ref|YP_001898354.1| DNA gyrase subunit A [Ralstonia pickettii 12J]
gi|187724757|gb|ACD25922.1| DNA gyrase, A subunit [Ralstonia pickettii 12J]
Length = 889
Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/866 (63%), Positives = 693/866 (80%), Gaps = 23/866 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRR L++MHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRALYSMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL DLDKET++F NYDG E EPSVLP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADLDKETVNFEPNYDGSETEPSVLPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NPE ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDGCLHLLRNPEATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRIEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPVAKAELMNRSWDSGLV 420
Query: 421 SKIIGFNKKNYN------TISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
++ + + + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 RDMLVRAESETSGGGAAYRPEGLLPVFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+ +Y V+ ++ DL DIL+ +RI II +EL I+ ++G RRS+I NA
Sbjct: 481 IVQEYREVMAQIADLLDILARPERITAIIVEELTAIRAEFGDE----RRSQIEHNATELD 536
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTHDY
Sbjct: 537 TEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDY 596
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F + ++
Sbjct: 597 ILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQHF 652
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKAVR
Sbjct: 653 VFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVR 712
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYGKR 765
F+EN VR MGR ARGV GM LE+ Q+VIA+LV+ + + SVLTATENGYGKR
Sbjct: 713 FDENDVRPMGRQARGVRGMNLEETQQVIAMLVAPAETEGEGAQSVAGSVLTATENGYGKR 772
Query: 766 TLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKM 825
T I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR+M
Sbjct: 773 TPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREM 832
Query: 826 GRSTQGVILITVENKSKLCGVQRLCK 851
GR+TQGV LI+V +KL G+QR+ +
Sbjct: 833 GRATQGVTLISVGEGNKLSGLQRVME 858
>gi|312795448|ref|YP_004028370.1| DNA gyrase subunit A [Burkholderia rhizoxinica HKI 454]
gi|312167223|emb|CBW74226.1| DNA gyrase subunit A (EC 5.99.1.3) [Burkholderia rhizoxinica HKI
454]
Length = 867
Score = 1167 bits (3018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/857 (64%), Positives = 689/857 (80%), Gaps = 14/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYETIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI +ELL D+DKET+DF NYDG E +P VLP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIGHELLADIDKETVDFEPNYDGSETQPQVLPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L++P+ SI++LI+I+PAPDFPTAGI+YG+ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLNHPQASIDELIEIVPAPDFPTAGIVYGVQGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH EE +R R AII+DELPYQVNK+SLLE+I++LV EKK+E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKIEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+AL++GQPKLLNL+E+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALIDGQPKLLNLRELLECFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELR+ARE H+LEGL +AL NID FI II++ TP AK ++ W+ V
Sbjct: 361 VVTRRTLYELRRARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQALMTRAWDSALV 420
Query: 421 SKIIGFNK------KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
++ + ++ + I +Q++ +YKLSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 RDMLSRAQGETPGGRDAFRPDGLAPIFGMQSDGLYKLSDTQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I +Y V+ ++ DL DIL+ +RI II DEL IK ++G + RRS+I LNA
Sbjct: 481 ITAEYREVMAQIADLLDILAKPERIRTIIADELVAIKAEFG----DPRRSQIELNATELG 536
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QDMV+T+S+ GYIKSQP+SEYRAQKRGGRGK+A++ KD+DWI LFIANTHDY
Sbjct: 537 TEDLITPQDMVVTMSHAGYIKSQPLSEYRAQKRGGRGKQAIVMKDDDWIETLFIANTHDY 596
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GR+YWLKV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F + +
Sbjct: 597 ILCFSNRGRVYWLKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSADKF 652
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VF++TSLG VKKT L FS P + GIIAV L + DFLIGA +TDG +D+MLFSD+GKAVR
Sbjct: 653 VFLATSLGTVKKTPLEAFSRPLRKGIIAVGLDDGDFLIGAQITDGQHDVMLFSDAGKAVR 712
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VR MGR ARGV GM+LE+ Q+VIALLV+ + QSVLTATENGYGKRT I EYT+H
Sbjct: 713 FDENDVRPMGREARGVRGMQLEEGQQVIALLVAGGESQSVLTATENGYGKRTPIAEYTRH 772
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T++RNG+VVAATLV EIMLITT G+LIRTRVSEIR+MGR+TQGV L
Sbjct: 773 GRGTKGMIAIQTSERNGRVVAATLVEPDSEIMLITTAGVLIRTRVSEIREMGRATQGVTL 832
Query: 835 ITVENKSKLCGVQRLCK 851
I+++ +KL G+Q++ +
Sbjct: 833 ISLDEGTKLSGLQQIAE 849
>gi|309781037|ref|ZP_07675775.1| DNA gyrase, A subunit [Ralstonia sp. 5_7_47FAA]
gi|404394050|ref|ZP_10985854.1| DNA gyrase, A subunit [Ralstonia sp. 5_2_56FAA]
gi|308920103|gb|EFP65762.1| DNA gyrase, A subunit [Ralstonia sp. 5_7_47FAA]
gi|348614264|gb|EGY63816.1| DNA gyrase, A subunit [Ralstonia sp. 5_2_56FAA]
Length = 889
Score = 1167 bits (3018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/866 (63%), Positives = 692/866 (79%), Gaps = 23/866 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRR L++MHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRALYSMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL DLDKET++F NYDG E EPSVLP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADLDKETVNFEPNYDGSETEPSVLPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NPE ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDGCLHLLRNPEATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRIEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPVAKAELMNRSWDSGLV 420
Query: 421 SKIIGFNKKNYN------TISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
++ + + + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 RDMLVRAESETSGGGAAYRPEGLLPVFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+ +Y V+ ++ DL DIL+ +RI II +EL I+ ++G RRS+I NA
Sbjct: 481 IVQEYREVMAQIADLLDILARPERITAIIVEELTAIRAEFGDE----RRSQIEHNATELD 536
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTHDY
Sbjct: 537 TEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDY 596
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F + ++
Sbjct: 597 ILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQHF 652
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKAVR
Sbjct: 653 VFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVR 712
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYGKR 765
F+EN VR MGR ARGV GM LE+ Q+VIA+LV+ + SVLTATENGYGKR
Sbjct: 713 FDENDVRPMGRQARGVRGMNLEENQQVIAMLVAPAETAGEGAQSVAGSVLTATENGYGKR 772
Query: 766 TLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKM 825
T I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR+M
Sbjct: 773 TPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREM 832
Query: 826 GRSTQGVILITVENKSKLCGVQRLCK 851
GR+TQGV LI+V +KL G+QR+ +
Sbjct: 833 GRATQGVTLISVGEGNKLSGLQRVME 858
>gi|241662455|ref|YP_002980815.1| DNA gyrase subunit A [Ralstonia pickettii 12D]
gi|240864482|gb|ACS62143.1| DNA gyrase, A subunit [Ralstonia pickettii 12D]
Length = 889
Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/866 (63%), Positives = 692/866 (79%), Gaps = 23/866 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRR L++MHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRALYSMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL DLDKET++F NYDG E EPSVLP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADLDKETVNFEPNYDGSETEPSVLPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NPE ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDGCLHLLRNPEATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRIEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPVAKAELMNRSWDSGLV 420
Query: 421 SKIIGFNKKNYN------TISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
++ + + + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 RDMLVRAESETSGGGAAYRPEGLLPVFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+ +Y V+ ++ DL DIL+ +RI II +EL I+ ++G RRS+I NA
Sbjct: 481 IVQEYREVMAQIADLLDILAKPERITAIIVEELTAIRAEFGDE----RRSQIEHNATELD 536
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTHDY
Sbjct: 537 TEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDY 596
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F + ++
Sbjct: 597 ILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQHF 652
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKAVR
Sbjct: 653 VFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVR 712
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYGKR 765
F+EN VR MGR ARGV GM LE+ Q+VIA+LV+ + SVLTATENGYGKR
Sbjct: 713 FDENDVRPMGRQARGVRGMNLEENQQVIAMLVAPAETAGEGAQSGAGSVLTATENGYGKR 772
Query: 766 TLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKM 825
T I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR+M
Sbjct: 773 TPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREM 832
Query: 826 GRSTQGVILITVENKSKLCGVQRLCK 851
GR+TQGV LI+V +KL G+QR+ +
Sbjct: 833 GRATQGVTLISVGEGNKLSGLQRVME 858
>gi|124267425|ref|YP_001021429.1| DNA gyrase subunit A [Methylibium petroleiphilum PM1]
gi|124260200|gb|ABM95194.1| DNA gyrase subunit A [Methylibium petroleiphilum PM1]
Length = 873
Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/857 (63%), Positives = 691/857 (80%), Gaps = 6/857 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L DLDK T+DF NYDG EKEP V+PTR+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLADLDKGTVDFGPNYDGSEKEPLVMPTRLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E +D L++L NPE SI++L++IIPAPDFPTAGIIYGL+ V +GY TG+G+V
Sbjct: 181 NIPPHNLNETVDACLHLLKNPEASIDELMEIIPAPDFPTAGIIYGLNGVREGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R +II+DE+PYQVNKK+LLE++++LV EKKLE IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGARQSIIVDEIPYQVNKKTLLERMAELVHEKKLEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ++FG+NM+ALV+GQPKL NL++++ F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDSFGINMVALVDGQPKLCNLRDLVEVFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI+II+++ TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIEIIKNSPTPPLAKQGLMDKSWDSSLV 420
Query: 421 SKII------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ ++ + + +Q + +Y+LSD QAQEIL+M LQRLT +EQ K
Sbjct: 421 REMLVRAASDTPGGRDAFRPEGLPAVYGMQADGLYRLSDDQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
II +Y+ V+ + DL DILS +R+ II +EL +K ++G K RRS I N
Sbjct: 481 IIGEYKEVMAHIADLLDILSKPERVTTIIGEELVAVKQEFGQTKLGARRSVIEHNVQELG 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS+ GY+KSQP++EYRAQ+RGGRGK+A TKD+DWI QLFIANTHD+
Sbjct: 541 TEDLITPTDMVVTLSHTGYVKSQPLAEYRAQRRGGRGKQATQTKDDDWIEQLFIANTHDW 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+LCFSN GR+YWLKVW++PQG R +RGKPI+NMF L+ EKITV+LPL+ R FP ++Y
Sbjct: 601 MLCFSNRGRVYWLKVWEVPQGGRAARGKPIVNMFPLQPNEKITVVLPLTGEFRTFPSDHY 660
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
+FMST+LG VKKT L FSNPRK+GIIAV+L D LIGAALTDG +D+MLFSD GKAVR
Sbjct: 661 IFMSTALGTVKKTALDEFSNPRKAGIIAVDLDEGDHLIGAALTDGKHDVMLFSDGGKAVR 720
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+E+ VR MGR+ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+H
Sbjct: 721 FDEDDVRPMGRNARGVRGMALEPGQNVIAMLVAEDESQSVLTATENGYGKRTSITEYTRH 780
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+ +RNG+VVAATLV EIMLIT G+L+RTRVSEIR++GR+TQGV L
Sbjct: 781 GRGTKGMIAIQQTERNGRVVAATLVRPEDEIMLITDRGVLVRTRVSEIRELGRATQGVTL 840
Query: 835 ITVENKSKLCGVQRLCK 851
I++++ S+L G+QR+ +
Sbjct: 841 ISLDDGSQLGGLQRIVE 857
>gi|121610061|ref|YP_997868.1| DNA gyrase subunit A [Verminephrobacter eiseniae EF01-2]
gi|121554701|gb|ABM58850.1| DNA gyrase subunit A [Verminephrobacter eiseniae EF01-2]
Length = 914
Score = 1165 bits (3013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/858 (63%), Positives = 690/858 (80%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLF+MHE++N WN
Sbjct: 30 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFSMHELHNDWN 89
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR VG+ MGKYHPHGD +IYD +VRMAQSFSLR L+DGQGNFGS+DGD+AAAM
Sbjct: 90 RPYRKSARAVGDVMGKYHPHGDTAIYDTIVRMAQSFSLRHMLIDGQGNFGSVDGDNAAAM 149
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS+GIAVGMAT
Sbjct: 150 RYTEIRLAKIAHEMLADIDKETVDFGPNYDGNEKEPLVLPSKLPNLLVNGSAGIAVGMAT 209
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++LH+P+ SI++L++IIPAPDFPTAGIIYG++ V DGY TG+G+V
Sbjct: 210 NIPPHNLNEVVDACLHLLHHPDASIDELMEIIPAPDFPTAGIIYGINGVKDGYRTGRGKV 269
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKKL+ IS+++DESDKSG
Sbjct: 270 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKLDGISHIQDESDKSG 329
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+AL++GQP+L NLK+++ F+ HR+E
Sbjct: 330 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALIDGQPRLCNLKDLVSVFLQHRRE 389
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID+FI IIR+ TP AK ++ +W+ V
Sbjct: 390 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAGLMAQSWDSQLV 449
Query: 421 SKIIGFNKKNYNTISK-------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ ++ + + Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 450 REMLTRTRADGAQVNADDYRPEGLDQELGMGRDGRYRLSDTQAQEILQMRLQRLTGLEQD 509
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++ + V DL DIL+ +R+ II EL I+ ++G HK + RRS I +A +
Sbjct: 510 KIVAEYKDAMDVVDDLLDILAKPERVSIIIGQELAAIRQEFGQHKLSARRSIIEHSAQDL 569
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLI DMV+TLS+ GYIKSQP+ EYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 570 CTEDLITPTDMVVTLSHTGYIKSQPLGEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD 629
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L++ EKI V+LPL+ R FP +
Sbjct: 630 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQDGEKINVVLPLTGAMRSFPADR 689
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L FSNPRK GIIA +L + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 690 YVFMATSMGTVKKTALDEFSNPRKGGIIAGHLDDGDYLIGAALTDGQHDVMLFSDGGKAV 749
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR + R ARGV GM LE+ Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 750 RFDENDVRPLSRQARGVRGMLLEEGQSVIAMLVAEDETQSVLTATENGYGKRTGIVEYTR 809
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ + RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 810 HGRGTKGMIAIQQSGRNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT 869
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ +KL G+QR+ +
Sbjct: 870 LIALDEGAKLSGLQRIVE 887
>gi|161525434|ref|YP_001580446.1| DNA gyrase subunit A [Burkholderia multivorans ATCC 17616]
gi|189349829|ref|YP_001945457.1| DNA gyrase subunit A [Burkholderia multivorans ATCC 17616]
gi|160342863|gb|ABX15949.1| DNA gyrase, A subunit [Burkholderia multivorans ATCC 17616]
gi|189333851|dbj|BAG42921.1| DNA gyrase subunit A [Burkholderia multivorans ATCC 17616]
Length = 867
Score = 1165 bits (3013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/859 (63%), Positives = 693/859 (80%), Gaps = 16/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYETIVRMAQDFSLRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L+NP+ +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLNNPDATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKAWDSSLV 420
Query: 421 SKIIGFNKKNYNTISK--------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + +N +Q + +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAEAENAAAGGRAAYRPEGLNPAFGMQGDGLYKLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I +EL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQISDLLDILARPERITTMIGEELTTVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DY+LCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 597 DYMLCFSNRGRVYWIKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSD+GKA
Sbjct: 653 KFVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L++ Q+VIALLV+ ++ QSVLTATENG+GKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLDEGQQVIALLVAGSEDQSVLTATENGFGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRLCK 851
LI+++ +KL G+Q++ +
Sbjct: 833 TLISLDEGTKLSGLQQIAE 851
>gi|375105131|ref|ZP_09751392.1| DNA gyrase, A subunit [Burkholderiales bacterium JOSHI_001]
gi|374665862|gb|EHR70647.1| DNA gyrase, A subunit [Burkholderiales bacterium JOSHI_001]
Length = 879
Score = 1164 bits (3012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/858 (62%), Positives = 693/858 (80%), Gaps = 8/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DK+T+DF NYDG E+EP VLP+R+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLADIDKDTVDFGPNYDGSEREPLVLPSRLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NP I +L++IIPAPDFPTAGIIYG++ V +GY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHLLKNPGAGIEELMEIIPAPDFPTAGIIYGINGVREGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R +II+DE+PYQVNKK+LLE+I++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGARQSIIVDEIPYQVNKKTLLERIAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+AL++GQPKL NL ++L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALIDGQPKLCNLLDLLAIFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL NID FI+ I+++ TP AK ++ +W+ V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDEFIETIKTSPTPPVAKAALMAKSWDSSMV 420
Query: 421 SKIIG-------FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ ++ Y + LQ + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLARAEQETPGGREAYRP-EGLPGHYGLQPDGLYRLSDDQAQEILQMRLQRLTGLEQD 479
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KII +Y+ V+ + DL DIL+ +R+ II++EL +K ++G K RRS + N
Sbjct: 480 KIIGEYKEVMAVIADLLDILAKPERVTFIISEELTALKQEFGQTKLGARRSVVERNVQEL 539
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
TEDLIA DMV+TLS+ GYIKSQP++EYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 540 GTEDLIAPTDMVVTLSHTGYIKSQPLAEYRAQKRGGRGKQATQTKEDDWIDQLFIANTHD 599
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
+ILCFSN GR+YWLKVW++PQGSRNSRGKPI+NMF L+ +EKITV+LPL+ R FP ++
Sbjct: 600 WILCFSNRGRVYWLKVWEVPQGSRNSRGKPIVNMFPLQPEEKITVVLPLTGEFRTFPADH 659
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
Y+FMST+LG VKKT L FSNPRK+GIIAV+L + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 660 YIFMSTALGTVKKTALDEFSNPRKAGIIAVDLDDGDYLIGAALTDGKHDVMLFSDGGKAV 719
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+E+ VR MGR ARGV GM LE+ Q++IA+LV+ ++ QSVLTATENGYGKRT I EYT+
Sbjct: 720 RFDEDDVRPMGRQARGVRGMMLEEGQRLIAMLVAEDETQSVLTATENGYGKRTSIGEYTR 779
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNG+VVAATLV EIMLIT G+++RTRVSEIR++GR+TQGV
Sbjct: 780 HGRGTKGMIAIQQSERNGRVVAATLVRPEDEIMLITDKGVVVRTRVSEIRELGRATQGVT 839
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ ++L VQR+ +
Sbjct: 840 LIALDAGAQLIAVQRIVE 857
>gi|221201254|ref|ZP_03574294.1| DNA gyrase, A subunit [Burkholderia multivorans CGD2M]
gi|221206292|ref|ZP_03579305.1| DNA gyrase, A subunit [Burkholderia multivorans CGD2]
gi|221173601|gb|EEE06035.1| DNA gyrase, A subunit [Burkholderia multivorans CGD2]
gi|221179104|gb|EEE11511.1| DNA gyrase, A subunit [Burkholderia multivorans CGD2M]
Length = 867
Score = 1164 bits (3012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/859 (63%), Positives = 693/859 (80%), Gaps = 16/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYETIVRMAQDFSLRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
N+PPHNL EV+D ++L+NP+ +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NVPPHNLNEVVDACQHLLNNPDATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKAWDSSLV 420
Query: 421 SKIIGFNKKNYNTISK--------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + +N +Q + +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAEAENAAAGGRAAYRPEGLNPAFGMQGDGLYKLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I +EL +K ++G + RRS+I LNA
Sbjct: 481 DKIIGEYRDVMAQISDLLDILARPERITTMIGEELTTVKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 537 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DY+LCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 597 DYMLCFSNRGRVYWIKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSD+GKA
Sbjct: 653 KFVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L++ Q+VIALLV+ ++ QSVLTATENG+GKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLDEGQQVIALLVAGSEDQSVLTATENGFGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRLCK 851
LI+++ +KL G+Q++ +
Sbjct: 833 TLISLDEGTKLSGLQQIAE 851
>gi|332284745|ref|YP_004416656.1| DNA gyrase subunit A [Pusillimonas sp. T7-7]
gi|330428698|gb|AEC20032.1| DNA gyrase subunit A [Pusillimonas sp. T7-7]
Length = 864
Score = 1164 bits (3011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/843 (64%), Positives = 686/843 (81%), Gaps = 13/843 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAMRYTE RL KI++ELL
Sbjct: 61 YHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDSAAAMRYTEIRLAKIAHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMATNIPPHNL EVI+G LY
Sbjct: 121 DIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMATNIPPHNLAEVIEGCLY 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
L NP+CSI +LI++IPAPDFPT GIIYG+S V +GY TG+GRVI+RAKTH E+ + NR
Sbjct: 181 CLRNPDCSIEELIELIPAPDFPTGGIIYGMSGVREGYRTGRGRVIMRAKTHFEDMEKGNR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+D LPYQVNKK+L EKI+ LV +K++E IS++RDESDK GMR+VIELKR E+PE++
Sbjct: 241 QAIIVDALPYQVNKKTLQEKIADLVNDKRIEGISDIRDESDKDGMRLVIELKRGEVPEVI 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQP+LLNLK+I+ YF+ HR+EV+ RRT+F+LRKARE
Sbjct: 301 LNNLYKNTQLQDTFGMNMVALVDGQPRLLNLKQIVEYFLFHRREVVTRRTVFQLRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII--------GFNK 428
H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V +++ +
Sbjct: 361 GHVLEGLAVALANIDDFITIIKAAPTPPVARQELMARSWDSSLVREMLVRADDGVTPGGR 420
Query: 429 KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
Y + + LQ++ +Y+LS++QAQEIL M LQRLT +EQ KI+ +Y++++ + D
Sbjct: 421 AAYRP-EGLPQVFGLQDDGLYRLSEVQAQEILNMRLQRLTGLEQDKIVGEYKDIMTTIAD 479
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI II+DEL IK ++ + K+ RRSEI NA TEDLI DMV+TL
Sbjct: 480 LLDILARPERITAIISDELLAIKAEFSTSAKDTRRSEIEHNATELDTEDLITPMDMVVTL 539
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S GYIKSQP+SEYRAQKRGGRGK+A K+ DW++QLFIANTHDY+LCFS+ GR+YWLK
Sbjct: 540 SQTGYIKSQPLSEYRAQKRGGRGKQATAMKENDWVDQLFIANTHDYLLCFSDRGRVYWLK 599
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
VW++PQGSRNSRG+PI+NMF L + EKITV+LP+ ++F +++YVFM+TS G VKKT
Sbjct: 600 VWEVPQGSRNSRGRPIVNMFPLVDDEKITVVLPV----KEFSEDHYVFMATSRGTVKKTP 655
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
LS+FSNPRK+GIIAV L + DFLIGA LTDG++D+MLFSDSGKAVRF+EN VR MGR+AR
Sbjct: 656 LSDFSNPRKAGIIAVALDDNDFLIGADLTDGAHDVMLFSDSGKAVRFDENDVRPMGRTAR 715
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM LE+ Q VIA+LV+ ++ QSVLTATENG+GKRT I EYT+H RGTKG+I+I+T+
Sbjct: 716 GVRGMMLEEGQVVIAMLVAGDETQSVLTATENGFGKRTSIVEYTRHGRGTKGMIAIQTSA 775
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVV A LV EIMLITTGG+L+RTRVSEIR+MGR+TQGV LI+V++ S L GV+R
Sbjct: 776 RNGKVVGAVLVRPSDEIMLITTGGVLVRTRVSEIREMGRATQGVTLISVDDNSMLSGVRR 835
Query: 849 LCK 851
+ +
Sbjct: 836 VVE 838
>gi|83749097|ref|ZP_00946102.1| DNA gyrase subunit A [Ralstonia solanacearum UW551]
gi|83724218|gb|EAP71391.1| DNA gyrase subunit A [Ralstonia solanacearum UW551]
Length = 1016
Score = 1164 bits (3011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/868 (63%), Positives = 696/868 (80%), Gaps = 27/868 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 132 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 191
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 192 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 251
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL D+DKET++F NYDG E EPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 252 RYTEIRLSKIAHELLADIDKETVNFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 311
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++L NP+ ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 312 NIPPHNLREVVDGCLHLLRNPDATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 371
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R +II+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 372 VMRAKTHFEDIDRGQRQSIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG 431
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 432 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 491
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ +W+ V
Sbjct: 492 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRSWDSGLV 551
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
++ ++ +T+ + + +Q + +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 552 RDML--SRAESDTVGGRTAYRPEGLLPVFGMQGDGLYKLSDTQAQEILQMRLQRLTGLEQ 609
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+ +Y V+ ++ DL DIL+ +RI II +EL +I++++G RRS+I NA
Sbjct: 610 DKIVQEYREVMAQIADLLDILARPERITAIIVEELTLIRSEFGDE----RRSQIEHNATE 665
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTH
Sbjct: 666 LDTEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTH 725
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F +
Sbjct: 726 DYILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQ 781
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKA
Sbjct: 782 HFVFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKA 841
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYG 763
VRF+EN VR MGR ARGV GM LE+ Q+VIA+LV+ + SVLTATENGYG
Sbjct: 842 VRFDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYG 901
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
KRT I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR
Sbjct: 902 KRTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIR 961
Query: 824 KMGRSTQGVILITVENKSKLCGVQRLCK 851
+MGR+TQGV LI V +KL G+QR+ +
Sbjct: 962 EMGRATQGVTLIAVGEGNKLSGLQRVVE 989
>gi|319792463|ref|YP_004154103.1| DNA gyrase subunit A [Variovorax paradoxus EPS]
gi|315594926|gb|ADU35992.1| DNA gyrase, A subunit [Variovorax paradoxus EPS]
Length = 881
Score = 1164 bits (3011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/858 (63%), Positives = 693/858 (80%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE + I LEEEM SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTSFAKETLPISLEEEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YD +VR+AQ FS+R LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLADIDKETVDFQDNYDGSEKEPKVLPSQLPNLLVNGSGGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NP+ +I++L++I+PAPDFPTAGIIYG++ V DGY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHLLRNPQATIDELMEIVPAPDFPTAGIIYGINGVKDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALVNGQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVNGQPKLCNLKDLIEVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F LRKARE H+LEGL +AL NID FI+IIR + TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRSWDSKLV 420
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ ++ + I+ + + + ++ +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRSRADGGVINADDYRPEGLEREFGMGSDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ ++ DL DIL+ +R+ II DEL IK ++G K RRS + +A +
Sbjct: 481 KIVAEYKDVMAEIDDLLDILAKPERVSVIIGDELGTIKQEFGQSKLGARRSLVEHSAFDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+ EYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHSGYIKSQPLGEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L+ EKI V L L+ KR+FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVALALTGEKRNFPADQ 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFMSTS+G VKKT L F+NPRK GIIAVNL + D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMSTSMGTVKKTALDEFNNPRKGGIIAVNLDDGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF E+ VR +GR+ARGV GM L+ Q VIA+LV+ +++QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFAEDDVRPLGRNARGVRGMSLDPGQGVIAMLVAEDEQQSVLTATENGYGKRTSITEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRV+EIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVAEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ +KL G+QR+ +
Sbjct: 841 LIGLDEGAKLSGLQRIVE 858
>gi|347817582|ref|ZP_08871016.1| DNA gyrase subunit A [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 881
Score = 1164 bits (3010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/859 (63%), Positives = 683/859 (79%), Gaps = 9/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+ WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELRVDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARLVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DK+T+DF NYDG EKEP VLP+R+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLADIDKDTVDFGPNYDGSEKEPLVLPSRLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVID L++L NP+ SI++L++IIPAPDFPTAGIIYG+ V DGY TG+G+V
Sbjct: 181 NIPPHNLNEVIDACLHLLRNPDASIDELMEIIPAPDFPTAGIIYGIQGVKDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKKLE IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKLEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+ALV+GQP+L NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLCNLKDLIDVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT FELRKAR+ H+LEGL +AL NID FI IIR+ TP AK ++ W+ V
Sbjct: 361 VVTRRTAFELRKARDRGHVLEGLAVALANIDEFIAIIRNAPTPPVAKTALMARPWDSGLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ N +Y ++ + + +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGAAINADDYRP-EDLDQGLGMGRDGLYRLSDTQAQEILQMRLQRLTGLEQ 479
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+ +Y+ ++ + DL DIL+ +R+ I+ DEL I+ ++G HK RRS + +A +
Sbjct: 480 DKIVAEYKEIMAVIEDLLDILAKPERVSLIMGDELAAIRQEFGQHKLGARRSVVEHSAQD 539
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK +DWI+QLFIANTH
Sbjct: 540 ISTEDLITPTDMVVTLSHAGYIKSQPLSEYRAQKRGGRGKQATATKADDWIDQLFIANTH 599
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D+ILCFSN GRLYW+KVW++P G R +RG+PI+NMF L++ EKI V+LPL+ R FP +
Sbjct: 600 DFILCFSNRGRLYWIKVWEVPAGLRGARGRPIVNMFPLQDGEKINVVLPLTGEMRSFPAD 659
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+TS+G VKKT L FSNPRK GIIAVNL D+LIGAALTDG +D+MLFSD GKA
Sbjct: 660 RYVFMATSMGTVKKTALDEFSNPRKGGIIAVNLDEGDYLIGAALTDGRHDVMLFSDGGKA 719
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR +GR ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT I EYT
Sbjct: 720 VRFDENDVRPLGRQARGVRGMMLEDGQSVIAMLVAEDETQSVLTATENGYGKRTSIVEYT 779
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRV+EIR +GR+TQGV
Sbjct: 780 RHGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVAEIRALGRATQGV 839
Query: 833 ILITVENKSKLCGVQRLCK 851
LI ++ SKL G+QR+ +
Sbjct: 840 TLIALDEGSKLGGLQRIVE 858
>gi|398807958|ref|ZP_10566828.1| DNA gyrase, A subunit [Variovorax sp. CF313]
gi|398088589|gb|EJL79147.1| DNA gyrase, A subunit [Variovorax sp. CF313]
Length = 881
Score = 1164 bits (3010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/858 (62%), Positives = 692/858 (80%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE + I LEEEM SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTSFAKETLPISLEEEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YD +VR+AQ FS+R LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLADIDKETVDFQDNYDGSEKEPKVLPSQLPNLLVNGSGGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NPE SI++L++I+PAPDFPTAGIIYG++ V DGY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHLLRNPEASIDELMEIVPAPDFPTAGIIYGINGVKDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALV+GQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLIQVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F LRKARE H+LEGL +AL NID FI+IIR + TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRSWDSKLV 420
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + I+ + + + + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVINADDYRPEGLEREFGMGGDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ ++ DL DIL+ +R+ II +EL IK ++G K RRS + +A +
Sbjct: 481 KIVAEYKDVMAEIDDLLDILAKPERVSTIIGEELGTIKQEFGQSKTGARRSLVEHSAYDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+ EYRAQKRGGRGK+A TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHSGYIKSQPLGEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L+ EKI V L L+ +KR+FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVALALTGDKRNFPADQ 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L F+NPRK GIIAVNL D+LIGAALTDG +D+MLFSD+GKAV
Sbjct: 661 YVFMATSMGTVKKTALDEFNNPRKGGIIAVNLDEGDYLIGAALTDGKHDVMLFSDNGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+E VR +GR+ARGV GM LE Q VIA+LV+ +++QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDEEDVRPLGRNARGVRGMSLEPGQGVIAMLVAEDEQQSVLTATENGYGKRTSITEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRV+EIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVAEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ +KL G+QR+ +
Sbjct: 841 LIGLDEGAKLSGLQRIVE 858
>gi|221213573|ref|ZP_03586547.1| DNA gyrase, A subunit [Burkholderia multivorans CGD1]
gi|221166362|gb|EED98834.1| DNA gyrase, A subunit [Burkholderia multivorans CGD1]
Length = 889
Score = 1163 bits (3009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/859 (63%), Positives = 693/859 (80%), Gaps = 16/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 23 MDQFAKETLPTSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 82
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 83 RAYKKSARIVGDVIGKYHPHGDSAVYETIVRMAQDFSLRYMLVDGQGNFGSIDGDNAAAM 142
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP RIPNLLINGSSGIAVGMAT
Sbjct: 143 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPARIPNLLINGSSGIAVGMAT 202
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L+NP+ +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 203 NIPPHNLNEVVDACQHLLNNPDATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 262
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 263 VMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 322
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+E
Sbjct: 323 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRRE 382
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 383 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKAWDSSLV 442
Query: 421 SKIIGFNKKNYNTISK--------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + +N +Q + +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 443 REMLTRAEAENAAAGGRAAYRPEGLNPAFGMQGDGLYKLSDTQAQEILQMRLQRLTGLEQ 502
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +V+ ++ DL DIL+ +RI +I +EL +K ++G + RRS+I LNA
Sbjct: 503 DKIIGEYRDVMAQISDLLDILARPERITTMIGEELTTVKAEFG----DARRSKIELNATE 558
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTH
Sbjct: 559 LNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTH 618
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DY+LCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 619 DYMLCFSNRGRVYWIKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSAD 674
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM+TSLG VKKT L FS P K GIIAV L D+LIGA++TDG++D+MLFSD+GKA
Sbjct: 675 KFVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDAGKA 734
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+L++ Q+VIALLV+ ++ QSVLTATENG+GKRT I EYT
Sbjct: 735 VRFDENDVRPMGREARGVRGMQLDEGQQVIALLVAGSEDQSVLTATENGFGKRTPITEYT 794
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 795 RHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGV 854
Query: 833 ILITVENKSKLCGVQRLCK 851
LI+++ +KL G+Q++ +
Sbjct: 855 TLISLDEGTKLSGLQQIAE 873
>gi|121605684|ref|YP_983013.1| DNA gyrase subunit A [Polaromonas naphthalenivorans CJ2]
gi|120594653|gb|ABM38092.1| DNA gyrase subunit A [Polaromonas naphthalenivorans CJ2]
Length = 889
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/858 (63%), Positives = 691/858 (80%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSLRHLLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL DLDKET+DF NYDG E+EP V+PTR+PNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADLDKETVDFGPNYDGSEQEPLVMPTRLPNLLVNGSGGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NPE SI++L++IIPAPDFPT GIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHLLKNPEASIDELMEIIPAPDFPTGGIIYGINGVKDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R +II+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VI+LKR E+PE+VLN LYKQTQLQ+TFG+NM+AL+NGQPKL NLK+++ FI HR+E
Sbjct: 301 MRLVIDLKRGEVPEVVLNNLYKQTQLQDTFGINMVALINGQPKLCNLKDLIQVFISHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F LRKARE H+LEGL +AL NID FI IIR+ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIAIIRNAPTPPVAKAELMTRAWDSSLV 420
Query: 421 SKIIGFNKKNYNTIS----KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + ++ + + + K + ++ +Y+LS+ Q QEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAHADGGVVNADDYRPDGLEKSFGMGSDGLYRLSETQTQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ ++ DL DIL+ +R+ II EL IK ++G K RRS I ++ +
Sbjct: 481 KIVAEYKEVMAEIDDLLDILARPERVSTIIGQELAAIKLEFGQTKLGARRSHIEHSSFDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DW++QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWVDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFS+ GRLYWLKVW++P GSR SRG+PI+NMF L+ EKITV+L L+ KR FP +
Sbjct: 601 YILCFSDRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKITVVLALTGEKRSFPADQ 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L +F+NPRK GIIAV L D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATSMGTVKKTPLDDFNNPRKGGIIAVALDEGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM LE+ Q VIA+LV+ + +QSVLTAT+ G+GKRT I EYT+
Sbjct: 721 RFDENDVRPMGRNARGVRGMNLEEGQGVIAMLVAEDGEQSVLTATQMGFGKRTSISEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR+MGR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDRGVLVRTRVSEIREMGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ S+L G+QR+ +
Sbjct: 841 LIGLDEGSQLSGLQRIVE 858
>gi|383757247|ref|YP_005436232.1| DNA gyrase subunit A GyrA [Rubrivivax gelatinosus IL144]
gi|381377916|dbj|BAL94733.1| DNA gyrase subunit A GyrA [Rubrivivax gelatinosus IL144]
Length = 886
Score = 1162 bits (3005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/861 (62%), Positives = 690/861 (80%), Gaps = 10/861 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MSQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELSNHWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP+VLP R+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLEDIDKETVDFAPNYDGSEKEPTVLPARLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++D L++L PE +I +L++I+PAPDFPTAGIIYGL V +GY TG+GRV
Sbjct: 181 NIPPHNLNEIVDACLHLLKVPESTIEELMEIVPAPDFPTAGIIYGLEGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R +II+DE+PYQVNKK+LLE+I++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQSIIVDEIPYQVNKKTLLERIAELVNEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ++FG+NM+ALV+GQP+L NLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDSFGINMVALVDGQPRLCNLKQLLEIFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++EL+KARE H+LEGL +AL NID FI+ I+++ TP AK ++ W+ V
Sbjct: 361 VVTRRTVYELKKARERGHVLEGLAVALANIDEFIETIKTSPTPPMAKAALMSKAWDSSMV 420
Query: 421 SKIIGFNKKNY---NTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ +++ + + LQ + +Y+LS+ QAQEIL+M LQRLT +EQ K
Sbjct: 421 REMLARAEESTAGGRAAYRPEGLPAGYGLQADGLYRLSEDQAQEILQMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
II +Y V+ ++ DL DILS +R+ I+ DELN ++ ++G K RRS I NA
Sbjct: 481 IIGEYREVMTQIADLLDILSRPERVTAILVDELNALRQEFGQTKVGARRSVIERNAQELG 540
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS+ GYIKSQP++EYRAQ+RGGRGK+A TK++DWI+QLFIANTHD+
Sbjct: 541 TEDLITPTDMVVTLSHTGYIKSQPLTEYRAQRRGGRGKQATQTKEDDWIDQLFIANTHDW 600
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
ILCFS+ GR+YWLKVW++PQGSRNSRGKPI+NMF L+ EKITV+LPL+ R FP ++Y
Sbjct: 601 ILCFSDRGRVYWLKVWEVPQGSRNSRGKPIVNMFPLQPGEKITVVLPLTGEFRSFPADHY 660
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM T+ G VKKT L +FSNPRK+GIIAV L + D+LIGAALTDG +D+MLFSD GKAVR
Sbjct: 661 VFMVTAFGTVKKTPLDDFSNPRKAGIIAVGLDDGDYLIGAALTDGHHDVMLFSDGGKAVR 720
Query: 715 FNEN----SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKE 770
FNE+ VR MGR A GV GM LE Q+VIALLV+ ++ QSVLTATENGYGKRT I E
Sbjct: 721 FNEDPEEGGVRPMGRQAGGVKGMELEPGQRVIALLVAEDETQSVLTATENGYGKRTPIAE 780
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
YT+H RG KG+IS+ ++RNGKVVAATL EIMLIT G+L+RTRV+EIR+MGR+TQ
Sbjct: 781 YTRHRRGGKGMISMLQSERNGKVVAATLARDTDEIMLITDRGVLVRTRVAEIREMGRATQ 840
Query: 831 GVILITVENKSKLCGVQRLCK 851
GV LI++++ ++L G+QR+ +
Sbjct: 841 GVTLISLDDGTRLSGLQRIVE 861
>gi|388567483|ref|ZP_10153916.1| DNA gyrase subunit A [Hydrogenophaga sp. PBC]
gi|388265296|gb|EIK90853.1| DNA gyrase subunit A [Hydrogenophaga sp. PBC]
Length = 878
Score = 1162 bits (3005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/858 (62%), Positives = 695/858 (81%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTSFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+D+ NYDG EKEP VLPTR+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLADIDKETVDYGPNYDGSEKEPLVLPTRLPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NPE SI++L++IIPAPDFPTAGIIYG+ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHMLKNPEASIDELMEIIPAPDFPTAGIIYGVQGVKDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ ++ R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDKGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALV+GQP+L NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPRLCNLKDLITVFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIF LRKARE H+LEGL +AL NID FI+IIR + TP AK++++ +W+ V
Sbjct: 361 VVTRRTIFNLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKSELMSRSWDSQLV 420
Query: 421 SKIIGFNKKNYNTISK-------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ K + T++ ++ +Q + +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRAKADGGTVNADDYRPDGLDRHYGMQGDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ ++ DL DIL+ +R+ II++EL ++ ++G K RRSEI NA +
Sbjct: 481 KIVAEYKEVMAEIDDLLDILARPERVSTIISEELIAVRQEFGQTKLGARRSEIEHNAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
+TEDLI DMV+TLS+ GYIKSQP++EYR+QKRGGRGK+A TK++DW++QLFIANTHD
Sbjct: 541 ATEDLITPTDMVVTLSHSGYIKSQPLNEYRSQKRGGRGKQATATKEDDWVDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
+ILCFSN GRLYWLKVW++P GSR SRGKPI+NMF L EKI V+L L+ R FP ++
Sbjct: 601 WILCFSNRGRLYWLKVWEVPSGSRGSRGKPIVNMFPLAEGEKINVVLALTGEFRSFPADH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+T+ G VKKT L FSNPRK+GIIAV+L D+LIGAALTD +D+MLFSD GKAV
Sbjct: 661 YVFMATAGGTVKKTALDEFSNPRKAGIIAVDLDEGDYLIGAALTDSHHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM LE Q VIA+LV+ ++ QSVLTAT NGYGKRT I EYT+
Sbjct: 721 RFDENDVRPMGRNARGVRGMMLEDGQSVIAMLVAEDETQSVLTATVNGYGKRTPIGEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ +IMLIT G+L+RTRV+EIR+MGR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHTDDQIMLITDKGVLVRTRVAEIREMGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI++++ +L G+QR+ +
Sbjct: 841 LISLDDGDELSGLQRIVE 858
>gi|149928283|ref|ZP_01916526.1| DNA gyrase subunit A [Limnobacter sp. MED105]
gi|149823012|gb|EDM82254.1| DNA gyrase subunit A [Limnobacter sp. MED105]
Length = 870
Score = 1160 bits (3001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/857 (63%), Positives = 693/857 (80%), Gaps = 13/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDSFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI+ E+L+D+DKET+DF NYDG E+EP VLP R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAQEMLLDIDKETVDFGPNYDGSEREPKVLPARLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
N+PPHNL EV+ LY + PEC+++DLI++IPAPDFPTAGIIYG+ V +GY TG+GRV
Sbjct: 181 NMPPHNLKEVVAACLYAIDAPECTVDDLIELIPAPDFPTAGIIYGIQGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ ++ R +II+DELPYQVNKK+LLE+I++LV EKK+E IS++RDESDK G
Sbjct: 241 VMRAKTHFEDMDKGGRQSIIVDELPYQVNKKTLLERIAELVSEKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIELKR E+PE++LN LYK TQLQ+TFG+NM+ALV+GQP+LLNL+++++YF+ HR+E
Sbjct: 301 IRVVIELKRGEVPEVILNNLYKNTQLQDTFGINMVALVDGQPRLLNLRDLIFYFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT+FELRKAR+ H+LEGL +AL NID FI II++ TP AK ++ +W+ V
Sbjct: 361 VITRRTVFELRKARDRGHVLEGLAVALANIDEFIAIIKAAPTPPVAKADLVAKSWDSSIV 420
Query: 421 SKIIGFNKKNYNTISKINNIS------KLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+++ + + +K LQ++ MY+LS++QAQEIL M LQRLT +EQ K
Sbjct: 421 REMLSRTELGDSGGAKAFRPEGLPARLGLQDDGMYRLSEVQAQEILNMRLQRLTGLEQDK 480
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
I+N+Y+ VI ++ DL DILS +RI +II DEL I N++ RRS I NA
Sbjct: 481 ILNEYKEVIDQIADLLDILSKPERINQIIKDELTSIGNEFADE----RRSMIEFNATELG 536
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI QDMV+TLS+ GYIKSQP++EYRAQKRGGRGK+A TK++DWI+ LF+ANTHD
Sbjct: 537 TEDLITPQDMVVTLSHSGYIKSQPLTEYRAQKRGGRGKQAATTKEDDWIDYLFVANTHDT 596
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
IL FSN GR+YWLKV+++PQGSR SRG+PIINMF L EKIT +LP+ + + ++ Y
Sbjct: 597 ILYFSNAGRVYWLKVYEVPQGSRTSRGRPIINMFPLAEGEKITAVLPVKSFE---DEDKY 653
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+TSLG VKK+ LS+FS P K GIIAVNL DFLIGAA+T+G+ D+MLFSDSGKAVR
Sbjct: 654 VFMATSLGTVKKSKLSDFSRPMKRGIIAVNLDEGDFLIGAAMTNGTNDVMLFSDSGKAVR 713
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+EN VRAMGR+ARGV GM LE+ Q+VIA+LV+ +++QSVLTATENG+GKRT + EYT+H
Sbjct: 714 FDENDVRAMGRNARGVRGMNLEEGQRVIAMLVAESEQQSVLTATENGFGKRTPVSEYTRH 773
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
RGTKG+I+I+T++RNGKVV+A LVN EIMLITTGG+L+RTRVSEIR+MGR+TQGV L
Sbjct: 774 GRGTKGMIAIQTSERNGKVVSAVLVNPTDEIMLITTGGVLVRTRVSEIREMGRATQGVTL 833
Query: 835 ITVENKSKLCGVQRLCK 851
I+V+ + L G+QR+ +
Sbjct: 834 ISVDEGTWLSGLQRIVE 850
>gi|299066868|emb|CBJ38063.1| DNA gyrase, subunit A, type II topoisomerase [Ralstonia
solanacearum CMR15]
Length = 885
Score = 1159 bits (2998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/868 (63%), Positives = 695/868 (80%), Gaps = 27/868 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + + LEEEM SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ELL D+DKET+DF NYDG E EPS+LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADIDKETVDFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L++LHNP+ ++++LI++IPAPDFPTAGIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLREVVDGCLHLLHNPDATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV EK++E IS++RDESDKSG
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRIEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+LLNL+++L F+LHR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRNWDSGLV 420
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ ++ +T+ + + +Q +YKLSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REML--SRAESDTVGGRAAYRPEGLLPVFGMQEGGLYKLSDTQAQEILQMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KI+ +Y V+ ++ DL DIL+ +RI II +EL +I+ ++G RRS+I NA
Sbjct: 479 DKIVQEYREVMAQIADLLDILARPERITAIIVEELTLIRAEFGDE----RRSQIEHNATE 534
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A TK++DWI+ LF+ANTH
Sbjct: 535 LDTEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTH 594
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DYILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EKI VILP+ + F +
Sbjct: 595 DYILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPV----KQFDEQ 650
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++VFMSTS G VKKT L+ FSNPRK+GIIAV+L DFLIGA +TDG +D+MLFSD+GKA
Sbjct: 651 HFVFMSTSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKA 710
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ---------SVLTATENGYG 763
VRF+EN VR MGR ARGV GM LE+ Q+VIA+LV+ + SVLTATENGYG
Sbjct: 711 VRFDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYG 770
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
KRT I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR
Sbjct: 771 KRTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAAEDEIMLITTGGVLIRTRVDEIR 830
Query: 824 KMGRSTQGVILITVENKSKLCGVQRLCK 851
+MGR+TQGV LI V +KL G+QR+ +
Sbjct: 831 EMGRATQGVTLIAVGEGNKLSGLQRVVE 858
>gi|413958592|ref|ZP_11397831.1| DNA gyrase subunit A [Burkholderia sp. SJ98]
gi|413941172|gb|EKS73132.1| DNA gyrase subunit A [Burkholderia sp. SJ98]
Length = 879
Score = 1159 bits (2997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/856 (63%), Positives = 689/856 (80%), Gaps = 16/856 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRR L++MHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRALYSMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+Y+ +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDASVYETIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E EP VLP RIPNLLINGS+GIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFGPNYDGSENEPLVLPARIPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++D L++L+ PE ++++LI+I+PAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLREIVDACLHLLNTPEATVDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DE+PYQVNK++LLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRAATHFEEIDRGQRMAIIVDEIPYQVNKRTLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN LYKQTQLQ+TFGMN++ALV+GQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVILNNLYKQTQLQDTFGMNLVALVDGQPKLLNLKEMLECFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKAR+ H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTVYELRKARDRGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLV 420
Query: 421 SKII-------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + Y +N LQ + +YKLSD+QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTETEASGGRAAYRP-EGLNPAYGLQEDGLYKLSDVQAQEILQMRLQRLTGLEQD 479
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y V+ ++ DL DIL+ +RI +II +EL I+ ++G RRS I +NA
Sbjct: 480 KIVGEYREVMAQIADLLDILARPERIRQIIVEELGQIRAEFGDD----RRSRIEMNATEL 535
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
+TEDLI DMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTHD
Sbjct: 536 NTEDLITPTDMVVTMSHSGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIDTLFIANTHD 595
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
++LCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F +
Sbjct: 596 HMLCFSNRGRVYWIKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSVDK 651
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+T+LG VKKT L FS P K GIIAV L D+LIGAA+TDG +D+MLFSD+GKAV
Sbjct: 652 YVFMTTALGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGAAITDGQHDVMLFSDAGKAV 711
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VRAMGR ARGV GM+LE Q+VIA+LV+ + QSVLTATENGYGKRT I EYT+
Sbjct: 712 RFDENDVRAMGREARGVRGMQLEDGQQVIAMLVAGGENQSVLTATENGYGKRTPINEYTR 771
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+T++RNG+VVAATLV EIMLITT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 772 HGRGTKGMIAIQTSERNGRVVAATLVEPESEIMLITTAGVLIRTRVSEIREMGRATQGVT 831
Query: 834 LITVENKSKLCGVQRL 849
LI+++ +KL G+Q +
Sbjct: 832 LISLDEGTKLSGLQHI 847
>gi|186475503|ref|YP_001856973.1| DNA gyrase subunit A [Burkholderia phymatum STM815]
gi|184191962|gb|ACC69927.1| DNA gyrase, A subunit [Burkholderia phymatum STM815]
Length = 859
Score = 1159 bits (2997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/843 (64%), Positives = 687/843 (81%), Gaps = 16/843 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SY++YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYIEYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E EPS+LP RIPNLLINGSSGIAVGMATNIPPHNL+E++D +
Sbjct: 121 DIDKETVDFQPNYDGSENEPSILPARIPNLLINGSSGIAVGMATNIPPHNLSEIVDACHH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L NPE SI++LI+I+PAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLKNPEASIDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE++
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVI 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L +F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSHFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNT--- 433
H+LEGL +AL NID+FI II++ TP AK ++++ +W+ V +++ + + T
Sbjct: 361 GHVLEGLAVALANIDDFIAIIKAAPTPPIAKQELMDRSWDSSIVREMLQRAETDNATSGG 420
Query: 434 -----ISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
+N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 RAAYRPEGLNPAYGMQADGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI II DEL IK+++G RRS+I +NA +TEDLI QDMV+T+
Sbjct: 481 LLDILARPERITSIIFDELTTIKSEFGDE----RRSKIEMNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTHD+ILCFSN GR+YWLK
Sbjct: 537 SHSGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIDTLFIANTHDHILCFSNRGRVYWLK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L+ EKITV+LP+ ++F + +VFM+T+LG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQEGEKITVVLPV----KEFSADKFVFMATALGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L + D+LIGAA+TDG +D+MLFSDSGKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPLKKGIIAVGLDDGDYLIGAAITDGEHDVMLFSDSGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q VIALLV+ +++QSVLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQSVIALLVAGDEQQSVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV+ +IMLIT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDPEAQIMLITNTGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 LCK 851
+ +
Sbjct: 833 IAE 835
>gi|260220859|emb|CBA28847.1| DNA gyrase subunit A [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 894
Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/839 (64%), Positives = 681/839 (81%), Gaps = 7/839 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL DLDKET+DF NYDG E EP V+PTRIPNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELLADLDKETVDFGPNYDGSESEPLVMPTRIPNLLVNGSGGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NPE SI++L+ IIPAPDFPTAGIIYG+ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLHLLKNPEASIDELMDIIPAPDFPTAGIIYGIQGVKDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ H E+ ++ R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRARCHFEDIDKGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALVNGQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVNGQPKLCNLKDLIEVFLNHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F LRKARE H+LEGL +AL NID+FI+IIR + TP AK +++ W+ V
Sbjct: 361 VVTRRTVFNLRKARERGHVLEGLAVALANIDDFIRIIRESPTPPVAKTELMNRPWDSKLV 420
Query: 421 SKIIGFNKKNYNTIS----KINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ + + ++ + + K + N+ +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRTRADGGVVNADDYRPEGLEKEFGMGNDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ ++ DL DIL+ R+ II +EL +K ++G K RRS + ++ +
Sbjct: 481 KIVAEYKDVMAEIEDLLDILAKPARVAVIIGEELGHVKQEFGQTKIGARRSLVEHSSFDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+T+S+ GYIKSQP+ EYRAQKRGGRGK+A TK++DW++QLF+ANTHD
Sbjct: 541 STEDLITPTDMVVTMSHSGYIKSQPLHEYRAQKRGGRGKQATATKEDDWVDQLFVANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++PQGSR SRG+PI+NMF L+ EKITV+L L+ KR FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPQGSRGSRGRPIVNMFPLQEGEKITVVLALTGEKRTFPADQ 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFMSTS+G VKKT L FSNPRK+GIIAV+L DFLIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMSTSMGTVKKTALDEFSNPRKAGIIAVDLDEGDFLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM L++ Q VIA+LV+ +++QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDENDVRPMGRNARGVRGMMLDEGQSVIAMLVAEDEQQSVLTATENGYGKRTNITEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR+MGR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHAEDEIMLITDKGVLVRTRVSEIREMGRATQGV 839
>gi|387901691|ref|YP_006332030.1| DNA gyrase subunit A [Burkholderia sp. KJ006]
gi|387576583|gb|AFJ85299.1| DNA gyrase subunit A [Burkholderia sp. KJ006]
Length = 851
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/841 (64%), Positives = 683/841 (81%), Gaps = 16/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E +PSVLP+RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFEPNYDGNETQPSVLPSRIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L+NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLNNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+EV+ RRTI+ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRREVLTRRTIYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTISK 436
H+LEGL +AL NID FI+II++ TP AK ++E +W+ V +++ +
Sbjct: 361 GHVLEGLAVALANIDEFIEIIKAAPTPPIAKQGLMERSWDSSLVREMLARAETENAAAGG 420
Query: 437 --------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
+N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y V+ ++ D
Sbjct: 421 RAAYRPEGLNPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYREVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI +I +EL +K ++G + RRS+I LNA +TEDLI QDMV+T+
Sbjct: 481 LLDILARPERITTMIGEELTSVKAEFG----DARRSKIELNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTHDYILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTHDYILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F + +VFM+TSLG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSADKFVFMATSLGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L + DFLIGA++TDG++D+MLFSD+GKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPMKKGIIAVGLDDGDFLIGASITDGAHDVMLFSDAGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q+VIA+LV+ +++Q+VLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQQVIAMLVAGSEEQTVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 L 849
+
Sbjct: 833 I 833
>gi|167586524|ref|ZP_02378912.1| DNA gyrase subunit A [Burkholderia ubonensis Bu]
Length = 851
Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/843 (64%), Positives = 684/843 (81%), Gaps = 16/843 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDSAVYETIVRMAQDFSLRYMLVDGQGNFGSIDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+LHNPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLHNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLAHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTIS- 435
H+LEGL +AL NID FI II++ TP AK +++ W+ V +++ + T
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKAWDSSLVREMLTRAETENATAGG 420
Query: 436 -------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
+N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 RDAYRPEGLNPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DILS +RI +I +EL +K ++G + RRS+I LNA +TEDLI QDMV+T+
Sbjct: 481 LLDILSRPERITVMIGEELTAVKAEFG----DARRSKIELNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTHDY+LCFSN GR+YW+K
Sbjct: 537 SHSGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTHDYMLCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F + +VFM+TSLG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSADKFVFMATSLGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L + D+LIGA++TDG++D+MLFSD+GKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPMKKGIIAVGLDDGDYLIGASITDGAHDVMLFSDAGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 LCK 851
+ +
Sbjct: 833 IAE 835
>gi|337279002|ref|YP_004618473.1| DNA gyrase subunit A [Ramlibacter tataouinensis TTB310]
gi|334730078|gb|AEG92454.1| Candidate DNA gyrase subunit A [Ramlibacter tataouinensis TTB310]
Length = 878
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/858 (62%), Positives = 691/858 (80%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YD +VR+AQ FS+R LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSGGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NP+ S+ +L++I+PAPDFPTAGIIYG++ V +GY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHLLKNPQASLEELMEIVPAPDFPTAGIIYGINGVKEGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKKLE IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVNEKKLEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALV+GQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLVDIFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LR+ARE H+LEGL +AL NID FI+IIR TP AK +++ W+ V
Sbjct: 361 VVTRRTVYNLRRARERGHVLEGLAVALANIDEFIRIIRQAPTPPVAKAELMNRPWDSSLV 420
Query: 421 SKIIGFNKKNYNTISK-------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ +++ + ++ ++ L + +Y+LSD QA EIL+M LQRLT +EQ
Sbjct: 421 RQMLTRAREDGSVVNADDYRPEGLDRQYGLGGDGLYRLSDTQASEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y++V+ ++ DL DIL+ R+ II +EL +K ++G K RRS + NA +
Sbjct: 481 KIVAEYKDVMAEIEDLLDILARPARVATIIGEELTALKQEFGQTKIGARRSVVEHNAQDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
+TEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A TK++DW++QLFIANTHD
Sbjct: 541 ATEDLITPTDMVVTLSHSGYIKSQPLSEYRAQKRGGRGKQATATKEDDWVDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
+ILCFSN GR+YWLKVW++P GSR SRG+PI+NMF L EKI V+LPL+ R FP ++
Sbjct: 601 WILCFSNRGRMYWLKVWEVPAGSRGSRGRPIVNMFPLAEGEKINVVLPLTGEFRSFPADH 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L+ FSNPRK+GIIAV+L D+LIGA+LTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATSMGTVKKTALNEFSNPRKAGIIAVDLDPGDYLIGASLTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+EN VR MGR+ARGV GM LE Q VIA+LV+ ++ QSVLTAT NG+GKRT I EYT+
Sbjct: 721 RFDENDVRPMGRAARGVRGMTLEDGQSVIAMLVAEDESQSVLTATVNGFGKRTPITEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRVSEIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ SKL G+QR+ +
Sbjct: 841 LIGLDEGSKLSGLQRIVE 858
>gi|254295615|ref|ZP_04963073.1| DNA gyrase, A subunit [Burkholderia pseudomallei 406e]
gi|403519619|ref|YP_006653753.1| DNA gyrase subunit A [Burkholderia pseudomallei BPC006]
gi|157805518|gb|EDO82688.1| DNA gyrase, A subunit [Burkholderia pseudomallei 406e]
gi|403075262|gb|AFR16842.1| DNA gyrase subunit A [Burkholderia pseudomallei BPC006]
Length = 850
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/841 (64%), Positives = 684/841 (81%), Gaps = 16/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNRP+ K AR+VG+ +GK
Sbjct: 1 MRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRPYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMATNIPPHNL EV+D LY
Sbjct: 121 DIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMATNIPPHNLNEVVDACLY 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII--------GFNK 428
H+LEGL +AL NID FI II++ TP AK +++ +W+ V ++
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSSLVRDMLTRAETENAAAGG 420
Query: 429 KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
++ ++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 RDAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI +I DEL +K ++G + RRS+I LNA +TEDLI QDMV+T+
Sbjct: 481 LLDILARPERITTLIGDELTQVKAEFG----DARRSKIELNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTHDYILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTHDYILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F + YVFM+T+LG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSADKYVFMTTALGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLDDAQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 L 849
+
Sbjct: 833 I 833
>gi|239814627|ref|YP_002943537.1| DNA gyrase subunit A [Variovorax paradoxus S110]
gi|239801204|gb|ACS18271.1| DNA gyrase, A subunit [Variovorax paradoxus S110]
Length = 881
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/858 (62%), Positives = 692/858 (80%), Gaps = 7/858 (0%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE + I LEEEM SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MTSFAKETLPISLEEEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VR+AQ FS+R LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L D+DKET+DF NYDG EKEP VLP+++PNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRLAKIAHEMLADIDKETVDFQDNYDGSEKEPKVLPSKLPNLLVNGSGGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NP+ +I++L++I+PAPDFPTAGIIYG++ V DGY TG+G+V
Sbjct: 181 NIPPHNLNEVVDACLHLLRNPQATIDELMEIVPAPDFPTAGIIYGINGVRDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK H E+ +R R AII+DELPYQVNKK+L E++++LV EKK+E IS+++DESDKSG
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALV+GQPKL NLK+++ F+ HR+E
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLIEVFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F LRKARE H+LEGL +AL NID FI+IIR + TP AK +++ +W+ V
Sbjct: 361 VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRSWDSKLV 420
Query: 421 SKIIGFNKKNYNTISKINNISK-------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQK 473
+++ ++ + ++ + + + ++ +Y+LS+ QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLTRSRADGGVVNADDYRPEGLEREFGMGSDGLYRLSETQAQEILQMRLQRLTGLEQD 480
Query: 474 KIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP 533
KI+ +Y+ V+ ++ DL DIL+ +R+ II +EL IK ++G K RRS + +A +
Sbjct: 481 KIVAEYKEVMAEIDDLLDILAKPERVSVIIGEELGTIKQEFGQSKLGARRSLVEHSAYDL 540
Query: 534 STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHD 593
STEDLI DMV+TLS+ GYIKSQP++EYRAQKRGGRGK+A +TK++DWI+QLFIANTHD
Sbjct: 541 STEDLITPTDMVVTLSHSGYIKSQPLNEYRAQKRGGRGKQATVTKEDDWIDQLFIANTHD 600
Query: 594 YILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN 653
YILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L+ EKI V L L+ KR+FP +
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVALALTGEKRNFPADQ 660
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAV 713
YVFM+TS+G VKKT L FSNPRK GIIAVNL D+LIGAALTDG +D+MLFSD GKAV
Sbjct: 661 YVFMATSMGTVKKTTLDEFSNPRKGGIIAVNLDEGDYLIGAALTDGKHDVMLFSDGGKAV 720
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
RF+E VR +GR+ARGV GM L+ Q VIA+LV+ +++QSVLTATENGYGKRT I EYT+
Sbjct: 721 RFDEEDVRPLGRNARGVRGMSLDPGQGVIAMLVAEDEQQSVLTATENGYGKRTSITEYTR 780
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+RTRV+EIR++GR+TQGV
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVAEIRELGRATQGVT 840
Query: 834 LITVENKSKLCGVQRLCK 851
LI ++ +KL G+QR+ +
Sbjct: 841 LIGLDEGAKLSGLQRIVE 858
>gi|167841639|ref|ZP_02468323.1| DNA gyrase subunit A [Burkholderia thailandensis MSMB43]
gi|424903341|ref|ZP_18326854.1| DNA gyrase subunit A [Burkholderia thailandensis MSMB43]
gi|390931214|gb|EIP88615.1| DNA gyrase subunit A [Burkholderia thailandensis MSMB43]
Length = 850
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/841 (64%), Positives = 684/841 (81%), Gaps = 16/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNRP+ K AR+VG+ +GK
Sbjct: 1 MRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRPYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMATNIPPHNL EV+D LY
Sbjct: 121 DIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMATNIPPHNLNEVVDACLY 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII--------GFNK 428
H+LEGL +AL NID FI II++ TP AK +++ +W+ V ++
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSSLVRDMLTRAETENAAAGG 420
Query: 429 KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
++ ++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 RDAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI +I +EL +K ++G + RRS+I LNA +TEDLI QDMV+T+
Sbjct: 481 LLDILARPERITVMIGEELTAVKAEFG----DARRSKIELNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTHDYILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTHDYILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F + YVFM+T+LG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSADKYVFMTTALGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLDDAQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGRVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 L 849
+
Sbjct: 833 I 833
>gi|410421041|ref|YP_006901490.1| DNA gyrase subunit A [Bordetella bronchiseptica MO149]
gi|427815535|ref|ZP_18982599.1| DNA gyrase subunit A [Bordetella bronchiseptica 1289]
gi|427818088|ref|ZP_18985151.1| DNA gyrase subunit A [Bordetella bronchiseptica D445]
gi|427826010|ref|ZP_18993072.1| DNA gyrase subunit A [Bordetella bronchiseptica Bbr77]
gi|33574094|emb|CAE38419.1| DNA gyrase subunit A [Bordetella parapertussis]
gi|33576885|emb|CAE33965.1| DNA gyrase subunit A [Bordetella bronchiseptica RB50]
gi|408448336|emb|CCJ60017.1| DNA gyrase subunit A [Bordetella bronchiseptica MO149]
gi|410566535|emb|CCN24098.1| DNA gyrase subunit A [Bordetella bronchiseptica 1289]
gi|410569088|emb|CCN17173.1| DNA gyrase subunit A [Bordetella bronchiseptica D445]
gi|410591275|emb|CCN06373.1| DNA gyrase subunit A [Bordetella bronchiseptica Bbr77]
Length = 877
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/841 (63%), Positives = 689/841 (81%), Gaps = 10/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAMRYTE RL KI++ELL
Sbjct: 61 YHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAMRYTEIRLAKIAHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMATNIPPHNL EV+DG LY
Sbjct: 121 DIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMATNIPPHNLQEVVDGCLY 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
L NPECSI++LI++IPAPDFPT G+IYG++ V +GY TG+GRVI+RAKTH E+ + NR
Sbjct: 181 CLRNPECSIDELIELIPAPDFPTGGVIYGITGVREGYRTGRGRVIMRAKTHFEDMEKGNR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AI++D +PYQVNKK+L E+I++LV +KK+E IS++RDESDK GMR+VIELKR E+PE+V
Sbjct: 241 QAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDGMRLVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+EV+ RRT+F+LRKARE
Sbjct: 301 LNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIEYFLQHRREVVTRRTVFQLRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG---FNKKNYNT 433
H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V +++ +
Sbjct: 361 GHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARSWDSSLVREMLARVDGDAAGGVA 420
Query: 434 ISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLT 490
+ ++++ LQ + Y+LS+ QAQEIL M LQRLT +EQ KII +Y++V+ + DL
Sbjct: 421 AFRPDDLAPEYGLQGDGNYRLSETQAQEILNMRLQRLTGLEQDKIIGEYKDVMATIADLL 480
Query: 491 DILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSN 550
DIL+ +RI II++EL IK ++ + K+ RR+EI +NA TEDLI DMV+TLS+
Sbjct: 481 DILARPERITTIISEELQAIKAEFSTSAKDTRRAEIEVNATELDTEDLITPMDMVVTLSH 540
Query: 551 LGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVW 610
GYIKSQP+SEYR+QKRGGRGK+A K+ DW++QLFIANTHDY+LCFSN GR+YWLKVW
Sbjct: 541 GGYIKSQPLSEYRSQKRGGRGKQATAMKENDWVDQLFIANTHDYLLCFSNRGRVYWLKVW 600
Query: 611 QIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLS 670
++PQG+RNSRGKPI+NMF L + EK+TV+LP+ ++F +++YVFM+TS G VKKT LS
Sbjct: 601 EVPQGTRNSRGKPIVNMFPLADGEKVTVVLPV----KEFSEDHYVFMATSRGTVKKTPLS 656
Query: 671 NFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGV 730
+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSD+GKAVRF+EN VR MGR+ARGV
Sbjct: 657 DFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVRFDENDVRPMGRNARGV 716
Query: 731 IGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRN 790
GM LE+ Q VIALLV+ ++ QSVLTATENGYGKRT I EYT+H RGTKG+I+I+T+ RN
Sbjct: 717 RGMMLEEGQTVIALLVAGDETQSVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSSRN 776
Query: 791 GKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
G+VV A LV EIMLITTGG+L+RTRV+EIR+MGR+TQGV LI+V++ S L GV+R+
Sbjct: 777 GRVVGAVLVMPSDEIMLITTGGVLVRTRVAEIREMGRATQGVTLISVDDGSSLSGVRRVV 836
Query: 851 K 851
+
Sbjct: 837 E 837
>gi|412338598|ref|YP_006967353.1| DNA gyrase subunit A [Bordetella bronchiseptica 253]
gi|408768432|emb|CCJ53195.1| DNA gyrase subunit A [Bordetella bronchiseptica 253]
Length = 881
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/841 (63%), Positives = 689/841 (81%), Gaps = 10/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAMRYTE RL KI++ELL
Sbjct: 61 YHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAMRYTEIRLAKIAHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMATNIPPHNL EV+DG LY
Sbjct: 121 DIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMATNIPPHNLQEVVDGCLY 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
L NPECSI++LI++IPAPDFPT G+IYG++ V +GY TG+GRVI+RAKTH E+ + NR
Sbjct: 181 CLRNPECSIDELIELIPAPDFPTGGVIYGITGVREGYRTGRGRVIMRAKTHFEDMEKGNR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AI++D +PYQVNKK+L E+I++LV +KK+E IS++RDESDK GMR+VIELKR E+PE+V
Sbjct: 241 QAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDGMRLVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+EV+ RRT+F+LRKARE
Sbjct: 301 LNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIEYFLQHRREVVTRRTVFQLRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG---FNKKNYNT 433
H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V +++ +
Sbjct: 361 GHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARSWDSSLVREMLARVDGDAAGGVA 420
Query: 434 ISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLT 490
+ ++++ LQ + Y+LS+ QAQEIL M LQRLT +EQ KII +Y++V+ + DL
Sbjct: 421 AFRPDDLAPEYGLQGDGNYRLSETQAQEILNMRLQRLTGLEQDKIIGEYKDVMATIADLL 480
Query: 491 DILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSN 550
DIL+ +RI II++EL IK ++ + K+ RR+EI +NA TEDLI DMV+TLS+
Sbjct: 481 DILARPERITTIISEELQAIKAEFSTSAKDTRRAEIEVNATELDTEDLITPMDMVVTLSH 540
Query: 551 LGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVW 610
GYIKSQP+SEYR+QKRGGRGK+A K+ DW++QLFIANTHDY+LCFSN GR+YWLKVW
Sbjct: 541 GGYIKSQPLSEYRSQKRGGRGKQATAMKENDWVDQLFIANTHDYLLCFSNRGRVYWLKVW 600
Query: 611 QIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLS 670
++PQG+RNSRGKPI+NMF L + EK+TV+LP+ ++F +++YVFM+TS G VKKT LS
Sbjct: 601 EVPQGTRNSRGKPIVNMFPLADGEKVTVVLPV----KEFSEDHYVFMATSRGTVKKTPLS 656
Query: 671 NFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGV 730
+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSD+GKAVRF+EN VR MGR+ARGV
Sbjct: 657 DFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVRFDENDVRPMGRNARGV 716
Query: 731 IGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRN 790
GM LE+ Q VIALLV+ ++ QSVLTATENGYGKRT I EYT+H RGTKG+I+I+T+ RN
Sbjct: 717 RGMMLEEGQTVIALLVAGDETQSVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSSRN 776
Query: 791 GKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
G+VV A LV EIMLITTGG+L+RTRV+EIR+MGR+TQGV LI+V++ S L GV+R+
Sbjct: 777 GRVVGAVLVMPSDEIMLITTGGVLVRTRVAEIREMGRATQGVTLISVDDGSSLSGVRRVV 836
Query: 851 K 851
+
Sbjct: 837 E 837
>gi|410472335|ref|YP_006895616.1| DNA gyrase subunit A [Bordetella parapertussis Bpp5]
gi|408442445|emb|CCJ48985.1| DNA gyrase subunit A [Bordetella parapertussis Bpp5]
Length = 873
Score = 1154 bits (2986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/841 (63%), Positives = 689/841 (81%), Gaps = 10/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD S+YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAMRYTE RL KI++ELL
Sbjct: 61 YHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAMRYTEIRLAKIAHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+D+ET+DF NYDG E+EP +LP+R+PNLL+NGSSGIAVGMATNIPPHNL EV+DG LY
Sbjct: 121 DIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMATNIPPHNLQEVVDGCLY 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
L NPECSI++LI++IPAPDFPT G+IYG++ V +GY TG+GRVI+RAKTH E+ + NR
Sbjct: 181 CLRNPECSIDELIELIPAPDFPTGGVIYGITGVREGYRTGRGRVIMRAKTHFEDMEKGNR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AI++D +PYQVNKK+L E+I++LV +KK+E IS++RDESDK GMR+VIELKR E+PE+V
Sbjct: 241 QAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDGMRLVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMN++ALV+GQP+LLNLK+++ YF+ HR+EV+ RRT+F+LRKARE
Sbjct: 301 LNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIEYFLQHRREVVTRRTVFQLRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG---FNKKNYNT 433
H+LEGL +AL NID+FI II++ TP A+ +++ +W+ V +++ +
Sbjct: 361 GHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARSWDSSLVREMLARVDGDAAGGVA 420
Query: 434 ISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLT 490
+ ++++ LQ + Y+LS+ QAQEIL M LQRLT +EQ KII +Y++V+ + DL
Sbjct: 421 AFRPDDLAPEYGLQGDGNYRLSETQAQEILNMRLQRLTGLEQDKIIGEYKDVMATIADLL 480
Query: 491 DILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSN 550
DIL+ +RI II++EL IK ++ + K+ RR+EI +NA TEDLI DMV+TLS+
Sbjct: 481 DILARPERITTIISEELQAIKAEFSTSAKDTRRAEIEVNATELDTEDLITPMDMVVTLSH 540
Query: 551 LGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVW 610
GYIKSQP+SEYR+QKRGGRGK+A K+ DW++QLFIANTHDY+LCFSN GR+YWLKVW
Sbjct: 541 GGYIKSQPLSEYRSQKRGGRGKQATAMKENDWVDQLFIANTHDYLLCFSNRGRVYWLKVW 600
Query: 611 QIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLS 670
++PQG+RNSRGKPI+NMF L + EK+TV+LP+ ++F +++YVFM+TS G VKKT LS
Sbjct: 601 EVPQGTRNSRGKPIVNMFPLADGEKVTVVLPV----KEFSEDHYVFMATSRGTVKKTPLS 656
Query: 671 NFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGV 730
+FSNPRK+GIIAV+L + D+LIGA LTDG +D+MLFSD+GKAVRF+EN VR MGR+ARGV
Sbjct: 657 DFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVRFDENDVRPMGRNARGV 716
Query: 731 IGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRN 790
GM LE+ Q VIALLV+ ++ QSVLTATENGYGKRT I EYT+H RGTKG+I+I+T+ RN
Sbjct: 717 RGMMLEEGQTVIALLVAGDETQSVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSSRN 776
Query: 791 GKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
G+VV A LV EIMLITTGG+L+RTRV+EIR+MGR+TQGV LI+V++ S L GV+R+
Sbjct: 777 GRVVGAVLVMPSDEIMLITTGGVLVRTRVAEIREMGRATQGVTLISVDDGSSLSGVRRVV 836
Query: 851 K 851
+
Sbjct: 837 E 837
>gi|91784819|ref|YP_560025.1| DNA gyrase subunit A [Burkholderia xenovorans LB400]
gi|91688773|gb|ABE31973.1| DNA gyrase subunit A [Burkholderia xenovorans LB400]
Length = 882
Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/857 (63%), Positives = 689/857 (80%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFTPNYDGSENEPAILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L NPE +I++LI+I+PAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLKNPEATIDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRALTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARAWDSSLV 420
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + T +N +Q++ +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLSRAETENATAGGREAYRPDGLNPSFGMQSDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y V+ ++ DL DIL+ +RI II +EL IK ++G + RRS+I LNA
Sbjct: 481 DKIIGEYREVMAQIADLLDILARPERITAIIVEELTSIKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI Q+MV+T+S+ GY+KSQP+SEY AQKRGGRGK+A K++DWI+ LFIANTH
Sbjct: 537 LNTEDLITPQEMVVTMSHAGYVKSQPLSEYSAQKRGGRGKQATAMKEDDWIDTLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D+ILCFSN GR+Y +KV+++PQGSRNSRG+PIIN+F L+ EKITV+LP+ ++F +
Sbjct: 597 DHILCFSNRGRVYSVKVYEVPQGSRNSRGRPIINIFPLQEGEKITVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM T+LG VKKT L F + GIIAV L + D+LIGAA+TDG +D+MLFSDSGKA
Sbjct: 653 KFVFMGTALGTVKKTPLEAFGRVLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q VIALLV+ +++QSVLTATENG+GKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPIIEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV++ +IMLIT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDQEAQIMLITNTGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQV 849
>gi|187924985|ref|YP_001896627.1| DNA gyrase subunit A [Burkholderia phytofirmans PsJN]
gi|187716179|gb|ACD17403.1| DNA gyrase, A subunit [Burkholderia phytofirmans PsJN]
Length = 878
Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/857 (63%), Positives = 689/857 (80%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +ELL D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIGHELLADIDKETVDFTPNYDGSENEPAILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D ++L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACQHLLKNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA TH EE +R R +II+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSG
Sbjct: 241 VMRALTHFEEIDRGQRMSIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP AK +++ W+ V
Sbjct: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLV 420
Query: 421 SKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + T +N +Q++ +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLSRAETENATAGGRDAYRPDGLNPSFGMQSDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y V+ ++ DL DIL+ +RI II DEL IK ++G + RRS+I LNA
Sbjct: 481 DKIIGEYREVMAQIADLLDILARPERITAIIVDELTSIKAEFG----DARRSKIELNATE 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+TEDLI Q+MV+T+S+ GY+KSQP+SEY AQKRGGRGK+A K++DWI+ LFIANTH
Sbjct: 537 LNTEDLITPQEMVVTMSHAGYVKSQPLSEYSAQKRGGRGKQATAMKEDDWIDTLFIANTH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D+ILCFSN GR+Y +KV+++PQGSRNSRG+PIIN+F L+ EKITV+LP+ ++F +
Sbjct: 597 DHILCFSNRGRVYSVKVYEVPQGSRNSRGRPIINIFPLQEGEKITVVLPV----KEFSAD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
+VFM T+LG VKKT L F + GIIAV L + D+LIGAA+TDG +D+MLFSDSGKA
Sbjct: 653 KFVFMGTALGTVKKTPLEAFGRVLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+EN VR MGR ARGV GM+LE Q VIALLV+ +++QSVLTATENG+GKRT I EYT
Sbjct: 713 VRFDENDVRPMGREARGVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPITEYT 772
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+H RGTKG+I+I+T++RNGKVVAATLV++ +IMLIT G+LIRTRVSEIR+MGR+TQGV
Sbjct: 773 RHGRGTKGMIAIQTSERNGKVVAATLVDQEAQIMLITNTGVLIRTRVSEIREMGRATQGV 832
Query: 833 ILITVENKSKLCGVQRL 849
LI+++ +KL G+Q++
Sbjct: 833 TLISLDEGTKLSGLQQV 849
>gi|421867224|ref|ZP_16298883.1| DNA gyrase subunit A [Burkholderia cenocepacia H111]
gi|444362066|ref|ZP_21162632.1| DNA gyrase, A subunit [Burkholderia cenocepacia BC7]
gi|444371936|ref|ZP_21171442.1| DNA gyrase, A subunit [Burkholderia cenocepacia K56-2Valvano]
gi|358072638|emb|CCE49761.1| DNA gyrase subunit A [Burkholderia cenocepacia H111]
gi|443594422|gb|ELT63076.1| DNA gyrase, A subunit [Burkholderia cenocepacia K56-2Valvano]
gi|443597531|gb|ELT65952.1| DNA gyrase, A subunit [Burkholderia cenocepacia BC7]
Length = 851
Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/841 (64%), Positives = 680/841 (80%), Gaps = 16/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E +PSVLP+RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFEPNYDGNEMQPSVLPSRIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLGNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+EV+ RRTI+ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRREVLTRRTIYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII--------GFNK 428
H+LEGL +AL NID FI II++ TP AK +++ W+ V +++
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKPWDSSLVREMLTRAESENAAAGG 420
Query: 429 KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 RSAYRPEGLNPAFGMQADGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI +I +EL +K ++G + RRS I LNA +TEDLI QDMV+T+
Sbjct: 481 LLDILARPERITTMIGEELTAVKAEFG----DARRSRIELNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTHDYILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTHDYILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F + ++FM+TSLG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSADKFIFMATSLGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L D+LIGA++TDG++D+MLFSDSGKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDSGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q+VIALLV+ +++Q+VLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQQVIALLVAGSEEQTVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 L 849
+
Sbjct: 833 I 833
>gi|167570796|ref|ZP_02363670.1| DNA gyrase subunit A [Burkholderia oklahomensis C6786]
Length = 850
Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/842 (64%), Positives = 686/842 (81%), Gaps = 18/842 (2%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNRP+ K AR+VG+ +GK
Sbjct: 1 MRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRPYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMATNIPPHNL EV+D LY
Sbjct: 121 DIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMATNIPPHNLNEVVDACLY 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRATTHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+ QPKLLNLKEIL F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDNQPKLLNLKEILQCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII---------GFN 427
H+LEGL +AL NID+FI II++ TP AK +++ +W+ V +++
Sbjct: 361 GHVLEGLAVALANIDDFIAIIKAAPTPPIAKQELMAKSWDSSLVREMLTRAETENAAAGG 420
Query: 428 KKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
++ Y ++ +Q + Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++
Sbjct: 421 REAYRP-EGLSPAFGMQGDGFYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIA 479
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL DIL+ +RI +I +ELN +K ++G + RRS+I LNA +TEDLI QDMV+T
Sbjct: 480 DLLDILARPERITVMIGEELNAVKVEFG----DARRSKIELNATELNTEDLITPQDMVVT 535
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTHDYILCFSN GR+YW+
Sbjct: 536 MSHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTHDYILCFSNRGRVYWV 595
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ R+F + YVFM+T+LG VKKT
Sbjct: 596 KVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----REFSADKYVFMTTALGTVKKT 651
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L FS P K GIIAV L D+LIGAA+TDG++D+MLFSD+GKAVRF+EN VR MGR A
Sbjct: 652 PLEAFSRPMKKGIIAVGLDEGDYLIGAAITDGAHDVMLFSDAGKAVRFDENDVRPMGREA 711
Query: 728 RGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTN 787
RGV GM+L++ Q+VIA+LV+ +++QSVLTATENG+GKRT I EYT+H RGTKG+I+I+T+
Sbjct: 712 RGVRGMQLDEGQQVIAMLVAGSEEQSVLTATENGFGKRTPITEYTRHGRGTKGMIAIQTS 771
Query: 788 KRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQ 847
+RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q
Sbjct: 772 ERNGRVVAATLVDPEDQIMLITTAGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQ 831
Query: 848 RL 849
++
Sbjct: 832 QI 833
>gi|170732351|ref|YP_001764298.1| DNA gyrase subunit A [Burkholderia cenocepacia MC0-3]
gi|169815593|gb|ACA90176.1| DNA gyrase, A subunit [Burkholderia cenocepacia MC0-3]
Length = 851
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/841 (64%), Positives = 681/841 (80%), Gaps = 16/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E +PSVLP+RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFEPNYDGNEMQPSVLPSRIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLGNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+EV+ RRTI+ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRREVLTRRTIYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII--------GFNK 428
H+LEGL +AL NID FI II++ TP AK +++ W+ V +++
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKPWDSSLVREMLTRAESENAAAGG 420
Query: 429 KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 RSAYRPEGLNPAFGMQTDGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI +I DEL +K ++G + RRS+I LNA +TEDLI QDMV+T+
Sbjct: 481 LLDILARPERITTMIGDELTSVKAEFG----DARRSKIELNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTHDYILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTHDYILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F + ++FM+TSLG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSADKFIFMATSLGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L D+LIGA++TDG++D+MLFSD+GKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDAGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q+VIA+LV+ +++Q+VLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQQVIAMLVAGSEEQTVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV+ +IMLITT G+LIRTRVSE+R+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEVREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 L 849
+
Sbjct: 833 I 833
>gi|416993029|ref|ZP_11938868.1| DNA gyrase subunit A [Burkholderia sp. TJI49]
gi|325518448|gb|EGC98150.1| DNA gyrase subunit A [Burkholderia sp. TJI49]
Length = 851
Score = 1152 bits (2979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/843 (64%), Positives = 682/843 (80%), Gaps = 16/843 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDSAVYETIVRMAQDFSLRYMLVDGQGNFGSIDGDNAAAMRYTEIRMAKIGHELLS 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E +P +LP RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFGPNYDGSEMQPLILPARIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L+NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLNNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII--------GFNK 428
H+LEGL +AL NID FI II++ TP AK +++ W+ V +++
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKAWDSSLVREMLTRAESENAAAGG 420
Query: 429 KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
++ +N +Q + +YKLSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 RDAYRPEGLNPAFGMQGDGLYKLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI +I DEL +K ++G + RRS I LNA +TEDLI QDMV+T+
Sbjct: 481 LLDILARPERITTMIGDELTSVKAEFG----DARRSRIELNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTHDY+LCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTHDYMLCFSNRGRVYWIK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F + +VFM+TSLG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSADKFVFMATSLGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L + D+LIGA++TDG++D+MLFSD+GKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPMKKGIIAVGLDDGDYLIGASITDGAHDVMLFSDAGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q+VIALLV+ +++QSVLTATENG+GKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQQVIALLVAGSEEQSVLTATENGFGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 LCK 851
+ +
Sbjct: 833 IAE 835
>gi|145588680|ref|YP_001155277.1| DNA gyrase subunit A [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047086|gb|ABP33713.1| DNA gyrase subunit A [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 900
Score = 1152 bits (2979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/877 (62%), Positives = 691/877 (78%), Gaps = 32/877 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M Q AKE + I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WN
Sbjct: 1 MEQAAKETLPISLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMYELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI+++LL DLDKET+DF NYDG EKEP +LP ++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLRKIAHDLLADLDKETVDFGPNYDGSEKEPLILPAKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI L+VLHNPEC+I++LI+IIPAPDFPTAGIIYG+ V +GY TG+GRV
Sbjct: 181 NIPPHNLDEVISACLHVLHNPECTIDELIEIIPAPDFPTAGIIYGVQGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ ++ R AII+DELPYQVNKK+LLE+I++LV EKK+E IS+LRDESDKSG
Sbjct: 241 VMRAKTHFEDLDKGARQAIIVDELPYQVNKKNLLERIAELVNEKKVEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+ FGMNM+ALV+ QP+LLNLK++L YF+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKSTQLQDNFGMNMVALVDNQPRLLNLKQMLEYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ H+LEGL +AL NID FI II++ + P AK +++ W+ V
Sbjct: 361 VVTRRTIFELRKARDRGHVLEGLAVALANIDEFIAIIKAAANPVVAKQELMGKAWDSSMV 420
Query: 421 SKIIGFNKKNYNTISKINNISK--------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + +T N +Q +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLA--RAETDTPGGRNAYRPEGLLPEYGMQTTGLYRLSDSQAQEILQMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNI-RRSEIILNAI 531
KI+N+Y+ V+ ++ DL D+L+ +R+ ++I EL ++ ++G + RRS I +NA
Sbjct: 479 DKIVNEYKEVMSEISDLLDLLAKPERVTQVIETELKEVQAEFGVAGGDTGRRSFIEMNAT 538
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
TEDLI QDMV+TLSN GY+KSQP+SEYRAQKRGGRGK+A TK+EDWI+ LF+ANT
Sbjct: 539 ELFTEDLITPQDMVVTLSNTGYMKSQPLSEYRAQKRGGRGKQAAATKNEDWIDTLFVANT 598
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HD ILCFS+ GR+YWLKVW++PQGSR SRGKPI+NMF L EKITVILP+ + +
Sbjct: 599 HDIILCFSDRGRMYWLKVWEVPQGSRTSRGKPIVNMFPLIEGEKITVILPI----KGYQD 654
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
++YVFM+TSLG VKKT LS+FSNPRK+GIIAV+L+ DFL+GAA+TDG +D+MLFSD+GK
Sbjct: 655 DHYVFMATSLGTVKKTRLSDFSNPRKAGIIAVDLNENDFLVGAAITDGQHDVMLFSDAGK 714
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQ-----------------KQSV 754
AVRF+EN VR MGR+ARGV GM L +VIA+LV+ + SV
Sbjct: 715 AVRFDENDVRPMGRTARGVRGMNLGDGHQVIAMLVAPAEAAEGAEAAVVDANGAAIPSSV 774
Query: 755 LTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGIL 814
LTATENGYGKRT I EYT+H RGTKG+I+I+T +RNGKVVAA LV+ +IMLITTGGIL
Sbjct: 775 LTATENGYGKRTPIAEYTRHGRGTKGMIAIQTTERNGKVVAAALVSPEDQIMLITTGGIL 834
Query: 815 IRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
+RTRVSEIR+MGR+TQGV LI V+ ++L G+QR+ +
Sbjct: 835 VRTRVSEIREMGRATQGVTLINVDEGTRLSGLQRIAE 871
>gi|209519336|ref|ZP_03268135.1| DNA gyrase, A subunit [Burkholderia sp. H160]
gi|209500220|gb|EEA00277.1| DNA gyrase, A subunit [Burkholderia sp. H160]
Length = 860
Score = 1152 bits (2979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/843 (64%), Positives = 683/843 (81%), Gaps = 16/843 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF+ NYDG E EP++LP RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFVPNYDGSENEPAILPARIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLKNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRALTHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLTCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTIS- 435
H+LEGL +AL NID FI +I++ TP AK +++ W+ V +++ + + +
Sbjct: 361 GHVLEGLAVALANIDEFIALIKAAPTPPIAKQELMSRAWDSSLVREMLSRAETDNASAGG 420
Query: 436 -------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
+N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 REAYRPEGLNPSFGMQADGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI II DEL IK ++G + RRS+I LNA +TEDLI Q+MV+T+
Sbjct: 481 LLDILARPERISAIIVDELTSIKAEFG----DARRSKIELNATELNTEDLITPQEMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTHD+ILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATSMKEDDWIDTLFIANTHDHILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L+ EKITV+LP+ ++F + +VFM+T+LG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQEGEKITVVLPV----KEFSADKFVFMATALGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P + GIIAV L D+LIGAA+TDG +D+MLFSDSGKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPLRKGIIAVGLDEGDYLIGAAITDGQHDVMLFSDSGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q VIALLV+ +++QSVLTATENG+GKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDPEAQIMLITTTGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 LCK 851
+ +
Sbjct: 833 VAE 835
>gi|307730628|ref|YP_003907852.1| DNA gyrase subunit A [Burkholderia sp. CCGE1003]
gi|307585163|gb|ADN58561.1| DNA gyrase, A subunit [Burkholderia sp. CCGE1003]
Length = 862
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/866 (63%), Positives = 689/866 (79%), Gaps = 20/866 (2%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFTPNYDGSENEPAILPARIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L NP+ SI++LI+I+PAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLKNPDASIDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRALTHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII---------GFN 427
H+LEGL +AL NID FI II++ TP AK +++ W+ V +++
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLVREMLSRAETENASAGG 420
Query: 428 KKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
++ Y +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++
Sbjct: 421 REAYRP-DGLNPSFGMQADGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIA 479
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL DIL+ +RI II DEL IK ++G + RRS+I LNA +TEDLI Q+MV+T
Sbjct: 480 DLLDILARPERITAIIVDELTSIKAEFG----DARRSKIELNATELNTEDLITPQEMVVT 535
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
+S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTHD+ILCFSN GR+YW+
Sbjct: 536 MSHAGYVKSQPLSEYRAQKRGGRGKQATSMKEDDWIDTLFIANTHDHILCFSNRGRVYWV 595
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+++PQGSRNSRG+PI+NMF L+ EKITV+LP+ ++F + +VFM+T+LG VKKT
Sbjct: 596 KVYEVPQGSRNSRGRPIVNMFPLQEGEKITVVLPV----KEFSADKFVFMATALGTVKKT 651
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L FS P + GIIAV L + D+LIGAA+TDG +D+MLFSDSGKAVRF+EN VR MGR A
Sbjct: 652 PLEAFSRPLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKAVRFDENDVRPMGREA 711
Query: 728 RGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTN 787
RGV GM+LE Q VIALLV+ +++QSVLTATENG+GKRT I EYT+H RGTKG+I+I+T+
Sbjct: 712 RGVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPITEYTRHGRGTKGMIAIQTS 771
Query: 788 KRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQ 847
+RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q
Sbjct: 772 ERNGKVVAATLVDPEAQIMLITTTGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQ 831
Query: 848 RLCKITMIKKYIPVITIDGPTASGKG 873
++ + +GP SG G
Sbjct: 832 QVAEAEAEGDLEG--DAEGPAESGNG 855
>gi|170698422|ref|ZP_02889495.1| DNA gyrase, A subunit [Burkholderia ambifaria IOP40-10]
gi|170136675|gb|EDT04930.1| DNA gyrase, A subunit [Burkholderia ambifaria IOP40-10]
Length = 851
Score = 1150 bits (2976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/841 (64%), Positives = 679/841 (80%), Gaps = 16/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E +P+VLP+RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFEPNYDGNEMQPAVLPSRIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L+N E +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLNNSEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRATTHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKEIL F+ HR+EV+ RRTI+ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEILQCFLSHRREVLTRRTIYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII--------GFNK 428
H+LEGL +AL NID FI II++ TP AK +++ W+ V +++
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKPWDSSLVREMLTRAETENASAGG 420
Query: 429 KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y V+ ++ D
Sbjct: 421 RSAYRPEGLNPAFGMQTDGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYREVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI +I DEL +K ++G + RRS I LNA +TEDLI QDMV+T+
Sbjct: 481 LLDILARPERITTMIGDELTSVKAEFG----DARRSRIELNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTHDYILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTHDYILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L+ EKI V+LP+ ++F + +VFM+TSLG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPV----KEFSADKFVFMATSLGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L D+LIGA++TDG++D+MLFSDSGKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPMKKGIIAVGLDEGDYLIGASITDGAHDVMLFSDSGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q+VIALLV+ +++Q+VLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQQVIALLVAGSEEQTVLTATENGYGKRTPIAEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDAEDQIMLITTAGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 L 849
+
Sbjct: 833 V 833
>gi|323526962|ref|YP_004229115.1| DNA gyrase subunit A [Burkholderia sp. CCGE1001]
gi|323383964|gb|ADX56055.1| DNA gyrase, A subunit [Burkholderia sp. CCGE1001]
Length = 862
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/843 (64%), Positives = 682/843 (80%), Gaps = 16/843 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFTPNYDGSENEPAILPARIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLKNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRALTHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII--------GFNK 428
H+LEGL +AL NID FI II++ TP AK +++ W+ V +++
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLVREMLSRAETENASAGG 420
Query: 429 KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 RDAYRPDGLNPSFGMQADGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI II DEL IK ++G + RRS+I LNA +TEDLI Q+MV+T+
Sbjct: 481 LLDILARPERITAIIVDELTSIKAEFG----DARRSKIELNATELNTEDLITPQEMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTHD+ILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATSMKEDDWIDTLFIANTHDHILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L+ EKITV+LP+ ++F + +VFM+T+LG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQEGEKITVVLPV----KEFSADKFVFMATALGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P + GIIAV L + D+LIGAA+TDG +D+MLFSDSGKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q VIALLV+ +++QSVLTATENG+GKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDPEAQIMLITTTGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 LCK 851
+ +
Sbjct: 833 VAE 835
>gi|167619125|ref|ZP_02387756.1| DNA gyrase subunit A [Burkholderia thailandensis Bt4]
Length = 850
Score = 1149 bits (2972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/841 (63%), Positives = 684/841 (81%), Gaps = 16/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WNRP+ K AR+VG+ +GK
Sbjct: 1 MRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRPYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ +I +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAQIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E +P +LP+RIPNLLINGSSGIAVGMATNIPPHNL EV+D LY
Sbjct: 121 DIDKETVDFGPNYDGSEMQPLILPSRIPNLLINGSSGIAVGMATNIPPHNLNEVVDACLY 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L+NP+ S+++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLNNPQASVDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+ QPKLLNL+EIL F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDNQPKLLNLREILQCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTISK 436
H+LEGL +AL NID FI II++ TP AK +++ +W+ V +++ +
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMAKSWDSSLVREMLTRAEAENAAAGG 420
Query: 437 --------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
++ +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 RAAYRPEGLSPAFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI +I +EL +K ++G + RRS+I LNA +TEDLI QDMV+T+
Sbjct: 481 LLDILARPERITVMIGEELAAVKAEFG----DARRSKIELNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI LFIANTHDYILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIETLFIANTHDYILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F + YVFM+T+LG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSADKYVFMTTALGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L + D+LIGAA+TDG++D+MLFSD+GKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPMKKGIIAVGLDDGDYLIGAAITDGAHDVMLFSDAGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+L+ Q+VIA+LV+ +++QSVLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLDDGQQVIAMLVAGSEEQSVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGRVVAATLVDTEDQIMLITTAGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 L 849
+
Sbjct: 833 I 833
>gi|171463936|ref|YP_001798049.1| DNA gyrase subunit A [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193474|gb|ACB44435.1| DNA gyrase, A subunit [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 902
Score = 1149 bits (2972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/876 (62%), Positives = 690/876 (78%), Gaps = 32/876 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M Q AKE + I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WN
Sbjct: 1 MEQAAKETLPISLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMYELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ELL DLDKET+DF NYDG EKEP +LP ++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLRKIAHELLADLDKETVDFGPNYDGSEKEPLILPAKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+ L+VLHNPEC+I++LI+IIPAPDFPTAGIIYG+ V +GY TG+GRV
Sbjct: 181 NIPPHNLDEVVTACLHVLHNPECTIDELIEIIPAPDFPTAGIIYGVQRVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E+ ++ R AII+DELPYQVNKK+LLE+I++LV EKK+E IS+LRDESDKSG
Sbjct: 241 VMRAKTHFEDLDKGTRQAIIVDELPYQVNKKNLLERIAELVNEKKVEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK TQLQ+ FGMNM+ALV+ QP+LLNLK++L YF+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKSTQLQDNFGMNMVALVDNQPRLLNLKQMLEYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ H LEGL +AL NID FI II++ + P AK +++ W+ V
Sbjct: 361 VVTRRTIFELRKARDRGHALEGLAVALANIDEFIAIIKAAANPVIAKQELMGKAWDSSMV 420
Query: 421 SKIIGFNKKNYNTISKINNISK--------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + +T N +Q +Y+LSD QAQEIL+M LQRLT +EQ
Sbjct: 421 REMLA--RAETDTPGGRNAYRPEGLLPEYGMQTTGLYRLSDSQAQEILQMRLQRLTGLEQ 478
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNI-RRSEIILNAI 531
KI+N+Y+ V+ ++ DL D+L+ +R+ ++I EL +++++G + RRS I +NA
Sbjct: 479 DKIVNEYKEVMAEISDLLDLLAKPERVTQVIEAELKEVQSEFGVAGGDTGRRSFIEVNAT 538
Query: 532 NPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT 591
TEDLI QD+V+TLSN GY+KSQP+SEYRAQKRGGRGK+A TK+EDWI LF+ANT
Sbjct: 539 ELFTEDLITPQDLVVTLSNTGYMKSQPLSEYRAQKRGGRGKQAAATKNEDWIETLFVANT 598
Query: 592 HDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPK 651
HD ILCFS+ GR+YWLKVW++PQGSR SRGKPI+NMF L EKITVILP+ + +
Sbjct: 599 HDTILCFSDRGRMYWLKVWEVPQGSRTSRGKPIVNMFPLIEGEKITVILPI----KGYQD 654
Query: 652 NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGK 711
N YVFM+TSLG VKKT LS+FSNPRK+GIIAV+L+ DFL+GAA+TDG +D+MLFSD+GK
Sbjct: 655 NQYVFMATSLGTVKKTRLSDFSNPRKAGIIAVDLNENDFLVGAAITDGQHDVMLFSDAGK 714
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQ-----------------KQSV 754
AVRF+EN VR MGR+ARGV GM L + +VIA+LV+ + SV
Sbjct: 715 AVRFDENDVRPMGRTARGVRGMNLGEGHQVIAMLVAPAEAAEGVEAAVVDANGIAIPSSV 774
Query: 755 LTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGIL 814
LTATENGYGKRT I EYT+H RGTKG+I+I+T++RNGKVVAA LV+ +IMLITTGG+L
Sbjct: 775 LTATENGYGKRTPITEYTRHGRGTKGMIAIQTSERNGKVVAAALVSPEDQIMLITTGGVL 834
Query: 815 IRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
+RTRVSEIR+MGR+TQGV LI V+ ++L G+QR+
Sbjct: 835 VRTRVSEIREMGRATQGVTLINVDEGTRLSGLQRIA 870
>gi|170693711|ref|ZP_02884869.1| DNA gyrase, A subunit [Burkholderia graminis C4D1M]
gi|170141493|gb|EDT09663.1| DNA gyrase, A subunit [Burkholderia graminis C4D1M]
Length = 868
Score = 1149 bits (2971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/843 (63%), Positives = 686/843 (81%), Gaps = 16/843 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFTPNYDGSENEPAILPARIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L NPE +I++LI+I+PAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLKNPEATIDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRALTHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTIS- 435
H+LEGL +AL NID FI II++ TP AK +++ W+ V +++ ++ +
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLVREMLSRAEQENASAGG 420
Query: 436 -------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
+N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 REAYRPDGLNPSFGMQADGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI II DEL IK+++G + RRS+I LNA +TEDLI Q+MV+T+
Sbjct: 481 LLDILARPERITAIIVDELTSIKSEFG----DARRSKIELNATELNTEDLITPQEMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTHD+ILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATSMKEDDWIDTLFIANTHDHILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F + +VFM+T+LG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPV----KEFSADKFVFMATALGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P + GIIAV L + D+LIGAA+TDG +D+MLFSDSGKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+L++ Q VIALLV+ +++QSVLTATENG+GKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLDEGQNVIALLVAGDEQQSVLTATENGFGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNG+VVAATLV++ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGRVVAATLVDQEAQIMLITTTGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 LCK 851
+ +
Sbjct: 833 VAE 835
>gi|295677285|ref|YP_003605809.1| DNA gyrase subunit A [Burkholderia sp. CCGE1002]
gi|295437128|gb|ADG16298.1| DNA gyrase, A subunit [Burkholderia sp. CCGE1002]
Length = 860
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/843 (63%), Positives = 684/843 (81%), Gaps = 16/843 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF+ NYDG E EP++LP RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFVPNYDGSENEPAILPARIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L NPE +I++LI+IIPAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLKNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRALTHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLTCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTIS- 435
H+LEGL +AL NID FI +I++ TP AK +++ +W+ V +++ + + +
Sbjct: 361 GHVLEGLAVALANIDEFIALIKAAPTPPIAKQELMSRSWDSSLVREMLSRAETDNASAGG 420
Query: 436 -------KINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
+N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KII +Y +V+ ++ D
Sbjct: 421 REAYRPEGLNPSFGMQADGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI II +EL IK ++G + RRS+I LNA +TEDLI Q+MV+T+
Sbjct: 481 LLDILARPERISAIIVEELTSIKAEFG----DARRSKIELNATELNTEDLITPQEMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTHD+ILCFSN GR+YW+K
Sbjct: 537 SHAGYVKSQPLSEYRAQKRGGRGKQATSMKEDDWIDTLFIANTHDHILCFSNRGRVYWVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L+ EKITV+LP+ ++F + +VFM+T+LG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLQEGEKITVVLPV----KEFSADKFVFMATALGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P + GIIAV L D+LIGAA+TDG +D+MLFSDSGKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPLRKGIIAVGLDEGDYLIGAAITDGQHDVMLFSDSGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q VIALLV+ +++QSVLTATENG+GKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNG+VVAATLV+ +IMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGRVVAATLVDPEAQIMLITTTGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 LCK 851
+ +
Sbjct: 833 VAE 835
>gi|420250083|ref|ZP_14753311.1| DNA gyrase, A subunit [Burkholderia sp. BT03]
gi|398062536|gb|EJL54307.1| DNA gyrase, A subunit [Burkholderia sp. BT03]
Length = 859
Score = 1148 bits (2969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/843 (63%), Positives = 687/843 (81%), Gaps = 16/843 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SY++YAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYIEYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDSAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMATNIPPHNLTE++D +
Sbjct: 121 DIDKETVDFQPNYDGSENEPTILPARIPNLLINGSSGIAVGMATNIPPHNLTEIVDACHH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L NPE +I++LI+I+PAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLKNPEATIDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRATTHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE++
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVI 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L +F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSHFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII--------GFNK 428
H+LEGL +AL NID+FI II++ TP AK ++++ W+ V +++
Sbjct: 361 GHVLEGLAVALANIDDFIAIIKAAPTPPIAKQELMDRPWDSSIVREMLQRAETDNASSGG 420
Query: 429 KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
++ +N +Q + +Y+LSD QAQEIL+M LQRLT +EQ KI+++Y +V+ ++ D
Sbjct: 421 RSAYRPEGLNPAYGMQVDGLYRLSDTQAQEILQMRLQRLTGLEQDKILSEYRDVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI II DEL IK+++G RRS I +NA +TEDLI QDMV+T+
Sbjct: 481 LLDILARPERITSIIFDELVSIKSEFGDE----RRSRIEMNATELNTEDLITPQDMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTHD+ILCFSN GR+YWLK
Sbjct: 537 SHSGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIDTLFIANTHDHILCFSNRGRVYWLK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PI+NMF L + EKITV+LP+ ++F + ++FM+T+LG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIVNMFPLLDGEKITVVLPV----KEFSADKFIFMATALGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L FS P K GIIAV L + D+LIGAA+TDG +D+MLFSDSGKAVRF+EN VR MGR AR
Sbjct: 653 LEAFSRPLKKGIIAVGLDDGDYLIGAAITDGEHDVMLFSDSGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q+VIALLV+ ++++SVLTATENGYGKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQQVIALLVAGDEQESVLTATENGYGKRTPITEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV+ +IMLIT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDAEAQIMLITNTGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 LCK 851
+ +
Sbjct: 833 VAE 835
>gi|377821437|ref|YP_004977808.1| DNA gyrase subunit A [Burkholderia sp. YI23]
gi|357936272|gb|AET89831.1| DNA gyrase subunit A [Burkholderia sp. YI23]
Length = 865
Score = 1141 bits (2951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/839 (63%), Positives = 680/839 (81%), Gaps = 14/839 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRR L++MHE+NN WNRP+ K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRALYSMHELNNDWNRPYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD S+Y+ +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDASVYETIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E EP VLP RIPNLLINGS+GIAVGMATNIPPHNL E++D L+
Sbjct: 121 DIDKETVDFGPNYDGSESEPLVLPARIPNLLINGSAGIAVGMATNIPPHNLREIVDACLH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L+ PE ++++LI+I+PAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLNTPEATVDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DE+PYQVNK++LLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE++
Sbjct: 241 MAIIVDEIPYQVNKRTLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVI 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYKQTQLQ+TFGMNM+ALV+GQPKLLNLKE++ F+ HR+EV+ RRT++ELRKAR+
Sbjct: 301 LNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKEMIECFLSHRREVLTRRTVYELRKARDR 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN---- 432
H+LEGL +AL NID+FI II++ TP AK +++ W+ V +++ + +
Sbjct: 361 GHVLEGLAVALANIDDFIAIIKAAPTPPIAKQELMAKPWDSSLVREMLTRAETEASGGRL 420
Query: 433 --TISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLT 490
+N LQ + +YKLSD+QAQEIL+M LQRLT +EQ KI+++Y +V+ ++ DL
Sbjct: 421 AYRPEGLNPAYGLQADGLYKLSDVQAQEILQMRLQRLTGLEQDKIVSEYRDVMAQIADLL 480
Query: 491 DILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSN 550
DIL+ +RI ++I +EL I+ ++G RRS I +NA +TEDLI DMV+T+S+
Sbjct: 481 DILARPERIRQMIVEELGQIRAEFGDD----RRSRIEMNATELNTEDLITPTDMVVTMSH 536
Query: 551 LGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVW 610
GY+KSQP+SEYRAQKRGGRGK+A K++DWI+ LFIANTHD++LCFSN GR+YW+KV+
Sbjct: 537 SGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIDTLFIANTHDHMLCFSNRGRVYWIKVY 596
Query: 611 QIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLS 670
++PQGSRNSRG+PI+NMF L++ EKI V+LP+ ++F + YVFM+T+LG VKKT L
Sbjct: 597 EVPQGSRNSRGRPIVNMFPLQDGEKINVVLPI----KEFSADKYVFMTTALGTVKKTPLE 652
Query: 671 NFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGV 730
FS P K GIIAV L D+LIGAA+TDG +D+MLFSD+GKAVRF+EN VRAMGR ARGV
Sbjct: 653 AFSRPMKKGIIAVGLDEGDYLIGAAITDGEHDVMLFSDAGKAVRFDENDVRAMGREARGV 712
Query: 731 IGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRN 790
GM+LE Q+VIA+LV+ + QSVLTATENGYGKRT I EYT+H RGTKG+I+I+T++RN
Sbjct: 713 RGMQLEDGQQVIAMLVAGGENQSVLTATENGYGKRTPINEYTRHGRGTKGMIAIQTSERN 772
Query: 791 GKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
G+VVAATLV EIMLITT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q +
Sbjct: 773 GRVVAATLVEPESEIMLITTSGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQHI 831
>gi|456063817|ref|YP_007502787.1| DNA gyrase subunit A [beta proteobacterium CB]
gi|455441114|gb|AGG34052.1| DNA gyrase subunit A [beta proteobacterium CB]
Length = 891
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/861 (63%), Positives = 683/861 (79%), Gaps = 32/861 (3%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMYELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE RL KI++ELL
Sbjct: 61 YHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRLRKIAHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
DLDKET+DF NYDG EKEP +LP ++PNLLINGSSGIAVGMATNIPPHNL EV+ L+
Sbjct: 121 DLDKETVDFGPNYDGSEKEPLILPAKVPNLLINGSSGIAVGMATNIPPHNLDEVVTACLH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
VLHNPEC+I++LI+IIPAPDFPTAGIIYG+ V +GY TG+GRV++RAKTH E+ ++ R
Sbjct: 181 VLHNPECTIDELIEIIPAPDFPTAGIIYGVQGVREGYRTGRGRVVMRAKTHFEDLDKGAR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNKK+LLE+I++LV EKK+E IS+LRDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 QAIIVDELPYQVNKKNLLERIAELVNEKKVEGISDLRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+ FGMNM+ALV+ QP+LLNLK++L YF+ HR+EV+ RRTIFELRKARE
Sbjct: 301 LNNLYKSTQLQDNFGMNMVALVDNQPRLLNLKQMLEYFLQHRREVVTRRTIFELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTISK 436
H+LEGL +AL NID FI II++ + P AK++++ W+ V +++ + +T
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAANPVVAKSELMSKAWDSSMVREMLA--RAETDTPGG 418
Query: 437 INNISK--------LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
N +Q +Y+LSD QAQEIL+M LQRLT +EQ KI+N+Y++V+ ++ D
Sbjct: 419 RNAYRPEGLLPEYGMQTTGLYRLSDSQAQEILQMRLQRLTGLEQDKIVNEYKDVMAEISD 478
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYG-SHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
L D+L+ +R+ ++I EL ++ ++G + RRS I +NA TEDLI QDMV+T
Sbjct: 479 LLDLLAKPERVTQVIESELKEVQAEFGIAGGDTGRRSFIEMNATELFTEDLITPQDMVVT 538
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LSN GY+KSQP+SEYRAQKRGGRGK+A TK+EDWI LF+ANTHD ILCFS+ GR+YWL
Sbjct: 539 LSNTGYMKSQPLSEYRAQKRGGRGKQAAATKNEDWIETLFVANTHDIILCFSDRGRMYWL 598
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KVW++PQGSRNSRGKPI+NMF L EKITVILP+ + + ++YVFM+TSLG VKKT
Sbjct: 599 KVWEVPQGSRNSRGKPIVNMFPLIEGEKITVILPI----KGYQDDHYVFMATSLGTVKKT 654
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
LS+FSNPRK+GIIAV+L+ DFL+GAA+TDG +D+MLFSD+GKAVRF+EN VR MGR+A
Sbjct: 655 RLSDFSNPRKAGIIAVDLNENDFLVGAAITDGQHDVMLFSDAGKAVRFDENDVRPMGRTA 714
Query: 728 RGVIGMRLEKKQKVIALLVSNNQ-----------------KQSVLTATENGYGKRTLIKE 770
RGV GM L + +VIA+LV+ + SVLTATENG+GKRT I E
Sbjct: 715 RGVRGMNLGEGHQVIAMLVAPAEAAEGAEAAVLDANGLAIPSSVLTATENGFGKRTPIGE 774
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
YT+H RGTKG+I+I+T +RNGKVVAA LV+ +IMLITTGGIL+RTRVSEIR+MGR+TQ
Sbjct: 775 YTRHGRGTKGMIAIQTTERNGKVVAAALVSPEDQIMLITTGGILVRTRVSEIREMGRATQ 834
Query: 831 GVILITVENKSKLCGVQRLCK 851
GV LI V+ ++L G+QR+ +
Sbjct: 835 GVTLINVDEGTRLSGLQRIAE 855
>gi|319944279|ref|ZP_08018555.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Lautropia mirabilis
ATCC 51599]
gi|319742574|gb|EFV94985.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Lautropia mirabilis
ATCC 51599]
Length = 905
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/878 (60%), Positives = 694/878 (79%), Gaps = 11/878 (1%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
+QFAKE + I LE+EM +S+LDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN+WNR
Sbjct: 11 DQFAKETVPISLEQEMKRSFLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNVWNR 70
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
P++K ARVVG+ MGKYHPHGD +IYD +VRMAQ FSLR TLVDGQGNFGS+DGD AAMR
Sbjct: 71 PYLKSARVVGDVMGKYHPHGDSAIYDTVVRMAQDFSLRYTLVDGQGNFGSVDGDPPAAMR 130
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE RL KI++E+++D++K+T+DF NYDG EP VLP +IPNLLINGS+GIAV MATN
Sbjct: 131 YTEIRLRKIASEMVVDIEKDTVDFGPNYDGSTSEPQVLPAKIPNLLINGSTGIAVAMATN 190
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL EV+ L +L NP+ +I++LI+ IPAPDFPT +IYG++ V +GY TG+GRV+
Sbjct: 191 IPPHNLHEVVAACLLLLENPDATIDELIEKIPAPDFPTGALIYGVAGVREGYRTGRGRVV 250
Query: 242 IRAKTHIEEFNRE-NRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAKTH E+ ++ NR AII+DE+PYQVNK L +KI++LV EKK+E IS++RDESDK G
Sbjct: 251 MRAKTHFEDMDKAGNRQAIIVDEIPYQVNKAVLQQKIAELVNEKKIEGISDIRDESDKQG 310
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E E+VLN L+K TQLQ++FG+NM+ALV+GQP+LLNLK++L F+ HR+E
Sbjct: 311 MRVVIELKRGENAEVVLNNLFKLTQLQDSFGINMVALVDGQPRLLNLKQVLEAFLAHRRE 370
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++EL KAR+ H+LEGL +A+ N+D I++I+S+ TP AK +++ TW
Sbjct: 371 VVTRRTVYELNKARDRGHLLEGLAVAVVNVDEMIELIKSSPTPPVAKERLLARTWAAGIA 430
Query: 421 SKIIGFNKKNYNTISK--INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++++ + + + I+ + LQ + Y+LS++QA EIL+M LQRLT +EQ+KI+ +
Sbjct: 431 AEMVERAAGDVSALRPEGIDPNAGLQPDGTYQLSEVQAGEILQMRLQRLTGLEQEKIVTE 490
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y V+ +++DL DIL+ RI II DEL + ++G +K+ RRS+I LNA EDL
Sbjct: 491 YREVVDRILDLLDILAKPARITAIIRDELTGVVEEFGGPEKDPRRSQIELNASEIDIEDL 550
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I QDMV+TLSN GYIK+QP+SEYR+Q+RGGRGK+A TKD+DW++QLFIANTHD ILCF
Sbjct: 551 ITPQDMVVTLSNSGYIKAQPLSEYRSQRRGGRGKQAASTKDDDWVDQLFIANTHDTILCF 610
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YWLKVW++PQGSR SRG+PI+NMF L EKITV+LP+ + F +YVFM+
Sbjct: 611 SDRGRVYWLKVWEVPQGSRASRGRPIVNMFPLAENEKITVVLPI----KTFDDEHYVFMA 666
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TSLG VKKT LS+FSNPRK+GIIAV+L D+LIGAA+TDG +D+MLFSD+GKAVRF+E
Sbjct: 667 TSLGTVKKTALSDFSNPRKAGIIAVDLDEGDYLIGAAVTDGEHDVMLFSDAGKAVRFSEG 726
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VRAMGR+ARGV GM LE+ QKVIA+LV++++++SVLTATENGYGKRT + E+T+H RGT
Sbjct: 727 DVRAMGRTARGVRGMALEEGQKVIAMLVADDERRSVLTATENGYGKRTPLIEHTRHGRGT 786
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG+I+I++++RNG++VAA LV EIMLITTGG+L+RTRV EIR+MGR+TQGV LI VE
Sbjct: 787 KGMIAIQSSERNGRMVAAILVEEGDEIMLITTGGVLVRTRVDEIREMGRATQGVTLIGVE 846
Query: 839 NKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
L VQR+ V+ G +A G+ A
Sbjct: 847 EGDTLSRVQRVVG----SDSPEVLAAVGESADGEAAAA 880
>gi|385208544|ref|ZP_10035412.1| DNA gyrase, A subunit [Burkholderia sp. Ch1-1]
gi|385180882|gb|EIF30158.1| DNA gyrase, A subunit [Burkholderia sp. Ch1-1]
Length = 866
Score = 1130 bits (2922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/841 (63%), Positives = 678/841 (80%), Gaps = 16/841 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+NN WNR + K AR+VG+ +GK
Sbjct: 1 MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMRYTE R+ KI +ELL
Sbjct: 61 YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
D+DKET+DF NYDG E EP++LP RIPNLLINGSSGIAVGMATNIPPHNL EV+D +
Sbjct: 121 DIDKETVDFTPNYDGSENEPAILPARIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
+L NPE +I++LI+I+PAPDFPTAGIIYG++ V DGY TG+GRV++RA TH EE +R R
Sbjct: 181 LLKNPEATIDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRALTHFEEIDRGQR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
AII+DELPYQVNK+SLLE+I++LV EKKLE IS++RDESDKSGMR+VIELKR E+PE+V
Sbjct: 241 MAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LYK TQLQ+TFGMNM+ALV+GQPKLLNLKE+L F+ HR+EV+ RRT++ELRKARE
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRREVLTRRTVYELRKARER 360
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG-FNKKNYNTIS 435
H+LEGL +AL NID FI II++ TP AK +++ W+ V +++ +N +
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLVREMLARAETENASAGG 420
Query: 436 K-------INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
+ +N +Q++ +Y+LSD QAQEIL+M LQRLT +EQ KII +Y V+ ++ D
Sbjct: 421 REAYRPDGLNPSFGMQSDGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYREVMAQIAD 480
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L DIL+ +RI II +EL IK ++G + RRS+I LNA +TEDLI Q+MV+T+
Sbjct: 481 LLDILARPERITAIIVEELTSIKAEFG----DARRSKIELNATELNTEDLITPQEMVVTM 536
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GY+KSQP+SEY AQKRGGRGK+A K++DWI+ LFIANTHD+ILCFSN GR+Y +K
Sbjct: 537 SHAGYVKSQPLSEYSAQKRGGRGKQATAMKEDDWIDTLFIANTHDHILCFSNRGRVYSVK 596
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V+++PQGSRNSRG+PIIN+F L+ EKITV+LP+ ++F + +VFM T+LG VKKT
Sbjct: 597 VYEVPQGSRNSRGRPIINIFPLQEGEKITVVLPV----KEFSADKFVFMGTALGTVKKTP 652
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L F + GIIAV L + D+LIGAA+TDG +D+MLFSDSGKAVRF+EN VR MGR AR
Sbjct: 653 LEAFGRVLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKAVRFDENDVRPMGREAR 712
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV GM+LE Q VIALLV+ +++QSVLTATENG+GKRT I EYT+H RGTKG+I+I+T++
Sbjct: 713 GVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPIIEYTRHGRGTKGMIAIQTSE 772
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNGKVVAATLV++ +IMLIT G+LIRTRVSEIR+MGR+TQGV LI+++ +KL G+Q+
Sbjct: 773 RNGKVVAATLVDQEAQIMLITNTGVLIRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQ 832
Query: 849 L 849
+
Sbjct: 833 V 833
>gi|399116412|emb|CCG19217.1| DNA gyrase subunit A [Taylorella asinigenitalis 14/45]
Length = 894
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/861 (62%), Positives = 686/861 (79%), Gaps = 19/861 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYL Y+MSVIVGRALPDVRDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLSYSMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNSWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD AAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L DL+KET+DF SNYDG E EP +LPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLEKIAHEMLSDLEKETVDFGSNYDGSEFEPKILPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG LY L NP+CSI++L++ IPAPDFPT GIIYG S V +GY TG+GRV
Sbjct: 181 NIPPHNLSEVIDGCLYCLKNPDCSIDELVEYIPAPDFPTGGIIYGYSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTHIE+F + NR AI++DE+PYQVNKK+L EKI++LV KK+E IS++RDESDK G
Sbjct: 241 VMRAKTHIEDFEKGNRQAIVVDEIPYQVNKKTLQEKIAELVNGKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+ +++LN L+K TQLQ+TFGMN++ALVNGQPKLLNLKE++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVADVILNNLFKLTQLQDTFGMNLVALVNGQPKLLNLKELVVYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT++ELRKARE H LEGL +AL NID FIQ I+S+++P EA +++ W+ V
Sbjct: 361 VITRRTVYELRKAREEGHKLEGLAVALANIDEFIQTIKSSASPDEALERLMSKGWDSSLV 420
Query: 421 SKII----------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNM 470
++ GF K Y + L+ + +Y LS Q +EIL M L+RLT +
Sbjct: 421 KSLLSRVDEDQTLGGF--KAYRP-EGLPEEYGLREDRLYYLSYEQTREILNMNLRRLTGL 477
Query: 471 EQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNA 530
EQ+KII+ YE ++ + DL DIL+ +RI II +ELN IKN+Y K+ RRS+I A
Sbjct: 478 EQEKIISSYEAAMEAITDLLDILAKPERITTIIGEELNAIKNEY--TLKDTRRSQIEYQA 535
Query: 531 INPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIAN 590
TEDLI DMV+TLS GYIKSQP+SEY+AQ RGGRGKKA KD+D+I QLFIAN
Sbjct: 536 AEFETEDLITPMDMVVTLSKEGYIKSQPLSEYQAQNRGGRGKKATEMKDDDYIQQLFIAN 595
Query: 591 THDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFP 650
THDY+LCFS+ GRL+ LKVW++PQG+R S+GKPI+N+F L+ E+ITV+LP+ + F
Sbjct: 596 THDYVLCFSSLGRLHRLKVWEVPQGTRTSKGKPIVNLFDLQENERITVVLPI----KQFS 651
Query: 651 KNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSG 710
+ ++F++T+ GIVKKT LS +S+ RK +IAV L ++D+L+GA LTDG+ DIMLFSD+G
Sbjct: 652 DDQFIFLATAKGIVKKTALSQYSSTRKMAVIAVTLDDDDYLVGAELTDGNSDIMLFSDAG 711
Query: 711 KAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKE 770
KAVRF+E+SVRA GRS+RGV+GMRLE+ QK+I+L+VS +++ SVLTATENGYGKRT + +
Sbjct: 712 KAVRFDESSVRATGRSSRGVLGMRLEEGQKIISLIVSKDEQASVLTATENGYGKRTAVTD 771
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
YT+H RGTKG+I+I+T+ RNGKVVAA LV+ EIMLITT GI++RT+V +IR+MGR+TQ
Sbjct: 772 YTRHGRGTKGMIAIQTSDRNGKVVAAVLVHPEDEIMLITTDGIVVRTKVEQIREMGRATQ 831
Query: 831 GVILITVENKSKLCGVQRLCK 851
GV LI V+ +KL GVQR+ +
Sbjct: 832 GVTLIRVDQGTKLSGVQRVVE 852
>gi|399114943|emb|CCG17739.1| DNA gyrase subunit A [Taylorella equigenitalis 14/56]
Length = 895
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/858 (62%), Positives = 683/858 (79%), Gaps = 19/858 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYL Y+MSVIVGRALPDVRDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLSYSMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNSWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD AAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KIS+E+L DL+KET+DF NYDG E EP +LPT+IP LLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLEKISHEMLADLEKETVDFAPNYDGSEFEPKILPTKIPGLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L+ L NP+CSI++LI+ IPAPDFPT GIIYG S V +GY TG+GRV
Sbjct: 181 NIPPHNLSEVIDGCLFCLKNPDCSIDELIEYIPAPDFPTGGIIYGYSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTHIE+F + NR AIIIDE+PYQVNKK+L EKI+ LV EK++E IS++RDESDK G
Sbjct: 241 IMRAKTHIEDFEKGNRQAIIIDEIPYQVNKKTLQEKIADLVNEKRIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+ ++VLN L+K TQLQ+TFGMN++ALVNGQPKLLNLKE++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVADVVLNNLFKLTQLQDTFGMNLVALVNGQPKLLNLKELVVYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT+FELRKARE H LEGL +AL NID FIQII+++++P EA +++ W+ V
Sbjct: 361 VITRRTVFELRKAREEGHKLEGLAVALANIDEFIQIIKTSASPDEALERLMSRGWDSSLV 420
Query: 421 SKII----------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNM 470
++ GF K Y + L+N+ +Y LS Q +EIL M L+RLT +
Sbjct: 421 KSLLSRVDEDKALGGF--KAYRP-EGLPEEYGLRNDGLYYLSYDQTREILNMNLRRLTGL 477
Query: 471 EQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNA 530
EQ+KII+ YE + + DL DILS +RI II +EL IKN+Y K+ RRS+I NA
Sbjct: 478 EQEKIISSYEAAMDAITDLLDILSKPERITAIIGEELIAIKNEY--TIKDARRSQIEYNA 535
Query: 531 INPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIAN 590
+ TEDLI DMV+TLSN GYIKSQP+SEY+AQ RGG+GKKA KD D++ QLFIAN
Sbjct: 536 VEFETEDLITPMDMVVTLSNEGYIKSQPLSEYQAQNRGGKGKKATEMKDNDFVQQLFIAN 595
Query: 591 THDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFP 650
THDY+LCFS+ GRL+ LKVW++PQGSRNS+G+PI+N+F L+ EKITV+LP+ + F
Sbjct: 596 THDYVLCFSSLGRLHRLKVWEVPQGSRNSKGRPIVNLFELQENEKITVVLPI----KQFS 651
Query: 651 KNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSG 710
+ ++F++T+ G+VKKT LS +S+ RK +IAV L +D+L+GA LTDG+ DIMLFS++G
Sbjct: 652 DDQFIFLATAKGVVKKTALSQYSSTRKMAVIAVTLDEDDYLVGAELTDGNSDIMLFSNAG 711
Query: 711 KAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKE 770
KAVRF+E+SVRA GRS+RGV+GMRLE+ Q +I+L+VS N+ VLTATENGYGKRT + E
Sbjct: 712 KAVRFDESSVRATGRSSRGVLGMRLEEGQSIISLIVSKNENAYVLTATENGYGKRTPVVE 771
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
YT+H RGTKG+I+I+T++RNGKVVAA LV+ EIMLITT GI++RT+V+ IR++GR+TQ
Sbjct: 772 YTRHGRGTKGMIAIQTSERNGKVVAAVLVDESDEIMLITTDGIVVRTKVAPIRELGRATQ 831
Query: 831 GVILITVENKSKLCGVQR 848
GV LI ++N +KL GVQR
Sbjct: 832 GVKLIRIDNDTKLKGVQR 849
>gi|394989065|ref|ZP_10381899.1| DNA gyrase subunit A [Sulfuricella denitrificans skB26]
gi|393791484|dbj|GAB71538.1| DNA gyrase subunit A [Sulfuricella denitrificans skB26]
Length = 853
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/852 (62%), Positives = 682/852 (80%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFA+E + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRR LFAMHE++N WN
Sbjct: 1 MEQFARETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRALFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYPLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL DLDKET+DF NYDG E EP VLP++IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMARIAHELLADLDKETVDFGPNYDGSEHEPLVLPSKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++D L +L NP+ I +LI+I+PAPDFPTAGIIYG V +GY TG+GRV
Sbjct: 181 NIPPHNLNEIVDACLLLLENPQTDIEELIEIVPAPDFPTAGIIYGTIGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
I+RA+TH E+ ++ R AII+DELPYQVNK +LL KI +LV+EKKLE IS+LRDESDKS
Sbjct: 241 IMRARTHFEDIDKVGGRQAIIVDELPYQVNKANLLIKIGELVREKKLEGISDLRDESDKS 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+V+ELKR E+PE+VLN LYKQTQ+Q+TFGMNM+++++G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRMVLELKRGEVPEVVLNNLYKQTQMQDTFGMNMVSIMDGRPRLLNLKQMLDAFLRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEGL +AL+N+D+ I +I+S TP AK ++ W P
Sbjct: 361 EVVTRRTVFELRKARERGHILEGLAVALSNVDDVIALIKSAPTPSAAKQGLMGQVWRSPL 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + + + + + + Y+LSD+QAQ IL++ LQRLT +EQ KI+++Y
Sbjct: 421 VEEMLARSAADASRPEGL-ALEFGFSEKGYRLSDVQAQAILELRLQRLTGLEQDKIVSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ V++K+ DL DIL+ RI EII EL IK ++G RRSEII++A + S EDLI
Sbjct: 480 KEVMEKIADLLDILAKPARITEIIVLELTAIKAQFGDK----RRSEIIVHAQDLSMEDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
QDMV+TLS+ GYIKSQP+ +Y AQKRGGRGK+A K+ED+I +LFIANTHD ILCFS
Sbjct: 536 TPQDMVVTLSHGGYIKSQPLEDYSAQKRGGRGKQATAMKEEDFIEKLFIANTHDTILCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G++YW+KV+++PQGSR SRGKP INM L+ EKI ILP+ ++F + +++FM+T
Sbjct: 596 NRGQVYWIKVYEVPQGSRGSRGKPFINMLQLEEGEKINAILPV----KEFDEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ GIVKKT LS+FS P K GIIA+NL +D+LIG +TDG +D+MLF+D GKAVRF+E +
Sbjct: 652 ASGIVKKTPLSDFSRPMKRGIIAINLDEDDYLIGVDITDGQHDVMLFTDGGKAVRFDEAA 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRA GR +RGV+G+RL K QKVI+LLV+ N+ QSVLTATENGYGKRT I EYT+H RGT+
Sbjct: 712 VRATGRVSRGVMGVRLGKAQKVISLLVAENETQSVLTATENGYGKRTSIAEYTRHGRGTQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I+T++RNGKVVAATLVN EIMLITTGG+LIRTRVSEIR+MGR+TQGV LI ++
Sbjct: 772 GMIAIQTSERNGKVVAATLVNAEDEIMLITTGGVLIRTRVSEIREMGRATQGVTLINLDK 831
Query: 840 KSKLCGVQRLCK 851
KL G++R+ +
Sbjct: 832 GEKLIGLERVVE 843
>gi|319779311|ref|YP_004130224.1| DNA gyrase subunit A [Taylorella equigenitalis MCE9]
gi|397661549|ref|YP_006502249.1| DNA gyrase subunit A [Taylorella equigenitalis ATCC 35865]
gi|317109335|gb|ADU92081.1| DNA gyrase subunit A [Taylorella equigenitalis MCE9]
gi|394349728|gb|AFN35642.1| DNA gyrase subunit A [Taylorella equigenitalis ATCC 35865]
Length = 895
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/858 (62%), Positives = 682/858 (79%), Gaps = 19/858 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYL Y+MSVIVGRALPDVRDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLSYSMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNSWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD AAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KIS+E+L DL+KET+DF NYDG E EP +LPT+IP LLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLEKISHEMLADLEKETVDFAPNYDGSEFEPKILPTKIPGLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L+ L NP+CSI++LI+ IPAPDFPT GIIYG S V +GY TG+GRV
Sbjct: 181 NIPPHNLSEVIDGCLFCLKNPDCSIDELIEYIPAPDFPTGGIIYGYSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAKTHIE+F + NR AIIIDE+PYQVNKK+L EKI+ LV EK++E IS++RDESDK G
Sbjct: 241 IMRAKTHIEDFEKGNRQAIIIDEIPYQVNKKTLQEKIADLVNEKRIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+ ++VLN L+K TQLQ+TFGMN++ALVNGQPKLLNLKE++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVADVVLNNLFKLTQLQDTFGMNLVALVNGQPKLLNLKELVVYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT+FELRKARE H LEGL +AL NID FIQII+++++P EA +++ W+ V
Sbjct: 361 VITRRTVFELRKAREEGHKLEGLAVALANIDEFIQIIKTSASPDEALERLMSRGWDSSLV 420
Query: 421 SKII----------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNM 470
++ GF K Y + L+N+ +Y LS Q +EIL M L+RLT +
Sbjct: 421 KSLLSRVDEDKALGGF--KAYRP-EGLPEEYGLRNDGLYYLSYDQTREILNMNLRRLTGL 477
Query: 471 EQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNA 530
EQ+KII+ YE + + DL DILS +RI II +EL IKN+Y K+ RRS+I NA
Sbjct: 478 EQEKIISSYEAAMDAITDLLDILSKPERITAIIGEELIAIKNEY--TIKDARRSQIEYNA 535
Query: 531 INPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIAN 590
+ TEDLI DMV+TLSN GYIKSQP+SEY+AQ RGG+GKKA KD D++ QLFIAN
Sbjct: 536 VEFETEDLITPMDMVVTLSNEGYIKSQPLSEYQAQNRGGKGKKATEMKDNDFVQQLFIAN 595
Query: 591 THDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFP 650
THDY+LCFS+ GRL+ LKVW++PQG RNS+G+PI+N+F L+ EKITV+LP+ + F
Sbjct: 596 THDYVLCFSSLGRLHRLKVWEVPQGGRNSKGRPIVNLFELQENEKITVVLPI----KQFS 651
Query: 651 KNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSG 710
+ ++F++T+ G+VKKT LS +S+ RK +IAV L +D+L+GA LTDG+ DIMLFS++G
Sbjct: 652 DDQFIFLATAKGVVKKTALSQYSSTRKMAVIAVTLDEDDYLVGAELTDGNSDIMLFSNAG 711
Query: 711 KAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKE 770
KAVRF+E+SVRA GRS+RGV+GMRLE+ Q +I+L+VS N+ VLTATENGYGKRT + E
Sbjct: 712 KAVRFDESSVRATGRSSRGVLGMRLEEGQSIISLIVSKNENAYVLTATENGYGKRTPVVE 771
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
YT+H RGTKG+I+I+T++RNGKVVAA LV+ EIMLITT GI++RT+V+ IR++GR+TQ
Sbjct: 772 YTRHGRGTKGMIAIQTSERNGKVVAAVLVDESDEIMLITTDGIVVRTKVAPIRELGRATQ 831
Query: 831 GVILITVENKSKLCGVQR 848
GV LI ++N +KL GVQR
Sbjct: 832 GVKLIRIDNDTKLKGVQR 849
>gi|429462686|ref|YP_007184149.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium crithidii
(ex Angomonas deanei ATCC 30255)]
gi|451811559|ref|YP_007448014.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338200|gb|AFZ82623.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium crithidii
(ex Angomonas deanei ATCC 30255)]
gi|451776717|gb|AGF47716.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 866
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/857 (63%), Positives = 678/857 (79%), Gaps = 11/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MN FA E++ I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MNSFAMEMLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYVLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KIS+ELL D+D ET+DF NYDG EKEP VLPT++PNLLING SGIAVGMAT
Sbjct: 121 RYTEIRLAKISHELLADIDSETVDFGLNYDGSEKEPLVLPTKLPNLLINGGSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G L+ L NP+CSI++LI IPAPDFPT GIIYGLS V DGY TG+G+V
Sbjct: 181 NIPPHNLREVISGCLFCLDNPDCSIDELIDFIPAPDFPTGGIIYGLSGVRDGYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH EE+ RE+++AII+DE+PYQVNKK+L E+I++LV K++E IS++RDESDK G
Sbjct: 241 LMRAKTHFEEYGREHKSAIIVDEIPYQVNKKTLQERIAELVNSKRIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E PEI+LN LYK TQLQ+T GMN++ALV+GQPKLLNLK+I+ YF+ HR+E
Sbjct: 301 MRLVIELKRGESPEIILNNLYKNTQLQDTLGMNLVALVHGQPKLLNLKQIISYFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L KA+ AHILEGL +AL NID FI II++ ++P A+ ++ W V
Sbjct: 361 VVTRRTVFRLNKAKNRAHILEGLAVALANIDEFILIIKTAASPLIARQNLMNKDWPSDLV 420
Query: 421 SKII------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
+I G +K+NY +N ++ N +Y+LS+ QAQEIL M LQRLT +EQ K
Sbjct: 421 GSMISKFETNGVSKENYKPAVVGDNFGIVEGN-LYRLSEWQAQEILNMRLQRLTGLEQDK 479
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
+ ++Y+ + + DL DILSN +R+ +II +EL +IK+++ S K+ R+S I N
Sbjct: 480 VFDEYKETMSIISDLLDILSNHERVTDIIKEELILIKDEFSSEIKDPRKSYIEANTTELV 539
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS GY+KSQP+SEY AQKRGG GK+A KD+DWI LFIAN+H+Y
Sbjct: 540 TEDLIVPNDMVVTLSYNGYLKSQPLSEYHAQKRGGHGKQATSIKDDDWIEHLFIANSHEY 599
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+L FS+ GR+YW+KVW+ PQGSR S+GKP+IN+F L + EKITVILP+ +DF ++ Y
Sbjct: 600 LLFFSDLGRVYWIKVWETPQGSRGSKGKPVINLFPLSSNEKITVILPV----KDFSEDLY 655
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+T+ G VKKT LS+FSNPRK+GIIAV L++ D+LIGA LT+G YD+MLFSDSGKAVR
Sbjct: 656 VFMATAKGTVKKTPLSDFSNPRKNGIIAVGLNDGDYLIGAELTNGDYDVMLFSDSGKAVR 715
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
FNE VR+MGRSARGV GM L K Q+V++LLVSNN+ +SVL ATENG+GKRT IK+YT H
Sbjct: 716 FNEKDVRSMGRSARGVRGMILGKNQQVVSLLVSNNEDKSVLIATENGFGKRTSIKQYTVH 775
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
NR TKG+I+I+ +KRNGKV+ A LVN EIMLITT G+L+RTR++EIR MGR TQGV L
Sbjct: 776 NRSTKGMIAIQNSKRNGKVIGAVLVNPNDEIMLITTAGVLVRTRIAEIRNMGRITQGVTL 835
Query: 835 ITVENKSKLCGVQRLCK 851
I + S L V+++ +
Sbjct: 836 INIAKGSYLSKVRKVVE 852
>gi|348589939|ref|YP_004874401.1| DNA gyrase subunit A [Taylorella asinigenitalis MCE3]
gi|347973843|gb|AEP36378.1| DNA gyrase subunit A [Taylorella asinigenitalis MCE3]
Length = 894
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/861 (61%), Positives = 683/861 (79%), Gaps = 19/861 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + + LEEEM +SYL Y+MSVIVGRALPDVRDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MDSFAKETLPVSLEEEMRRSYLSYSMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNSWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD AAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++E+L DL+KET+DF NYDG E EP +LPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLEKIAHEMLSDLEKETVDFGPNYDGSEFEPKILPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G LY L NP+CSI++LI+ IPAPDFPT GIIYG S V +GY TG+GRV
Sbjct: 181 NIPPHNLSEVIEGCLYCLKNPDCSIDELIEYIPAPDFPTGGIIYGYSGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTHIE F + NR AI++DE+PYQVNKK+L EKI++LV KK+E IS++RDESDK G
Sbjct: 241 VMRAKTHIENFEKGNRQAIVVDEIPYQVNKKTLQEKIAELVNGKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+ +++LN L+K TQLQ+TFGMN++ALVNGQPKLLNLKE++ YF+ HR+E
Sbjct: 301 MRLVIELKRGEVADVILNNLFKLTQLQDTFGMNLVALVNGQPKLLNLKELVVYFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT++ELRKARE H LEGL +AL NID FIQ I+S+++P EA +++ W+ V
Sbjct: 361 VITRRTVYELRKAREEGHKLEGLAVALANIDEFIQTIKSSASPDEALERLMSKGWDSSLV 420
Query: 421 SKII----------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNM 470
++ GF K Y + L+ + +Y LS Q +EIL M L+RLT +
Sbjct: 421 KSLLSRVDEDQTLGGF--KAYRP-EGLPEEYGLREDGLYYLSYEQTREILNMNLRRLTGL 477
Query: 471 EQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNA 530
EQ+KII+ YE ++ + DL DIL+ +RI II +EL IKN+Y K+ RRS+I A
Sbjct: 478 EQEKIISSYEAAMEAITDLLDILAKPERITTIIGEELIAIKNEY--TLKDTRRSQIEYQA 535
Query: 531 INPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIAN 590
TEDLI DMV+TLS GYIKSQP+SEY+AQ RGGRGKKA KD+D+I QLFIAN
Sbjct: 536 AEFETEDLITPMDMVVTLSKEGYIKSQPLSEYQAQNRGGRGKKATEMKDDDYIQQLFIAN 595
Query: 591 THDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFP 650
THDY+LCFS+ GRL+ LKVW++PQG+R S+GKPI+N+F L+ E+ITV+LP+ + F
Sbjct: 596 THDYVLCFSSLGRLHRLKVWEVPQGTRTSKGKPIVNLFDLQENERITVVLPI----KQFS 651
Query: 651 KNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSG 710
+ ++F++T+ GIVKKT LS +S+ RK +IAV L ++D+L+GA LTDG+ DIMLFSD+G
Sbjct: 652 DDQFIFLATAKGIVKKTALSQYSSTRKMAVIAVTLDDDDYLVGAELTDGNSDIMLFSDAG 711
Query: 711 KAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKE 770
KAVRF+E+SVRA GRS+RGV+GMRLE+ QK+I+L+VS +++ SVLTATENGYGKRT + +
Sbjct: 712 KAVRFDESSVRATGRSSRGVLGMRLEEGQKIISLIVSKDEQASVLTATENGYGKRTAVTD 771
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
YT+H RGTKG+I+I+T+ RNGKVVAA LV+ EIMLITT GI++RT+V +IR+MGR+TQ
Sbjct: 772 YTRHGRGTKGMIAIQTSDRNGKVVAAVLVHPEDEIMLITTDGIVVRTKVEQIREMGRATQ 831
Query: 831 GVILITVENKSKLCGVQRLCK 851
GV LI V+ +KL GVQR+ +
Sbjct: 832 GVTLIRVDQGTKLSGVQRVVE 852
>gi|91776041|ref|YP_545797.1| DNA gyrase subunit A [Methylobacillus flagellatus KT]
gi|91710028|gb|ABE49956.1| DNA gyrase subunit A [Methylobacillus flagellatus KT]
Length = 864
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/853 (61%), Positives = 686/853 (80%), Gaps = 13/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 13 MDQFAKETLPISLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 72
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 73 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 132
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL D+DKET+DF NYDG E EP ++P RIPNLLINGSSGIAVGMAT
Sbjct: 133 RYTEIRMARIAHELLADIDKETVDFGPNYDGSEHEPLIMPARIPNLLINGSSGIAVGMAT 192
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI L +L NPE ++++LI+IIPAPDFPTAGIIYG V +GY TG+GRV
Sbjct: 193 NIPPHNLNEVIAACLALLKNPETTVDELIEIIPAPDFPTAGIIYGTVGVREGYRTGRGRV 252
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++R +TH+E+ + NR A+I+DELPYQVNKK+ +EKI++LV EKK+E IS+LRDESDKSG
Sbjct: 253 VMRGRTHVEDLEKGNRQALIVDELPYQVNKKTFVEKIAELVNEKKIEGISDLRDESDKSG 312
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+AL++GQP+LLNLK++L F+ HR+E
Sbjct: 313 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALLDGQPRLLNLKQMLEAFLRHRRE 372
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL N+D I +I++ TP EAK +++ TW P V
Sbjct: 373 VVTRRTVYELRKARERGHVLEGLAVALANVDEMIALIKAAPTPPEAKRELMARTWKSPVV 432
Query: 421 SKIIGFNKKNYNTISKINNISK--LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+++ K+ S+ ++ D YKLSD+QAQEIL+M LQRLT +EQ KI+N+
Sbjct: 433 EEML---KRAAMEASRPEGLAVNFGLTPDGYKLSDVQAQEILQMRLQRLTGLEQDKIVNE 489
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + DL DIL+ S+R+ +II +EL I N++G RRSEI+ NA + S EDL
Sbjct: 490 YKEIMDVIADLLDILARSERVTQIIVEELTAILNQFGDK----RRSEIVHNAQDLSLEDL 545
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I QD+V+TLS+ GY+KSQP+ EYRAQ+RGGRGK+A TK++D+I+++F+ANTHDYILCF
Sbjct: 546 ITPQDVVVTLSHTGYVKSQPLEEYRAQRRGGRGKQAAATKEDDFIDKMFVANTHDYILCF 605
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YWLKV+++PQGSR SRGKPI+N+F L++ EKI ILP+ ++F +N++VFM+
Sbjct: 606 SSRGRVYWLKVYEVPQGSRVSRGKPIVNLFPLEDGEKINAILPV----KEFDENHFVFMA 661
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L+ FSNPR+SGIIA+NL + D+LIGA +T+G DI+L S+ GKAV F+E
Sbjct: 662 TAKGTVKKTALTEFSNPRRSGIIALNLDDGDYLIGAEVTNGVNDIVLVSNGGKAVWFDEE 721
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+ARGV GM+L+ KQ+VI+LL+++N KQ+VL ATENGYGKRT++ ++ RGT
Sbjct: 722 DVRPMGRAARGVRGMKLQGKQQVISLLIADNDKQTVLVATENGYGKRTVLADFRHSGRGT 781
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+ +I T++RNG VV A LV EIMLITTGG+LIRTRV EIR++GR+TQGV LI +
Sbjct: 782 QGVKAIATSERNGIVVGARLVGDDDEIMLITTGGVLIRTRVKEIRELGRATQGVTLINLG 841
Query: 839 NKSKLCGVQRLCK 851
KL G++++ +
Sbjct: 842 EGEKLSGLEKVVE 854
>gi|334131893|ref|ZP_08505655.1| DNA gyrase subunit A [Methyloversatilis universalis FAM5]
gi|333443366|gb|EGK71331.1| DNA gyrase subunit A [Methyloversatilis universalis FAM5]
Length = 872
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/854 (61%), Positives = 681/854 (79%), Gaps = 21/854 (2%)
Query: 4 FAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPF 63
FAKE + I LE+EM SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +RP+
Sbjct: 5 FAKETLPISLEDEMRHSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEANITHSRPY 64
Query: 64 VKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYT 123
VKCARVVG+ MGKYHPHGD +IYD LVRMAQ FSLR TL+DGQGNFGS+DGD+AAAMRYT
Sbjct: 65 VKCARVVGDVMGKYHPHGDSAIYDTLVRMAQDFSLRYTLIDGQGNFGSVDGDNAAAMRYT 124
Query: 124 ECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIP 183
ECRL+KI+ ELL D+DKET+DF NYDGKE+EP VLP+RIPNLLINGS+GIAVGMATNIP
Sbjct: 125 ECRLDKIAAELLADIDKETVDFGPNYDGKEQEPLVLPSRIPNLLINGSAGIAVGMATNIP 184
Query: 184 PHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIR 243
PHNL EV+D +L P+ I LI I+ APDFPT+G+IYGLS V +GY TG+GRV++R
Sbjct: 185 PHNLAEVLDACQLLLAEPDTPIETLIDIVQAPDFPTSGLIYGLSGVREGYLTGRGRVVMR 244
Query: 244 AKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRI 303
A+TH E+ +R NR AII+DELPYQVNKK+LLE+I++LV +KK+E IS++RDESDKSGMR+
Sbjct: 245 ARTHFEDIDRGNRQAIIVDELPYQVNKKTLLERIAELVNDKKVEGISDIRDESDKSGMRV 304
Query: 304 VIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIK 363
VIELKR E+PE++LN LYK TQLQ+TFGMNM+ALV+G+P+LLNL+++L F+ HR+EVI
Sbjct: 305 VIELKRGEVPEVILNNLYKLTQLQDTFGMNMVALVDGRPRLLNLRDMLGCFLSHRREVIT 364
Query: 364 RRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKI 423
RRT++ELRKARE H+LEGL +AL+NID I +I+++ + EA+ ++ W V ++
Sbjct: 365 RRTVYELRKARERGHVLEGLAVALSNIDEIIALIKASPSRSEAQTALMARVWTSTLVEQM 424
Query: 424 I------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ GF + + + D Y++SD+QA+ IL M L RLT +EQ+KI
Sbjct: 425 LTRAGADGFRPDGLD--PAFGSFA-----DGYRMSDVQAKAILDMQLARLTGLEQEKITA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y VI+++IDL DIL+ +RI +II+DE+ I+ ++G + R+SEII++ + ED
Sbjct: 478 EYREVIEQIIDLLDILARPERINQIISDEMRQIREQFG----DARKSEIIVHTQDLGIED 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA QDMV+TLS+ GY K QP+++YR+QKRGGRGK+A KD+D+++QLF+ANTHDYILC
Sbjct: 534 LIAQQDMVVTLSHGGYFKRQPLADYRSQKRGGRGKQAAAVKDDDFVDQLFVANTHDYILC 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FSN GR+YWLKV+++P+GSRNSRGKPI+N+F L + EKIT +LP+ ++F +N+Y+FM
Sbjct: 594 FSNRGRVYWLKVYEVPEGSRNSRGKPIVNLFPLLDGEKITAVLPV----KEFDENHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L++FSNPRK+GIIAV+L D LIG A+TDGS DIMLFSD+GKAVRF E
Sbjct: 650 ATGRGTVKKTPLTDFSNPRKAGIIAVDLDEGDALIGVAITDGSDDIMLFSDAGKAVRFAE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VR MGR+ARGV GM LE Q VI +LVS N + SVLTATENG+GKRT + EY KH RG
Sbjct: 710 ADVRPMGRTARGVRGMMLEDGQSVICMLVSKNDELSVLTATENGFGKRTRVTEYPKHGRG 769
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
TKG+I+I+T++RNG VV A LV EIMLI+TGG+LIRTRV++IR+MGRSTQGV LI +
Sbjct: 770 TKGVIAIQTSERNGGVVGAVLVETTDEIMLISTGGVLIRTRVADIREMGRSTQGVTLINL 829
Query: 838 ENKSKLCGVQRLCK 851
++ ++L G++++ +
Sbjct: 830 DDGTRLAGLEKVIE 843
>gi|82703307|ref|YP_412873.1| DNA gyrase subunit A [Nitrosospira multiformis ATCC 25196]
gi|82411372|gb|ABB75481.1| DNA gyrase subunit A [Nitrosospira multiformis ATCC 25196]
Length = 893
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/855 (61%), Positives = 679/855 (79%), Gaps = 14/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 33 MDQFAKETLQISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 92
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 93 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNPAAM 152
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++E+L DLDKET+DF NYDG EKEP +LPT+IPNLLINGSSGIAVGMAT
Sbjct: 153 RYTEIRMSRIAHEMLADLDKETVDFGPNYDGTEKEPLILPTKIPNLLINGSSGIAVGMAT 212
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV D L +L NPE +I DLI++IP PDFPTA +IYG++ V +GY TG+GRV
Sbjct: 213 NIPPHNLNEVTDACLALLKNPEIAIEDLIELIPGPDFPTAALIYGVTGVKEGYRTGRGRV 272
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
I+RA+TH E+ + R +I+IDELPYQVNK +LL +I +LV++KK+E IS+LRDESDKS
Sbjct: 273 IMRARTHFEDMEKGGGRQSIVIDELPYQVNKANLLIRIGELVRDKKIEGISDLRDESDKS 332
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+RNE+PE+VLN LYK+TQ+Q+TFGMNM+AL++GQP+LLNLK++L F+ HR+
Sbjct: 333 GMRVVIELRRNEVPEVVLNNLYKETQMQDTFGMNMVALLDGQPRLLNLKQMLEAFLRHRR 392
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RR++FEL+KARE H+LEGL +AL+N+D I +I++ TP AK ++ W
Sbjct: 393 EVVTRRSVFELKKARERGHVLEGLAVALSNVDEVIALIKAAQTPAAAKEALMSRVWRSRL 452
Query: 420 VSKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
V +++ + K + +D Y LSD QAQ IL++ LQRLT +EQ KI+
Sbjct: 453 VEQMLARAAVDAKQFRPEGLAPEYGLF--DDGYHLSDGQAQAILELRLQRLTGLEQDKIV 510
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
++Y +V++++ DL DIL+ +RI IIT+EL +K ++G RRSEI++N + S E
Sbjct: 511 SEYRDVMERIADLLDILARPERITAIITEELVAMKQQFGDK----RRSEIVINTQDLSME 566
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLIAS+D+V+TLS+ GYIKSQP+ +YRAQKRGGRGK+A TKD+D+I+ LFIANTHDYIL
Sbjct: 567 DLIASEDVVVTLSHNGYIKSQPLDDYRAQKRGGRGKQATGTKDDDFIDNLFIANTHDYIL 626
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CFS+ GR+YW+KV+ +PQG R SRG+PI+N+ L+ EKI +LP+ + F N YVF
Sbjct: 627 CFSSRGRVYWIKVYSVPQGGRASRGRPIVNLMQLEYGEKINAVLPI----KTFDDNRYVF 682
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
M+TSLG VKKT LS FS PR SGIIAV L +DFLIG ALT+G +D+MLFSD GKAVRF+
Sbjct: 683 MATSLGTVKKTPLSEFSRPRASGIIAVGLDEDDFLIGVALTEGKHDVMLFSDGGKAVRFD 742
Query: 717 ENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNR 776
EN VR MGR ARGV GM L K QKVI+LLV+ +++Q+VLTATENGYGKRT I EYT+H R
Sbjct: 743 ENDVRPMGRGARGVRGMTLGKGQKVISLLVAESEEQAVLTATENGYGKRTPISEYTRHGR 802
Query: 777 GTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILIT 836
G++G+I+IKT +RNGKVV A LV EIMLITTGG+LIRTRV E+R+M R+TQGVILI
Sbjct: 803 GSQGMIAIKTTQRNGKVVGARLVREDDEIMLITTGGVLIRTRVKEVREMSRATQGVILIN 862
Query: 837 VENKSKLCGVQRLCK 851
++ KL G++R+ +
Sbjct: 863 LDEGEKLAGLERVVE 877
>gi|253999244|ref|YP_003051307.1| DNA gyrase subunit A [Methylovorus glucosetrophus SIP3-4]
gi|313201333|ref|YP_004039991.1| DNA gyrase subunit A [Methylovorus sp. MP688]
gi|253985923|gb|ACT50780.1| DNA gyrase, A subunit [Methylovorus glucosetrophus SIP3-4]
gi|312440649|gb|ADQ84755.1| DNA gyrase, A subunit [Methylovorus sp. MP688]
Length = 848
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/854 (61%), Positives = 687/854 (80%), Gaps = 15/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MDQFAKETLPISLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL D+DKET+DF NYDG E EP ++P RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELLADIDKETVDFGPNYDGSEHEPLIMPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L +L NPE ++++LI IIPAPDFPTAGIIYG V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLVLLKNPETTVDELIDIIPAPDFPTAGIIYGTLGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++R +TH+E+ + NR A+IIDELPYQVNKK+L+EKI++LV +KK+E IS+LRDESDKSG
Sbjct: 241 VMRGRTHVEDMEKGNRQALIIDELPYQVNKKTLIEKIAELVNDKKIEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN LYKQTQLQ+TFGMNM+AL++GQP+LLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVILNNLYKQTQLQDTFGMNMVALLDGQPRLLNLKQMLEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT++ELRKARE H+LEGL +AL N+D I +I++ TP EAK ++ TW P V
Sbjct: 361 VITRRTVYELRKARERGHVLEGLAVALANVDEMIALIKAAPTPPEAKKSLMARTWVSPVV 420
Query: 421 SKIIGFNKKNYNTISKINNIS---KLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ K+ S+ + +S + N Y+LSD+QAQEIL+M LQRLT +EQ KI+N
Sbjct: 421 EEML---KRAAMEASRPDGLSVDFGMTPNG-YRLSDVQAQEILQMRLQRLTGLEQDKIVN 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ V+ + DL DIL+ +R+ ++I DEL I+ ++G RRSEI+ NA + S ED
Sbjct: 477 EYKEVMDVIADLLDILAKPERVTQMIVDELAAIRQQFGDE----RRSEIVHNAQDLSLED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI QD+V+TLS+ GY+KSQP+ EYRAQ+RGGRGK+A TK++D+I+++F+ANTHDYILC
Sbjct: 533 LITPQDVVVTLSHTGYVKSQPLDEYRAQRRGGRGKQATATKEDDFIDKMFVANTHDYILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GR+YWLKV+++PQGSR SRGKPI+N+F L++ EKI ILP+ ++F +N+++FM
Sbjct: 593 FSSRGRVYWLKVYEVPQGSRISRGKPIVNLFPLEDGEKINAILPV----KEFDENHFIFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L FSNPR++GIIA+NL + D+LIGA +T+G+ DI+L S+ GKAV F+E
Sbjct: 649 ATAQGTVKKTALVEFSNPRRAGIIAINLDDGDYLIGAEVTNGANDIVLVSNGGKAVWFDE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VRAMGR+ RGV GM+L KQ+VI+LL++ + KQ+VL ATENGYGKRT++ ++ RG
Sbjct: 709 EDVRAMGRNTRGVRGMKLMAKQRVISLLIAEDDKQTVLVATENGYGKRTVLSDFRHSGRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ +I T++RNG VVAA LV+ EIMLITTGG+LIRTRV EIR++GR+TQGV LI +
Sbjct: 769 TQGVKAIATSERNGSVVAARLVSDEDEIMLITTGGVLIRTRVKEIRELGRATQGVTLINL 828
Query: 838 ENKSKLCGVQRLCK 851
KL G++++ +
Sbjct: 829 GENEKLSGLEKVVE 842
>gi|253996361|ref|YP_003048425.1| DNA gyrase subunit A [Methylotenera mobilis JLW8]
gi|253983040|gb|ACT47898.1| DNA gyrase, A subunit [Methylotenera mobilis JLW8]
Length = 862
Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/854 (60%), Positives = 685/854 (80%), Gaps = 15/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE++N +N
Sbjct: 1 MDQFAKETLPISLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL D+DKET+DF NYDG E EP ++P RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELLADIDKETVDFGPNYDGSEHEPLIMPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D +L NPE ++ +LI+++PAPDFPTAGIIYG V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVLDACFSLLKNPETTVEELIELVPAPDFPTAGIIYGTVGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++R +TH E+ ++ R +IIIDELPYQVNKK+L+EKI++LV EKK+E IS+LRDESDKSG
Sbjct: 241 VMRGRTHFEDMDKGGRQSIIIDELPYQVNKKTLIEKIAELVNEKKIEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR EIP++VLN LYKQTQLQ+TFGMNM+AL++GQP+LLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEIPDVVLNNLYKQTQLQDTFGMNMVALLDGQPRLLNLKQMLEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL N+D I II++ TP EAK ++ +W P V
Sbjct: 361 VVTRRTVFELRKARERGHVLEGLAVALANVDEMIAIIKAAPTPPEAKKDLMAKSWQSPVV 420
Query: 421 SKIIGFNKKNYNTISKINNIS---KLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ K+ ++ ++ L N YKLSD+QAQEIL+M LQRLT +EQ KI+N
Sbjct: 421 EEML---KRAAMEAARPEGLAVNFGLTPNG-YKLSDVQAQEILQMRLQRLTGLEQDKIVN 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ V+ + DL DIL+ + R+ IITDEL I+ ++G RRSEI+ NA + S ED
Sbjct: 477 EYKEVMDVIADLLDILATAARVTAIITDELTEIRRQFGDK----RRSEIVENAQDLSLED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA QD+V+TLS+ GYIKSQP+ EYRAQKRGGRGK+A TK++D+I+++F+ANTHDYILC
Sbjct: 533 LIAPQDVVVTLSHTGYIKSQPLDEYRAQKRGGRGKQAAATKEDDFIDKMFVANTHDYILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FSN GR+YWLKV+++PQGSR SRGKPI+N+F L+ EKI IL + + F +N+++FM
Sbjct: 593 FSNRGRVYWLKVYEVPQGSRTSRGKPIVNLFPLEENEKINAILSV----KSFDENHFIFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+TSLG VKKT L+ F+NPR+SGIIA+NL D+LIGA +T+GS D++L S+ GKAV F+E
Sbjct: 649 ATSLGTVKKTALTEFANPRRSGIIAINLDEGDYLIGAEITNGSNDVVLVSNGGKAVWFDE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR MGR+ RGV GM+L + Q+V++LL+++N +Q+V+ ATENGYGKRT++ ++ + RG
Sbjct: 709 DEVRQMGRATRGVRGMKLAEDQQVLSLLIASNDQQTVMVATENGYGKRTVLADFRRSGRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ +I ++RNG VVAA LV+ EIMLITTGG+LIRTRVSEIR++GR+TQGV LI +
Sbjct: 769 TQGVKAIAVSERNGLVVAAKLVSDEDEIMLITTGGVLIRTRVSEIRELGRATQGVTLINL 828
Query: 838 ENKSKLCGVQRLCK 851
KL G++++ +
Sbjct: 829 GEGEKLSGIEKIVE 842
>gi|451812284|ref|YP_007448738.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium galatii
TCC219]
gi|451778186|gb|AGF49134.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium galatii
TCC219]
Length = 854
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/858 (62%), Positives = 689/858 (80%), Gaps = 9/858 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MN FA E++ + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MNSFAVEMLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YDA+VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDAIVRMAQDFSMRYVLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KIS+ELL D+D ET++F NYD E+EP +LP+RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKISHELLADIDNETVNFGPNYDNSEQEPLILPSRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L+ L NP+CSI ++I +IPAPDFPT GII+GLS V +GY TG+GRV
Sbjct: 181 NIPPHNLREVINGCLFCLKNPDCSIEEIIDLIPAPDFPTGGIIHGLSGVINGYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IIRAK H EE ++EN++ I++DE+PYQVNKKSL E+I++LV KK+E I ++RDESDK G
Sbjct: 241 IIRAKVHFEE-SKENKSRIVVDEIPYQVNKKSLQERIAELVNSKKIEGIVDIRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VI+L+R E PE+VLN LYK TQLQ++ GMN++ALV+GQPKLLNLK+I+ YF+ HR+E
Sbjct: 300 MRLVIDLRRGESPEVVLNNLYKNTQLQDSIGMNLVALVDGQPKLLNLKQIITYFLQHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L KAR HILEGL +AL NID FI II+S +TP A+ ++ +W+ V
Sbjct: 360 VVTRRTVFRLNKARARGHILEGLAVALENIDEFILIIKSAATPSIARQNLMNRSWSSSLV 419
Query: 421 SKI---IGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++I + + ++ +++IS L NN +Y LS++QAQEIL M LQRLT +EQ KI++
Sbjct: 420 NEILVRVDVSLRHIYRPDGVSSISGLNNNGLYYLSELQAQEILNMRLQRLTGLEQGKILD 479
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y V+ + DL DIL+ R+ +II +EL I++ ++ S K + R S+I ++ +TED
Sbjct: 480 EYREVMDTISDLLDILAKPDRVTKIIHNELEIVREEFSSLKDDNRNSQIEIDVTELNTED 539
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI DMV+TL++ GY+KSQP+SEYR+QKRGG GK+A + KD DWI+ LFIANTHDY+L
Sbjct: 540 LITPADMVVTLTHNGYLKSQPLSEYRSQKRGGHGKQATIIKDNDWIDYLFIANTHDYLLF 599
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GR+YW+KVW+ PQG+R SRGKP++NMF L + EKITV+LP+ ++F + Y+FM
Sbjct: 600 FSDLGRVYWMKVWETPQGTRGSRGKPVVNMFPLDSNEKITVVLPV----KEFTDDLYIFM 655
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ GIVKKT LS+FSNPR+SGIIAV L D+LIGA LTDG +D+MLFSDSGKAVRF E
Sbjct: 656 ATARGIVKKTPLSDFSNPRRSGIIAVVLGEGDYLIGAELTDGKHDVMLFSDSGKAVRFYE 715
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
N VR+MGR++RGV GM ++ K +VI+LLV+N++ +SVL ATENG+GKRT IKEYT+HNRG
Sbjct: 716 NDVRSMGRNSRGVRGMSMDSKHRVISLLVANDENKSVLVATENGFGKRTSIKEYTRHNRG 775
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
TKG+ISI+T+ RNG+VV A LV EIMLIT GG+L+RTRVSEIR+MGR TQGV L+ V
Sbjct: 776 TKGMISIQTSARNGRVVGAVLVKPDDEIMLITNGGVLVRTRVSEIRQMGRVTQGVKLMNV 835
Query: 838 ENKSKLCGVQRLCKITMI 855
+ S L GV+R+ + +I
Sbjct: 836 DG-SLLSGVRRVVESDVI 852
>gi|296136328|ref|YP_003643570.1| DNA gyrase subunit A [Thiomonas intermedia K12]
gi|295796450|gb|ADG31240.1| DNA gyrase, A subunit [Thiomonas intermedia K12]
Length = 868
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/858 (60%), Positives = 683/858 (79%), Gaps = 29/858 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + I LE EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MSVFAKETLPISLETEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNAWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG E+EP +LP R+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLADIDKETVDFGPNYDGSEQEPLLLPARLPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NP +I +L++ +PAPDFPTAGIIYG S V D Y TG+GRV
Sbjct: 181 NIPPHNLGEVLDACLHLLRNPGATIEELMERVPAPDFPTAGIIYGTSGVRDAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ H E+ + R AII+DELPYQVNK++LLE+I++LV+EKK+E IS+++DESDKSG
Sbjct: 241 VMRARCHFEDLEKGQRQAIIVDELPYQVNKRTLLERIAELVQEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALV+GQP+LLNL++++ F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGVNMVALVDGQPRLLNLQQMIAAFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
+I RRT+F+LRKARE H+LEGL +AL N+D I++I++ TP AK +++ W P
Sbjct: 361 IITRRTVFDLRKARERGHVLEGLAVALANVDRMIELIKAAPTPPVAKERLLAQAWE-PGE 419
Query: 421 SKIIGFNKKNYNTISKI-NNISKLQNNDM----------YKLSDIQAQEILKMPLQRLTN 469
++ + +S++ +I++ Q +D+ Y LS+ QAQEIL+M LQRLT
Sbjct: 420 ARAM---------LSRVEGDITQFQPDDLDARYGLKPDGYYLSETQAQEILQMRLQRLTG 470
Query: 470 MEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILN 529
+EQ KI+++Y++V++++ DL DIL+ +R+ EIIT E++ ++ ++G + RRS I +N
Sbjct: 471 LEQDKIVSEYKDVMEQIADLLDILAKPERMTEIITTEMSALRAEFG----DARRSHIEVN 526
Query: 530 AINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIA 589
A + EDLI QD+V+T+S+ GY+KSQP++EYRAQ+RGGRGK A TK++DW+ QLF+A
Sbjct: 527 AYDIDVEDLITPQDLVVTISHSGYVKSQPLAEYRAQRRGGRGKLATGTKEDDWVEQLFVA 586
Query: 590 NTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDF 649
NTHD +LCFSN GR+YW+KV++ P G R SRGKP++N+F L+ EKIT +LP+ + F
Sbjct: 587 NTHDMLLCFSNRGRVYWMKVYESPMGGRGSRGKPLVNLFPLQAGEKITTVLPV----KAF 642
Query: 650 PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDS 709
+ +YVFM+T+ G VKKT L+ F+N R +GIIAV L ++D+LIGAA+TDG +D+MLFSD+
Sbjct: 643 DEQHYVFMATARGTVKKTPLTAFANRRTAGIIAVGLDDDDYLIGAAITDGQHDVMLFSDA 702
Query: 710 GKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIK 769
GKAVRF+E VR MGR ARGV GM+LE Q VIALLV+ ++ QSVLTATENG+GKRT I
Sbjct: 703 GKAVRFDEADVRPMGREARGVRGMQLEADQSVIALLVAEDETQSVLTATENGFGKRTSIT 762
Query: 770 EYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRST 829
EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLIT G+L+RTRV EIR+MGR+T
Sbjct: 763 EYTRHGRGTKGMIAIQTSERNGKVVAACLVRTSDEIMLITDTGVLVRTRVEEIREMGRAT 822
Query: 830 QGVILITVENKSKLCGVQ 847
QGV LI ++ K+ L VQ
Sbjct: 823 QGVTLIALDAKAHLIQVQ 840
>gi|118594749|ref|ZP_01552096.1| DNA gyrase subunit A [Methylophilales bacterium HTCC2181]
gi|118440527|gb|EAV47154.1| DNA gyrase subunit A [Methylophilales bacterium HTCC2181]
Length = 855
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/853 (61%), Positives = 690/853 (80%), Gaps = 13/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE I + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE++N +N
Sbjct: 1 MSQFAKETIPVSLEDEMKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNNFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KIS+E+L D+DKET+DF NYDG E EP ++PTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKISHEMLADIDKETVDFGPNYDGSEHEPLIMPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
N PPHNLTEVI+G+L +L PE SI++L++ IP PDFPT+GII+G+S V DGY TG+GRV
Sbjct: 181 NFPPHNLTEVINGLLALLQKPETSIDELMEFIPGPDFPTSGIIHGISGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++R KTH+E R NR AII+DELPYQVNKK+ +EKI++LV +KK+E IS+LRDESDK+G
Sbjct: 241 VMRGKTHVESLERGNREAIIVDELPYQVNKKTFIEKIAELVGDKKIEGISDLRDESDKAG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELK+ EIPE++LN LYKQTQLQ+ FGMNM+AL++GQP+LLNL+EIL F+ HR+E
Sbjct: 301 MRVVIELKKGEIPEVILNNLYKQTQLQDNFGMNMVALIDGQPRLLNLREILDAFLKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT++EL+KARE HILEGL +AL N+D I+II+S TP +AK +++E +W V
Sbjct: 361 VITRRTVYELKKARERGHILEGLAVALANVDEMIKIIKSAPTPPDAKKELMERSWASDVV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S ++ KK+ +SK + +S L D Y+LSD QAQEIL++ LQRLT +EQ+KI+ +
Sbjct: 421 SSML---KKSSQDLSKPDGLSVLYGLKEDGYRLSDTQAQEILQLRLQRLTGLEQEKIVTE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y ++ +IDL DIL+ S+R+ II++EL I+++YG RRSEI+ +A + S EDL
Sbjct: 478 YHAIMVTIIDLLDILNKSERVTSIISEELTEIRSQYGDD----RRSEIVTDAYDLSIEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA QDMV+TLSN GYIK+Q + +YRAQKRGGRGK+AM TK++D+I Q+F+AN+HD ILCF
Sbjct: 534 IAPQDMVVTLSNSGYIKAQVLDDYRAQKRGGRGKQAMGTKEDDFIEQMFVANSHDNILCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ G++YWLKV+++PQGSR SRGKPI+N+F L EKI IL + +DF + Y+FM+
Sbjct: 594 SSRGQVYWLKVYEVPQGSRISRGKPIVNLFPLMPGEKINAILAV----KDFVDDEYIFMA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT LS+FSNPRKSGIIA+ L+N D+LIGA +T+G DI+L S GKAV F+E+
Sbjct: 650 TAKGTVKKTPLSDFSNPRKSGIIAIKLANGDYLIGAGVTNGEQDIILISSGGKAVWFDEH 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR+MGR+A GV GM+L ++V++LL++++ ++SVL ATENGYGKRT++ E+ K RGT
Sbjct: 710 DVRSMGRNAAGVRGMKLPDTEQVLSLLIASSNEESVLVATENGYGKRTVLSEFRKSGRGT 769
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+ +I+ + RNG VVAA LV + EIMLITTGG+LIRTRVSEIR++GR+TQGV LI +
Sbjct: 770 QGVKAIQVSDRNGIVVAAKLVGDHDEIMLITTGGVLIRTRVSEIRELGRATQGVTLINLS 829
Query: 839 NKSKLCGVQRLCK 851
+ KL G++++ +
Sbjct: 830 DGEKLSGIEKIVE 842
>gi|410694139|ref|YP_003624761.1| DNA gyrase subunit A [Thiomonas sp. 3As]
gi|294340564|emb|CAZ88949.1| DNA gyrase subunit A [Thiomonas sp. 3As]
Length = 868
Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/858 (60%), Positives = 680/858 (79%), Gaps = 29/858 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE + I LE EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MSVFAKETLPISLETEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNAWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++E+L D+DKET+DF NYDG E+EP +LP R+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHEMLADIDKETVDFGPNYDGSEQEPLLLPARLPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L++L NP +I +L++ +PAPDFPTAGIIYG S V D Y TG+GRV
Sbjct: 181 NIPPHNLGEVLDACLHLLRNPGATIEELMERVPAPDFPTAGIIYGTSGVRDAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ H E+ + R AII+DELPYQVNK++LLE+I++LV+EKK+E IS+++DESDKSG
Sbjct: 241 VMRARCHFEDLEKGQRQAIIVDELPYQVNKRTLLERIAELVQEKKIEGISHIQDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALV+GQP+LLNL++++ F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGVNMVALVDGQPRLLNLQQMIAAFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
+I RRT+F+LRKARE H+LEGL +AL N+D I++I++ TP AK +++ W P
Sbjct: 361 IITRRTVFDLRKARERGHVLEGLAVALANVDRMIELIKAAPTPPVAKERLLAQAWE-PGE 419
Query: 421 SKIIGFNKKNYNTISKI-NNISKLQNNDM----------YKLSDIQAQEILKMPLQRLTN 469
++ + +S++ +I++ Q +D+ Y LS+ QAQEIL+M LQRLT
Sbjct: 420 ARAM---------LSRVEGDITQFQPDDLDARYGLKPDGYYLSETQAQEILQMRLQRLTG 470
Query: 470 MEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILN 529
+EQ KI+ +Y++V++++ DL DIL+ +R+ EIIT E++ ++ ++G + RRS I +N
Sbjct: 471 LEQDKIVGEYKDVMEQIADLLDILAKPERMTEIITTEMSALRAEFG----DARRSHIEVN 526
Query: 530 AINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIA 589
A + EDLI QD+V+T+S+ GY+KSQP++EYRAQ+RGGRGK A TK++DW+ QLF+A
Sbjct: 527 AYDIDVEDLITPQDLVVTISHSGYVKSQPLAEYRAQRRGGRGKLATGTKEDDWVEQLFVA 586
Query: 590 NTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDF 649
NTHD +LCFSN GR+YW+KV++ P G R SRGKP++N+F L+ EKIT +LP+ + F
Sbjct: 587 NTHDMLLCFSNRGRVYWMKVYESPMGGRGSRGKPLVNLFPLQAGEKITTVLPV----KAF 642
Query: 650 PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDS 709
+ +YVFM+T+ G VKKT L+ F N R +GIIAV L +D+LIGAA+TDG +D+MLFSD+
Sbjct: 643 DEQHYVFMATARGTVKKTPLTAFVNRRTAGIIAVALDEDDYLIGAAITDGQHDVMLFSDA 702
Query: 710 GKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIK 769
GKAVRF+E VR MGR ARGV GM+LE Q VIALLV+ ++ QSVLTATENGYGKRT I
Sbjct: 703 GKAVRFDEADVRPMGREARGVRGMQLEADQSVIALLVAEDETQSVLTATENGYGKRTSIT 762
Query: 770 EYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRST 829
EYT+H RGTKG+I+I+T++RNGKVVAA LV EIMLIT G+L+RTRV EIR+MGR+T
Sbjct: 763 EYTRHGRGTKGMIAIQTSERNGKVVAACLVRTSDEIMLITDTGVLVRTRVEEIREMGRAT 822
Query: 830 QGVILITVENKSKLCGVQ 847
QGV LI ++ K+ L VQ
Sbjct: 823 QGVTLIALDAKAHLIQVQ 840
>gi|30248349|ref|NP_840419.1| DNA gyrase subunit A [Nitrosomonas europaea ATCC 19718]
gi|30138235|emb|CAD84243.1| DNA gyrase/topoisomerase IV, subunit A [Nitrosomonas europaea ATCC
19718]
Length = 848
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/852 (61%), Positives = 678/852 (79%), Gaps = 9/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MEQFAKETLPVSLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++ELL DLDK T+DF NYDG E+EP +LP +IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSRIAHELLADLDKNTVDFGPNYDGSEQEPLILPAKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVID L +L +P+ I +L+ IPAPDFPTAGIIYG+S + DGY TG+GRV
Sbjct: 181 NIPPHNLGEVIDACLLLLRDPDVDIAELMACIPAPDFPTAGIIYGISGIKDGYQTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RA+TH EE ++ NR +IIIDELPYQVNK +LL +I +LV++K++E IS+LRDESDKSG
Sbjct: 241 IMRARTHFEELDKGNRHSIIIDELPYQVNKANLLVRIGELVRDKRIEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN LYK+TQ+Q+TFG+NM+ALV+GQP+LLNLK++L +F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKETQMQDTFGINMVALVDGQPRLLNLKQMLDHFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE H+LEGL +AL+N+D I +I++ TP EAK ++ TW V
Sbjct: 361 VVTRRTLFELRKARERGHLLEGLAVALSNVDEIIALIKAAPTPAEAKKGLMARTWRSSLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
+++ + + +D Y+LSD QAQ IL + LQRLT +EQ+KI+++Y
Sbjct: 421 EEMLLRAMIDAAVFRPETLAAGFGMSDQGYRLSDAQAQAILDLRLQRLTGLEQEKIVSEY 480
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
++ K+ DL DIL+N +RI II +EL IK ++G + RRSE++++A N +TEDLI
Sbjct: 481 REILDKIRDLLDILANPERITTIIVEELTAIKGQFG----DPRRSEVVIDAQNLNTEDLI 536
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
DMV+TLS+ GYIKSQ + +YRAQKRGGRGK+A+ T+++D+I+ LFIANTHD+ILCFS
Sbjct: 537 TPADMVVTLSHAGYIKSQLLDDYRAQKRGGRGKQAITTREDDFIDNLFIANTHDFILCFS 596
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW+KV+ +PQGSR SRG+P+ N+ L+ EKI +LP+ + F YVFMST
Sbjct: 597 SLGRVYWIKVYNVPQGSRTSRGRPVNNLVPLEQNEKINAVLPV----KSFDDTRYVFMST 652
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT LS FS PR +GIIA++L D+LIG ALT+G +D+MLFSD+GKA+RF+EN
Sbjct: 653 AGGTVKKTPLSEFSRPRTNGIIAIDLDEGDYLIGVALTEGKHDVMLFSDAGKAMRFDEND 712
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR GR+ARGV GM+L Q+VI+LLV++N+ +VLTATENGYGKRT I EYT+HNRGT+
Sbjct: 713 VRPTGRNARGVRGMKLGAGQQVISLLVADNENMAVLTATENGYGKRTPITEYTRHNRGTQ 772
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I TN RNGKVVAA LV EIMLITTGG++IRTRVSEIR+MGR+TQGV LI ++
Sbjct: 773 GMIAINTNVRNGKVVAAQLVESSDEIMLITTGGVMIRTRVSEIREMGRATQGVTLINLDA 832
Query: 840 KSKLCGVQRLCK 851
KL G++R+ +
Sbjct: 833 GEKLAGLERIVE 844
>gi|114331560|ref|YP_747782.1| DNA gyrase subunit A [Nitrosomonas eutropha C91]
gi|114308574|gb|ABI59817.1| DNA gyrase subunit A [Nitrosomonas eutropha C91]
Length = 848
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/859 (61%), Positives = 684/859 (79%), Gaps = 23/859 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MEQFAKETLPVSLEDEMKRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLIDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++ELL DLDK T+DF NYDG E+EP +LP +IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSRIAHELLADLDKNTVDFGPNYDGSEQEPLILPAKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN++EVID L +L +P+ I L+ IPAPDFPTAGIIYG+S + DGY TG+GRV
Sbjct: 181 NIPPHNISEVIDACLLLLSDPDIDIAGLMACIPAPDFPTAGIIYGISGIKDGYQTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RA+TH EE ++ NR +IIIDELPYQVNK +LL +I +LV++K++E IS+LRDESDKSG
Sbjct: 241 IMRARTHFEELDKGNRHSIIIDELPYQVNKANLLVRIGELVRDKRIEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN LYK+TQ+Q+TFG+NM+ALV+GQP+LLNLK++L YF+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVILNNLYKETQMQDTFGINMVALVDGQPRLLNLKQMLDYFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT+FELRKARE H+LEGL +AL+N+D I +I++ TP EAK ++ TW V
Sbjct: 361 VITRRTVFELRKARERGHLLEGLAVALSNVDEIIALIKAAPTPAEAKRGLMARTWRSSLV 420
Query: 421 SKII--------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ F + T + +N Y+LSD QAQ IL + LQRLT +EQ
Sbjct: 421 EEMLRRAMIDAAAFRPETLATGFGM-------SNQEYRLSDAQAQAILDLRLQRLTGLEQ 473
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
+KI+++Y+ ++ K+ DL ++L+NS+RI II +EL IK ++G + RRSE++++A +
Sbjct: 474 EKIVSEYKEILDKIRDLLNMLANSERITAIIIEELTAIKGQFG----DPRRSEVVIDAQD 529
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
STEDLI DMV+TLS+ GYIKSQ + +Y+AQKRGGRGK+A+ T+++D+I+ LFIANTH
Sbjct: 530 LSTEDLITPTDMVVTLSHAGYIKSQLLDDYQAQKRGGRGKQAITTREDDFIDNLFIANTH 589
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D+ILCFS+ GR+YW+KV+ +PQGSR SRG+PI N+ L+ EKI +LP+ + F
Sbjct: 590 DFILCFSSLGRVYWIKVYNVPQGSRTSRGRPINNLVPLEQHEKINAVLPV----KSFDDT 645
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+T+ G VKKT LS FS PR +GIIAV L D+LIG ALT+G +D+MLFSD+GKA
Sbjct: 646 RYVFMATAGGTVKKTPLSEFSRPRTNGIIAVALDEGDYLIGVALTEGKHDVMLFSDAGKA 705
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
+RF+EN VR GR+ARGV GM+L +QKVI+LLV++++ +VLTATENGYGKRT I EYT
Sbjct: 706 MRFDENDVRPTGRNARGVRGMKLGAEQKVISLLVADSENMTVLTATENGYGKRTSITEYT 765
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+HNRGT+G+I+I TNKRNGKVVAA LV EIMLITTGG++IRTRVSEIR+MGR+TQGV
Sbjct: 766 RHNRGTQGMIAINTNKRNGKVVAAQLVEPNDEIMLITTGGVMIRTRVSEIREMGRATQGV 825
Query: 833 ILITVENKSKLCGVQRLCK 851
ILI ++ KL G++R+ +
Sbjct: 826 ILINLDAGEKLAGLERIVE 844
>gi|339484195|ref|YP_004695981.1| DNA gyrase subunit A [Nitrosomonas sp. Is79A3]
gi|338806340|gb|AEJ02582.1| DNA gyrase, A subunit [Nitrosomonas sp. Is79A3]
Length = 856
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/852 (61%), Positives = 681/852 (79%), Gaps = 11/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MNQFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MNQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++ELLIDLDKET+DF NYD EKEP +LP +IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSRIAHELLIDLDKETVDFGPNYDDSEKEPLILPAKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+ L +L NP+ SI++LI+ IPAPDFPTAGIIYG+S V DGY TG+GRV
Sbjct: 181 NIPPHNLNEVIEACLALLKNPDISIDELIEYIPAPDFPTAGIIYGISGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH E+ + +R I++DELPYQVNK +LL +I +LV++KK+E IS+LRDESDKSG
Sbjct: 241 VMRARTHFEDMEKGSRQCIVVDELPYQVNKANLLIRIGELVRDKKIEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN LYK+TQ+Q+TFGMNM+AL++GQP+LLNLK+IL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVILNNLYKETQMQDTFGMNMVALLDGQPRLLNLKQILDAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE H+LEGL +AL+N+D I +I++ TP AK+ I+ W V
Sbjct: 361 VVTRRTVFELKKARERGHLLEGLAVALSNVDEIIALIKAAPTPAVAKDAIMAKVWRSQLV 420
Query: 421 SKIIGFNKKNYNTISK--INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+++ + N + + L+ Y+LSD QAQ IL++ LQRLT +EQ+KI+ +
Sbjct: 421 EEMLSRAMADANALRPDGLGEGFGLKAQG-YRLSDAQAQAILELRLQRLTGLEQEKIVEE 479
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +I+K+ID +IL+N +RI IIT+EL+ IK ++G RRSEII++ + S EDL
Sbjct: 480 YKEIIEKIIDYLNILANPERITSIITEELDAIKQQFGDK----RRSEIIVDTHDMSMEDL 535
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I D+V+TLS+ GYIKSQ + EYRAQKRGGRGK A TK++D+I++LFIANTHDYILCF
Sbjct: 536 ITPADVVVTLSHSGYIKSQLLDEYRAQKRGGRGKLATSTKEDDFIDKLFIANTHDYILCF 595
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YW+KV+++PQG R SRGKPIIN+ L+ EKI ILP+ + F + Y+FM+
Sbjct: 596 SSLGRVYWIKVYEVPQGGRLSRGKPIINLVQLEEGEKINAILPV----KAFDETRYIFMA 651
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT LS FS PR +GIIA+ L D+LIG LT+G +D+MLFSD+GKA+RF+EN
Sbjct: 652 TSFGTVKKTPLSEFSRPRNNGIIAIGLDEGDYLIGVELTEGKHDVMLFSDNGKAMRFSEN 711
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+ARGV GM+L QKVI+LLV+ N++ SVLTATENGYGKRT I EYT+HNRGT
Sbjct: 712 DVRPMGRTARGVRGMKLGSGQKVISLLVAENEELSVLTATENGYGKRTPISEYTRHNRGT 771
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I+IKT++RNGKVV A LV EIMLIT+GG+LIRTRV+E+R+M R+TQGV LI ++
Sbjct: 772 QGMIAIKTSERNGKVVTAKLVKPDDEIMLITSGGVLIRTRVNEVREMSRATQGVTLINLD 831
Query: 839 NKSKLCGVQRLC 850
KL G++R+
Sbjct: 832 AGEKLAGLERVV 843
>gi|301630199|ref|XP_002944211.1| PREDICTED: DNA gyrase subunit A-like, partial [Xenopus (Silurana)
tropicalis]
Length = 813
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/815 (63%), Positives = 649/815 (79%), Gaps = 35/815 (4%)
Query: 37 VRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSF 96
RDGLKPVHRRVL+AMHE+NN WNRP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ F
Sbjct: 9 ARDGLKPVHRRVLYAMHELNNDWNRPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDF 68
Query: 97 SLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDFISNYDGKEKEP 156
SLR LVDGQGNFGS+DGDSAAAMRYTE RL+KI++E+L D+ KET+DF NYDG E+EP
Sbjct: 69 SLRHMLVDGQGNFGSVDGDSAAAMRYTEIRLSKIAHEMLADIAKETVDFGPNYDGSEQEP 128
Query: 157 SVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPD 216
VLPTR+PNLL+NGS+GIAVGMATNIPPHNL EV+D L++L +PE SI+ L++IIPAPD
Sbjct: 129 LVLPTRLPNLLVNGSAGIAVGMATNIPPHNLNEVVDACLHLLRHPEASIDALMEIIPAPD 188
Query: 217 FPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEK 276
FPTAGIIYG++ V DGY TG+G+V++RAK H E+ +R R AII+DELPYQVNKK+L E+
Sbjct: 189 FPTAGIIYGINGVKDGYRTGRGKVVMRAKVHFEDIDRGQRQAIIVDELPYQVNKKTLQER 248
Query: 277 ISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLA 336
+++LV EKKLE IS+++DESDKSGMR+VIELKR E+PE+VLN LYKQTQLQ+TFGMNM+A
Sbjct: 249 MAELVHEKKLEGISHIQDESDKSGMRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVA 308
Query: 337 LVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQI 396
LV+GQP+L NLKE++ F+ HR+EV+ RRT+FELRKAR+ H+LEGL +AL NID FI+I
Sbjct: 309 LVDGQPRLCNLKELIAVFLQHRREVVTRRTVFELRKARDRGHVLEGLAVALANIDEFIRI 368
Query: 397 IRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQA 456
IR + TP AK +++ +Y+LSD QA
Sbjct: 369 IRESPTPPVAKAELMS-----------------------------------LYRLSDTQA 393
Query: 457 QEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGS 516
QEIL+M LQRLT +EQ KI+ +Y+ V+ + DL DIL+ +R+ II +EL ++ ++G
Sbjct: 394 QEILQMRLQRLTGLEQDKIVAEYKEVMAHIEDLLDILAKPERVSTIIGEELTAVREEFGQ 453
Query: 517 HKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMM 576
K RRSEI +A + STEDLI DMV+TLS+ GYIKSQP+SEYRAQKRGGRGK+A
Sbjct: 454 TKLGARRSEIEHSAQDLSTEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATA 513
Query: 577 TKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKI 636
TK++DWI+QLFIANTHDYILCFSN GRLYWLKVW++P GSR SRG+PI+NMF L+ EKI
Sbjct: 514 TKEDDWIDQLFIANTHDYILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKI 573
Query: 637 TVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAAL 696
V+LPL+ + R FPK+ YVFM+TS+G VKKT L FSNPRK+GIIAVNL + D+LIGAAL
Sbjct: 574 NVVLPLTGDMRSFPKDRYVFMATSMGTVKKTALDEFSNPRKAGIIAVNLDDGDYLIGAAL 633
Query: 697 TDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLT 756
TDG +D+MLFSD GKAVRF+EN VR +GR ARGV GM LE Q VIA+LV+ ++ QSVLT
Sbjct: 634 TDGQHDVMLFSDGGKAVRFDENDVRPLGRQARGVRGMTLEDSQSVIAMLVAEDESQSVLT 693
Query: 757 ATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIR 816
ATENGYGKRT I EYT+H RGTKG+I+I+ ++RNGKVVAATLV+ EIMLIT G+L+R
Sbjct: 694 ATENGYGKRTSIVEYTRHGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDTGVLVR 753
Query: 817 TRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
TRV+EIR++GR+TQGV LI ++ + L G+QR+ +
Sbjct: 754 TRVAEIRELGRATQGVTLIALDEGATLSGLQRIVE 788
>gi|451823141|ref|YP_007459415.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451775941|gb|AGF46982.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 865
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/857 (62%), Positives = 678/857 (79%), Gaps = 11/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FA E++ + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MDSFAMEMLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELHNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD S+YD +VR+AQ FS+R L+DGQGNFGSIDGDSAAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRYMLIDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KIS+ELL D++ ET+DF NYDG EKEP VLP++IPNLLING SGIAVGMAT
Sbjct: 121 RYTEVRLAKISHELLSDIENETVDFGLNYDGSEKEPLVLPSKIPNLLINGGSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G L+ L P+C+I++LI IPAPDFPT GIIYG+S V +GY TG+GRV
Sbjct: 181 NIPPHNLREVISGCLFYLTKPDCTIDELIDFIPAPDFPTGGIIYGISGVREGYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH E++ +++++AII+DELPYQVNKK+L E+I++LV KK+E IS++RDESDK G
Sbjct: 241 LMRAKTHFEDYKKDHKSAIIVDELPYQVNKKTLQERIAELVNSKKIEGISDIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E PEI+LN LYK TQLQ+T GMN++ALV GQPKLLNLK+I+ YF+ HR+E
Sbjct: 301 MRLVIELKRGESPEIILNNLYKNTQLQDTLGMNLVALVEGQPKLLNLKQIIGYFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRTIF+L KA+ AHILEGL +AL NID+FI II++ S+P A+ ++ W V
Sbjct: 361 VITRRTIFKLNKAKNRAHILEGLAVALANIDDFILIIKAASSPSIARQNLMNRDWPSDLV 420
Query: 421 SKII------GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKK 474
++ G +K Y S +N I + + +YKLS+ QAQEIL M LQRLT +EQ K
Sbjct: 421 RDMLVRFENSGIDKDVYRP-SDVNTIFGINSIGLYKLSEWQAQEILNMRLQRLTGLEQNK 479
Query: 475 IINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPS 534
+I +Y++++ + DL DILS S+RI EII +ELN +K ++ S + RRS I NA
Sbjct: 480 VIEEYKDIMSVIADLLDILSKSERITEIIVNELNEVKEEFSSEDSDPRRSYIEHNATELY 539
Query: 535 TEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDY 594
TEDLI DMV+TLS GY+KSQP+SEYR QKRGG GK+A K+ DW+ LFIAN+HD+
Sbjct: 540 TEDLIVPTDMVVTLSYNGYLKSQPLSEYRLQKRGGHGKQATSIKENDWVEHLFIANSHDF 599
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
+L FS+ GR+YWLKVW++PQG+R S+GKPI+NMF L EKITV+LP+ ++F +N Y
Sbjct: 600 LLFFSDLGRVYWLKVWEVPQGTRGSKGKPIVNMFPLSKNEKITVVLPV----KEFSENLY 655
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVR 714
VFM+T+ G+VKKT LS+FSNPRK+GIIAV L + D+LIGA LT+G YDIMLFSDSGKAVR
Sbjct: 656 VFMATANGVVKKTSLSDFSNPRKNGIIAVGLDDGDYLIGAELTNGDYDIMLFSDSGKAVR 715
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F+E VR++ RSARGV GM L K Q+V++LLVSN++++SVL ATENG+GKRT IK YT H
Sbjct: 716 FSEKDVRSVSRSARGVRGMVLGKNQRVVSLLVSNSEEKSVLIATENGFGKRTSIKHYTVH 775
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
NR TKG+I+I+ +KRNGKVV A LV+ EIMLITT G+L+RTRVSEIRKMGR TQGV L
Sbjct: 776 NRSTKGMIAIQNSKRNGKVVGAVLVDLSDEIMLITTSGVLVRTRVSEIRKMGRVTQGVTL 835
Query: 835 ITVENKSKLCGVQRLCK 851
I + + S L ++++ +
Sbjct: 836 ININSGSYLSKIRKVIE 852
>gi|348617922|ref|ZP_08884456.1| DNA gyrase, subunit A [Candidatus Glomeribacter gigasporarum BEG34]
gi|347816866|emb|CCD29110.1| DNA gyrase, subunit A [Candidatus Glomeribacter gigasporarum BEG34]
Length = 858
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/854 (60%), Positives = 662/854 (77%), Gaps = 14/854 (1%)
Query: 3 QFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRP 62
+A+E + + LEEEM +SYLDYAMSVIVGRALP V DGLKPVHRRVL+AMH MNN WNRP
Sbjct: 5 HYAQETLPVSLEEEMRRSYLDYAMSVIVGRALPSVYDGLKPVHRRVLYAMHLMNNDWNRP 64
Query: 63 FVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRY 122
K AR+VG+ +GKYHPH D + YD +VRMAQ+FSLR L+DGQGNFGS+DGD+ AAMRY
Sbjct: 65 HKKSARIVGDVIGKYHPHSDTAAYDTIVRMAQNFSLRYRLIDGQGNFGSVDGDNPAAMRY 124
Query: 123 TECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNI 182
TE R+ KI +ELL D+D+ET+DF NYDG E EP VLP R PNLL+NGSSGIAVGMATNI
Sbjct: 125 TEIRMAKIGHELLADIDQETVDFAPNYDGHESEPVVLPARAPNLLMNGSSGIAVGMATNI 184
Query: 183 PPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVII 242
PPHNL E++D LY+L P+ +I++LI I+PAPDFPTAGIIYG + +H GY +G+GRV++
Sbjct: 185 PPHNLNEIVDACLYLLKKPDATIDELIAIVPAPDFPTAGIIYGAAGIHQGYRSGRGRVVM 244
Query: 243 RAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMR 302
RAKTH E+ +R R AIIIDELPYQVNK+ LLE+++ LV EKKLE IS++RDESDKSGMR
Sbjct: 245 RAKTHFEDIDRGQRHAIIIDELPYQVNKRVLLERMAALVNEKKLEGISDIRDESDKSGMR 304
Query: 303 IVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVI 362
VIELKR E+PE+VLN LYKQTQLQ+TFG+NM+ALV+GQP+LLNL++IL YF+ HR+EVI
Sbjct: 305 AVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPRLLNLQQILGYFLAHRREVI 364
Query: 363 KRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSK 422
RRT FELR+ARE +H+LEGL +AL NID FI +I++ TP EAK ++ W P V
Sbjct: 365 TRRTRFELRRARERSHVLEGLAVALANIDTFIALIKTAQTPAEAKQALMARPWPSPLVRD 424
Query: 423 IIGFNKK------NYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
++ ++ ++ L+ + Y LS+ QAQEIL+M LQRLT +EQ KI+
Sbjct: 425 LLARVERLSAGGGAAVRPPDLDAEFGLRPDGAYALSETQAQEILQMRLQRLTGLEQDKIV 484
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
++Y +++K+ DL DIL+ +RI +I DEL +K ++G + RRS+I N + S E
Sbjct: 485 SEYRAMVEKISDLLDILARPERISALIGDELRALKQEFG----DARRSQIEFNTEDLSRE 540
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLI QD V+T+S+ GYIKSQP+ EYRAQKRGGRGK+A+ K++DWI LFIANTHD +L
Sbjct: 541 DLITPQDRVVTISHTGYIKSQPLDEYRAQKRGGRGKQAIAIKEDDWIENLFIANTHDSLL 600
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CFS+ G +YW+KV+++P GSR SRG+PI+NMF L EKIT +LP+ ++F YV
Sbjct: 601 CFSDRGHVYWIKVYEVPLGSRQSRGRPIVNMFPLAPDEKITAVLPV----KEFNARQYVL 656
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
MST+LG VKKT L FS P K GIIAV L ED+L GAA+TDG +D+MLFSD GKAVRF+
Sbjct: 657 MSTALGTVKKTPLDEFSRPMKKGIIAVKLDEEDYLAGAAITDGQHDVMLFSDCGKAVRFS 716
Query: 717 ENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNR 776
EN VRAMGR ARGV GM+LEK+Q+VIA+LV+ N++QSVL ATENG+GKRT ++EY +H R
Sbjct: 717 ENDVRAMGRGARGVRGMQLEKEQRVIAMLVAENEQQSVLIATENGFGKRTPVREYARHGR 776
Query: 777 GTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILIT 836
GTKG+I+I+T RNG+VVAATLV+ ++MLITT G+L+RTRV EIR++GR+ QGV LI
Sbjct: 777 GTKGMIAIRTTPRNGRVVAATLVHPDSQVMLITTAGVLVRTRVCEIRELGRAAQGVTLIH 836
Query: 837 VENKSKLCGVQRLC 850
++ S L G+Q +
Sbjct: 837 LDKGSTLSGLQHIA 850
>gi|325981795|ref|YP_004294197.1| DNA gyrase subunit A [Nitrosomonas sp. AL212]
gi|325531314|gb|ADZ26035.1| DNA gyrase, A subunit [Nitrosomonas sp. AL212]
Length = 852
Score = 1107 bits (2863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/853 (61%), Positives = 683/853 (80%), Gaps = 11/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MNQFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MNQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++ELL+DLDKET+DF NYD EKEP +LP +IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSRIAHELLVDLDKETVDFGPNYDDSEKEPLILPAKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EV++ L +L N SI++LI +IPAPDFPTAGIIYG++ V DGY TG+GRV
Sbjct: 181 NIPPHNLSEVVEACLALLKNSNISIDELIDLIPAPDFPTAGIIYGVNGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH E+ + NR +IIIDELPYQVNK +LL +I +LV++KK+E IS+LRDESDKSG
Sbjct: 241 VMRARTHFEDLEKGNRQSIIIDELPYQVNKANLLIRIGELVRDKKIEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN LYK+TQ+Q+TFGMNM+AL++GQP+LLNLK+IL F+ HR+E
Sbjct: 301 MRVVIELKRGEVPEVILNNLYKETQMQDTFGMNMVALLDGQPRLLNLKQILDAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE H+LEGL +AL+N+D I +I++ TP +AK ++ W+ V
Sbjct: 361 VVTRRTVFELKKARERGHLLEGLAVALSNVDEIIALIKAAPTPADAKEALMAKAWHSQLV 420
Query: 421 SKIIGFNKKNYNTISK--INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+++ + N + ++++ L+ Y LSD QAQ IL++ LQRLT +EQ+KI+ +
Sbjct: 421 EEMLTRAMADANALRPEGLDDMFGLKAQG-YHLSDAQAQAILELRLQRLTGLEQEKIVAE 479
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y++VI+K+ID DIL+N +RI +IIT+EL+ IK ++G RRSEI+++ + S EDL
Sbjct: 480 YKDVIEKIIDYLDILANPERITQIITEELDAIKLQFGDE----RRSEIVVDTQDLSMEDL 535
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I D+V+TLS+ GYIKSQ + +YRAQKRGGRGK A TK++D+I++LFIANTHDYILCF
Sbjct: 536 ITPADVVVTLSHTGYIKSQLLDDYRAQKRGGRGKLATSTKEDDFIDKLFIANTHDYILCF 595
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YW+KV+++PQG R SRGKPIIN L+ EKI ILP+ + F +N +VFM+
Sbjct: 596 SSLGRVYWIKVYEVPQGGRQSRGKPIINWVQLEEGEKINAILPV----KTFDENRFVFMA 651
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT LS FS PR +GIIA+ L DFLIG LT+G +D+MLFSD+GKA+RF+EN
Sbjct: 652 TSFGTVKKTPLSEFSRPRNNGIIAIGLDEGDFLIGVELTEGKHDVMLFSDNGKAMRFSEN 711
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+ARGV GM+L KVI++LV+ N+ +VLTATENGYGKRT I EYT+HNRGT
Sbjct: 712 DVRPMGRTARGVRGMKLGPGHKVISMLVAENEDLAVLTATENGYGKRTPISEYTRHNRGT 771
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I+I T+ RNGKVV A LV EIMLIT+GG+LIRTRV+E+R+M R+TQGV LI ++
Sbjct: 772 QGMIAIITSARNGKVVTAKLVKPDDEIMLITSGGVLIRTRVNEVREMSRATQGVTLINLD 831
Query: 839 NKSKLCGVQRLCK 851
KL G++R+ +
Sbjct: 832 AGEKLAGLERVVE 844
>gi|119897357|ref|YP_932570.1| DNA gyrase subunit A [Azoarcus sp. BH72]
gi|119669770|emb|CAL93683.1| DNA topoisomerase (ATP-hydrolysing) [Azoarcus sp. BH72]
Length = 877
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/852 (60%), Positives = 668/852 (78%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MTQFAKETLPISLEEEMRHSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I +ELL D+DKET+DF NYDG EKEP +LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMARIGHELLADIDKETVDFGPNYDGSEKEPLILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L +L +PE + LI+I+ APDFPTAG+IYGL VH+GY TG+GRV
Sbjct: 181 NIPPHNLGEVVDACLKLLEDPETDLEALIEIVKAPDFPTAGLIYGLHGVHEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
++RA+THIE + +R AII+DELPYQVNK++LLE+I++LV EKK+E IS +RDESDKS
Sbjct: 241 VMRARTHIEPIGKNSDREAIIVDELPYQVNKRTLLERIAELVNEKKVEGISEIRDESDKS 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIELKRNE+PE+VLN LYK TQLQ+TFGMNM+ALV+G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRVVIELKRNEMPEVVLNNLYKHTQLQDTFGMNMVALVDGKPRLLNLKQMLVCFLEHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRTIFEL+KAR+ HILEGL +AL+N+D I +I++ TP +AK ++E TW P
Sbjct: 361 EVVTRRTIFELKKARDRGHILEGLAVALSNVDEIIALIKAAPTPADAKRGLMERTWRSPL 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ YKLSD QAQ IL++ LQRLT +EQ KI+ +Y
Sbjct: 421 VEEMLSRALADSYRPEGLDPEFGFSAQG-YKLSDAQAQAILELRLQRLTGLEQDKIVGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
V+ + DL DIL+ +RI II +EL I+N++G + RRSEI+L+ + EDLI
Sbjct: 480 REVMDLITDLLDILARPERITAIIVEELTAIRNQFG----DPRRSEIVLSTAEINIEDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+DMV+TLS+ GY K QP+++YRAQ+RGGRGK+A KDED+I+ LF+ANTHD +LCFS
Sbjct: 536 TPEDMVVTLSHTGYFKRQPLADYRAQRRGGRGKQATSMKDEDFIDHLFVANTHDTVLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR YWLKV+++P+G+RNSRGKPI+N+F L EKIT +LP+ F + ++VFM+T
Sbjct: 596 SRGRAYWLKVYEVPEGTRNSRGKPIVNLFPLIEGEKITAVLPVQT----FDEEHFVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
S G VKKT L+ F+NPRK+GIIAVNL + D LIG A+TDG D+MLFSD+GKAVRF E+
Sbjct: 652 SEGTVKKTALTAFANPRKAGIIAVNLDDGDHLIGVAITDGECDVMLFSDAGKAVRFAESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR MGR ARGV GM LE Q+VIA+LV+ + QSVLTATENGYGKRT + EYT+H RGTK
Sbjct: 712 VRPMGREARGVRGMTLEDGQRVIAMLVAKGETQSVLTATENGYGKRTPVAEYTRHGRGTK 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I+T+ RNGK+V A LV+ E+MLI+TG +LIRT+V +IR++GR+TQGV LI ++
Sbjct: 772 GMIAIQTSDRNGKLVGAVLVDPTDEVMLISTGAVLIRTKVQDIRELGRATQGVTLINLDE 831
Query: 840 KSKLCGVQRLCK 851
+ L G++++ +
Sbjct: 832 GTYLAGIEKVAE 843
>gi|358638548|dbj|BAL25845.1| DNA gyrase subunit A [Azoarcus sp. KH32C]
Length = 870
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/851 (60%), Positives = 669/851 (78%), Gaps = 9/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE + I LE+EM SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE++N WN
Sbjct: 1 MTPFAKETLPISLEDEMRHSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I +ELL D++KET+DF NYDG EKEP VLP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMARIGHELLADIEKETVDFGPNYDGSEKEPLVLPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L VL +PE SI +LI+I+ APDFPTAG+IYGLS VHDGY TG+GRV
Sbjct: 181 NIPPHNLGEVLDACLKVLEDPEVSIEELIRIVQAPDFPTAGLIYGLSGVHDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH E+ + NR AII+DELPYQVNK++LLE+I++LV EKK+E IS +RDESDKSG
Sbjct: 241 VMRARTHFEDLEKGNRQAIIVDELPYQVNKRTLLERIAELVNEKKIEGISEIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN L+KQTQLQ+TFGMNM+ALV+G+P+ LNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLFKQTQLQDTFGMNMVALVDGKPRTLNLKQMLECFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRTIFELRKARE HILEGL +AL+N+D I +I++ TP +AK +++ W V
Sbjct: 361 VITRRTIFELRKARERGHILEGLAVALSNVDEIIALIKAAPTPSDAKRELMARVWRSTLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++ + L N Y+LSD+QAQ IL++ LQRLT +EQ KI+ +Y
Sbjct: 421 EEMLARAMAGSYRPEGLAEEFGLSANG-YRLSDVQAQAILELRLQRLTGLEQDKIVAEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
V+ + DL DIL+ +RI II +EL I+ ++G + RRSEI+LN + EDLIA
Sbjct: 480 EVMDVITDLLDILARPERITAIIVEELGAIRMQFG----DPRRSEIVLNTGEINIEDLIA 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+TLS+ GY K QP+++YRAQ+RGGRGK+A KD+D+I++LF+ANTHDYILCFS+
Sbjct: 536 PEDMVVTLSHGGYFKRQPLADYRAQRRGGRGKQATGMKDDDFIDRLFVANTHDYILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YWLKV+++P+G+RNSRG+PI+N+F L EKI +LP+ F +++VFM+T+
Sbjct: 596 RGRVYWLKVYEVPEGTRNSRGRPIVNLFPLVEGEKINAVLPVQA----FDDDHFVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+NPRK+GIIA +L + D LIG A+T+G D+MLFSD+GKAVRF+E V
Sbjct: 652 EGTVKKTSLTAFANPRKAGIIAASLDDGDRLIGVAITNGDSDVMLFSDAGKAVRFHEGDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR ARGV GM LE Q+VIA+LVS ++ SVLTATENGYGKRT + EYT+H RGTKG
Sbjct: 712 RPMGREARGVRGMTLEDGQRVIAMLVSKSEDLSVLTATENGYGKRTPVAEYTRHGRGTKG 771
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+T++RNGK+V A LV E+MLI+TGG+LIRT+V +IR++GR+TQGV LI ++
Sbjct: 772 MIAIQTSERNGKLVGACLVEESDEVMLISTGGVLIRTKVQDIRELGRATQGVTLINLDET 831
Query: 841 SKLCGVQRLCK 851
L ++++ +
Sbjct: 832 DSLASIEKVAE 842
>gi|451936524|ref|YP_007460378.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777447|gb|AGF48422.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 858
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/864 (60%), Positives = 693/864 (80%), Gaps = 9/864 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MN FA E++ + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MNSFAVEMLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YDA+VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDAIVRMAQDFSMRYILVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KIS+ELL D+D ET++F NYD EKEP +LP+RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKISHELLSDIDSETVNFGPNYDNSEKEPLILPSRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L+ L NP+CSI+++I +IPAPDFPT GII+GLS V DGY TG+GRV
Sbjct: 181 NIPPHNLREVINGCLFCLSNPDCSIDEIIDLIPAPDFPTGGIIHGLSGVRDGYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRAK H EE ++EN++ I++DE+PYQVNKKSL EKI++LV KK+E I ++RDESDK G
Sbjct: 241 VIRAKVHFEE-SKENKSRIVVDEIPYQVNKKSLQEKIAELVNSKKIEGIVDIRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VI+L+R E PE++LN LYK TQLQ++ GMN++ALV+GQPKLLNLK+I+ YF+ HR+E
Sbjct: 300 MRLVIDLRRGESPEVILNNLYKNTQLQDSIGMNLVALVDGQPKLLNLKQIISYFLQHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT F L KA+ HILEGL +AL NID FI II+S +TP A+ ++ W+ V
Sbjct: 360 VVTRRTFFRLNKAKIRGHILEGLAVALENIDEFISIIKSATTPSIARQNLMIRPWSSSLV 419
Query: 421 SKI---IGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++I + + ++ ++ IS N+++Y LS++QAQEIL M LQRLT +EQ KI++
Sbjct: 420 NEILLKVDVSSRHIYRPDGVSYISGFNNSELYSLSELQAQEILNMRLQRLTGLEQGKILD 479
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ V+ + +L DIL+ R+ +II +EL ++++++ S K++ R S+I ++AI +TED
Sbjct: 480 EYKEVMDTIANLLDILAKPDRVTQIINNELELVRDEFSSIKEDHRNSQIEVDAIELNTED 539
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI DMV+TL++ GY+KSQP+SEYR+QKRGG GK+A + K+ DWI+ LFIANTHDY+L
Sbjct: 540 LITPADMVVTLTHNGYLKSQPLSEYRSQKRGGHGKQATIIKENDWIDYLFIANTHDYLLF 599
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GR+YW+KVW+ PQG+R SRGKP++NMF L + EKITV+LP+ R+F ++ Y+FM
Sbjct: 600 FSDLGRVYWMKVWETPQGTRGSRGKPVVNMFPLNDNEKITVVLPV----REFTEDLYIFM 655
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ GIVKKT LS+FSNPRK+GIIAV L + D+LIGA LTDG +D+MLFSDSGKAVRF E
Sbjct: 656 ATARGIVKKTKLSDFSNPRKNGIIAVVLGDGDYLIGAELTDGKHDVMLFSDSGKAVRFYE 715
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
N VR+ GR++RGV GM ++ +VI+LLV+N++ +SVL ATENG+GKRT IK+YT+HNRG
Sbjct: 716 NDVRSTGRNSRGVRGMNMDSNYRVISLLVANDESKSVLVATENGFGKRTSIKKYTRHNRG 775
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
KG+ISI+T+ RNGK+V A LV EIMLIT G+L+RTRVSEIR+MGR TQGV L+ V
Sbjct: 776 AKGMISIQTSSRNGKMVGAILVKPDDEIMLITNCGVLVRTRVSEIRQMGRVTQGVKLMNV 835
Query: 838 ENKSKLCGVQRLCKITMIKKYIPV 861
+ S L GV+R+ + +I + + +
Sbjct: 836 DG-SLLSGVRRVVESDVIDESLDI 858
>gi|297538378|ref|YP_003674147.1| DNA gyrase subunit A [Methylotenera versatilis 301]
gi|297257725|gb|ADI29570.1| DNA gyrase, A subunit [Methylotenera versatilis 301]
Length = 882
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/855 (60%), Positives = 676/855 (79%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N +N
Sbjct: 1 MDQFAKETLPISLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL D+DKET+DF NYDG E EP ++P RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADIDKETVDFGPNYDGSEHEPLIMPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EV+D +L +PE I +LI+++PAPDFPTAGIIYG V +GY TG+GRV
Sbjct: 181 NIPPHNINEVLDACFALLKDPEMGIEELIELVPAPDFPTAGIIYGTVGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++R +TH+E+ R R A+I+DELPYQVNKK+ +EKI++LV EKK+E IS+LRDESDKSG
Sbjct: 241 VMRGRTHVEDLERGGRQALIVDELPYQVNKKTFVEKIAELVNEKKIEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR EI E+VLN LYKQTQLQ+TFGMNM+AL++GQP+LLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEIAEVVLNNLYKQTQLQDTFGMNMVALLDGQPRLLNLKQMLEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT+FEL+KAR HILEGL +AL N+D I II++ TP EAK ++ WN P V
Sbjct: 361 VITRRTVFELKKARARGHILEGLAVALANVDEMIAIIKAAPTPPEAKVALMAKAWNSPVV 420
Query: 421 SKIIGFNKKNYNTISKINNIS----KLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
+++ K+ S+ +S L N YKLSDIQAQEIL+M LQRLT +EQ K++
Sbjct: 421 EEML---KRAAMEASRPEGLSIEFGLLPNG--YKLSDIQAQEILQMRLQRLTGLEQDKVV 475
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
++Y+ V+ + DL DIL+ R+ II DEL I+ ++G RRSEI+ NA + S E
Sbjct: 476 SEYKEVMDIIADLLDILATPARVTAIINDELTEIRKQFGDK----RRSEIVANAQDLSLE 531
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
D I QD+V+TLS+ GY+KSQP+ EYRAQ+RGGRGK+A TK++D+I+++F+ANTHDYIL
Sbjct: 532 DFITPQDVVVTLSHTGYVKSQPLDEYRAQRRGGRGKQAAQTKEDDFIDKMFVANTHDYIL 591
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CFS+ G++YWLKV+++PQGSR RGKPI+N+F L+ EKI IL + ++F +N+++F
Sbjct: 592 CFSSRGQVYWLKVYEVPQGSRTGRGKPIVNLFPLEEGEKINAILSV----KEFDENHFIF 647
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
M+TSLG VKKT LS+F+NPRKSGIIA+NL DFLIGA +T+G+ D++L S+ GKAV F
Sbjct: 648 MATSLGTVKKTPLSDFANPRKSGIIAINLDEGDFLIGAEITNGANDVILVSNGGKAVWFT 707
Query: 717 ENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNR 776
E+ VR+MGR+ RGV GM+L Q+V++LL+++N +QSVL ATENGYGKRT++ ++ R
Sbjct: 708 EDDVRSMGRATRGVRGMKLADNQQVLSLLIADNDQQSVLVATENGYGKRTVLADFRHSGR 767
Query: 777 GTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILIT 836
GT+G+ +I ++RNG VVAA LVN EIMLITTGG+LIRTRV EIR++GR+TQGV LI
Sbjct: 768 GTQGVKAIAISERNGLVVAAKLVNEDDEIMLITTGGVLIRTRVKEIRELGRATQGVTLIN 827
Query: 837 VENKSKLCGVQRLCK 851
+ KL G++++ +
Sbjct: 828 LGEGEKLSGLEKIVE 842
>gi|421899406|ref|ZP_16329771.1| dna gyrase (subunit a)(type II topoisomerase) protein [Ralstonia
solanacearum MolK2]
gi|206590612|emb|CAQ37574.1| dna gyrase (subunit a)(type II topoisomerase) protein [Ralstonia
solanacearum MolK2]
Length = 842
Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/825 (62%), Positives = 659/825 (79%), Gaps = 27/825 (3%)
Query: 44 VHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLV 103
+HRRVL+AMHE+NN WNRP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LV
Sbjct: 1 MHRRVLYAMHELNNDWNRPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLV 60
Query: 104 DGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRI 163
DGQGNFGS+DGD+AAAMRYTE RL+KI++ELL D+DKET+DF NYDG E EPS+LP RI
Sbjct: 61 DGQGNFGSVDGDNAAAMRYTEIRLSKIAHELLADIDKETVDFEPNYDGSETEPSILPARI 120
Query: 164 PNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGII 223
PNLLINGSSGIAVGMATNIPPHNL EV+DG L++L NP+ ++++LI++IPAPDFPTAGII
Sbjct: 121 PNLLINGSSGIAVGMATNIPPHNLREVVDGCLHLLRNPDATVDELIELIPAPDFPTAGII 180
Query: 224 YGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKE 283
YG+S V +GY TG+GRV++RAKTH E+ +R R AII+DELPYQVNK++LLE+I++LV E
Sbjct: 181 YGISGVREGYRTGRGRVVMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTE 240
Query: 284 KKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPK 343
K++E IS++RDESDKSGMR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+
Sbjct: 241 KRVEGISDIRDESDKSGMRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPR 300
Query: 344 LLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTP 403
LLNL+++L F+LHR+EV+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP
Sbjct: 301 LLNLRQMLECFLLHRREVVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTP 360
Query: 404 QEAKNKIIESTWNLPDVSKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQ 455
AK +++ +W+ V ++ ++ +T+ + + +Q + +YKLSD Q
Sbjct: 361 PIAKQELMGRSWDSGLVRDML--SRAESDTVGGRTAYRPEGLLPVFGMQGDGLYKLSDTQ 418
Query: 456 AQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYG 515
AQEIL+M LQRLT +EQ KI+ +Y V+ ++ DL DIL+ +RI II +EL +I++++G
Sbjct: 419 AQEILQMRLQRLTGLEQDKIVQEYREVMAQIADLLDILARPERITAIIVEELTLIRSEFG 478
Query: 516 SHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAM 575
RRS+I NA TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A
Sbjct: 479 DE----RRSQIEHNATELDTEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAA 534
Query: 576 MTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEK 635
TK++DWI+ LF+ANTHDYILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EK
Sbjct: 535 ATKEDDWIDTLFVANTHDYILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEK 594
Query: 636 ITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAA 695
I VILP+ + F + ++VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA
Sbjct: 595 INVILPV----KQFDEQHFVFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGAD 650
Query: 696 LTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ--- 752
+TDG +D+MLFSD+GKAVRF+EN VR MGR ARGV GM LE+ Q+VIA+LV+ +
Sbjct: 651 ITDGQHDVMLFSDAGKAVRFDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEG 710
Query: 753 ------SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
SVLTATENGYGKRT I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIM
Sbjct: 711 EQAVAGSVLTATENGYGKRTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIM 770
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LITTGG+LIRTRV EIR+MGR+TQGV LI V +KL G+QR+ +
Sbjct: 771 LITTGGVLIRTRVDEIREMGRATQGVTLIAVGEGNKLSGLQRVVE 815
>gi|254468943|ref|ZP_05082349.1| DNA gyrase, A subunit [beta proteobacterium KB13]
gi|207087753|gb|EDZ65036.1| DNA gyrase, A subunit [beta proteobacterium KB13]
Length = 855
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/851 (61%), Positives = 676/851 (79%), Gaps = 9/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MNQFAKE + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE++N +N
Sbjct: 1 MNQFAKETLPVSLEDEMKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNSYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD + YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAAYDTIVRMAQDFSLRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KIS+ELL D+DK+T+DF NYDG E EP ++PTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKISHELLADIDKDTVDFGPNYDGSENEPLIMPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ + +L NP SI++L+ IP PDFPTAGII+G S + +GY TG+GRV
Sbjct: 181 NIPPHNLTEVINACVEILDNPNISIDELLNFIPGPDFPTAGIIHGNSGIKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH EE ++ R AIIIDELPYQVNKK+LLEKI++LV +KKLE IS+LRDESDKSG
Sbjct: 241 VMRARTHFEETDKGKREAIIIDELPYQVNKKNLLEKIAELVNDKKLEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR EIP++VLN LYKQTQLQ++FG+NM+AL++GQPKLLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEIPDVVLNNLYKQTQLQDSFGINMVALIDGQPKLLNLKQVLDAFLNHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT+FELRKARE HILEGL +AL N+D I+II+S+ +P EAK ++++ W V
Sbjct: 361 VITRRTVFELRKARERGHILEGLAVALENVDEMIKIIKSSPSPVEAKTELMQREWKSSVV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + ++ L+ N YKLSDIQAQEIL+M LQRLT +EQ KI+N+Y+
Sbjct: 421 SSMLKQGDATQYRPEGLLSVYGLKENG-YKLSDIQAQEILQMRLQRLTGLEQDKIVNEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + DL DIL+ R+ II EL IK YG RRSEI+ NA + S EDLIA
Sbjct: 480 EIMDVIADLIDILNKPDRVTSIIKTELEEIKETYGDD----RRSEIVENAEDLSIEDLIA 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
QDMV+TLS+ GYIK+Q + +YRAQKRGGRGK+A TKD+D+I+Q+F+AN+HD ILCFS+
Sbjct: 536 PQDMVVTLSHTGYIKAQALDDYRAQKRGGRGKQATATKDDDFIDQMFVANSHDNILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+++PQGSR SRGKPI+N+F L EKI IL + ++F N Y+FM+T+
Sbjct: 596 RGQVYWLKVYEVPQGSRVSRGKPIVNLFPLMPGEKINAILTV----KEFVDNEYIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT LS+FSNPRKSGIIA+ L N D+LIGA +T G DI+L S+ GKAV F E+ V
Sbjct: 652 KGTVKKTPLSDFSNPRKSGIIAIKLDNGDYLIGAGITKGENDIVLVSNHGKAVWFGESDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+ARGV GM+L +V++LL++ N+ QSV+ ATENGYGKRTL+ E+ + RGT+G
Sbjct: 712 RSMGRNARGVRGMKLTDGGEVLSLLIAENEAQSVMVATENGYGKRTLLSEFRRSGRGTQG 771
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ +I+ + RNG+VV A LV + E+MLITTGG+LIRTRVSEIR++GR+TQGV LI + +
Sbjct: 772 VKAIQVSDRNGQVVGAKLVGDHDELMLITTGGVLIRTRVSEIRELGRATQGVTLINLSDD 831
Query: 841 SKLCGVQRLCK 851
KL G++++ +
Sbjct: 832 EKLRGLEKVAE 842
>gi|291614526|ref|YP_003524683.1| DNA gyrase, A subunit [Sideroxydans lithotrophicus ES-1]
gi|291584638|gb|ADE12296.1| DNA gyrase, A subunit [Sideroxydans lithotrophicus ES-1]
Length = 849
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/853 (60%), Positives = 667/853 (78%), Gaps = 15/853 (1%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
QFAKE + + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WNR
Sbjct: 3 QQFAKETLPVSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWNR 62
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGD+AAAMR
Sbjct: 63 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYTLVDGQGNFGSVDGDNAAAMR 122
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++ELL DLDKET+DF NYDG E EP V P R PNLL+NGSSGIAVGMATN
Sbjct: 123 YTEIRMAKIAHELLADLDKETVDFGPNYDGSEHEPLVFPARFPNLLVNGSSGIAVGMATN 182
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHN+TEV+D L +L NP+ I LI+++PAPDFPTAG IYGL+ V +GY TG+GRV+
Sbjct: 183 IPPHNMTEVVDACLALLKNPDMDIEQLIELVPAPDFPTAGFIYGLAGVKEGYRTGRGRVV 242
Query: 242 IRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGM 301
+RA+TH E+ + +R AIIIDELPYQVNK +LL KI ++V+EK++E +S +RDESDKSGM
Sbjct: 243 MRARTHFEDIGKGDRQAIIIDELPYQVNKANLLMKIGEMVREKRIEGVSEIRDESDKSGM 302
Query: 302 RIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEV 361
R VIELKR E +++LN+LYK TQ+Q++FG+NM+A+V+GQPKL NLK+++ F+ HR+EV
Sbjct: 303 RAVIELKRGENADVILNQLYKDTQMQDSFGINMVAIVDGQPKLCNLKDVIEAFLRHRREV 362
Query: 362 IKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVS 421
+ RRTIFELRKARE HILEGL +AL+N+D I +I++ TP +AK +++ W V
Sbjct: 363 VTRRTIFELRKARERGHILEGLAVALSNVDEIIALIKAAPTPPDAKRELMARGWRSSLVE 422
Query: 422 KIIGFNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ + S+ ++ L Y LSD QAQ IL++ LQRLT +EQ KI+ +
Sbjct: 423 DML----SRVDEASRPEGLAPEFGLVKGTGYFLSDAQAQAILELRLQRLTGLEQDKIVGE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y V+ K+ DL DIL+ R+ +II DEL I++++G RRSEI+ + + S EDL
Sbjct: 479 YREVMDKITDLLDILAKPARVTQIIGDELITIRSQFGDK----RRSEIVTHTQDMSMEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+T+S+ GY+K+Q + EYRAQKRGGRGK+A TK++D+I+ LFIANTHDYILCF
Sbjct: 535 IAPEDVVVTMSHGGYMKAQKLDEYRAQKRGGRGKQATATKEDDFIDNLFIANTHDYILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
SN GR+YWLKV+ +PQG+R SRGKPI+N+ L+ EKI ILP+ + F ++ ++F +
Sbjct: 595 SNRGRVYWLKVYDVPQGTRISRGKPIVNLLPLEAGEKINAILPV----KQFAEDQFIFFA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT LS+F+NPRK+GIIA++L DFLIG A+TDG +D+MLFSD G+AVRF+E+
Sbjct: 651 TSEGTVKKTPLSDFANPRKAGIIAISLDEGDFLIGVAITDGKHDVMLFSDEGRAVRFDED 710
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+ARGV GM L K KVIALLV+ N++QSVLTATENGYGKRT I EYT+H RGT
Sbjct: 711 DVRGMGRTARGVRGMNLAKGGKVIALLVAENEEQSVLTATENGYGKRTPISEYTRHGRGT 770
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I+I+T++RNGKVVAATLV EIMLI T G+LIRTRV+EIR+MGR+TQGV L+ V
Sbjct: 771 QGMIAIQTSERNGKVVAATLVKPEDEIMLIGTSGVLIRTRVNEIREMGRATQGVTLMNVG 830
Query: 839 NKSKLCGVQRLCK 851
KL G+ R+ +
Sbjct: 831 EGEKLAGLSRIAE 843
>gi|237653702|ref|YP_002890016.1| DNA gyrase subunit A [Thauera sp. MZ1T]
gi|237624949|gb|ACR01639.1| DNA gyrase, A subunit [Thauera sp. MZ1T]
Length = 883
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/851 (60%), Positives = 662/851 (77%), Gaps = 9/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + I LEEEM SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MTQFAKETLPISLEEEMRHSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I +ELL D+DKET+DF NYDG EKEP VLP RIPNLLINGS+GIAVGMAT
Sbjct: 121 RYTEIRMARIGHELLADIDKETVDFGPNYDGSEKEPLVLPARIPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++D L +L P+ I LI I+ APDFPTAG+IYGL+ V +GY TG+GRV
Sbjct: 181 NIPPHNLGEIVDACLKLLAEPDTDIEALIDIVQAPDFPTAGLIYGLAGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RA+TH E + +R AII+DELPYQVNK++L E++++LV EKK+E IS +RDESDKSG
Sbjct: 241 IMRARTHFEPIGKTDRQAIIVDELPYQVNKRTLQERMAELVNEKKIEGISEIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLNKL+K TQLQ++FGMNM+ALV+G+P+LLNLK++L F+ HR+E
Sbjct: 301 MRLVIELKRGEMPEVVLNKLFKHTQLQDSFGMNMVALVDGKPRLLNLKQMLVCFLEHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ HILEGL +AL+N+D I +I++ TP +AK +++ W V
Sbjct: 361 VVTRRTIFELRKARDRGHILEGLAVALSNVDEIIALIKAAPTPADAKRELMAREWRSALV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++ + ++ LQ Y+LS+ QAQ IL++ LQRLT +EQ KI+ +Y
Sbjct: 421 EEMLSRALADSYRPEGLDPQYGLQAQG-YRLSEAQAQAILELRLQRLTGLEQDKIVGEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
V+ + DL DIL+ +RI II +EL I+N++G + RRSE+++N + EDLI
Sbjct: 480 EVMDVITDLLDILARPERITAIIVEELGAIRNQFG----DPRRSELVMNTAEINIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+TLS+ GY K QP+++YRAQ+RGGRGK+A KDED+I+ LF+ANTHD +LCFSN
Sbjct: 536 PEDMVVTLSHTGYFKRQPLADYRAQRRGGRGKQATSMKDEDFIDHLFVANTHDTVLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR YWLKV+++P+G+RNSRGKPI+N+F L EKIT +LP+ ++F + ++VFM+TS
Sbjct: 596 RGRCYWLKVYEVPEGTRNSRGKPIVNLFPLVEGEKITAVLPI----KEFDEEHFVFMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FSNPRK+GIIAVNL + D LIG A+TDG D+MLFSD+GKAVRF E V
Sbjct: 652 EGTVKKTALTAFSNPRKAGIIAVNLDDGDHLIGVAITDGQCDVMLFSDAGKAVRFAETDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR ARGV GM LE Q VIA+LV+ ++ QSVLTATENGYGKRT + EYT+H RGTKG
Sbjct: 712 RPMGRDARGVRGMTLEDGQAVIAMLVAKDESQSVLTATENGYGKRTPVAEYTRHGRGTKG 771
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+T+ RNG++V A LV E+MLI+TGG+LIRT V IR+MGRSTQGV LI ++
Sbjct: 772 MIAIQTSDRNGRLVGAVLVEPSDEVMLISTGGVLIRTSVESIREMGRSTQGVTLINLDEG 831
Query: 841 SKLCGVQRLCK 851
+ L ++++ +
Sbjct: 832 TFLASIEKVAE 842
>gi|207743943|ref|YP_002260335.1| dna gyrase (subunit a)(type II topoisomerase) protein [Ralstonia
solanacearum IPO1609]
gi|206595345|emb|CAQ62272.1| dna gyrase (subunit a)(type II topoisomerase) protein [Ralstonia
solanacearum IPO1609]
Length = 842
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/825 (62%), Positives = 659/825 (79%), Gaps = 27/825 (3%)
Query: 44 VHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLV 103
+HRRVL+AMHE+NN WNRP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LV
Sbjct: 1 MHRRVLYAMHELNNDWNRPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLV 60
Query: 104 DGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRI 163
DGQGNFGS+DGD+AAAMRYTE RL+KI++ELL D+DKET++F NYDG E EPS+LP RI
Sbjct: 61 DGQGNFGSVDGDNAAAMRYTEIRLSKIAHELLADIDKETVNFEPNYDGSETEPSILPARI 120
Query: 164 PNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGII 223
PNLLINGSSGIAVGMATNIPPHNL EV+DG L++L NP+ ++++LI++IPAPDFPTAGII
Sbjct: 121 PNLLINGSSGIAVGMATNIPPHNLREVVDGCLHLLRNPDATVDELIELIPAPDFPTAGII 180
Query: 224 YGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKE 283
YG+S V +GY TG+GRV++RAKTH E+ +R R +II+DELPYQVNK++LLE+I++LV E
Sbjct: 181 YGISGVREGYRTGRGRVVMRAKTHFEDIDRGQRQSIIVDELPYQVNKRTLLERIAELVTE 240
Query: 284 KKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPK 343
K++E IS++RDESDKSGMR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQP+
Sbjct: 241 KRVEGISDIRDESDKSGMRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPR 300
Query: 344 LLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTP 403
LLNL+++L F+LHR+EV+ RRT+F+LRKARE HILEGL +AL NID FI II++ TP
Sbjct: 301 LLNLRQMLECFLLHRREVVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTP 360
Query: 404 QEAKNKIIESTWNLPDVSKIIGFNKKNYNTIS--------KINNISKLQNNDMYKLSDIQ 455
AK +++ +W+ V ++ ++ +T+ + + +Q + +YKLSD Q
Sbjct: 361 PIAKQELMGRSWDSGLVRDML--SRAESDTVGGRTAYRPEGLLPVFGMQGDGLYKLSDTQ 418
Query: 456 AQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYG 515
AQEIL+M LQRLT +EQ KI+ +Y V+ ++ DL DIL+ +RI II +EL +I++++G
Sbjct: 419 AQEILQMRLQRLTGLEQDKIVQEYREVMAQIADLLDILARPERITAIIVEELTLIRSEFG 478
Query: 516 SHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAM 575
RRS+I NA TEDLI QD+V+TLS+ GY+KSQPISEYRAQKRGGRGK+A
Sbjct: 479 DE----RRSQIEHNATELDTEDLITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAA 534
Query: 576 MTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEK 635
TK++DWI+ LF+ANTHDYILCFSN GRLYWLKVW++PQGSRNSRG+PI+NMF L EK
Sbjct: 535 ATKEDDWIDTLFVANTHDYILCFSNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEK 594
Query: 636 ITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAA 695
I VILP+ + F + ++VFM+TS G VKKT L+ FSNPRK+GIIAV+L DFLIGA
Sbjct: 595 INVILPV----KQFDEQHFVFMATSKGTVKKTALTEFSNPRKAGIIAVDLDEGDFLIGAD 650
Query: 696 LTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ--- 752
+TDG +D+MLFSD+GKAVRF+EN VR MGR ARGV GM LE+ Q+VIA+LV+ +
Sbjct: 651 ITDGQHDVMLFSDAGKAVRFDENDVRPMGRQARGVRGMNLEEGQQVIAMLVAPAETAGEG 710
Query: 753 ------SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
SVLTATENGYGKRT I EYT+H RGTKG+I+I+T++RNGKVVAA LV EIM
Sbjct: 711 EQAVAGSVLTATENGYGKRTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIM 770
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LITTGG+LIRTRV EIR+MGR+TQGV LI V +KL G+QR+ +
Sbjct: 771 LITTGGVLIRTRVDEIREMGRATQGVTLIAVGEGNKLSGLQRVVE 815
>gi|71906869|ref|YP_284456.1| DNA gyrase subunit A [Dechloromonas aromatica RCB]
gi|71846490|gb|AAZ45986.1| DNA gyrase subunit A [Dechloromonas aromatica RCB]
Length = 879
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/852 (60%), Positives = 668/852 (78%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LE+EM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MDQFAKETLPISLEDEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI +++L DLDKET+DF NYDG E EP V+P RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIGHQMLEDLDKETVDFGPNYDGSENEPLVMPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G L +L NP SI DLI IPAPDFPTAG+IYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLNEVIAGCLALLENPALSIEDLIAYIPAPDFPTAGLIYGMTGVREGYQTGRGRV 240
Query: 241 IIRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
I+RA+TH E+ + N R A+I+DE+PYQVNKKSL+EKI++LV EKK+E IS++RDESDKS
Sbjct: 241 IMRARTHFEDMEKSNGRQALIVDEIPYQVNKKSLIEKIAELVNEKKIEGISDIRDESDKS 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIELKR E+ E++LN LYKQTQLQ+TFGMNM+ALV+GQP+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELKRGEVGEVILNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQMLECFLSHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EVI RRT++ELRKARE HILEGL +AL+N+D I +I++ TP +AK ++E TW
Sbjct: 361 EVITRRTVYELRKARERGHILEGLAVALSNVDEIITLIKAAPTPADAKRGLMERTWRSAV 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + + + L Y+LSD QAQ IL++ LQRLT +EQ KI+ +Y
Sbjct: 421 VEEMLVRAASDASRPEGLAPEFGLSAQG-YRLSDAQAQAILELRLQRLTGLEQDKIVGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
++V+ K++DL DIL+ +RI EII EL I+ ++G RRSEIIL S EDLI
Sbjct: 480 KDVMAKILDLLDILAKPERITEIIVTELVAIREQFGDE----RRSEIILQTHELSLEDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
QDMV+TLS+ GYIK+QP+++YRAQ+RGGRGK+A KDED+++ LF+ANTHD+ILCFS
Sbjct: 536 TPQDMVVTLSHGGYIKAQPLADYRAQRRGGRGKQAAAIKDEDFVDHLFMANTHDFILCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N GR YWLKV++ PQGSR SRGKPI+N+F L+ E+I +LP+ ++F + ++FM+T
Sbjct: 596 NRGRCYWLKVYEAPQGSRVSRGKPIVNLFPLEEGERINAVLPV----KEFADDKFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT LS+FSNPRK+GIIAV+L ++D+LIG LT G DI+L S++GKAV F+E
Sbjct: 652 RAGTVKKTPLSDFSNPRKAGIIAVDLLDDDYLIGVELTTGQSDIVLVSNAGKAVWFDEED 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR MGR ARGV GM+L+ Q VI+LLV+ + +Q+VL ATENG+GKRT++ ++ RGT+
Sbjct: 712 VRPMGRGARGVRGMKLQAGQAVISLLVAESDQQTVLVATENGFGKRTVLADFRHSGRGTQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+ +I ++RNG V+ A LV+ E+MLITTGG+LIRTRVSEIR MGR+TQGV LI++++
Sbjct: 772 GVKAIADSERNGVVIGAKLVDDNDEVMLITTGGVLIRTRVSEIRGMGRATQGVTLISLDD 831
Query: 840 KSKLCGVQRLCK 851
KL G++++ +
Sbjct: 832 GEKLAGLEKVAE 843
>gi|372488588|ref|YP_005028153.1| DNA gyrase subunit A [Dechlorosoma suillum PS]
gi|359355141|gb|AEV26312.1| DNA gyrase, A subunit [Dechlorosoma suillum PS]
Length = 873
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/851 (59%), Positives = 670/851 (78%), Gaps = 9/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+ N WN
Sbjct: 1 MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I ++LL D+DKET+DF NYDG E+EP +LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIGHQLLEDIDKETVDFGPNYDGSEQEPLILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+ L +L NP +I++LI IIPAPDFPTAGIIYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLGEVVAACLALLQNPNLTIDELIDIIPAPDFPTAGIIYGVAGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAKTH+E+ ++ NR A+IIDELPYQVNK++LLEKI +LV EK++E IS+LRDESDKSG
Sbjct: 241 VMRAKTHVEDLDKGNRQALIIDELPYQVNKRTLLEKIGELVNEKRIEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE+VLN L+K TQLQ+TFGMNM+ALV+GQP+LLNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRGEMPEVVLNNLFKMTQLQDTFGMNMVALVDGQPRLLNLKQMLECFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AH EGL +AL N+D I +I++ TP +A+ +++ W V
Sbjct: 361 VLNRRTVFELRKAREKAHTQEGLAVALDNVDEIIALIKAAPTPADARRELMARMWVSATV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++++ + I L Y+L++ QAQ IL++ LQRLT +E+ KI+ Y+
Sbjct: 421 TEMLARASLDATRPEGIAPEYGLSAQG-YRLTEAQAQAILELRLQRLTGLERDKIVADYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++K+ DL DIL+ +R+ EII +EL I++++G RRSEI+ A + EDLI
Sbjct: 480 ELLEKIADLMDILARPERVTEIIGEELTAIRDQFGDD----RRSEIVAYAQDLGIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
QDMV+TLS+ GYIKSQP+++YRAQ+RGGRGK+A KD+D+++ LF+ANTHDYILCFSN
Sbjct: 536 PQDMVVTLSHTGYIKSQPLADYRAQRRGGRGKQAAAMKDDDFVDHLFVANTHDYILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR YWLKV+++PQGSR SRGKPIINMF ++ E+I ILP+ ++F + YVFM T
Sbjct: 596 RGRCYWLKVYEVPQGSRISRGKPIINMFPMEEGEQINAILPV----KEFSDDKYVFMCTV 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+NFSNPRK+GIIAV+L D+LIGA LT G DI+L SD GKAV F E+ V
Sbjct: 652 QGTVKKTSLANFSNPRKAGIIAVDLDEGDYLIGADLTTGQSDIVLVSDGGKAVWFGEDQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR +RGV GM L++ Q VI+LLV+ +++++VL ATENGYGKRT + ++ + +RGT+G
Sbjct: 712 RPMGRQSRGVRGMMLQEGQSVISLLVAESEEETVLVATENGYGKRTRLGDFRRSSRGTQG 771
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+++I ++RNGK+VAA LV E+MLITTGG+LIRTRV+EIR++GR+TQGV LI+++
Sbjct: 772 VMAIAASERNGKIVAAKLVTDADEVMLITTGGVLIRTRVAEIRELGRATQGVTLISLDAG 831
Query: 841 SKLCGVQRLCK 851
KL G++++ +
Sbjct: 832 EKLSGLEKVAE 842
>gi|421470313|ref|ZP_15918702.1| DNA gyrase, A subunit [Burkholderia multivorans ATCC BAA-247]
gi|421475076|ref|ZP_15923063.1| DNA gyrase, A subunit [Burkholderia multivorans CF2]
gi|400227968|gb|EJO57931.1| DNA gyrase, A subunit [Burkholderia multivorans ATCC BAA-247]
gi|400230930|gb|EJO60666.1| DNA gyrase, A subunit [Burkholderia multivorans CF2]
Length = 824
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/816 (62%), Positives = 655/816 (80%), Gaps = 16/816 (1%)
Query: 44 VHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLV 103
+HRRVLFAMHE+NN WNR + K AR+VG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LV
Sbjct: 1 MHRRVLFAMHELNNDWNRAYKKSARIVGDVIGKYHPHGDSAVYETIVRMAQDFSLRYMLV 60
Query: 104 DGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRI 163
DGQGNFGSIDGD+AAAMRYTE R+ KI +ELL D+DKET+DF NYDG E +P +LP RI
Sbjct: 61 DGQGNFGSIDGDNAAAMRYTEIRMAKIGHELLADIDKETVDFGPNYDGSEMQPLILPARI 120
Query: 164 PNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGII 223
PNLLINGSSGIAVGMATNIPPHNL EV+D ++L+NP+ +I++LI+IIPAPDFPTAGII
Sbjct: 121 PNLLINGSSGIAVGMATNIPPHNLNEVVDACQHLLNNPDATIDELIEIIPAPDFPTAGII 180
Query: 224 YGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKE 283
YG++ V DGY TG+GRV++RA TH EE +R R AII+DELPYQVNK+SLLE+I++LV E
Sbjct: 181 YGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNE 240
Query: 284 KKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPK 343
KKLE IS++RDESDKSGMR+VIELKR E+PE+VLN LYK TQLQ+TFGMNM+ALV+GQPK
Sbjct: 241 KKLEGISDIRDESDKSGMRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPK 300
Query: 344 LLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTP 403
LLNLKEIL F+ HR+EV+ RRT++ELRKARE H+LEGL +AL NID FI II++ TP
Sbjct: 301 LLNLKEILQCFLSHRREVLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTP 360
Query: 404 QEAKNKIIESTWNLPDVSKIIGFNKKNYNTISK--------INNISKLQNNDMYKLSDIQ 455
AK +++ W+ V +++ + +N +Q + +YKLSD Q
Sbjct: 361 PIAKQELMAKAWDSSLVREMLTRAEAENAAAGGRAAYRPEGLNPAFGMQGDGLYKLSDTQ 420
Query: 456 AQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYG 515
AQEIL+M LQRLT +EQ KII +Y +V+ ++ DL DIL+ +RI +I +EL +K ++G
Sbjct: 421 AQEILQMRLQRLTGLEQDKIIGEYRDVMAQISDLLDILARPERITTMIGEELTTVKAEFG 480
Query: 516 SHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAM 575
+ RRS+I LNA +TEDLI QDMV+T+S+ GY+KSQP+SEYRAQKRGGRGK+A
Sbjct: 481 ----DARRSKIELNATELNTEDLITPQDMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQAT 536
Query: 576 MTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEK 635
K++DWI LFIANTHDY+LCFSN GR+YW+KV+++PQGSRNSRG+PI+NMF L++ EK
Sbjct: 537 QMKEDDWIETLFIANTHDYMLCFSNRGRVYWIKVYEVPQGSRNSRGRPIVNMFPLQDGEK 596
Query: 636 ITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAA 695
I V+LP+ ++F + +VFM+TSLG VKKT L FS P K GIIAV L D+LIGA+
Sbjct: 597 INVVLPV----KEFSADKFVFMATSLGTVKKTPLEAFSRPMKKGIIAVGLDEGDYLIGAS 652
Query: 696 LTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVL 755
+TDG++D+MLFSD+GKAVRF+EN VR MGR ARGV GM+L++ Q+VIALLV+ ++ QSVL
Sbjct: 653 ITDGAHDVMLFSDAGKAVRFDENDVRPMGREARGVRGMQLDEGQQVIALLVAGSEDQSVL 712
Query: 756 TATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILI 815
TATENG+GKRT I EYT+H RGTKG+I+I+T++RNGKVVAATLV+ +IMLITT G+LI
Sbjct: 713 TATENGFGKRTPITEYTRHGRGTKGMIAIQTSERNGKVVAATLVDAEDQIMLITTAGVLI 772
Query: 816 RTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
RTRVSEIR+MGR+TQGV LI+++ +KL G+Q++ +
Sbjct: 773 RTRVSEIREMGRATQGVTLISLDEGTKLSGLQQIAE 808
>gi|56475927|ref|YP_157516.1| DNA gyrase subunit A [Aromatoleum aromaticum EbN1]
gi|56311970|emb|CAI06615.1| DNA gyrase subunit A [Aromatoleum aromaticum EbN1]
Length = 876
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/852 (60%), Positives = 669/852 (78%), Gaps = 11/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE + I LE+EM SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MTPFAKETLPISLEDEMRHSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I +ELL D+DKET+DF NYDG E+EP +LP +IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMARIGHELLADIDKETVDFGPNYDGSEREPLILPAKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L +L NP+ I +LI ++ APDFPTA +IYGLS VHDGY TG+GRV
Sbjct: 181 NIPPHNLGEVLDACLKLLENPDTDIEELIALVKAPDFPTAALIYGLSGVHDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH E+ + NR AII+DELPYQVNK++LLE+I++LV EKK+E IS +RDESDKSG
Sbjct: 241 VMRARTHFEDLEKGNRQAIIVDELPYQVNKRTLLERIAELVNEKKIEGISEIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+PE+VLN L+KQTQLQ+TFGMNM+ALV+G+P+ LNLK++L F+ HR+E
Sbjct: 301 MRVVIELKRNEVPEVVLNNLFKQTQLQDTFGMNMVALVDGKPRTLNLKQMLDCFLSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT+FELRKARE HILEGL +AL+N+D I +I++ P +AK ++E TW+ V
Sbjct: 361 VITRRTVFELRKARERGHILEGLAVALSNVDEIIALIKAAPAPADAKRGLMERTWHSALV 420
Query: 421 SKIIGFN-KKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
+++ +Y S Y LSD QAQ IL++ LQRLT +EQ KI+ +Y
Sbjct: 421 EEMLARALAASYRPDSLAPEFGLSAQG--YGLSDAQAQAILELRLQRLTGLEQDKIVTEY 478
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
V+ + DL DIL+N RI II +EL I++++ + RRSEI+LN + EDLI
Sbjct: 479 REVMDVITDLLDILANPPRITAIIVEELGAIRHQF----DDPRRSEIVLNTAEINIEDLI 534
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS+ GY K QP+++YRAQ+RGGRGK+A KD+D+I++LF+ANTHDYILCFS
Sbjct: 535 APEDMVVTLSHAGYFKRQPLTDYRAQRRGGRGKQATGMKDDDFIDRLFVANTHDYILCFS 594
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YWLKV+++P+G+RNSRG+PI+N+F L EKI +LP+ F +++VFM+T
Sbjct: 595 SRGRVYWLKVYEVPEGTRNSRGRPIVNLFPLMEGEKINAVLPVQA----FDDDHFVFMAT 650
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L+ FSNPRK+GIIA NL + D LIG A+TDG+ D+MLFSD+GKAVRF E
Sbjct: 651 AEGTVKKTALTAFSNPRKAGIIAANLDDGDRLIGVAITDGNSDVMLFSDAGKAVRFPEGD 710
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR MGR ARGV GM LE+ Q+VIA+LV+ +++ SVLTATENGYGKRT + EYT+H RGTK
Sbjct: 711 VRPMGREARGVRGMNLEEGQRVIAMLVAKDEELSVLTATENGYGKRTPVAEYTRHGRGTK 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I+T+ RNGK+V A LV E+MLI+TGG+LIRTRV +IR++GR+TQGV LI ++
Sbjct: 771 GMIAIQTSDRNGKLVGACLVEESDEVMLISTGGVLIRTRVQDIRELGRATQGVTLINLDE 830
Query: 840 KSKLCGVQRLCK 851
+ L G++++ +
Sbjct: 831 GTSLAGIEKVAE 842
>gi|226940755|ref|YP_002795829.1| DNA gyrase subunit A [Laribacter hongkongensis HLHK9]
gi|226715682|gb|ACO74820.1| GyrA [Laribacter hongkongensis HLHK9]
Length = 859
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/848 (60%), Positives = 663/848 (78%), Gaps = 9/848 (1%)
Query: 4 FAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPF 63
FAKE I + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WNRP+
Sbjct: 6 FAKETIPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWNRPY 65
Query: 64 VKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYT 123
K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYT
Sbjct: 66 KKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYPLVDGQGNFGSIDGDNAAAMRYT 125
Query: 124 ECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIP 183
E R+ KI++ELL D++KET+DF NYDG E EP VLP +IPNLLINGSSGIAVGMATNIP
Sbjct: 126 EIRMAKIAHELLADIEKETVDFGPNYDGSEHEPLVLPAKIPNLLINGSSGIAVGMATNIP 185
Query: 184 PHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIR 243
PHNL EV+D +L +L N + +I++LI IIPAPDFPTAGIIYGL+ V +GY +G+GRV+IR
Sbjct: 186 PHNLNEVVDALLALLANSDMTIDELIDIIPAPDFPTAGIIYGLAGVREGYRSGRGRVVIR 245
Query: 244 AKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRI 303
A+TH+E+ R +R A+IIDELPYQVNK +LL KI +LV+EK ++ IS+LRDESDKSGMR+
Sbjct: 246 ARTHVEDIGRGDRQALIIDELPYQVNKANLLIKIGELVREKAIDGISDLRDESDKSGMRV 305
Query: 304 VIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIK 363
VIELKR E+P++VLN LYKQTQLQ++FGMNM+ALV+GQP+LLNLK+IL F+ HR+EV+
Sbjct: 306 VIELKRGEVPDVVLNNLYKQTQLQDSFGMNMVALVDGQPRLLNLKQILEEFLRHRREVVT 365
Query: 364 RRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKI 423
RRTIFELRKARE H+LEGL +AL+N+D I +I++ TP AK +++ W P V ++
Sbjct: 366 RRTIFELRKARERGHVLEGLAVALSNVDEIIALIKAAPTPPVAKAELMARQWRSPLVEEM 425
Query: 424 IGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVI 483
+ + + + LQ N Y+LS+ QAQ IL++ LQRLT +EQ KI+ +Y +V+
Sbjct: 426 LARVELDKARPDGLLPEFGLQANG-YRLSETQAQAILELRLQRLTGLEQDKIVAEYRDVM 484
Query: 484 KKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQD 543
++DL DIL+ +R+ +II DELN IK ++G + RRSEI + + EDLI QD
Sbjct: 485 DTIMDLLDILARPERVSQIIADELNQIKTQFG----DTRRSEIEPFGGDINLEDLITPQD 540
Query: 544 MVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGR 603
MV+TLS+ GY+K+QP+++Y+AQ+RGGRGK+A TKDED+I LF+ANTHD++LCFS+ GR
Sbjct: 541 MVVTLSHTGYMKTQPVTDYQAQRRGGRGKQAAATKDEDFIENLFVANTHDFLLCFSSAGR 600
Query: 604 LYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGI 663
+YWLKV+++PQGSR SRGKPI+N+ L EKI ILP+ + F YVFM+T+ G
Sbjct: 601 MYWLKVYELPQGSRQSRGKPIVNLLPLVEGEKINAILPV----KGFSDTEYVFMATARGT 656
Query: 664 VKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAM 723
VKKT LS FSN R +GIIAV+L D+LIGAA+T G+ ++MLFSD+GKAVRF+E VR M
Sbjct: 657 VKKTPLSAFSNRRSAGIIAVDLDEGDYLIGAAVTSGNSEVMLFSDAGKAVRFDEADVRPM 716
Query: 724 GRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIIS 783
GR+ARGV GM L Q+VI +LVSN + VLTAT NGYGKRT I +Y K RGT+G+I+
Sbjct: 717 GRNARGVRGMELGDAQQVIGMLVSNEETSQVLTATANGYGKRTPIGDYRKSRRGTQGVIA 776
Query: 784 IKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKL 843
I T +RNG +VA LV E+ML+TTGG+LIRTRVSE+R+ GR+ QGV LI ++ +L
Sbjct: 777 IDTGERNGALVAVALVADSDELMLMTTGGVLIRTRVSEVRETGRAAQGVRLINLDAGEQL 836
Query: 844 CGVQRLCK 851
++++ +
Sbjct: 837 VSLEKIAE 844
>gi|451813010|ref|YP_007449463.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|451778979|gb|AGF49859.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 858
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/860 (61%), Positives = 687/860 (79%), Gaps = 9/860 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MN FA E++ + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MNSFAVEMLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD S+YDA+VRMAQ FS+R L+DGQGNFGS+DGDSAAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDQSVYDAIVRMAQDFSMRYVLIDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL++IS+ELL D+D ET++F NYD E+EP +LP+RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSRISHELLADIDSETVNFGPNYDNSEQEPLILPSRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
+IPPHNL EVI+G L+ L NP+CSI+++I +IPAPDFPT GII+G+S + DGY TG+GRV
Sbjct: 181 SIPPHNLREVINGCLFCLSNPDCSIDEIIDLIPAPDFPTGGIIHGISGIIDGYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRAK H EE ++EN++ I++DE+PYQVNKKSL E+I++LV KK+E I ++RDESDK G
Sbjct: 241 VIRAKVHFEE-SKENKSRIVVDEIPYQVNKKSLQERIAELVNSKKIEGIVDIRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VI+L+R E PEIVLN LYK TQLQ++ GMN++ALV+GQPKLLNLK+I+ F+ HR+E
Sbjct: 300 MRLVIDLRRGESPEIVLNNLYKNTQLQDSIGMNLVALVDGQPKLLNLKQIIICFLQHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L KA+ HILEG +AL NIDNFI II+S +TP A+ +++ W V
Sbjct: 360 VVTRRTVFRLNKAKARGHILEGFAVALENIDNFISIIKSAATPSIARQSLMQCPWPSTLV 419
Query: 421 SKI---IGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ I + + ++ ++S L N+ +Y LS++QAQEIL M LQRLT +EQ KII+
Sbjct: 420 NDILLRVDLSLRHIYRPESATSVSGLGNDGLYYLSELQAQEILNMRLQRLTGLEQGKIID 479
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y V+ + DL DIL+ R+ +II++EL ++K ++ S K + R S+I +N+ +TED
Sbjct: 480 EYREVMDTITDLLDILAKPDRVTKIISNELELVKEEFSSLKGDPRNSQIEINSAELNTED 539
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI DMV+TL++ GY+KSQP+SEYR+QKRGG GK+A + K+ DWI+ LFIANTHDY+L
Sbjct: 540 LITPTDMVVTLTHNGYLKSQPLSEYRSQKRGGHGKQATVIKENDWIDYLFIANTHDYLLF 599
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GR+YW+KVW+ PQG+R SRGKP++NMF L EKITV+LP+ R+F + Y+FM
Sbjct: 600 FSDLGRVYWMKVWETPQGTRGSRGKPVVNMFPLDENEKITVVLPV----REFTDDLYIFM 655
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ GIVKKT LS+FSNPR+SGIIAV L + D+LIGA LTDG +D+MLFSDSGKAVRF E
Sbjct: 656 ATAKGIVKKTPLSDFSNPRRSGIIAVVLGDGDYLIGAELTDGKHDVMLFSDSGKAVRFYE 715
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
N VR+MGR++RGV G+ ++ K +VI+LLV+N++ +SVL ATENG+GKRT IKEYT+HNRG
Sbjct: 716 NDVRSMGRNSRGVRGINMDSKHRVISLLVANDEDKSVLVATENGFGKRTSIKEYTRHNRG 775
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
KG+ISI+T+ RNGK+V A LV EIMLIT GG+L+RTRVSEIR+MGR TQGV L+ V
Sbjct: 776 AKGMISIQTSARNGKMVGAILVKPDDEIMLITNGGVLVRTRVSEIRQMGRVTQGVRLMNV 835
Query: 838 ENKSKLCGVQRLCKITMIKK 857
+ S L GV+R+ + +I +
Sbjct: 836 DG-SLLSGVRRVVESDVIDE 854
>gi|74316966|ref|YP_314706.1| DNA gyrase subunit A [Thiobacillus denitrificans ATCC 25259]
gi|74056461|gb|AAZ96901.1| DNA gyrase, subunit A [Thiobacillus denitrificans ATCC 25259]
Length = 849
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/852 (60%), Positives = 667/852 (78%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+E+ N WN
Sbjct: 1 MEQFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTMVRMAQDFSLRYPLIDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL DLDKET+DF NYDG E+EP VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIAHELLADLDKETVDFGPNYDGSEQEPLVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLT++ + + +L P I LI I+ APDFPTAGIIYGLS V DGY TG+GRV
Sbjct: 181 NIPPHNLTDICNALFALLDAPATDIESLISIVQAPDFPTAGIIYGLSGVRDGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRE-NRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
++RA H+E+ ++ + AIIIDELPYQVNK +LL +I +LV++K+++ I++LRDESDKS
Sbjct: 241 VMRATCHVEDLDKSGGKQAIIIDELPYQVNKANLLIRIGELVRDKQIDGIADLRDESDKS 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+ IELKR E ++VLN LYKQTQ+Q+TFGMNM+AL++GQP+LLNLKE+L F+ HR+
Sbjct: 301 GMRVYIELKRGENADVVLNNLYKQTQMQDTFGMNMVALIDGQPRLLNLKEMLDAFLRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+F+LRKARE HILEGL +AL N+D +++I+S+ TP AK +++ W
Sbjct: 361 EVVTRRTVFDLRKARERGHILEGLAVALANVDEIVELIKSSETPAIAKERLLGRAWKSAM 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ Y+ + L + D Y LS+IQAQ IL+M LQRLTN+E KI+ +Y
Sbjct: 421 VEEMLARIDPEYSRPVNMGPEFGL-HADGYHLSEIQAQRILEMQLQRLTNLESDKILAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ K+ DL DIL+N RI +II +EL +++++G RRS I+ NA + S EDLI
Sbjct: 480 KEIMAKIADLLDILANPARITQIIREELTQVRDQFGDG----RRSTIVENAQDMSMEDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TLS+ GY+KSQP+ +YRAQKRGGRGK+A TKDED+I ++F+ANTHDYILCFS
Sbjct: 536 KPEEMVVTLSHGGYMKSQPLDDYRAQKRGGRGKQAAGTKDEDFIEKMFVANTHDYILCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N GRLYWLKV+ +PQG R +RGKPI+N+ L++ EKI+ +LP+ + F +YVFM+T
Sbjct: 596 NRGRLYWLKVYNVPQGGRAARGKPIVNLLPLEDGEKISALLPV----KTFDDEHYVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ GIVKKT LS FS PR +GIIAV L + D L GA++TDG +D+MLFSDSGKAVRF+EN
Sbjct: 652 ANGIVKKTPLSEFSRPRTAGIIAVGLDDGDVLCGASITDGRHDVMLFSDSGKAVRFDEND 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR MGR+ARGVIGM+L K K+I+LLV+ ++ VLTATENGYGKRT I EYT+H R T+
Sbjct: 712 VRPMGRAARGVIGMKLAKGAKLISLLVAEDENDFVLTATENGYGKRTPIAEYTRHARATQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I+T++RNGKVVAA LV EIMLITTGG+LIRTRV EIR M R+TQGV LI ++
Sbjct: 772 GMIAIQTSERNGKVVAANLVKADDEIMLITTGGVLIRTRVKEIRAMSRATQGVTLINLDK 831
Query: 840 KSKLCGVQRLCK 851
KL ++++ +
Sbjct: 832 GEKLISLEKVAE 843
>gi|302878364|ref|YP_003846928.1| DNA gyrase subunit A [Gallionella capsiferriformans ES-2]
gi|302581153|gb|ADL55164.1| DNA gyrase, A subunit [Gallionella capsiferriformans ES-2]
Length = 879
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/852 (59%), Positives = 662/852 (77%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFAKE + + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MEQFAKETLPVSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF NYDG E EP V P R PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELLADLDKETVDFGPNYDGSEHEPLVFPARFPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVID L +L NPE I +LI+ +PAPDFPTAG IYGL+ V +GY TG+GRV
Sbjct: 181 NIPPHNMTEVIDACLALLKNPEMDIEELIEYVPAPDFPTAGFIYGLAGVKEGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RA+ H E+ + R AIIIDELPYQVNK +LL KI ++V+EK+LE IS +RDESDKSG
Sbjct: 241 IMRARCHFEDIGKGERQAIIIDELPYQVNKANLLMKIGEMVREKRLEGISEIRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR VIELKR E +++LNKLYK TQ+Q++FG+NM+A+V+GQP+LLNLK+++ F+ HR+E
Sbjct: 301 MRAVIELKRGENADVLLNKLYKDTQMQDSFGINMVAIVDGQPRLLNLKQVMDAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE H+LEGL +AL+N+D I +I++ P +AK +++ +W V
Sbjct: 361 VVTRRTIFELRKARERGHVLEGLAVALSNVDEIIALIKAAPAPSDAKRELMAKSWRSELV 420
Query: 421 SKIIG--FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ + + ++ + N Y LSD QAQ IL++ LQRLT MEQ KII +
Sbjct: 421 EDMLSRVSDASRPDGLAPQFGLIVADNARFYHLSDAQAQAILELRLQRLTGMEQDKIIGE 480
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y V+ K+ DL DIL+ +R+ II DEL +K ++G RRSEI+ + + S EDL
Sbjct: 481 YREVMDKIADLLDILAKPERVTAIIGDELVAVKTQFGDK----RRSEIVTHTHDMSMEDL 536
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K+Q + +Y+AQKRGGRG++A KD+D+I+ LF+ANTH++ILCF
Sbjct: 537 IPPEDVVVTLSHGGYMKAQKMDDYQAQKRGGRGRQATRNKDDDFIDNLFVANTHNFILCF 596
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
SN GR+YW+KV+ +PQGS +RGKPI+N+ L+ EKI ILP++ +F ++ YVF +
Sbjct: 597 SNKGRVYWMKVYDVPQGSSGARGKPIVNLLPLEEGEKINAILPVT----EFAEDKYVFFA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L++FS P K GIIA+NL +D+LIG A+TDG +D+MLFS+SGKAVRF+E
Sbjct: 653 TANGTVKKTTLTDFSRPMKRGIIAINLDEDDYLIGVAITDGHHDVMLFSNSGKAVRFDEA 712
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR GR++RGV GM+L + Q+VI++LV+ N++QSVLTATENGYGKRT + EYT+H RGT
Sbjct: 713 DVRETGRASRGVRGMKLHENQQVISMLVAENEQQSVLTATENGYGKRTPVGEYTRHGRGT 772
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I+I+T++RNGKVVAATLVN EIM+I T G+LIRTRV EIR+MGR+TQGV L+ +E
Sbjct: 773 QGMIAIQTSERNGKVVAATLVNPEDEIMMIGTNGVLIRTRVREIREMGRTTQGVTLMNLE 832
Query: 839 NKSKLCGVQRLC 850
+L G+ R+
Sbjct: 833 KGERLAGLSRIA 844
>gi|257094472|ref|YP_003168113.1| DNA gyrase subunit A [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257046996|gb|ACV36184.1| DNA gyrase, A subunit [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 872
Score = 1080 bits (2794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/872 (57%), Positives = 677/872 (77%), Gaps = 10/872 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE + + LE+EM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MEAFAKETLPVSLEDEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I +ELL D+DKET+DF NYDG E+EP V+P RIPNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMARIGHELLADIDKETVDFGPNYDGSEEEPLVMPARIPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E+ID L +L+N E +I++LI ++P PDFPTAGIIYG++ V +GY TG+GRV
Sbjct: 181 NIPPHNLGEIIDACLALLNNAEVTIDELIDLVPGPDFPTAGIIYGVAGVREGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
++R +TH E+ ++ NR AIIIDELPYQVNK++LLEKI +LV EK++E IS+LRDESDKS
Sbjct: 241 VMRGRTHFEDMDKGNNRQAIIIDELPYQVNKRTLLEKIGELVNEKRIEGISDLRDESDKS 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIELKR E+ E+VLN LYKQTQLQ+TFGMNM+ALV+GQP+LLNLK++L F+ HR+
Sbjct: 301 GMRVVIELKRGEVAEVVLNCLYKQTQLQDTFGMNMVALVDGQPRLLNLKQMLECFLRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE AHI EGL +AL N+D I +I+++ TP +A+ ++ W P
Sbjct: 361 EVLTRRTVFELRKARERAHIQEGLAVALDNVDEIIALIKASPTPADARRGLMSRLWTSPT 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V++++ + + L + Y LS+ QAQ IL++ LQRLT +E+ KI+ Y
Sbjct: 421 VAEMLQRAALDATRPQGLGLEYGLSASG-YLLSEAQAQAILELRLQRLTGLERDKIVADY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
++ ++ DL DIL+ +RI E+I +EL I+ ++G RRSEI+++ + ED I
Sbjct: 480 GELLARIADLMDILARPERITEMIVEELTAIRAQFGDK----RRSEIVISTQDLGIEDFI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
DMV+TLS+ GYIKSQP+++YRAQ+RGGRGK+A K +D+++ LF+ANTHD+ILCF+
Sbjct: 536 TPVDMVVTLSHTGYIKSQPLADYRAQRRGGRGKQAAAMKTDDFVDHLFVANTHDFILCFT 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N GR+YWLKV+++PQG+R SRGKPI+N+F + EKI+ ILP+ ++F + Y+FM T
Sbjct: 596 NRGRVYWLKVYEVPQGTRTSRGKPIVNLFPFEEGEKISAILPV----KEFTDDRYIFMCT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT LS+FSNPRK+GIIAV L +ED LIGA +T+G+ D++L SD+GKAV F+E
Sbjct: 652 AQGTVKKTPLSDFSNPRKAGIIAVALDDEDVLIGAEITNGTQDVVLVSDAGKAVWFDEED 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR MGR+ARGV GMRL +Q+V++LLV++N +Q+VL ATENG+GKRT++ ++ RGT+
Sbjct: 712 VRPMGRTARGVRGMRLADQQQVLSLLVADNDQQTVLVATENGFGKRTVLADFRHSGRGTQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I ++RNG+VVAA LV EIMLITTGG+LIRTRV EIR++GR+TQGV LI ++
Sbjct: 772 GVIAIAGSERNGRVVAARLVRDEDEIMLITTGGVLIRTRVREIRELGRATQGVTLIALDA 831
Query: 840 KSKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
KL G++++ + + ++ G A+G
Sbjct: 832 GEKLAGLEKIVETEDDAEIADLVEQPGEPAAG 863
>gi|438000080|ref|YP_007183813.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|429339314|gb|AFZ83736.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
Length = 853
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/854 (61%), Positives = 683/854 (79%), Gaps = 9/854 (1%)
Query: 7 EVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKC 66
E++ + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WNRP+ K
Sbjct: 2 EMLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWNRPYKKS 61
Query: 67 ARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECR 126
AR+VG+ +GKYHPHGD S+YDA+VRMAQ FS+R L+DGQGNFGS+DGDSAAAMRYTE R
Sbjct: 62 ARIVGDVIGKYHPHGDQSVYDAIVRMAQDFSMRYVLIDGQGNFGSVDGDSAAAMRYTEIR 121
Query: 127 LNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHN 186
L++IS+ELL D+D ET++F NYD E+EP +LP+RIPNLL+NGSSGIAVGMAT+IPPHN
Sbjct: 122 LSRISHELLADIDSETVNFGPNYDNSEQEPLILPSRIPNLLVNGSSGIAVGMATSIPPHN 181
Query: 187 LTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKT 246
L EVI+G L+ L NP+CSI+++I +IPAPDFPT GII+G+S + DGY TG+GRV+IRAK
Sbjct: 182 LREVINGCLFCLSNPDCSIDEIIDLIPAPDFPTGGIIHGISGIIDGYKTGRGRVVIRAKV 241
Query: 247 HIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIE 306
H EE ++EN++ I++DE+PYQVNKKSL E+I++LV KK+E I ++RDESDK GMR+VI+
Sbjct: 242 HFEE-SKENKSRIVVDEIPYQVNKKSLQERIAELVNSKKIEGIVDIRDESDKDGMRLVID 300
Query: 307 LKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRT 366
L+R E PEIVLN LYK TQLQ++ GMN++ALV+GQPKLLNLK+I+ F+ HR+EV+ RRT
Sbjct: 301 LRRGESPEIVLNNLYKNTQLQDSIGMNLVALVDGQPKLLNLKQIIICFLQHRREVVTRRT 360
Query: 367 IFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKI--- 423
+F L KA+ HILEG +AL NIDNFI II+S +TP A+ +++ W V+ I
Sbjct: 361 VFRLNKAKARGHILEGFAVALENIDNFISIIKSAATPSIARQSLMQCPWPSTLVNDILLR 420
Query: 424 IGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVI 483
+ + ++ ++S L N+ +Y LS++QAQEIL M LQRLT +EQ KII++Y V+
Sbjct: 421 VDLSLRHIYRPESATSVSGLGNDGLYYLSELQAQEILNMRLQRLTGLEQGKIIDEYREVM 480
Query: 484 KKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQD 543
+ DL DIL+ R+ +II++EL ++K ++ S K + R S+I +N+ +TEDLI D
Sbjct: 481 DTITDLLDILAKPDRVTKIISNELELVKEEFSSLKGDPRNSQIEINSAELNTEDLITPTD 540
Query: 544 MVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGR 603
MV+TL++ GY+KSQP+SEYR+QKRGG GK+A + K+ DWI+ LFIANTHDY+L FS+ GR
Sbjct: 541 MVVTLTHNGYLKSQPLSEYRSQKRGGHGKQATVIKENDWIDYLFIANTHDYLLFFSDLGR 600
Query: 604 LYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGI 663
+YW+KVW+ PQG+R SRGKP++NMF L EKITV+LP+ R+F + Y+FM+T+ GI
Sbjct: 601 VYWMKVWETPQGTRGSRGKPVVNMFPLDENEKITVVLPV----REFTDDLYIFMATAKGI 656
Query: 664 VKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAM 723
VKKT LS+FSNPR+SGIIAV L + D+LIGA LTDG +D+MLFSDSGKAVRF EN VR+M
Sbjct: 657 VKKTPLSDFSNPRRSGIIAVVLGDGDYLIGAELTDGKHDVMLFSDSGKAVRFYENDVRSM 716
Query: 724 GRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIIS 783
GR++RGV G+ ++ K +VI+LLV+N++ +SVL ATENG+GKRT IKEYT+HNRG KG+IS
Sbjct: 717 GRNSRGVRGINMDSKHRVISLLVANDEDKSVLVATENGFGKRTSIKEYTRHNRGAKGMIS 776
Query: 784 IKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKL 843
I+T+ RNGK+V A LV EIMLIT GG+L+RTRVSEIR+MGR TQGV L+ V+ S L
Sbjct: 777 IQTSARNGKMVGAILVKPDDEIMLITNGGVLVRTRVSEIRQMGRVTQGVRLMNVDG-SLL 835
Query: 844 CGVQRLCKITMIKK 857
GV+R+ + +I +
Sbjct: 836 SGVRRVVESDVIDE 849
>gi|347540031|ref|YP_004847456.1| DNA gyrase subunit A [Pseudogulbenkiania sp. NH8B]
gi|345643209|dbj|BAK77042.1| DNA gyrase, A subunit [Pseudogulbenkiania sp. NH8B]
Length = 861
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/849 (59%), Positives = 660/849 (77%), Gaps = 10/849 (1%)
Query: 4 FAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPF 63
FAKE I I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WNR +
Sbjct: 6 FAKETIPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWNRAY 65
Query: 64 VKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYT 123
K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGD+AAAMRYT
Sbjct: 66 KKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYPLIDGQGNFGSVDGDNAAAMRYT 125
Query: 124 ECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIP 183
E R+ +I++ELL D++KET+DF NYDG E+EP +LP +IPNLLINGSSGIAVGMATNIP
Sbjct: 126 EIRMARIAHELLADIEKETVDFGPNYDGSEQEPLILPAKIPNLLINGSSGIAVGMATNIP 185
Query: 184 PHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIR 243
PHNL EVIDG L VL + + +I++LI IIPAPDFPTAGIIYG + V +GY TG+GRVI+R
Sbjct: 186 PHNLNEVIDGCLAVLASSDITIDELIDIIPAPDFPTAGIIYGTAGVKEGYRTGRGRVIMR 245
Query: 244 AKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRI 303
A+TH E+ + +R AII+DELPYQVNK LLE+I +LV++K++E IS+LRDESDKSGMR+
Sbjct: 246 ARTHFEDIGKGDRQAIIVDELPYQVNKARLLERIGELVRDKQIEGISDLRDESDKSGMRV 305
Query: 304 VIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIK 363
VIELKR E+PE+VLN LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+EV+
Sbjct: 306 VIELKRGEMPEVVLNHLYKLTQLQDSFGINMVALVDGQPRLLNLKQILEEFLRHRREVVT 365
Query: 364 RRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKI 423
RRTIFELRKARE HILEGL +AL+N+D I +I+++ TP AK ++E W P V ++
Sbjct: 366 RRTIFELRKARERGHILEGLAVALSNVDEIIALIKASETPPVAKIALMEREWRSPLVEEM 425
Query: 424 IGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVI 483
+ ++ + L+ YKLS++QAQ IL++ LQRLT +EQ KI+ +Y ++
Sbjct: 426 LARVDQDKARPDGLLPEFGLKEQG-YKLSEVQAQAILELRLQRLTGLEQDKIVGEYREIM 484
Query: 484 KKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQD 543
+ ++DL DIL+ +RI +II+DELN +K ++G + RRSEI + + EDLI QD
Sbjct: 485 EVILDLIDILARPERINQIISDELNAVKTQFG----DTRRSEIEPFGGDINIEDLITPQD 540
Query: 544 MVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGR 603
MV+T+S+ GYIK+QP+ +YR+Q+RGGRGK+A TKD+D+I LF+ANTHDY+LCFS++GR
Sbjct: 541 MVVTVSHTGYIKTQPVDDYRSQRRGGRGKQAAATKDDDFIETLFVANTHDYVLCFSSFGR 600
Query: 604 LYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGI 663
YW+KV+ +PQG RNSRGKPI+N+ SL EKI +LP+ ++F + YVFM T+ G
Sbjct: 601 CYWIKVYDLPQGGRNSRGKPIVNVLSLAEGEKINAMLPV----KEFRDDQYVFMCTANGT 656
Query: 664 VKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAM 723
VKKT L +FS PR +GIIAVNL D LIG ALT G +MLFSD+GKAVRF+E VRAM
Sbjct: 657 VKKTPLVDFSRPRTAGIIAVNLDEGDNLIGVALTHGDDQVMLFSDAGKAVRFSETDVRAM 716
Query: 724 GRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIIS 783
GR+A GV GM L + Q+VI+LLV+ ++ Q VLTA++ GYGKRT E+ +RGT+G+I+
Sbjct: 717 GRNATGVRGMMLGEGQQVISLLVTCSEDQMVLTASDGGYGKRTRAGEFRHTSRGTQGVIA 776
Query: 784 IKTNKRNG-KVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSK 842
+ + G K+VAA+LV ++MLITTGG+LIRT+VSE+R+ GRS QGV LI ++ K
Sbjct: 777 MDLTDKTGLKLVAASLVEETDDVMLITTGGVLIRTKVSEVRETGRSAQGVRLINLDEGEK 836
Query: 843 LCGVQRLCK 851
L + ++ +
Sbjct: 837 LISLVKVAE 845
>gi|3550423|gb|AAC34892.1| DNA gyrase A subunit [Methylovorus sp. SS1]
Length = 846
Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/854 (58%), Positives = 663/854 (77%), Gaps = 17/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+QFAKE + I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MDQFAKETLPISLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL D+DKET+DF NYDG E EP ++P RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELLADIDKETVDFGPNYDGSEHEPLIMPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L +L NPE ++++LI+IIPAPDFPTAGIIYG V + Y TG+GRV
Sbjct: 181 NIPPHNLNEVVDACLALLKNPETTVDELIEIIPAPDFPTAGIIYGTMGVKEAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++R +TH+E+ + NR A+IIDELPYQVNKKSL+EKI++LV EKK+E IS+LRDESDKSG
Sbjct: 241 VMRGRTHVEDMEKGNRQALIIDELPYQVNKKSLIEKIAELVNEKKIEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN LYKQTQLQ+TFGMNM+AL++GQP+LLNLK++L F HR+E
Sbjct: 301 MRVVIELKRGEVPEVILNNLYKQTQLQDTFGMNMVALLDGQPRLLNLKQMLEAFFGHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT+FEL KA E H+LEGL +AL N+D I +I++ TP EAK ++ TW P V
Sbjct: 361 VITRRTVFELGKA-ERGHVLEGLAVALANVDEMIALIKAAPTPPEAKKSLMSRTWTSPVV 419
Query: 421 SKIIGFNKKNYNTISKINNIS---KLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ K+ S+ +S + N Y+LSD+QAQEIL+M LQRLT +EQ KI+N
Sbjct: 420 EEML---KRAAMEASRPEGLSVDFGMTPNG-YRLSDVQAQEILQMRLQRLTGLEQDKIVN 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ V+ + DL DIL+ +R+ ++I DEL I+ ++G RSEI+ NA + S ED
Sbjct: 476 EYKEVMDVIADLLDILAKPERVTQMIVDELATIRQQFGDSC----RSEIVHNAQDLSLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI QD+V+TLS+ GY+KSQP+ EYRAQ+RGGRGK+A TK++D+I+++F+ANTHDYILC
Sbjct: 532 LITPQDVVVTLSHTGYVKSQPLDEYRAQRRGGRGKQATATKEDDFIDKMFVANTHDYILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GR+YWLK + + + ++ + + + +E LP+ ++F +N+++FM
Sbjct: 592 FSSRGRVYWLKYTKCRKAAASAVQAYRQPLPAGRGRED-QCHLPV----KEFDENHFIFM 646
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L FSNPR++GIIA+NL D+LIGA +T+G+ DI+L S+ GKAV F+E
Sbjct: 647 ATAQGTVKKTALVEFSNPRRAGIIAINLDEGDYLIGAEVTNGANDIVLVSNGGKAVWFDE 706
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VRAMGR+ RGV GM+L KQ+VI+LL++ + KQ+VL ATENGYGKRT++ ++ RG
Sbjct: 707 EDVRAMGRNTRGVRGMKLMPKQRVISLLIAEDDKQTVLVATENGYGKRTVLSDFRHSGRG 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ +I T+ RNG VV A LVN EIMLITTGG+LIRTRV EIR++GR+TQGV LI +
Sbjct: 767 TQGVKAIATSDRNGSVVGARLVNDEDEIMLITTGGVLIRTRVKEIRELGRATQGVTLINL 826
Query: 838 ENKSKLCGVQRLCK 851
KL G++++ +
Sbjct: 827 GENEKLSGLEKVVE 840
>gi|224824087|ref|ZP_03697195.1| DNA gyrase, A subunit [Pseudogulbenkiania ferrooxidans 2002]
gi|224603506|gb|EEG09681.1| DNA gyrase, A subunit [Pseudogulbenkiania ferrooxidans 2002]
Length = 861
Score = 1049 bits (2713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/849 (59%), Positives = 659/849 (77%), Gaps = 10/849 (1%)
Query: 4 FAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPF 63
FAKE I I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WNR +
Sbjct: 6 FAKETIPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWNRAY 65
Query: 64 VKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYT 123
K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGD+AAAMRYT
Sbjct: 66 KKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYPLIDGQGNFGSVDGDNAAAMRYT 125
Query: 124 ECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIP 183
E R+ +I++ELL D++KET+DF NYDG E+EP +LP +IPNLLINGSSGIAVGMATNIP
Sbjct: 126 EIRMARIAHELLADIEKETVDFGPNYDGSEQEPLILPAKIPNLLINGSSGIAVGMATNIP 185
Query: 184 PHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIR 243
PHNL EVIDG L VL + + +I++LI IIPAPDFPTAGIIYG + V +GY TG+GRVI+R
Sbjct: 186 PHNLNEVIDGCLAVLASSDITIDELIDIIPAPDFPTAGIIYGTAGVKEGYRTGRGRVIMR 245
Query: 244 AKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRI 303
A+TH E+ + +R AII+DELPYQVNK LLE+I +LV++K++E IS+LRDESDKSGMR+
Sbjct: 246 ARTHFEDIGKGDRQAIIVDELPYQVNKARLLERIGELVRDKQIEGISDLRDESDKSGMRV 305
Query: 304 VIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIK 363
VIELKR E+PE+VLN LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+EV+
Sbjct: 306 VIELKRGEMPEVVLNHLYKLTQLQDSFGINMVALVDGQPRLLNLKQILEEFLRHRREVVT 365
Query: 364 RRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKI 423
RRTIFELRKARE HILEGL +AL+N+D I +I+++ TP AK ++E W P V ++
Sbjct: 366 RRTIFELRKARERGHILEGLAVALSNVDEIIALIKASETPPVAKIALMEREWRSPLVEEM 425
Query: 424 IGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVI 483
+ ++ + L+ YKLS++QAQ IL++ LQRLT +EQ KI+ +Y ++
Sbjct: 426 LARVDQDKARPDGLLPEFGLKEQG-YKLSEVQAQAILELRLQRLTGLEQDKIVGEYREIM 484
Query: 484 KKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQD 543
+ ++DL DIL+ +RI +II+DELN IK ++G + RRSEI + + EDLI QD
Sbjct: 485 EVILDLIDILARPERINQIISDELNAIKTQFG----DARRSEIEPFGGDINIEDLITPQD 540
Query: 544 MVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGR 603
MV+T+S+ GYIK+QP+ +YR+Q+RGGRGK+A TKD+D+I LF+ANTHDY+LCFS++GR
Sbjct: 541 MVVTVSHSGYIKTQPVDDYRSQRRGGRGKQAAATKDDDFIETLFVANTHDYVLCFSSFGR 600
Query: 604 LYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGI 663
YW+KV+ +PQG RNSRGKPI+N+ L EKI +LP+ ++F + +VFM T+ G
Sbjct: 601 CYWIKVYDLPQGGRNSRGKPIVNVLPLAEGEKINAMLPV----KEFRDDQFVFMCTANGT 656
Query: 664 VKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAM 723
VKKT L +FS PR +GIIAVNL D LIG ALT G +MLFSD+GKAVRF+E VRAM
Sbjct: 657 VKKTPLVDFSRPRTAGIIAVNLDEGDNLIGVALTHGDDQVMLFSDAGKAVRFSETDVRAM 716
Query: 724 GRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIIS 783
GR+A GV GM L + Q+VI+LLV+ ++ Q VLTA++ GYGKRT E+ +RGT+G+I+
Sbjct: 717 GRNATGVRGMMLGEGQQVISLLVTCSEDQMVLTASDGGYGKRTRAGEFRHTSRGTQGVIA 776
Query: 784 IKTNKRNG-KVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSK 842
+ + G K+VAA+LV ++MLITTGG+LIRT+VSE+R+ GRS QGV LI ++ K
Sbjct: 777 MDLTDKTGLKLVAASLVEETDDVMLITTGGVLIRTKVSEVRETGRSAQGVRLINLDEGEK 836
Query: 843 LCGVQRLCK 851
L + ++ +
Sbjct: 837 LISLVKVAE 845
>gi|34497753|ref|NP_901968.1| DNA gyrase subunit A [Chromobacterium violaceum ATCC 12472]
gi|34103609|gb|AAQ59970.1| DNA gyrase, subunit A [Chromobacterium violaceum ATCC 12472]
Length = 866
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/847 (58%), Positives = 649/847 (76%), Gaps = 10/847 (1%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
N FAKE + I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE++N WNR
Sbjct: 4 NLFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNDWNR 63
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VR+AQ FSLR LVDGQGNFGS+DGD+AAAMR
Sbjct: 64 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRLAQDFSLRYPLVDGQGNFGSVDGDNAAAMR 123
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ +I++ELL D++KET+DF NYDG E EP +LP +IPNLL+NGSSGIAVGMATN
Sbjct: 124 YTEIRMARIAHELLADIEKETVDFGPNYDGSEHEPLILPAKIPNLLVNGSSGIAVGMATN 183
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL EV+D L +L N + +I++LI IIPAPDFPTAGIIYG + V +GY TG+GRVI
Sbjct: 184 IPPHNLNEVVDACLALLANSDLTIDELIDIIPAPDFPTAGIIYGTAGVKEGYRTGRGRVI 243
Query: 242 IRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGM 301
+RA+TH E + +R AII+DE+PYQVNK LLE+IS+LV++K++E IS+LRDESDKSGM
Sbjct: 244 MRARTHTEPIGKGDREAIIVDEIPYQVNKARLLERISELVRDKQIEGISDLRDESDKSGM 303
Query: 302 RIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEV 361
R+VIELKR E+PE+VLN L+K TQLQ++FGMNM+ALV+GQP+LLNLK+IL F+ HR+EV
Sbjct: 304 RVVIELKRGEMPEVVLNHLFKMTQLQDSFGMNMVALVDGQPRLLNLKQILEEFLRHRREV 363
Query: 362 IKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVS 421
+ RRTIFEL+KARE HILEGL +AL+N+D I +I+++ P +AK ++ W V
Sbjct: 364 VTRRTIFELKKARERGHILEGLAVALSNVDEIIALIKASEAPPQAKAALMARAWRSSLVE 423
Query: 422 KIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYEN 481
++ + + I+ ++ D Y LSD QAQ IL M LQRLT +EQ KI+ +Y
Sbjct: 424 DMLSRVEGDKARPENIDPAFGMK-EDGYHLSDTQAQAILDMRLQRLTGLEQDKIVGEYRE 482
Query: 482 VIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIAS 541
++ ++DL DIL+ +RI +II +EL I+ ++G + RRSEI + + EDLI
Sbjct: 483 IMDVILDLLDILAKPERISQIIGEELTAIRAQFG----DPRRSEIEPYGGDINIEDLITP 538
Query: 542 QDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNY 601
QDMV+T+S+ GYIK+QPI +Y +Q+RGGRGK+A TKD+D+I LF+ANTHDY+LCFS+
Sbjct: 539 QDMVVTISHTGYIKAQPIDDYSSQRRGGRGKQAAATKDDDFIETLFVANTHDYVLCFSSR 598
Query: 602 GRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSL 661
GR YW KV+ +PQG R SRGKP++N+ L+ EKI +LP+ ++F + +VFM T+
Sbjct: 599 GRCYWRKVYDLPQGGRQSRGKPMVNVLPLEEGEKINALLPV----KEFRDDQFVFMCTAN 654
Query: 662 GIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
G VKKT L +FS PR +GIIAVNL + D LIG ALT G IMLFSD+GKAVRF+E VR
Sbjct: 655 GTVKKTPLVDFSRPRTAGIIAVNLDDGDNLIGVALTHGDDQIMLFSDAGKAVRFSETDVR 714
Query: 722 AMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGI 781
MGR+A GV GM L +VI+LLVSN+++Q VLTA++ GYGKRT + ++ + +RGT+G+
Sbjct: 715 PMGRNATGVRGMMLGDDHQVISLLVSNSEQQMVLTASDGGYGKRTCVGDFRRTSRGTQGV 774
Query: 782 ISIKTNKRNG-KVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
I++ + G K+VAA+LV +IMLITTGG+LIRT+V+E+R+ GRS QGV LI ++
Sbjct: 775 IAMDLTDKTGLKLVAASLVEETDDIMLITTGGVLIRTKVAEVRETGRSAQGVRLINLDEG 834
Query: 841 SKLCGVQ 847
KL G++
Sbjct: 835 EKLIGLE 841
>gi|303256830|ref|ZP_07342844.1| DNA gyrase, A subunit [Burkholderiales bacterium 1_1_47]
gi|302860321|gb|EFL83398.1| DNA gyrase, A subunit [Burkholderiales bacterium 1_1_47]
Length = 955
Score = 1008 bits (2607), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/845 (57%), Positives = 651/845 (77%), Gaps = 11/845 (1%)
Query: 11 ILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVV 70
I LE+EM +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAM E+NN+WN K ARVV
Sbjct: 73 ISLEDEMKRSYLDYAMSVIMGRALPDVRDGLKPVHRRVLFAMFELNNMWNTQHKKSARVV 132
Query: 71 GETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKI 130
G+ +GKYHPHGDV+ Y+ +VRMAQ FS+R LVDGQGNFGS+DGD AAAMRYTE RL K+
Sbjct: 133 GDVIGKYHPHGDVAAYETIVRMAQDFSMRYPLVDGQGNFGSVDGDGAAAMRYTEVRLKKL 192
Query: 131 SNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEV 190
S+E+L LD++ +DF NYDG +KEP+VLPT P LLINGS+GIAVGMATNIPPHNL E
Sbjct: 193 SSEMLRGLDEDAVDFAPNYDGTQKEPTVLPTVFPELLINGSAGIAVGMATNIPPHNLRET 252
Query: 191 IDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEE 250
++ L VL NPEC+I+++IK++PAPDFPT GI+YGLS VH+ Y TG+G+ IIRAKTHIEE
Sbjct: 253 VNACLLVLRNPECTIDEIIKVMPAPDFPTGGILYGLSDVHEAYRTGRGKAIIRAKTHIEE 312
Query: 251 FNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRN 310
++ NR +IIIDE+PYQVNK+ LLEKI+QLV EKK++ +S +RDESDK+GMR VIELKR
Sbjct: 313 WDNGNRESIIIDEIPYQVNKRLLLEKIAQLVAEKKIDGMSFVRDESDKNGMRGVIELKRG 372
Query: 311 EIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFEL 370
+VLN LYK TQLQ++FG+N++ALVNGQPK LN+KEIL F+ R+EV+ R T+F
Sbjct: 373 ANANVVLNLLYKNTQLQDSFGINLVALVNGQPKQLNIKEILVEFLSFRREVVTRVTMFRR 432
Query: 371 RKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII---GFN 427
KAR +++EG IAL N+D+FI IIR+++ + A+ +++E W + +++I +
Sbjct: 433 DKARARVYLVEGQAIALANLDDFINIIRTSANAKIAEERLLEREWPAHEAAEMIKRANLD 492
Query: 428 KKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
KK + + L + + Y+LS +QA+ IL+M LQ LT +EQ+KI +Y+ ++ +I
Sbjct: 493 KKFLRPEDEDMTLG-LTDQETYRLSSMQAKNILQMRLQSLTGLEQEKIHAEYKELVDTII 551
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DLTDIL+ +R+ II D L + ++G R+++I+ NA N T+DLI ++MV+T
Sbjct: 552 DLTDILAKPERVTAIIADSLETVAAEFGDE----RKTQIVANAENVKTKDLIPLREMVVT 607
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
L++ GYIKSQ EYRAQKRGG+GK+A K+ D INQLF+A THD +LCF+N GRL+WL
Sbjct: 608 LTDTGYIKSQASIEYRAQKRGGQGKRAAQMKEGDIINQLFVATTHDVLLCFTNKGRLHWL 667
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
VW +P+GS +S+G+PI+NM L + EK+T +LP+S+ D+ K+ Y+FM+T+ G VKKT
Sbjct: 668 NVWDVPEGSSSSKGRPIVNMLELTDDEKVTAVLPISD--EDYAKDLYIFMATADGTVKKT 725
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
+ +F N R++GI A+NL D L+GAA+TDG +D+MLFSD+GK VRF+E+ VRAMGR+A
Sbjct: 726 PIGDFKNQRRAGINAINLLEGDVLVGAAVTDGKHDVMLFSDNGKVVRFSEDEVRAMGRAA 785
Query: 728 RGVIGMRLEKKQKVIALLV-SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKT 786
GV GMRL++ QKVI++LV +++ +VLTATE GYGKR+ + EYT+H RGTKGIISI+T
Sbjct: 786 TGVRGMRLDEGQKVISMLVCGDDEDVTVLTATEFGYGKRSPLAEYTRHGRGTKGIISIQT 845
Query: 787 NKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
+RNGKVV+A LV EI+L+T+ G L+RTRV+EIR +GR+TQGV LI++E +KL G+
Sbjct: 846 TERNGKVVSALLVKENDEIILLTSTGKLVRTRVNEIRVLGRNTQGVTLISMEEGTKLVGL 905
Query: 847 QRLCK 851
+R+ +
Sbjct: 906 ERVTE 910
>gi|330998923|ref|ZP_08322650.1| DNA gyrase, A subunit [Parasutterella excrementihominis YIT 11859]
gi|329576137|gb|EGG57656.1| DNA gyrase, A subunit [Parasutterella excrementihominis YIT 11859]
Length = 955
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/845 (57%), Positives = 650/845 (76%), Gaps = 11/845 (1%)
Query: 11 ILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVV 70
I LE+EM +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAM E+NN+WN K ARVV
Sbjct: 73 ISLEDEMKRSYLDYAMSVIMGRALPDVRDGLKPVHRRVLFAMFELNNMWNTQHKKSARVV 132
Query: 71 GETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKI 130
G+ +GKYHPHGD + Y+ +VRMAQ FS+R LVDGQGNFGS+DGD AAAMRYTE RL K+
Sbjct: 133 GDVIGKYHPHGDAAAYETIVRMAQDFSMRYPLVDGQGNFGSVDGDGAAAMRYTEVRLKKL 192
Query: 131 SNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEV 190
S+E+L LD++ +DF NYDG +KEP+VLPT P LLINGS+GIAVGMATNIPPHNL E
Sbjct: 193 SSEMLRGLDEDAVDFAPNYDGTQKEPTVLPTVFPELLINGSAGIAVGMATNIPPHNLRET 252
Query: 191 IDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEE 250
++ L VL NPEC+I+++IK++PAPDFPT GI+YGLS VH+ Y TG+G+ IIRAKTHIEE
Sbjct: 253 VNACLLVLRNPECTIDEIIKVMPAPDFPTGGILYGLSDVHEAYRTGRGKAIIRAKTHIEE 312
Query: 251 FNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRN 310
++ NR +IIIDE+PYQVNK+ LLEKI+QLV EKK++ +S +RDESDK+GMR VIELKR
Sbjct: 313 WDNGNRESIIIDEIPYQVNKRLLLEKIAQLVAEKKIDGMSFVRDESDKNGMRGVIELKRG 372
Query: 311 EIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFEL 370
+VLN LYK TQLQ++FG+N++ALVNGQPK LN+KEIL F+ R+EV+ R T+F
Sbjct: 373 ANANVVLNLLYKNTQLQDSFGINLVALVNGQPKQLNIKEILVEFLSFRREVVTRVTMFRR 432
Query: 371 RKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII---GFN 427
KAR +++EG IAL N+D+FI IIR+++ + A+ +++E W + +++I +
Sbjct: 433 DKARARVYLVEGQAIALANLDDFINIIRTSANAKIAEERLLEREWPAHEAAEMIKRANLD 492
Query: 428 KKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
KK + + L + + Y+LS +QA+ IL+M LQ LT +EQ+KI +Y+ ++ +I
Sbjct: 493 KKFLRPEDEDMTLG-LTDQETYRLSSMQAKNILQMRLQSLTGLEQEKIHAEYKELVDTII 551
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DLTDIL+ +R+ II D L + ++G R+++I+ NA N T+DLI ++MV+T
Sbjct: 552 DLTDILAKPERVTAIIADSLETVAAEFGDE----RKTQIVANAENVKTKDLIPLREMVVT 607
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
L++ GYIKSQ EYRAQKRGG+GK+A K+ D INQLF+A THD +LCF+N GRL+WL
Sbjct: 608 LTDTGYIKSQASIEYRAQKRGGQGKRAAQMKEGDIINQLFVATTHDVLLCFTNKGRLHWL 667
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
VW +P+GS +S+G+PI+NM L + EK+T +LP+S+ D+ K+ Y+FM+T+ G VKKT
Sbjct: 668 NVWDVPEGSSSSKGRPIVNMLELTDDEKVTAVLPISD--EDYAKDLYIFMATADGTVKKT 725
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
+ +F N R++GI A+NL D L+GAA+TDG +D+MLFSD+GK VRF+E+ VRAMGR+A
Sbjct: 726 PIGDFKNQRRAGINAINLLEGDVLVGAAVTDGKHDVMLFSDNGKVVRFSEDEVRAMGRAA 785
Query: 728 RGVIGMRLEKKQKVIALLV-SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKT 786
GV GMRL++ QKVI++LV +++ +VLTATE GYGKR+ + EYT+H RGTKGIISI+T
Sbjct: 786 TGVRGMRLDEGQKVISMLVCGDDEDVTVLTATEFGYGKRSPLAEYTRHGRGTKGIISIQT 845
Query: 787 NKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
+RNGKVV+A LV EI+L+T+ G L+RTRV+EIR +GR+TQGV LI++E +KL G+
Sbjct: 846 TERNGKVVSALLVKENDEIILLTSTGKLVRTRVNEIRVLGRNTQGVTLISMEEGTKLVGL 905
Query: 847 QRLCK 851
+R+ +
Sbjct: 906 ERVTE 910
>gi|53804242|ref|YP_113878.1| DNA gyrase subunit A [Methylococcus capsulatus str. Bath]
gi|53758003|gb|AAU92294.1| DNA gyrase, A subunit [Methylococcus capsulatus str. Bath]
Length = 860
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/854 (54%), Positives = 641/854 (75%), Gaps = 15/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE+I + LE+EM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+ N WN
Sbjct: 1 MTAFAKEIIPVNLEDEMKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGD AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLIDGQGNFGSVDGDPPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I+++LL DLDKET+DF+ NYD E+EPSVLPTRIPNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMARIAHDLLADLDKETVDFVPNYDDSEREPSVLPTRIPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L ++ NPE + DL+ +P PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLREVVDACLALIENPEAGVQDLMAFVPGPDFPTAGIINGAAGIREAYLTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ E R +II++ELPYQVNK LLEKI++LVKE KLE IS LRDESDK G
Sbjct: 241 YLRARCQF-EGEEGGRQSIIVNELPYQVNKARLLEKIAELVKEGKLEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL+R E PE+VLN LY+QTQ+Q+ FG+NM+AL+NG+P+L+NL++++ FI HR+E
Sbjct: 300 MRMVIELRRGEAPEVVLNNLYQQTQMQSVFGINMVALLNGRPRLMNLRDLIAAFIDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+ ELRKARE AH+LEGL +AL NID I++I+S+ +P EAK +++ W V
Sbjct: 360 VVTRRTLHELRKARERAHVLEGLAVALANIDEVIELIKSSPSPAEAKERLVSRAWRPGVV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++++ + + S+ ++ + Y+LS IQAQ IL + L RLT +EQ KII +
Sbjct: 420 TELL--ERADAAEASRPRDLDPVYGLREGAYRLSPIQAQAILDLRLHRLTGLEQDKIIAE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y +++++ DL DIL+ R++++I DEL I+ ++G + RR+EII + ++ S EDL
Sbjct: 478 YRALLEQIADLLDILAKDTRLMQVIRDELVAIREQFG----DPRRTEIIADRLDLSAEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +DMV+T+S+ GY+K+QP+S+YRAQ+RGGRGK+A TK+ED+I +L +ANTHD ILCF
Sbjct: 534 ITEEDMVVTVSHEGYVKAQPLSDYRAQRRGGRGKQAAATKEEDYIEKLVVANTHDTILCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ G++YWLKV+++P SR +RG+P +N+ L+ E+I ILP+ R+F + +++FM+
Sbjct: 594 SSSGKVYWLKVYELPVASRTARGRPFVNLLPLEEGERINAILPI----REFDEAHFIFMA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKK LS F PR SG IA+ L ++D L+ A+T+G D+MLFS GK V F+E
Sbjct: 650 TASGTVKKVALSEFERPRPSGKIAIELRDDDRLVDVAITNGEQDVMLFSSDGKVVCFHET 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VRAMGR+A GV GM L++ +KVIAL++++ + +VL TENGYGKRT ++E+ +H RG
Sbjct: 710 DVRAMGRTAAGVRGMTLQEGRKVIALIIAS--EGTVLNITENGYGKRTRLEEFPRHRRGG 767
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I+I+T+ RNG VV A LV EIMLIT G L+RTRVSEI + R+TQGV +I +
Sbjct: 768 QGVIAIQTSARNGAVVGAALVEDEDEIMLITDAGTLVRTRVSEISVLSRNTQGVTVIRLN 827
Query: 839 NKSKLCGVQRLCKI 852
K+ G+ R+ +
Sbjct: 828 PGEKVVGMDRIGSL 841
>gi|333983581|ref|YP_004512791.1| DNA gyrase subunit A [Methylomonas methanica MC09]
gi|333807622|gb|AEG00292.1| DNA gyrase, A subunit [Methylomonas methanica MC09]
Length = 868
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/849 (55%), Positives = 643/849 (75%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE+I + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+E+ N WN
Sbjct: 1 MSDFAKEIIPVNLEDEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQPFSLRYMLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+DF+SNYD E EP+V+PTRIP LLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDFVSNYDESESEPTVMPTRIPTLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++ L ++ N + +I +L++I+P PDFPTAGII G S +++ Y TG+GR+
Sbjct: 181 NIPPHNLDEIVSACLALIENADLTIPELMQIVPGPDFPTAGIINGASGIYEAYTTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA++H E+ R AII ELPYQVNK LLEKI++LVKE KLE IS LRDESDK G
Sbjct: 241 YIRARSHFEDIGDSGRQAIITTELPYQVNKARLLEKIAELVKEGKLEGISGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL+R E+P++VLN LYKQTQ+Q FG+NM+AL++G+P +NLKEIL FI HR+E
Sbjct: 301 MRMVIELRRGEVPDVVLNNLYKQTQMQTVFGINMVALLDGRPHCMNLKEILAAFIDHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
++ RRTI+ LRKARE AHILEGL +AL NID I++I+++ PQEAK ++ TWN V
Sbjct: 361 IVTRRTIYNLRKARERAHILEGLAVALANIDEMIELIKTSPNPQEAKQGLLAKTWNPGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + L + Y+LS+ QAQ IL + L RLT +EQ+KI+N+Y+
Sbjct: 421 ASLLDRADADRSRPEHLTLEFGLVDG-FYRLSEEQAQAILDLRLHRLTGLEQEKIVNEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + + IL + R++E+I +EL +K++Y + RR+EII + N S EDLI
Sbjct: 480 QLLELIDEYLHILGSDVRLMEVIREELEEVKSQYA----DARRTEIIQDYSNLSAEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+T+S+ GY+K+QP+++Y+AQ+RGGRGK A TK+ D+I++L IANTHD ILCFS+
Sbjct: 536 EEDMVVTMSHEGYVKTQPLTDYKAQRRGGRGKSATATKENDFIDKLIIANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+++P SR SRGKP +N+ L+ EKI +L + R++ + YVFM+T+
Sbjct: 596 RGKVYWLKVYELPVASRASRGKPFVNLLPLEEGEKINAMLSV----REYSADKYVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+ G IA++L + D L+G ALTDG ++MLF+ GKAV FNE V
Sbjct: 652 SGTVKKTPLTEFAYQLAKGKIAIDLRDNDMLVGVALTDGQQNVMLFNSDGKAVCFNETDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV GMRL++ QK+I+L++S + +VL TENGYGKRT I+E+T+H RG +G
Sbjct: 712 RPMGRTAAGVRGMRLQEGQKIISLIIST--EGTVLNITENGYGKRTRIEEFTQHKRGGQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+T++RNG VV A LVN EIMLIT G L+RTRV+EI +GR+TQGV +I ++
Sbjct: 770 LIAIQTSERNGAVVGAVLVNDTDEIMLITNAGTLVRTRVNEISVVGRNTQGVTVIRLDKG 829
Query: 841 SKLCGVQRL 849
K+ GV R+
Sbjct: 830 EKVVGVDRI 838
>gi|345863459|ref|ZP_08815670.1| DNA gyrase subunit A [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345878474|ref|ZP_08830186.1| adenylosuccinate lyase [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344224505|gb|EGV50896.1| adenylosuccinate lyase [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|345125537|gb|EGW55406.1| DNA gyrase subunit A [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 861
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/852 (55%), Positives = 644/852 (75%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++FAKEV+ + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSEFAKEVLPVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ +L DLDKET+DF+ NYD E EP+VLP RIPNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMAKIAHSMLDDLDKETVDFVPNYDNSEHEPAVLPARIPNLLINGSTGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVID + ++ N S+++L++ +P PDFPTA II G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDACIALVDNEAISMSELMQYLPGPDFPTAAIINGAHGIKEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+T IE + NR II+ ELPYQVNK LLEKI++LVKEKK+E I+ LRDESDK G
Sbjct: 241 YMRARTEIESLDSSNRQRIIVHELPYQVNKARLLEKIAELVKEKKIEGITELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL+R E+ E+VLN L++QT +Q+ FG+NM+ALV+GQP+LLNLK++L YFI HR+E
Sbjct: 301 MRMVIELRRGEVAEVVLNNLFQQTAMQSVFGINMVALVDGQPRLLNLKQMLEYFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AH+LEGL +AL NID I +I++ S+P EAK ++ W V
Sbjct: 361 VVTRRTLFELRKARDRAHVLEGLAVALANIDEVIALIKAASSPAEAKLALLARHWQSGTV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++ G + ++ +S+ Y+L++IQAQ IL + L RLT +EQ KII
Sbjct: 421 EAMLQRAGADSTRPEGLALEFGLSE----QGYRLTEIQAQAILDLRLHRLTGLEQDKIIK 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+YE +++K+ +L DILS+S R++E+I DEL I+ +Y + RR++II + ++ + ED
Sbjct: 477 EYEELLEKIANLLDILSSSFRLMEVIRDELLAIREQY----NDPRRTQIIQDRLDLTLED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY K+QPIS Y+AQ+RGG+GK A TKDED++++LF+A+THD ILC
Sbjct: 533 LITEEDVVVTLSHKGYAKAQPISVYQAQRRGGKGKSATATKDEDFVDKLFVASTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS++G++YWLKV+++PQ R +RGKP++N+ L +E+I ILP+ R+FP++ YVFM
Sbjct: 593 FSSHGKVYWLKVYELPQAGRGARGKPMVNLLPLGEEERINAILPV----REFPEDRYVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T GIVKKT L FS PR SGIIAV+L +D LIG +TDG +MLF+ SGKAVRF+E
Sbjct: 649 ATRSGIVKKTPLEAFSRPRASGIIAVDLRPDDRLIGVEITDGDQHVMLFASSGKAVRFHE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR MGR+A GV G++ +Q++++L+V + + +LT TENG+GKRT + +Y H RG
Sbjct: 709 SHVRPMGRTACGVRGIKFAPEQQLVSLIVGD--QGDILTVTENGFGKRTPVAQYPVHGRG 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
G+IS++T++RNG VV A V EIM+IT GG L+RT V ++ +MGR+TQGV +I +
Sbjct: 767 GMGVISVQTSERNGPVVGAVQVQEDDEIMMITNGGTLVRTPVRDVSQMGRNTQGVTMIRL 826
Query: 838 ENKSKLCGVQRL 849
+L G++R+
Sbjct: 827 GKAERLIGIERI 838
>gi|237808193|ref|YP_002892633.1| DNA gyrase subunit A [Tolumonas auensis DSM 9187]
gi|237500454|gb|ACQ93047.1| DNA gyrase, A subunit [Tolumonas auensis DSM 9187]
Length = 862
Score = 998 bits (2581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/854 (56%), Positives = 643/854 (75%), Gaps = 16/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+I I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MSDLAKEIIPINIEDELRNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDRIAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+DG L ++ N E +I++LI++IP PDFPT GII G S + D Y TG+G++
Sbjct: 181 NIPPHNLTEVVDGCLALMENSELTIDELIQLIPGPDFPTGGIINGRSGILDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+T IE + + +II+ ELPY VNK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 YVRARTEIETDEKNGKESIIVTELPYTVNKARLVEKIAELVKDKKIEGITALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL+R E+ E++LN LY TQ+QN FG+NM+ALVNGQPK LNLKEIL FI HR+E
Sbjct: 301 MRVVIELRRGELTEVMLNNLYTHTQMQNVFGINMVALVNGQPKTLNLKEILAAFIDHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILEGL IAL NID I++I+++S+P EAK ++ W L V
Sbjct: 361 VVTRRTVFELRKARERAHILEGLAIALANIDPVIELIKNSSSPAEAKQGLVARGWALGAV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++++ G + + I +D Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 421 AEMLERAGGDAARPEWLEPEFGI----RDDHYFLTEQQAQAILDLRLHKLTGLEHEKILD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y ++ ++ +L IL++ +R++E+I +EL +K+++G RR+EI +I + ED
Sbjct: 477 EYRELLGEIAELLRILASPERLMEVIREELEFVKSQFGDK----RRTEIQAASIEINMED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A KDED++ QL +ANTHD ILC
Sbjct: 533 LITPEDVVVTLSHEGYVKYQPLSDYEAQRRGGRGKAAAKVKDEDFVEQLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G++YWLKV+Q+P+ SR +RG+PIIN+ L E+IT ILP+ + + + YVF
Sbjct: 593 FSTQGKVYWLKVYQLPEASRTARGRPIINLLPLDENERITAILPV----KSYDDDKYVFF 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT LS +S P SGI A+NL+ D LIG A+TDG+ +IMLFSD+GK VRFNE
Sbjct: 649 ATGDGTVKKTELSAYSRPLSSGIRAINLNEGDSLIGVAITDGNSEIMLFSDAGKVVRFNE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR+MGR+A GV GM+L + KV++L+V N ++LTATENGYGKRT + EY +R
Sbjct: 709 SDVRSMGRTATGVRGMKLGETDKVVSLIVPQN-GGAILTATENGYGKRTDLAEYPVKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T G+ISI+ +RNGKVV A V+ EIMLIT G L+RTRVSE+ +GR+T GV LI
Sbjct: 768 TLGVISIQVTERNGKVVGAIQVDESDEIMLITNAGTLVRTRVSEVGLIGRNTAGVRLIRT 827
Query: 838 ENKSKLCGVQRLCK 851
KL ++R+ +
Sbjct: 828 AEDEKLVSLERVAE 841
>gi|220934707|ref|YP_002513606.1| DNA gyrase subunit A [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219996017|gb|ACL72619.1| DNA gyrase, A subunit [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 864
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/852 (54%), Positives = 644/852 (75%), Gaps = 11/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKEV+ + LE+EM +SYLDYAMSVI+GRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MAEFAKEVLHVNLEDEMRQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLYAMQELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K++++LL D+DKET+DF+ NYDG E+EPSV PTR+PNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMAKLAHQLLADIDKETVDFVDNYDGSEREPSVFPTRLPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EV+D + ++ +P I L++ +P PDFPTA +I G + +H+ Y+TG+GR+
Sbjct: 181 NIPPHNMREVVDACVALIDDPSIGIPQLMEHLPGPDFPTAAVINGATGIHEAYHTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA++H+E R ++++ ELPYQVNK LLEKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 YLRARSHVETDEGSGRQSLVVTELPYQVNKARLLEKIAELVKEKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+PE++LN LY+ TQ+QN FG+NM+ALV+GQP+LL+LK++L F+ HR+E
Sbjct: 301 MRMVIELKRGEVPEVILNNLYQHTQMQNVFGINMVALVDGQPRLLDLKQVLEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI++LRKARE AH+LEGL +AL NID I +I+++++P EAK ++ W V
Sbjct: 361 VVTRRTIYDLRKARERAHVLEGLAVALANIDEVIALIKASASPAEAKAGLMGRAWKSGVV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++ + ++ + + D Y LSD QAQ IL + L RLT +EQ+K++++Y+
Sbjct: 421 DEMLARAGAATSRPEDLDAAFGI-HADGYYLSDAQAQAILDLRLHRLTGLEQEKVVSEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++K+ DL DIL + R++ +I DEL ++ ++G RR+EII + ++ + EDLI
Sbjct: 480 ELLEKIDDLLDILGSPDRLMRVIRDELLEMREQFGDE----RRTEIIESRLDLTLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY K QP+S YRAQKRGGRGK A KDED++++L + +THD ILCFS+
Sbjct: 536 EEDVVVTLSHAGYAKYQPVSAYRAQKRGGRGKSATSFKDEDFVDRLVVCSTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ YWLKV+++PQGSR +RGKPI+N+ L+ E+I ILP+ R++ ++ YVFMSTS
Sbjct: 596 RGKAYWLKVYELPQGSRAARGKPIVNLLPLEEGERINAILPV----REYLEDLYVFMSTS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +FS PR +GIIAV+L + D L+ A+TDGS D+ML + +GKA+RF+E V
Sbjct: 652 SGTVKKTPLVDFSRPRSNGIIAVDLRDGDQLVDVAITDGSRDVMLLTSAGKAIRFSEEQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+RL + Q+VI+L++ + + +VL ATENGYGKRT ++ H RG +G
Sbjct: 712 RPMGRTACGVRGVRLAEDQRVISLIIVD--EGTVLIATENGYGKRTPPDDFPVHGRGGQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+T RNG VV ATLV E+MLIT GG L+RT V++I +GR+TQGV LI + ++
Sbjct: 770 VIAIQTGGRNGAVVGATLVADEDEVMLITDGGTLVRTPVADISVLGRNTQGVRLIRLTDQ 829
Query: 841 SKLCGVQRLCKI 852
L + R+ +
Sbjct: 830 EHLVELARVAGL 841
>gi|375108460|ref|ZP_09754717.1| DNA gyrase subunit A [Alishewanella jeotgali KCTC 22429]
gi|374571562|gb|EHR42688.1| DNA gyrase subunit A [Alishewanella jeotgali KCTC 22429]
Length = 876
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/852 (55%), Positives = 639/852 (75%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLAREIVPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMKELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL DLDKET+DF+ NYDG E+ P+VLPT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIAHELLADLDKETVDFVPNYDGTEQIPAVLPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E+IDG L ++ NP+ +++L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEIIDGCLALIANPDIELHELMQHIPGPDFPTAAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKT +E + R AII++E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRAKTTLETDEKTGREAIIVNEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIELKR E +++LN+LY TQ+Q FG+NM+AL NGQPKLL+LKE+L YFILHR+E
Sbjct: 301 MRIVIELKRGESSDVMLNQLYANTQMQTVFGINMVALANGQPKLLSLKEMLEYFILHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKARE AHILEGL +AL NID I++I+++++P EAK ++E W L V
Sbjct: 361 VVTRRTVFDLRKARERAHILEGLAVALANIDAIIELIKTSASPAEAKAGLVERGWELGGV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ ++ + +++ Y L++ QAQ IL + L +LT +E +KI+ +Y+
Sbjct: 421 SAMLERAGQDAARPEWLEEHFGIRDG-QYFLTEQQAQAILDLRLHKLTGLEHEKILAEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL++ +R++E+I +EL K +YG + RR+EI N ++ + EDLI
Sbjct: 480 ELLDLIAELLHILASPERLMEVICEELAAAKAQYG----DARRTEIQDNMLDINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+LGY K QP+S+Y AQ+RGGRGK A KDED++++L +A+THD ILCFSN
Sbjct: 536 EEDVVVTLSHLGYAKYQPLSDYEAQRRGGRGKAATTVKDEDFVDKLLVASTHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+I ILP+ R++ + YVFM+T+
Sbjct: 596 RGRLYWLKVYQLPLASRTARGKPIVNILPLEEGERINAILPV----REYEEGKYVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ +S PR +GIIAVNL+ D LI +TDGS +IMLFSD GK VRF E +V
Sbjct: 652 NGTVKKTALTEYSRPRSNGIIAVNLNEGDKLIDVGITDGSNEIMLFSDDGKVVRFAEEAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR A GV G+RL + V++L++ + ++LT TENGYGKRT + EY +R T+G
Sbjct: 712 RPMGRGATGVRGIRLREGGSVVSLIIPQGEG-AILTVTENGYGKRTALTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V EIM+I+ G L+RTRV E+ ++GR+TQGVILI +
Sbjct: 771 VVSIKVSERNGLVVGAVQVAESDEIMMISDKGTLVRTRVREVSEVGRNTQGVILIRTQEG 830
Query: 841 SKLCGVQRLCKI 852
K+ GV+R+ +I
Sbjct: 831 EKVSGVERIAEI 842
>gi|381161020|ref|ZP_09870251.1| DNA gyrase, A subunit [Thiorhodovibrio sp. 970]
gi|380877256|gb|EIC19349.1| DNA gyrase, A subunit [Thiorhodovibrio sp. 970]
Length = 890
Score = 996 bits (2575), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/895 (51%), Positives = 660/895 (73%), Gaps = 34/895 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKEV+++ LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MPDFAKEVLTVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYMLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ LL DLDKET+DFI NYD E EP+VLP R PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIAHSLLDDLDKETVDFIPNYDESEYEPTVLPARFPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E+ID L ++ P ++++LI ++P PDFPTA II G+ + + Y TG+GR+
Sbjct: 181 NIPPHNLGEIIDACLKLIDEPLTTLDELIDLVPGPDFPTAAIINGVRGIREAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA++ +E R R AI++ ELPYQVNK +LEK+++LVKEKKLE I+ LRDESDK G
Sbjct: 241 QLRARSEVETLKRSGREAIVVTELPYQVNKARMLEKMAELVKEKKLEGIAELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIE+KR+ P++VLN LY+ T +Q FG+NM+ LV+GQP+LLNLK++L YF+ HR++
Sbjct: 301 MRMVIEIKRDHYPDVVLNNLYQHTNMQTVFGINMVGLVDGQPRLLNLKQLLEYFLRHRRD 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKAR+ AH+LEG T+AL NID I +I+++++P +A+ ++ TW V
Sbjct: 361 VVTRRTLYELRKARDRAHLLEGFTVALANIDEVIALIKASASPADAREGLMARTWAPGQV 420
Query: 421 SKIIGFNKKNYNTISKINN--------ISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+ ++ ++I + I + + Y+LS+ QA+ IL + LQRLT +EQ
Sbjct: 421 TGMLERAGAAPSSIESRPDELDPSFGLIGEGDQSGRYRLSERQARAILDLQLQRLTGLEQ 480
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
KII +Y +++K+ +L +IL N +R++++I DEL I+++Y + RR+EI+ + +
Sbjct: 481 DKIIKEYGEILQKISELLEILRNPERLMQVIRDELTAIRDQYA----DARRTEIVTDQTD 536
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+ DLIA +DMV+TLS+ GYIK+QP+SEY+AQ+RGG+G+ A TKDED+I++LF+AN+H
Sbjct: 537 LTLLDLIAPEDMVVTLSHAGYIKAQPLSEYQAQRRGGKGRIAATTKDEDFIDRLFVANSH 596
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D +LCFS++G++YWLKV+++PQ R +RG+P++N+ SL+ E+I LP++ ++ ++
Sbjct: 597 DTVLCFSSFGKVYWLKVYELPQSGRGARGRPVVNLLSLEQGERINATLPVA----EYDQD 652
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++FM+TS G VKKT +S+FS P G+IA++L +++LIG A+TDG D+MLF+ +GKA
Sbjct: 653 RFIFMATSKGTVKKTPISDFSRPLSRGLIAIDLHEDEYLIGVAVTDGHQDMMLFTSAGKA 712
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRFNE +VR+MGR+A GV G+ LE+ Q+VI+L+++ + +VLT TE GYGKRT ++E+
Sbjct: 713 VRFNEEAVRSMGRTAHGVRGVTLEEGQRVISLVIA--EPGAVLTVTEKGYGKRTPVEEFP 770
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
RG KG+I+I+T++RNG+ ++A LV EIMLIT GG L+RT V I +GRSTQGV
Sbjct: 771 TKGRGGKGVIAIRTSERNGEQISAVLVRPGDEIMLITDGGTLVRTAVDGISLLGRSTQGV 830
Query: 833 ILITVENKSKLCGVQRLCKITMIKKYI-----------PVI-----TIDGPTASG 871
LI + +L G++R+ + P+I IDGP A G
Sbjct: 831 RLINLGEGQRLAGIERIVALNGDGDEGEGGGNGEDGDPPMIDPDSEQIDGPDAGG 885
>gi|393761929|ref|ZP_10350560.1| DNA gyrase subunit A [Alishewanella agri BL06]
gi|392607142|gb|EIW90022.1| DNA gyrase subunit A [Alishewanella agri BL06]
Length = 876
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/852 (55%), Positives = 638/852 (74%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLAREIVPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMKELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL DLDKET+DF+ NYDG E+ P+VLPT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIAHELLADLDKETVDFVPNYDGTEQIPAVLPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E+IDG L ++ NP+ +++L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEIIDGCLALIANPDIELHELMQYIPGPDFPTAAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKT +E + R AII++E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRAKTTLETDEKTGREAIIVNEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIELKR E +++LN+LY TQ+Q FG+NM+AL NGQPKLL+LKE+L YFILHR+E
Sbjct: 301 MRIVIELKRGESSDVMLNQLYANTQMQTVFGINMVALANGQPKLLSLKEMLEYFILHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+++LRKARE AHILEGL +AL NID I++I+++++P EAK ++E W L V
Sbjct: 361 VVTRRTVYDLRKARERAHILEGLAVALANIDAIIELIKTSASPAEAKAGLVERGWELGGV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ ++ + +++ Y L++ QAQ IL + L +LT +E +KI+ +Y+
Sbjct: 421 SAMLERAGQDAARPEWLEEHFGIRDG-QYFLTEQQAQAILDLRLHKLTGLEHEKILAEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL++ +R++E+I +EL K +YG + RR+EI N ++ + EDLI
Sbjct: 480 ELLDLIAELLHILASPERLMEVICEELAAAKAQYG----DARRTEIQDNMLDINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+LGY K QP+S+Y AQ+RGGRGK A KDED++++L +A+THD ILCFSN
Sbjct: 536 EEDVVVTLSHLGYAKYQPLSDYEAQRRGGRGKAATTVKDEDFVDKLLVASTHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+I ILP+ R++ + YVFM+T+
Sbjct: 596 RGRLYWLKVYQLPLASRTARGKPIVNILPLEEGERINAILPV----REYEEGKYVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ +S PR +GIIAVNL+ D LI +TDGS +IMLFSD GK VRF E+ V
Sbjct: 652 NGTVKKTALTEYSRPRSNGIIAVNLNEGDKLIDVGITDGSNEIMLFSDDGKVVRFAEDEV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR A GV G+RL V++L++ + ++LT TENGYGKRT + EY +R T+G
Sbjct: 712 RPMGRGATGVRGIRLRDGGSVVSLIIPQGEG-AILTVTENGYGKRTALTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V EIM+I+ G L+RTRV E+ ++GR+TQGVILI +
Sbjct: 771 VVSIKVSERNGLVVGAVQVAESDEIMMISDKGTLVRTRVREVSEVGRNTQGVILIRTQEG 830
Query: 841 SKLCGVQRLCKI 852
K+ GV+R+ +I
Sbjct: 831 EKVSGVERIAEI 842
>gi|383935681|ref|ZP_09989115.1| DNA gyrase subunit A [Rheinheimera nanhaiensis E407-8]
gi|383703250|dbj|GAB59206.1| DNA gyrase subunit A [Rheinheimera nanhaiensis E407-8]
Length = 872
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/852 (55%), Positives = 650/852 (76%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLAREIVPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMKELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL DLDKET+D++ NYDG E+ P+V+PT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIAHELLADLDKETVDYVPNYDGTEQIPAVMPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++ NP+ +++L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVIDGCLALIANPDIELHELMQYIPGPDFPTAAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKT IE + R AII++E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRAKTEIETDEKTGREAIIVNEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIELKR E +++LN+LY TQ+Q FG+NM+AL GQPKLL+LKE+L F+LHR+E
Sbjct: 301 MRIVIELKRGESSDVMLNQLYANTQMQTVFGINMVALDQGQPKLLSLKEMLQCFVLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+++LRKAR+ AHILEGL IAL NID+ I++I+++ +P EAK ++++ W L DV
Sbjct: 361 VVTRRTVYDLRKARDRAHILEGLAIALANIDDIIELIKTSPSPAEAKLRLVDRGWQLGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ ++ + +++ Y L++ QAQ IL + L +LT +E +KI+++Y+
Sbjct: 421 SAMLERAGQDAARPEWLEAHFGIRDGK-YFLTEQQAQAILDLRLHKLTGLEHEKILDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + +L IL++ +R++E+I +EL IK +YG + RR++I N ++ + EDLI
Sbjct: 480 QLLELIAELLHILASPERLMEVICEELEAIKTQYG----DARRTDIQDNMLDINMEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+LGY K QP+S+Y AQ+RGG+GK A KDED++++L +A+THD ILCFSN
Sbjct: 536 EEDVVVTLSHLGYAKYQPLSDYEAQRRGGKGKAATTVKDEDFVDKLLVASTHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P SR +RGKPI+N+ L+ E+I ILP+ R++ +N YVFM+T+
Sbjct: 596 RGRLYWMKVYQLPLASRTARGKPIVNLLPLEEGERINAILPV----REYEENKYVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ +S PR +GIIAVNL++ D LIG +TDG+ +IMLFSD GK VRF E+ V
Sbjct: 652 NGTVKKTSLTEYSRPRSNGIIAVNLNDGDRLIGVGITDGNSEIMLFSDDGKVVRFAEDQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G++L + V++L++ N +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGIKLREGGSVVSLIIPNGSG-PILTVTENGYGKRTALQEYPAKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A VN EIM+I+ G L+RTRV+E+ ++GR+TQGVILI +
Sbjct: 771 VVSIKVSERNGLVVGAVQVNELDEIMMISNKGTLVRTRVNEVSEVGRNTQGVILIRTADN 830
Query: 841 SKLCGVQRLCKI 852
K+ GV+++ +I
Sbjct: 831 EKVVGVEKIDEI 842
>gi|397170586|ref|ZP_10493999.1| DNA gyrase subunit A [Alishewanella aestuarii B11]
gi|396087829|gb|EJI85426.1| DNA gyrase subunit A [Alishewanella aestuarii B11]
Length = 876
Score = 991 bits (2563), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/852 (55%), Positives = 637/852 (74%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLAREIVPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMKELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL DLDKET+DF+ NYDG E+ P+VLPT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIAHELLADLDKETVDFVPNYDGTEQIPAVLPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E+IDG L ++ NP+ +++L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEIIDGCLALIANPDIELHELMQHIPGPDFPTAAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKT +E + R AII++E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRAKTTLETDEKTGREAIIVNEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIELKR E +++LN+LY TQ+Q FG+NM+AL +GQPKLL LK +L YFILHR+E
Sbjct: 301 MRIVIELKRGESSDVMLNQLYANTQMQTVFGINMVALADGQPKLLGLKAMLEYFILHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+++LRKARE AHILEGL +AL NID I++I+++++P EAK ++E W L V
Sbjct: 361 VVTRRTVYDLRKARERAHILEGLAVALANIDAIIELIKTSASPAEAKAGLVERGWELGGV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ ++ + +++ Y L++ QAQ IL + L +LT +E +KI+ +Y+
Sbjct: 421 SAMLERAGQDAARPEWLEAHFGIRDG-QYFLTEQQAQAILDLRLHKLTGLEHEKILAEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L ILS+ +R++E+I +EL K +YG + RR+EI N ++ + EDLI
Sbjct: 480 ELLDLIAELLHILSSPERLMEVICEELAAAKAQYG----DARRTEIQDNMLDINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+LGY K QP+++Y AQ+RGGRGK A KDED++++L +A+THD ILCFSN
Sbjct: 536 EEDVVVTLSHLGYAKYQPLTDYEAQRRGGRGKAATTVKDEDFVDKLLVASTHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+I ILP+ R++ + YVFM+T+
Sbjct: 596 RGRLYWLKVYQLPLASRTARGKPIVNILPLEEGERINAILPV----REYEEGKYVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ +S PR +GIIAVNL+ D LI +TDGS +IMLFSD GK VRF E++V
Sbjct: 652 NGTVKKTALTEYSRPRSNGIIAVNLNEGDKLIDVGITDGSNEIMLFSDDGKVVRFAEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR A GV G+RL V++L++ + ++LT TENGYGKRT + EY +R T+G
Sbjct: 712 RPMGRGATGVRGIRLRDGGSVVSLIIPQGEG-AILTVTENGYGKRTALTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V EIM+I+ G L+RTRV E+ ++GR+TQGVILI +
Sbjct: 771 VVSIKVSERNGLVVGAVQVAESDEIMMISDKGTLVRTRVREVSEVGRNTQGVILIRTQEG 830
Query: 841 SKLCGVQRLCKI 852
K+ GV+R+ +I
Sbjct: 831 EKVSGVERIAEI 842
>gi|54294303|ref|YP_126718.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
pneumophila str. Lens]
gi|53754135|emb|CAH15608.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
pneumophila str. Lens]
Length = 863
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/852 (55%), Positives = 636/852 (74%), Gaps = 9/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MVYLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYMLIDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ LL DLDKET+DF NYD E P VLP+RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKVAHALLADLDKETVDFSPNYDETEFAPVVLPSRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ + ++ P+ S+ DL++IIP PDFPTA II G + + +GY TGKGRV
Sbjct: 181 NIPPHNLTEVINACIALVDEPDTSLEDLMEIIPGPDFPTAAIINGRAGIIEGYRTGKGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA+T IE R +III ELPYQVNK L+E+I++LV++KK+E IS LRDESDK G
Sbjct: 241 VIRARTEIETDESSGRQSIIIQELPYQVNKARLIERIAELVRDKKIEGISGLRDESDKQG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+ ++VLN L+ TQ+QN FG+NM+ALV+GQP+ LNLK+IL YFI HR+E
Sbjct: 301 MRVVIELKRNEVADVVLNNLFAHTQMQNVFGINMVALVDGQPRTLNLKQILEYFIKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR AH+LEGL IAL NID I +I+ +STPQ+AK+ ++ W V
Sbjct: 361 VVTRRTIFELKKARNRAHLLEGLGIALANIDEMIALIKQSSTPQDAKSALLSKIWQPGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ N + + L N YKLS+ QAQ IL++ L RLT +EQ KIIN++E
Sbjct: 421 KAMLEKAGSNASRPDDLTEEYGLHENG-YKLSEAQAQAILELRLHRLTALEQDKIINEFE 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L DIL++ +R++++I DEL IK+++G RR+EI + + + EDLI
Sbjct: 480 ELLNLIKELLDILASPERLMQVIRDELIEIKSQFGDE----RRTEITASQEDLTIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI+ Y+AQ+RGG+GK A KDED++ +L IA+THD +LCFSN
Sbjct: 536 EEDVVVTLSHQGYVKYQPITAYQAQRRGGKGKSATHVKDEDFVERLVIASTHDTLLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+LYWLK +Q+PQ SR SRG+PIIN+ L E+I +LP+ R++ +YVFM+T
Sbjct: 596 HGKLYWLKAYQLPQASRASRGRPIINILPLAEGEEINAMLPV----REYKDGSYVFMATK 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKK L+ FS PR +GIIAV+L +D L+G +TDG+ DIMLF+D+GK +RF+E+ V
Sbjct: 652 KGTVKKVPLNAFSRPRSNGIIAVDLEEDDSLVGVDITDGARDIMLFTDAGKVIRFDESKV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+R+EK Q V +L+V + ++LTATENGYGKRT I EY RG +G
Sbjct: 712 RPMGRTARGVRGIRVEKDQAVKSLVVVDPSGGTILTATENGYGKRTHIDEYRVSGRGGQG 771
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI+ +RNGKVV + V E MLIT G L+R +V+E+ +GR+TQGV LI V +
Sbjct: 772 VISIQVTERNGKVVRSLQVTDNDEAMLITDKGTLVRFKVNELSVIGRNTQGVRLINVSSG 831
Query: 841 SKLCGVQRLCKI 852
+ G+Q++ +
Sbjct: 832 EAVVGMQKIVDL 843
>gi|54297327|ref|YP_123696.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
pneumophila str. Paris]
gi|397667035|ref|YP_006508572.1| DNA gyrase subunit A [Legionella pneumophila subsp. pneumophila]
gi|53751112|emb|CAH12523.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
pneumophila str. Paris]
gi|395130446|emb|CCD08686.1| DNA gyrase (type II topoisomerase), subunit A [Legionella
pneumophila subsp. pneumophila]
Length = 863
Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/852 (55%), Positives = 635/852 (74%), Gaps = 9/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MVYLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYLLIDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ LL DLDKET+DF NYD E P VLP+RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKVAHALLADLDKETVDFSPNYDETEFAPVVLPSRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ + ++ P+ S+ DL++IIP PDFPTA II G + + +GY TGKGRV
Sbjct: 181 NIPPHNLTEVINACIALVDEPDTSLEDLMEIIPGPDFPTAAIINGRAGIIEGYRTGKGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA+T IE R +III ELPYQVNK L+E+I++LV++KK+E IS LRDESDK G
Sbjct: 241 VIRARTEIETDESSGRQSIIIQELPYQVNKARLIERIAELVRDKKVEGISGLRDESDKQG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+ ++VLN L+ TQ+QN FG+NM+ALV+GQP+ LNLK+IL YFI HR+E
Sbjct: 301 MRVVIELKRNEVADVVLNNLFAHTQMQNVFGINMVALVDGQPRTLNLKQILEYFIKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR AH+LEGL IAL NID I +I+ + TPQ+AK+ ++ W V
Sbjct: 361 VVTRRTIFELKKARSRAHLLEGLGIALANIDEMIALIKQSPTPQDAKSALLSKIWQPGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ N + + L N YKLS+ QAQ IL++ L RLT +EQ KIIN++E
Sbjct: 421 KAMLEKAGSNASRPDDLTEEYGLHENG-YKLSEAQAQAILELRLHRLTALEQDKIINEFE 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L DIL++ +R++++I DEL IK+++G RR+EI + + + EDLI
Sbjct: 480 ELLNLIKELLDILASPERLMQVIRDELIEIKSQFGDE----RRTEITASQEDLTIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI+ Y+AQ+RGG+GK A KDED++ +L IA+THD +LCFSN
Sbjct: 536 EEDVVVTLSHQGYVKYQPITAYQAQRRGGKGKSATHVKDEDFVERLVIASTHDTLLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+LYWLK +Q+PQ SR SRG+PIIN+ L E+I +LP+ R++ +YVFM+T
Sbjct: 596 HGKLYWLKAYQLPQASRASRGRPIINILPLAEGEEINAMLPV----REYKDGSYVFMATK 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKK L+ FS PR +GIIAV+L +D L+G +TDG+ DIMLF+D+GK +RF+EN V
Sbjct: 652 KGTVKKVPLNAFSRPRSNGIIAVDLEEDDSLVGVDITDGTRDIMLFTDAGKVIRFDENKV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+R+EK Q V +L+V + ++LTATENGYGKRT I EY RG +G
Sbjct: 712 RPMGRTARGVRGIRVEKDQAVKSLVVVDPNGGTILTATENGYGKRTHIDEYRVSGRGGQG 771
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI+ +RNGKVV + V E MLIT G L+R +V+E+ +GR+TQGV LI V +
Sbjct: 772 VISIQVTERNGKVVRSLQVTDNDEAMLITDKGTLVRFKVNELSVIGRNTQGVRLINVSSG 831
Query: 841 SKLCGVQRLCKI 852
+ G+Q++ +
Sbjct: 832 ETVVGMQKIVDL 843
>gi|148358948|ref|YP_001250155.1| DNA gyrase subunit A [Legionella pneumophila str. Corby]
gi|296106997|ref|YP_003618697.1| DNA gyrase subunit A [Legionella pneumophila 2300/99 Alcoy]
gi|148280721|gb|ABQ54809.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
pneumophila str. Corby]
gi|295648898|gb|ADG24745.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
pneumophila 2300/99 Alcoy]
Length = 863
Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/850 (55%), Positives = 634/850 (74%), Gaps = 9/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MVYLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYLLIDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ LL DLDKET+DF NYD E P VLP+RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKVAHALLADLDKETVDFSPNYDETEFAPVVLPSRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ + ++ P+ S+ DL++IIP PDFPTA II G + + +GY TGKGRV
Sbjct: 181 NIPPHNLTEVINACIALVDEPDTSLEDLMEIIPGPDFPTAAIINGRAGIIEGYRTGKGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA+T IE R +III ELPYQVNK L+E+I++LV++KK+E IS LRDESDK G
Sbjct: 241 VIRARTEIETDENSGRQSIIIQELPYQVNKARLIERIAELVRDKKIEGISGLRDESDKQG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+ ++VLN L+ TQ+QN FG+NM+ALV+GQP+ LNLK+IL YFI HR+E
Sbjct: 301 MRVVIELKRNEVADVVLNNLFAHTQMQNVFGINMVALVDGQPRTLNLKQILEYFIKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR AH+LEGL IAL NID I +I+ + TPQ+AKN ++ W V
Sbjct: 361 VVTRRTIFELKKARNRAHLLEGLGIALANIDEMIALIKQSPTPQDAKNALLSKIWQPGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ N + + L N YKLS+ QAQ IL++ L RLT +EQ KIIN++E
Sbjct: 421 KAMLEKAGSNASRPDDLTEEYGLHENG-YKLSEAQAQAILELRLHRLTALEQDKIINEFE 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L DIL++ +R++++I DEL IK+++G RR+EI + + + EDLI
Sbjct: 480 ELLNLIKELLDILASPERLMQVIRDELIEIKSQFGDE----RRTEITASQEDLTIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI+ Y+AQ+RGG+GK A KDED++ +L IA+THD +LCFSN
Sbjct: 536 EEDVVVTLSHQGYVKYQPITAYQAQRRGGKGKSATHVKDEDFVERLVIASTHDTLLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+LYWLK +Q+PQ SR SRG+PIIN+ L E+I +LP+ R++ +YVFM+T
Sbjct: 596 HGKLYWLKAYQLPQASRTSRGRPIINILPLAEGEEINAMLPV----REYKDGSYVFMATK 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKK L+ FS PR +GIIAV+L +D L+G +TDG+ DIMLF+D+GK +RF+E+ V
Sbjct: 652 KGTVKKVPLNAFSRPRSNGIIAVDLEEDDSLVGVDITDGARDIMLFTDAGKVIRFDESKV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+R+EK Q V +L+V + ++LTATENGYGKRT I EY RG +G
Sbjct: 712 RPMGRTARGVRGIRVEKDQAVKSLVVVDPSGGTILTATENGYGKRTHIDEYRVSGRGGQG 771
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI+ +RNGKVV + V E MLIT G L+R +V+E+ +GR+TQGV LI V +
Sbjct: 772 VISIQVTERNGKVVRSLQVTDNDEAMLITDKGTLVRFKVNELSVIGRNTQGVRLINVSSG 831
Query: 841 SKLCGVQRLC 850
+ G+Q++
Sbjct: 832 ETVVGMQKIV 841
>gi|407789370|ref|ZP_11136471.1| DNA gyrase subunit A [Gallaecimonas xiamenensis 3-C-1]
gi|407206728|gb|EKE76678.1| DNA gyrase subunit A [Gallaecimonas xiamenensis 3-C-1]
Length = 857
Score = 989 bits (2557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/853 (55%), Positives = 633/853 (74%), Gaps = 16/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+ N WN
Sbjct: 1 MSDLAKEIVPVSIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YDA+VR+AQ FS+R TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDAIVRLAQPFSMRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DL+KET+DF+ NYD E+ P VLPTR+PNLL+NG++GIAVGMAT
Sbjct: 121 RYTEVRMAKISHELLADLEKETVDFVPNYDNTEQIPDVLPTRVPNLLVNGAAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+ G + ++ NPE +I++L++ IP PDFPT GII G S + D Y+TG+G++
Sbjct: 181 NIPPHNLKEVVGGCVALIDNPELTIDELMEYIPGPDFPTQGIINGKSGIRDAYHTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E R II+ ELPYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 YIRARAEVEVNEDNGRETIIVHELPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIELKR E E+VLNKLY TQ+Q FG+NM+AL QP+L NLK+ L FI HR+E
Sbjct: 301 LRVVIELKRGEAGEVVLNKLYSLTQMQVVFGINMVALDQNQPRLFNLKDSLECFINHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AH+LEGL IAL NID I++IR + TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARERAHVLEGLAIALANIDPVIELIRRSPTPAEAKAGLVSTPWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + ++ I + Y L+++QAQ IL + L RLT +E +KI++
Sbjct: 421 ASMLEGAGTDAARPESLEPQYGI----RDGKYYLTEVQAQAILDLRLHRLTGLEHEKILD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ + +L IL++ R++E+I +EL + ++G RR+EI ++ + S ED
Sbjct: 477 EYKGLLDLIKELLHILASPARLMEVIREELVAVAEQFGDE----RRTEISESSADISIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +++Y AQ+RGG+GK A KDED+I QL +ANTHD ILC
Sbjct: 533 LIAEEDVVVTLSHEGYVKYQALADYEAQRRGGKGKAATKMKDEDFIEQLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYWLKV+Q+P SR +RG+PIIN+ L+ E+IT ILP+ R++ + Y+FM
Sbjct: 593 FSSRGRLYWLKVYQLPLASRTARGRPIINLLPLEADERITAILPV----REYEEGKYIFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L+ +S PR +GIIAVNL+ D LIG +TDGS ++MLFSD GK VRF+E
Sbjct: 649 ATAFGTVKKTALTEYSRPRSNGIIAVNLNEGDELIGVTITDGSNEVMLFSDEGKVVRFSE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR A GV G+ LE Q V+++++ + + +LT TENGYGKRT EY +R
Sbjct: 709 DQVRAMGRGATGVRGINLEDGQSVVSMVIPSAE-VDILTVTENGYGKRTAQDEYPAKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
TKG++SIK ++RNGKVV A V EIMLI+ G L+RTRV+E+ ++GR+TQGV +I
Sbjct: 768 TKGVVSIKVSERNGKVVGAVAVEESDEIMLISNRGTLVRTRVNEVSRVGRNTQGVTIIRT 827
Query: 838 ENKSKLCGVQRLC 850
K+ G+QR+
Sbjct: 828 ATDEKVVGLQRIA 840
>gi|307610121|emb|CBW99663.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
pneumophila 130b]
Length = 863
Score = 989 bits (2557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/852 (55%), Positives = 635/852 (74%), Gaps = 9/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MVYLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYMLIDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ LL DLDKET+DF NYD E P VLP+RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKVAHALLADLDKETVDFSPNYDETEFAPVVLPSRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ + ++ P+ S+ DL++IIP PDFPTA II G + + +GY TGKGRV
Sbjct: 181 NIPPHNLTEVINACIALVDEPDTSLEDLMEIIPGPDFPTAAIINGRAGIIEGYRTGKGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA+T IE R +III ELPYQVNK L+E+I++LV++KK+E IS LRDESDK G
Sbjct: 241 VIRARTEIETDESSGRQSIIIQELPYQVNKARLIERIAELVRDKKIEGISGLRDESDKQG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+ ++VLN L+ TQ+QN FG+NM+ALV+GQP+ LNLK+IL YFI HR+E
Sbjct: 301 MRVVIELKRNEVADVVLNNLFAHTQMQNVFGINMVALVDGQPRTLNLKQILEYFIKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR AH+LEGL IAL NID I +I+ + TPQ+AK+ ++ W V
Sbjct: 361 VVTRRTIFELKKARSRAHLLEGLGIALANIDEMIALIKQSPTPQDAKSALLSKIWQPGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ N + + L N YKLS+ QAQ IL++ L RLT +EQ KIIN++E
Sbjct: 421 KAMLEKAGSNASRPDDLTEEYGLHENG-YKLSEAQAQAILELRLHRLTALEQDKIINEFE 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L DIL++ +R++++I DEL IK+++G RR+EI + + + EDLI
Sbjct: 480 ELLNLIKELLDILASPERLMQVIRDELIEIKSQFGDE----RRTEITASQEDLTIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI+ Y+AQ+RGG+GK A KDED++ +L IA+THD +LCFSN
Sbjct: 536 EEDVVVTLSHQGYVKYQPITAYQAQRRGGKGKSATHVKDEDFVERLVIASTHDTLLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+LYWLK +Q+PQ SR SRG+PIIN+ L E+I +LP+ R++ +YVFM+T
Sbjct: 596 HGKLYWLKAYQLPQASRASRGRPIINILPLAEGEEINAMLPV----REYKDGSYVFMATK 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKK L+ FS PR +GIIAV+L +D L+G +TDG+ DIMLF+D+GK +RF+E+ V
Sbjct: 652 KGTVKKVPLNAFSRPRSNGIIAVDLEEDDSLVGVDITDGARDIMLFTDAGKVIRFDESKV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+R+EK Q V +L+V + ++LTATENGYGKRT I EY RG +G
Sbjct: 712 RPMGRTARGVRGIRVEKDQAVKSLVVVDPSGGTILTATENGYGKRTHIDEYRVSGRGGQG 771
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI+ +RNGKVV + V E MLIT G L+R +V+E+ +GR+TQGV LI V +
Sbjct: 772 VISIQVTERNGKVVRSLQVTDNDEAMLITDKGTLVRFKVNELSVIGRNTQGVRLINVSSG 831
Query: 841 SKLCGVQRLCKI 852
+ G+Q++ +
Sbjct: 832 EAVVGMQKIVDL 843
>gi|374622999|ref|ZP_09695517.1| DNA gyrase subunit A [Ectothiorhodospira sp. PHS-1]
gi|373942118|gb|EHQ52663.1| DNA gyrase subunit A [Ectothiorhodospira sp. PHS-1]
Length = 858
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/851 (54%), Positives = 639/851 (75%), Gaps = 15/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKE++ + LE+EM +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MAEFAKEILPVNLEDEMRQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMRELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L D+DKET+DF+ NYDG E EPSV P ++PNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMAKIAHEMLSDIDKETVDFVDNYDGSESEPSVFPAQLPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++ + ++ +PE I+ L++ +P PDFPTAG I G +H+ Y TG+GR+
Sbjct: 181 NIPPHNLTEVVNACIALIDDPELGIDGLMEHLPGPDFPTAGTINGDRGIHEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+T IE R R +II+ ELPYQVNK LLE+I++LVKEKKLE IS LRDESDK G
Sbjct: 241 YVRARTEIETDERTGRQSIIVTELPYQVNKARLLERIAELVKEKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+V+ELKR E+PE+++N LY+ TQ+QN FG+NM+ALV+GQP+LL+LK+IL F+ HR+E
Sbjct: 301 MRMVVELKRGEVPEVIINNLYQHTQMQNVFGINMVALVDGQPRLLDLKQILEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE AH+LEGL +AL NID I +I+++ +P EAK ++ WN P V
Sbjct: 361 VVTRRTIYELRKARERAHVLEGLAVALANIDEVIALIKASGSPAEAKQGLLARAWN-PGV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ G ++ S+ +++ D Y LS+ QAQ IL + L RLT +EQ KI+ +
Sbjct: 420 --VTGMLERAGALASRPEDLAPELGLKEDGYHLSEAQAQAILDLRLHRLTGLEQDKIVAE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y +++++ L +IL + R++ +I +EL I+ +YG RR+EI+ ++ + EDL
Sbjct: 478 YRELLERIHYLLEILGSPDRLMTVIREELEAIREQYGDE----RRTEILSTQLDLTLEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY K QP+S YRAQ+RGGRGK A +DED++++L +ANTHD ILCF
Sbjct: 534 ITEEDVVVTLSHAGYAKYQPLSTYRAQRRGGRGKTATTFRDEDFVDRLVVANTHDTILCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ G+ YWLKV+++P GSR +RG+P++N+ L+ E+I ILP+ R++ ++ YVFM+
Sbjct: 594 SSRGKAYWLKVYELPLGSRTARGRPMVNLLPLEEGERINAILPV----REYREDVYVFMA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G+VKKT L +FS PR +GIIAV L D+L+ +TDG D+ML + +GKA+RFNE+
Sbjct: 650 TSEGVVKKTSLVDFSRPRSNGIIAVGLREGDWLVDVKITDGQKDVMLLTSAGKAIRFNED 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
SVR MGR+A GV G++L + Q+VI+L++ + + ++L ATENGYGKRT +++ H RG
Sbjct: 710 SVRPMGRTASGVRGVKLGEGQQVISLIIVD--QGTILVATENGYGKRTPPEDFPLHGRGG 767
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I+I+T RNG VV ATLV E+MLIT GG L+RT V++I +GR+TQGV LI +
Sbjct: 768 QGVIAIQTGGRNGNVVGATLVGDEDEVMLITNGGTLVRTPVADISVLGRNTQGVRLIRLA 827
Query: 839 NKSKLCGVQRL 849
+ L + R+
Sbjct: 828 DDENLVELARV 838
>gi|357405842|ref|YP_004917766.1| DNA gyrase subunit A [Methylomicrobium alcaliphilum 20Z]
gi|351718507|emb|CCE24178.1| DNA gyrase subunit A [Methylomicrobium alcaliphilum 20Z]
Length = 873
Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/849 (55%), Positives = 627/849 (73%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE+I + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSDFAKEIIPVNLEDEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGDS AAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL D+DKET+DFI+NYD E EP VLPTR+P LLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADIDKETVDFIANYDESESEPKVLPTRVPTLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ L + NPE +I++L++ IP PDFPTA I G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVVSACLAQIENPEITISELMQFIPGPDFPTAATINGAAGIRSAYATGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ H EE R AII ELPYQVNK LLEKI+++VKE KLE IS LRDESDK G
Sbjct: 241 YLRARCHFEEIGESGRYAIITTELPYQVNKARLLEKIAEMVKEAKLEGISGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL+R E+PE++LN LYKQTQ+Q FG+NM+AL+ G+P +NLKEIL FI HR+E
Sbjct: 301 MRMVIELRRGEVPEVILNNLYKQTQMQTVFGINMVALLGGRPHCMNLKEILTAFIDHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
++ RRT++ LRKAR+ AHILEGL IAL NID I +I+S EAK ++ TW V
Sbjct: 361 IVTRRTVYNLRKARDRAHILEGLAIALANIDEMIALIKSAKDSAEAKAGLLSRTWEAGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + L + Y+LS+ QA IL + L RLT +EQ+KI+N+Y
Sbjct: 421 NALLDHADADRSRPEDLTPEFGLVDG-YYRLSETQASAILDLRLHRLTGLEQEKIVNEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++K + + +IL + R++E+I +EL IK +YG RR+EI+ + ++ + EDLI
Sbjct: 480 DLLKLIDEYLEILGSDVRLMEVIKEELEAIKAEYGDE----RRTEILQDHLDLTDEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+T+S+ GY+K+QP+ +Y+AQ+RGGRGK A TK+ D+I++L +ANTHD ILCFS+
Sbjct: 536 EEDMVVTVSHEGYVKAQPLDDYKAQRRGGRGKSATATKETDFIDKLIVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+Q+P SR SRGKP +N+ L+ E I +LP+ R+F + ++FM+T+
Sbjct: 596 LGKVYWLKVYQLPVASRASRGKPFVNLLPLEAGENINALLPV----REFSADKFIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L F R +G IA++L ED L+G A+TDG +I+LFS GKAV FNE V
Sbjct: 652 NGTVKKTPLPEFERQRTNGKIAIDLREEDALVGVAVTDGQQNILLFSTDGKAVCFNEEDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+RL+ QKVI+L+VS + +VLT TENGYGKRT +KE+ + RG +G
Sbjct: 712 RSMGRTAAGVRGIRLQPGQKVISLIVS--AEGTVLTITENGYGKRTHLKEFVRKGRGGQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI+T++RNG VV A LV+ EIMLIT GG L+RTRV EI +GR+TQGV +I ++
Sbjct: 770 VISIQTSERNGNVVGAVLVSERDEIMLITNGGTLVRTRVDEISIVGRNTQGVTVIRLDKN 829
Query: 841 SKLCGVQRL 849
K+ GV R+
Sbjct: 830 EKVVGVDRI 838
>gi|397663849|ref|YP_006505387.1| DNA gyrase subunit A [Legionella pneumophila subsp. pneumophila]
gi|395127260|emb|CCD05450.1| DNA gyrase (type II topoisomerase), subunit A [Legionella
pneumophila subsp. pneumophila]
Length = 866
Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/850 (55%), Positives = 634/850 (74%), Gaps = 9/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MVYLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYLLIDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ LL DLDKET+DF NYD E P VLP+RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKVAHALLADLDKETVDFSPNYDETEFAPVVLPSRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ + ++ P+ S+ DL++IIP PDFPTA II G + + +GY TGKGRV
Sbjct: 181 NIPPHNLTEVINACIALVDEPDTSLEDLMEIIPGPDFPTAAIINGRAGIIEGYRTGKGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA+T IE R +III ELPYQVNK L+E+I++LV++KK+E IS LRDESDK G
Sbjct: 241 VIRARTEIETDESSGRQSIIIQELPYQVNKARLIERIAELVRDKKIEGISGLRDESDKQG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+ ++VLN L+ TQ+QN FG+NM+ALV+GQP+ LNLK+IL YFI HR+E
Sbjct: 301 MRVVIELKRNEVADVVLNNLFAHTQMQNVFGINMVALVDGQPRTLNLKQILEYFIKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR AH+LEGL IAL NID I +I+ + TPQ+AK+ ++ W V
Sbjct: 361 VVTRRTIFELKKARSRAHLLEGLGIALANIDEMIALIKQSPTPQDAKSALLSKIWQPGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ N + + L N YKLS+ QAQ IL++ L RLT +EQ KIIN++E
Sbjct: 421 KAMLEKAGSNASRPDDLTEEYGLHENG-YKLSEAQAQAILELRLHRLTALEQDKIINEFE 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L DIL++ +R++++I DEL IK+++G RR+EI + + + EDLI
Sbjct: 480 ELLNLIKELLDILASPERLMQVIRDELIEIKSQFGDE----RRTEITASQEDLTIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI+ Y+AQ+RGG+GK A KDED++ +L IA+THD +LCFSN
Sbjct: 536 EEDVVVTLSHQGYVKYQPITAYQAQRRGGKGKSATHVKDEDFVERLVIASTHDTLLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+LYWLK +Q+PQ SR SRG+PIIN+ L E+I +LP+ R++ +YVFM+T
Sbjct: 596 HGKLYWLKAYQLPQASRASRGRPIINILPLAEGEEINAMLPV----REYKDGSYVFMATK 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKK L+ FS PR +GIIAV+L +D L+G +TDG+ DIMLF+D+GK +RF+E+ V
Sbjct: 652 KGTVKKVPLNAFSRPRSNGIIAVDLEEDDSLVGVDITDGARDIMLFTDAGKVIRFDESKV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+R+EK Q V +L+V + ++LTATENGYGKRT I EY RG +G
Sbjct: 712 RPMGRTARGVRGIRVEKDQAVKSLVVVDPSGGTILTATENGYGKRTHIDEYRVSGRGGQG 771
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI+ +RNGKVV + V E MLIT G L+R +V+E+ +GR+TQGV LI V +
Sbjct: 772 VISIQVTERNGKVVRSLQVTDNDEAMLITDKGTLVRFKVNELSVIGRNTQGVRLINVSSG 831
Query: 841 SKLCGVQRLC 850
+ G+Q++
Sbjct: 832 ETVVGMQKIV 841
>gi|114320084|ref|YP_741767.1| DNA gyrase subunit A [Alkalilimnicola ehrlichii MLHE-1]
gi|114226478|gb|ABI56277.1| DNA gyrase subunit A [Alkalilimnicola ehrlichii MLHE-1]
Length = 862
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/849 (54%), Positives = 641/849 (75%), Gaps = 13/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MASVAREILPVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ F++R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KSYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFAMRYMLVDGQGNFGSIDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++ELL D++KET+D++ NYDG E EP+VLPTR+PNLL+NG SGIAVGMAT
Sbjct: 121 RYTEVRMSRLAHELLADIEKETVDYLDNYDGSESEPTVLPTRVPNLLVNGGSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EVID + ++ + ++ L++ +P PD PTAGII G + +H+ Y TG+GR+
Sbjct: 181 NIPPHNIREVIDACVALIDDDSLDVDALMQYLPGPDLPTAGIINGTAGIHEAYRTGRGRM 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ IEE ++ + II+ ELPYQVNK LLEKI++LVKEK++E I+ LRDESDK G
Sbjct: 241 VMRARARIEEDDKSGKARIIVSELPYQVNKARLLEKIAELVKEKRVEGITELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E+ E+VLN LY+ TQLQ FG+NM+ALV+GQPKLLNL++IL F+ HR+E
Sbjct: 301 IRVVIELRRGEVGEVVLNNLYQHTQLQTVFGINMVALVDGQPKLLNLRQILDAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGL +AL NID I +I+++ P EAK ++ W V
Sbjct: 361 VVTRRTIFELRKARNRAHVLEGLAVALANIDPVIALIKASPGPAEAKTALMSRVWAPGMV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + T ++ L D Y+LS QAQ IL++ L RLT +EQ+KI+ +Y
Sbjct: 421 TDML--ERADATTPDDLSPDVGL-GEDGYRLSAAQAQAILELRLHRLTGLEQEKILEEYR 477
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL + +R++E+I +EL I+ +YG RRSEII A++ + EDLI
Sbjct: 478 GLLEQIGELIHILESGERLMEVIREELVAIREQYGDE----RRSEIIPQALDLTLEDLIT 533
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
QD+V+TLS+ GY KSQP+ YRAQ+RGGRGK A KD D++++LF+ANTHD +LCFS+
Sbjct: 534 PQDVVVTLSHSGYAKSQPLDSYRAQRRGGRGKSATAMKDADFVDKLFVANTHDTLLCFSS 593
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+ YWLKV+++PQGSR SRGKPI+N+ L+ E+I +LP+ ++F ++VFM+T
Sbjct: 594 HGKCYWLKVYELPQGSRQSRGKPIVNLLPLEPDERINAVLPV----QEFDDAHFVFMATH 649
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT LS+FS PR +GIIA++L +D+L+ A+TDGS D+ML SD+GKA+RF E+ V
Sbjct: 650 NGTVKKTPLSHFSRPRSNGIIALDLRADDWLVDVAITDGSRDVMLVSDAGKAIRFEESQV 709
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G+RLE Q+VIALL+ ++ +L+AT NGYGKRT ++EY + RG G
Sbjct: 710 RAMGRTAAGVRGIRLEPGQRVIALLILDD--GDILSATANGYGKRTPVEEYPRRGRGGMG 767
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I I+T+ RNG+VV A V EIMLIT G L+RT V++I ++ R+TQGV LI+++
Sbjct: 768 VICIQTSDRNGEVVGAVQVADEDEIMLITRHGTLVRTPVADISRLSRNTQGVKLISLDED 827
Query: 841 SKLCGVQRL 849
L G++R+
Sbjct: 828 ETLVGLERI 836
>gi|52841647|ref|YP_095446.1| DNA gyrase subunit A [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|378777282|ref|YP_005185719.1| DNA gyrase subunit A [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|52628758|gb|AAU27499.1| DNA gyrase, A subunit [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|364508096|gb|AEW51620.1| DNA gyrase, A subunit [Legionella pneumophila subsp. pneumophila
ATCC 43290]
Length = 871
Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/852 (55%), Positives = 636/852 (74%), Gaps = 9/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E++N WN
Sbjct: 9 MVYLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELSNDWN 68
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD+ AAM
Sbjct: 69 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYMLIDGQGNFGSVDGDAPAAM 128
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ LL DLDKET+DF NYD E P VLP+RIPNLL+NGSSGIAVGMAT
Sbjct: 129 RYTEVRMSKVAHALLADLDKETVDFSPNYDETEFAPVVLPSRIPNLLVNGSSGIAVGMAT 188
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ + ++ P+ S+ DL++IIP PDFPTA II G + + +GY TGKGRV
Sbjct: 189 NIPPHNLTEVINACIALVDEPDTSLEDLMEIIPGPDFPTAAIINGRAGIIEGYRTGKGRV 248
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA+T IE R +III ELPYQVNK L+E+I++LV++KK+E IS LRDESDK G
Sbjct: 249 VIRARTEIETDESSGRQSIIIQELPYQVNKARLIERIAELVRDKKIEGISGLRDESDKQG 308
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+ ++VLN L+ TQ+QN FG+NM+ALV+GQP+ LNLK+IL YFI HR+E
Sbjct: 309 MRVVIELKRNEVADVVLNNLFAHTQMQNVFGINMVALVDGQPRTLNLKQILEYFIKHRRE 368
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR AH+LEGL IAL NID I +I+ + TPQ+AK+ ++ W V
Sbjct: 369 VVTRRTIFELKKARSRAHLLEGLGIALANIDEMIALIKQSPTPQDAKSALLSKIWQPGLV 428
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ N + + L + YKLS+ QAQ IL++ L RLT +EQ KIIN++E
Sbjct: 429 KAMLEKAGSNASRPDDLTEEYGLHESG-YKLSEAQAQAILELRLHRLTALEQDKIINEFE 487
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L DIL++ +R++++I DEL IK+++G RR+EI + + + EDLI
Sbjct: 488 ELLNLIKELLDILASPERLMQVIRDELIEIKSQFGDE----RRTEITASQEDLTIEDLIT 543
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI+ Y+AQ+RGG+GK A KDED++ +L IA+THD +LCFSN
Sbjct: 544 EEDVVVTLSHQGYVKYQPITAYQAQRRGGKGKSATHVKDEDFVERLVIASTHDTLLCFSN 603
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+LYWLK +Q+PQ SR SRG+PIIN+ L E+I +LP+ R++ +YVFM+T
Sbjct: 604 HGKLYWLKAYQLPQASRASRGRPIINILPLAEGEEINAMLPV----REYKDGSYVFMATK 659
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKK L+ FS PR +GIIAV+L +D L+G +TDG+ DIMLF+D+GK +RF+E+ V
Sbjct: 660 KGTVKKVPLNAFSRPRSNGIIAVDLEEDDSLVGVDITDGARDIMLFTDAGKVIRFDESKV 719
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+R+EK Q V +L+V + ++LTATENGYGKRT I EY RG +G
Sbjct: 720 RPMGRTARGVRGIRVEKDQAVKSLVVVDPSGGTILTATENGYGKRTHIDEYRVSGRGGQG 779
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI+ +RNGKVV + V E MLIT G L+R +V+E+ +GR+TQGV LI V +
Sbjct: 780 VISIQVTERNGKVVRSLQVTDNDEAMLITDKGTLVRFKVNELSVIGRNTQGVRLINVSSG 839
Query: 841 SKLCGVQRLCKI 852
+ G+Q++ +
Sbjct: 840 EAVVGMQKIVDL 851
>gi|344943782|ref|ZP_08783068.1| DNA gyrase, A subunit [Methylobacter tundripaludum SV96]
gi|344259440|gb|EGW19713.1| DNA gyrase, A subunit [Methylobacter tundripaludum SV96]
Length = 877
Score = 986 bits (2549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/849 (55%), Positives = 636/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKE+I + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSNFAKEIIPVNLEDEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ+FS+R L+DGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTMVRMAQNFSMRYMLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+DF NYD E EP VLPTR+P LLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDFAPNYDESESEPKVLPTRVPTLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI L ++ P+ +++DL+ IP PDFPTA II G S +++ Y TG+G++
Sbjct: 181 NIPPHNLSEVISACLAMIDQPDLTVHDLMAHIPGPDFPTAAIINGASGIYNAYTTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ H E+ +R AII ELPYQVNK LLEKI++LVKE KLE IS LRDESDK G
Sbjct: 241 YLRARCHFEDIGDSSRQAIITTELPYQVNKARLLEKIAELVKEGKLEGISGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL+R E+PE+VLN LYKQTQ Q FG+NM+AL++G+P +NL+EI+ FI HR+E
Sbjct: 301 MRMVIELRRGEMPEVVLNNLYKQTQFQTVFGINMVALLDGRPHCMNLREIISAFINHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
++ RRTI+ LRKARE AHILEGL IAL NID I +I++ +TP +AK ++E W+ V
Sbjct: 361 IVTRRTIYNLRKARERAHILEGLAIALANIDEMIALIKAAATPADAKVGLLEKNWDAGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + + + +Y+LS+ QAQ IL++ L RLT +EQ KI+N+Y+
Sbjct: 421 AALLDRADADRSRPDDL-PVEFGIHAGIYRLSETQAQAILELRLHRLTGLEQDKIVNEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ + IL + R++EII +EL IK +Y RR+EI+ N + S EDLI
Sbjct: 480 QLLEQIDEYLFILGSDVRLMEIIREELVAIKEQYSDE----RRTEILQNHSDLSDEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+T+S+ GY+KSQP+S+Y+AQ+RGGRGK A TK+ D++++L +ANTHD ILCFS+
Sbjct: 536 EEDMVVTMSHEGYVKSQPLSDYKAQRRGGRGKSATATKELDYVDKLIVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+Q+P SR +RGKP +N+ L+ EKI ILP+ R+F + ++FM+T+
Sbjct: 596 RGKVYWLKVYQLPVASRAARGKPFVNLLPLEEGEKINAILPI----REFTDSKFIFMATT 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L F N R +G IA++L +D L+G A+TDG +++LFS +GKAV FNE V
Sbjct: 652 AGTVKKTPLKEFENQRANGKIAIDLREDDTLVGVAVTDGQQNVLLFSSTGKAVCFNEADV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+RL++ QKVI+L+++ + +VL TENGYGKRT ++E+T H RG +G
Sbjct: 712 RSMGRTASGVRGIRLQEGQKVISLIIAT--EGTVLNITENGYGKRTKLEEFTCHKRGGQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+T+ RNG VV A LVN EIMLIT GG L+RT V I +GR+TQGV +I +
Sbjct: 770 LIAIQTSARNGAVVGAVLVNDNDEIMLITDGGTLVRTPVDGISVVGRNTQGVTIIKLGKN 829
Query: 841 SKLCGVQRL 849
K+ GV R+
Sbjct: 830 EKVIGVDRI 838
>gi|121997372|ref|YP_001002159.1| DNA gyrase subunit A [Halorhodospira halophila SL1]
gi|121588777|gb|ABM61357.1| DNA gyrase subunit A [Halorhodospira halophila SL1]
Length = 856
Score = 985 bits (2547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/850 (53%), Positives = 639/850 (75%), Gaps = 12/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N +N
Sbjct: 1 MTGVAREILPVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VR+AQSFS+R LVDGQGNFGSIDGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDAAVYDTIVRLAQSFSMRYRLVDGQGNFGSIDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ELL D+DKET+DF+ NYDG E+EP VLPTR+PNLL+NG SGIAVGMAT
Sbjct: 121 RYTEVRMARLAHELLADIDKETVDFVDNYDGSEQEPHVLPTRLPNLLVNGGSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVID + ++ +PE + LI+ +PAPD PT GII+G + +H + TG+GR+
Sbjct: 181 NIPPHNLREVIDACVALVDDPELPVESLIEYVPAPDLPTGGIIFGTAGIHQAFRTGRGRM 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ +EE +R I++ ELPYQVNK L+EKI++LVKE++LE IS LRDESDK G
Sbjct: 241 VLRARAEVEEMT-ADRERIVVTELPYQVNKARLVEKIAELVKERRLEGISELRDESDKEG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+RIV+ELKR E EIVLN LY+ TQ+Q FG+N++AL GQP+ LNL+++L FI HR+E
Sbjct: 300 IRIVLELKRGEAGEIVLNNLYRHTQMQTVFGINVVALHEGQPRTLNLRQVLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE AH+LEGL +AL NID I +I+ +S P EAK +++ W V
Sbjct: 360 VVTRRTIYELRKARERAHVLEGLAVALANIDEVIALIKGSSGPAEAKAELVAREWRPGVV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++++ + + L ++ +Y+LS+ QAQ IL + L RLT MEQ KI+ +Y
Sbjct: 420 TEMLERAGAAATRPEDLADHFGLDADSGIYRLSEAQAQAILDLRLHRLTAMEQDKIVEEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
N+++++ +L IL + +R++E+I +EL I+++YG +K +EI + S EDLI
Sbjct: 480 SNLLERIAELIHILDSGERLMEVIREELVAIRDQYGDERK----TEIREDTAELSLEDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+ +DMV+TLS+ GY+K+QP+ YRAQ+RGGRGK A KDED+I++LFIANTHD +LCFS
Sbjct: 536 SEEDMVVTLSHHGYVKAQPLDGYRAQRRGGRGKSATAMKDEDFIDKLFIANTHDTLLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+ YW KV+++PQGSR SRG+P++N+ L+ E+I ++P+ R+F ++++VFM+T
Sbjct: 596 STGKCYWRKVYELPQGSRTSRGRPMVNLLPLEEDERINAVVPV----REFDEDHFVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT LS+FS PR SGIIAV L +D L+ A +T+G ++ML SD+GKA+RF+E+
Sbjct: 652 RNGTVKKTPLSHFSRPRSSGIIAVELRGDDTLVDAEITNGDREVMLLSDAGKALRFHESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+A GV G+RLE Q+VIALL+ + +LTATE+GYGKRT +++Y + RG
Sbjct: 712 VRAMGRTAGGVRGIRLESGQRVIALLILG--EGDILTATEHGYGKRTPVEDYPRRGRGGM 769
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I I+T +RNG+VV A EIML++ G L+RT V+++ ++GR+TQGV LI+++
Sbjct: 770 GVICIRTTERNGRVVGAVQAAEDDEIMLVSRSGTLVRTPVADVSRVGRNTQGVKLISLDE 829
Query: 840 KSKLCGVQRL 849
+L G++R+
Sbjct: 830 AEQLVGLERV 839
>gi|336315845|ref|ZP_08570751.1| DNA gyrase, A subunit [Rheinheimera sp. A13L]
gi|335879835|gb|EGM77728.1| DNA gyrase, A subunit [Rheinheimera sp. A13L]
Length = 874
Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/852 (55%), Positives = 638/852 (74%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTNLAKEIVPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMKELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I+ ELL DLDKET+DF+ NYDG E P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSRIAGELLADLDKETVDFVPNYDGTEMIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVID L ++ NP+ SI +L++++P PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVIDACLALIANPDISIPELMELMPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+THIE + R I++DE+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARTHIETDEKTGRETIVVDEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E ++++N LY QTQ+Q FG+NM+AL GQPKL+ LK +L F+LHR+E
Sbjct: 301 MRIVIEVKRGESSDVLINHLYTQTQMQTVFGINMVALDQGQPKLMGLKHMLQCFVLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+++LRKAR+ AHILEGL IAL NID I +I+++S+P +AK ++ W L DV
Sbjct: 361 VVTRRTVYDLRKARDRAHILEGLAIALANIDEIIDLIKNSSSPADAKQGLVARGWQLGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ +N + +++ + Y L++ QAQ IL + L +LT +E +KI+++Y+
Sbjct: 421 SAMLERAGENAARPEWLEEHFGIRDGE-YFLTEQQAQAILDLRLHKLTGLEHEKILDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL + +R++E+I +EL K +YG + RR+EI NA++ + EDLI
Sbjct: 480 ELLLLIAELLHILGSPERLMEVICEELEAAKAQYG----DARRTEIQDNAMDINMEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+LGY K Q +S+Y AQ+RGGRGK A KDED+++QL IA+THD ILCFSN
Sbjct: 536 EEDVVVTLSHLGYAKYQALSDYEAQRRGGRGKAATTVKDEDFVDQLLIASTHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ + YVFM+T+
Sbjct: 596 RGRLYWMKVYQLPLASRQARGKPIVNLLPLEENERITAILPV----REYEEGKYVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ +S PR +GIIAVNL+ D LIG +TDG+ IMLFSD GK VRF E+ V
Sbjct: 652 NGTVKKTSLTEYSRPRSNGIIAVNLNEGDQLIGVDITDGNSQIMLFSDDGKVVRFKEDQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR A GV G+RL + V++L+V ++ ++LT TENGYGKRT ++EY + +R T+G
Sbjct: 712 RPMGRGATGVRGIRLRENGSVVSLIVPKSEG-AILTVTENGYGKRTALQEYPEKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A VN EIMLI+ G L+RTRVSE+ ++GR+T GVILI
Sbjct: 771 VVSIKVSERNGLVVGAVQVNALDEIMLISDKGTLVRTRVSEVSQVGRNTAGVILIRTIEG 830
Query: 841 SKLCGVQRLCKI 852
K+ GVQR+ +I
Sbjct: 831 EKVVGVQRIDEI 842
>gi|308049654|ref|YP_003913220.1| DNA gyrase subunit A [Ferrimonas balearica DSM 9799]
gi|307631844|gb|ADN76146.1| DNA gyrase subunit A [Ferrimonas balearica DSM 9799]
Length = 876
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/854 (54%), Positives = 645/854 (75%), Gaps = 15/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E+ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MTDLATEITPINIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++ELL DLDKET+D++ NYDG E+ P+VLPT++PNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMDRIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKVPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+DG L+++ N +I++LI+IIP PDFPT GII G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVDGCLHLIDNEHATIDELIEIIPGPDFPTGGIINGRKGIFEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAKT + E ++ R AII++E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YVRAKTEV-ETDKNGREAIIVNEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIELKR E+PE+VLN LY QTQ+Q FGMNM+AL NGQPK+ NLKE+L FI HR+E
Sbjct: 300 MRIVIELKRGEVPEVVLNNLYAQTQMQTVFGMNMVALANGQPKIFNLKEMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE AHILEGL IAL NID I++IR + TP EA+ ++ W+L +V
Sbjct: 360 VVTRRTVYELRKARERAHILEGLAIALANIDPIIELIRQSPTPAEAREALLSQGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ G +K + ++ ++ + Y L+ QA+ IL + LQ+LT +E + I+++
Sbjct: 420 A---GMLEKAGDDAARPEWLTPEYGIRDGKYYLTLEQAKAILDLRLQKLTGLEHEAILDE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+++++++ +L IL +++R++E+I +EL +K +YG R +EI + + S EDL
Sbjct: 477 YKSLLEQIAELLHILGSTERLMEVIREELEAVKTQYGDE----RMTEISAASADISMEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 533 ITQEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ G++YW++V+Q+P SR +RG+PI+N+ L E+IT ILP+ ++ + ++ +
Sbjct: 593 SSIGKVYWMRVFQLPLASRTARGRPIVNLLPLGEGERITAILPVE----EYSADKFILFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L+ +S P SGI A+NL+++D LIG +T+G+ ++MLFSD+GK VRFNE+
Sbjct: 649 TAKGTVKKTALNAYSRPLSSGIRAINLADDDELIGVNITEGNNEVMLFSDAGKVVRFNED 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VRAMGR+A GV G+ LE +V++L+V ++ ++LT TENG+GKRT +EY +R T
Sbjct: 709 QVRAMGRTATGVRGINLEGSDRVVSLIVP-DEDGAILTVTENGFGKRTPQQEYPTKSRAT 767
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG+ISIK ++RNG VV A V EIMLIT G L+RTRVSE+ ++GR+TQGV LI
Sbjct: 768 KGVISIKVSERNGLVVGAVQVGENDEIMLITNRGTLVRTRVSEVSEVGRNTQGVRLIRTA 827
Query: 839 NKSKLCGVQRLCKI 852
++ G++R+ ++
Sbjct: 828 EGEQVVGLERIDEV 841
>gi|221134590|ref|ZP_03560895.1| DNA gyrase, A subunit [Glaciecola sp. HTCC2999]
Length = 885
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/855 (55%), Positives = 640/855 (74%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MTDRAKEILPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET++F+ NYDG EK P V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVNFVPNYDGTEKIPEVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G + ++ NP C+I +LI+ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCVALIENPACTIEELIEYIPGPDFPTAAIISGRKGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + T II++ELPYQVNK L+EKI++LVKEK++E +S LRDESDK G
Sbjct: 241 YLRARAEIEREDNGKET-IIVNELPYQVNKAKLIEKIAELVKEKRIEGVSALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KRNE E++LN LY TQLQ FG+NM+AL N QPK+ NLK+ L FILHR+E
Sbjct: 300 MRIVIEVKRNESAEVLLNHLYANTQLQTVFGINMVALDNNQPKVFNLKDTLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++EL+KAR+ AH+LEGL IAL NID I++I+++ +P EAK K+ W L DV
Sbjct: 360 VVTRRTVYELKKARDRAHLLEGLAIALANIDPVIELIKASPSPSEAKLKLTAQGWALGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++++ G + + + I + +Y L++ QAQ IL + L +LT +E KI++
Sbjct: 420 AEMLERAGDDAARPDWLEPEYGI----RDGLYYLTEQQAQAILDLRLHKLTGLEHDKILS 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y++++ + +L IL +S+R++E+I +EL I++++G RR+EI + + ED
Sbjct: 476 EYKDLLDVIAELLRILGSSERLMEVIREELEAIRDEFGDD----RRTEITAASHDIDLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K Q +S+Y AQKRGG+GK A KDED+I +L +ANTHD+ILC
Sbjct: 532 LIEREDVVVTLSHEGYVKYQKLSDYEAQKRGGKGKSATKMKDEDFIEKLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F YVFM
Sbjct: 592 FSTRGRLYWLKVYQLPLASRNARGRPIVNILPLEEGERITAILPI----KEFVDGKYVFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L+ +S PR +GIIAVNL++ + LIG LTDG +IMLFSD+GK VRF+E
Sbjct: 648 ATTNGTVKKTELTQYSRPRANGIIAVNLNDGNELIGVDLTDGDSEIMLFSDAGKVVRFHE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VR MGR+A GV G+RLE+ QKV++L+V + +VLTATENGYGKRT I EY +R
Sbjct: 708 EQVRPMGRTATGVRGIRLEEDQKVVSLIVPQGEG-AVLTATENGYGKRTDIAEYPAKSRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
TKG++SIK ++RNG VV A VN EIMLI+ G L+RTR +E+ +GR+TQGV LI
Sbjct: 767 TKGVVSIKVSERNGLVVGAVQVNEDDEIMLISDQGTLVRTRATEVSTVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ ++
Sbjct: 827 GENENVVGLQRIDEV 841
Score = 48.1 bits (113), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKI-TVILPLSNNKRDFPKNN 653
I+ FS+ G++ Q+ R + G + L+ +K+ ++I+P
Sbjct: 693 IMLFSDAGKVVRFHEEQVRPMGRTATG---VRGIRLEEDQKVVSLIVPQGEGA------- 742
Query: 654 YVFMSTSLGIVKKTLLSNFSNPRKS----GIIAVNLSNED-FLIGAALTDGSYDIMLFSD 708
V +T G K+T ++ + P KS G++++ +S + ++GA + +IML SD
Sbjct: 743 -VLTATENGYGKRTDIAEY--PAKSRATKGVVSIKVSERNGLVVGAVQVNEDDEIMLISD 799
Query: 709 SGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENG 761
G VR V +GR+ +GV +R + + V+ L + + S + E G
Sbjct: 800 QGTLVRTRATEVSTVGRNTQGVTLIRTGENENVVGLQRIDEVESSNIETDEEG 852
>gi|344342373|ref|ZP_08773244.1| DNA gyrase, A subunit [Marichromatium purpuratum 984]
gi|343805709|gb|EGV23604.1| DNA gyrase, A subunit [Marichromatium purpuratum 984]
Length = 867
Score = 982 bits (2539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/857 (53%), Positives = 641/857 (74%), Gaps = 19/857 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FA+EV+ I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+MHE N+WN
Sbjct: 1 MPEFAREVLPINLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMHEQGNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K ARVVG+ MGKYHPHGD +IYD +VRMAQ FS+R LVDGQGNFGS+DGD AAM
Sbjct: 61 RAYRKSARVVGDVMGKYHPHGDSAIYDTMVRMAQPFSMRNLLVDGQGNFGSVDGDPPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ LL DLDKET+DF NYD E+EP+VLP R PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTRIADALLDDLDKETVDFAPNYDNTEQEPTVLPARFPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVID L ++ +P + LI+++P PDFPT +I G+ + + Y +G+GRV
Sbjct: 181 NIPPHNLNEVIDACLAIIDDPMVDLEQLIELVPGPDFPTGALINGVHGIREAYRSGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISN--LRDESDK 298
++RA+ IEE +R R AI++ ELPYQVNK LLE+I++LVKEKK+E I+ LRDESDK
Sbjct: 241 VMRARADIEEQSRSGREAIVVTELPYQVNKARLLERIAELVKEKKIEGIAQDGLRDESDK 300
Query: 299 SGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHR 358
GMRIVIELKR+ PE++LN LY+ TQ+Q FG+NM+ALV+GQP+ LNLK+IL YF+ HR
Sbjct: 301 DGMRIVIELKRDTHPEVLLNNLYQHTQMQQVFGINMVALVDGQPRTLNLKQILEYFLRHR 360
Query: 359 KEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLP 418
++V+ RRT++ELRKAR+ AH+LEG IAL NID I I+++ +P EA+ +++ W
Sbjct: 361 RDVVTRRTLYELRKARDRAHVLEGYAIALANIDEVIATIKASPSPAEARERLMMRAWAPG 420
Query: 419 DVSKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKI 475
VS ++ G + T+ ++ ++ Y+LS+ QA+ IL++ L RLT +EQ+KI
Sbjct: 421 AVSDMLSRTGAEQTRPETLDPGFGMT----DEGYRLSERQAKAILELQLHRLTGLEQEKI 476
Query: 476 INKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPST 535
+ ++E ++ ++ +L IL + R++ +I +EL I+ ++GS RR+EI ++ + +
Sbjct: 477 LKEFEEILARIGELLAILGDPDRLMAVIREELEAIREQFGS----ARRTEIQVDHTDLTL 532
Query: 536 EDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYI 595
EDLIA +D+V+TLS+ GY+K+QP+S+Y+AQ RGGRGK A ++ED+I++LF+ANTHD +
Sbjct: 533 EDLIAPEDLVVTLSHQGYVKAQPLSDYQAQHRGGRGKSATSFREEDFIDRLFVANTHDTV 592
Query: 596 LCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYV 655
LCFS+ GR+YW+KV+++PQG R++RG+P++N+ L+ E+IT +LP+ R++ +V
Sbjct: 593 LCFSSRGRVYWIKVYELPQGGRSARGRPMVNLLPLEQGERITAMLPV----REYEDGYFV 648
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+TS G VKKT L +FS P GIIA++L +++L+G A+TDG D+MLF+ +GKAVRF
Sbjct: 649 FMATSAGTVKKTPLRDFSRPLSRGIIAIDLHEDEYLVGVAITDGDQDLMLFTSAGKAVRF 708
Query: 716 NENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHN 775
+E+ VRAMGR+A GV G++L+ Q+VI+L+V + +VL+ TENGYGKRT + ++
Sbjct: 709 SEDQVRAMGRTAHGVRGVKLQPDQRVISLVVP--EPGTVLSVTENGYGKRTTVDQFPTKG 766
Query: 776 RGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILI 835
RGT+G+I+I+T++RNG+ V A LV EIMLIT G LIRT V EI +GR QGV LI
Sbjct: 767 RGTQGVIAIRTSERNGEQVGAVLVLPGDEIMLITEHGTLIRTSVDEIPVVGRDAQGVKLI 826
Query: 836 TVENKSKLCGVQRLCKI 852
+ + +L V+R+ +
Sbjct: 827 NLGDGERLAYVERVVAL 843
>gi|242238485|ref|YP_002986666.1| DNA gyrase subunit A [Dickeya dadantii Ech703]
gi|242130542|gb|ACS84844.1| DNA gyrase, A subunit [Dickeya dadantii Ech703]
Length = 878
Score = 981 bits (2537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/866 (54%), Positives = 635/866 (73%), Gaps = 10/866 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL DLDKET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + S+ L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIDDENISVEGLMTYIPGPDFPTAAIINGKRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADEKSGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQ+Q +FG+NM+AL GQPKL+ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKLMTLKEILAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR STP +AK ++ W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAVALVNIDPIIELIRHASTPADAKAALVAQAWELGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGIRDGK-YHLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ L IL + +R++E+I +EL IK +Y RR+EI N+ + + EDLI+
Sbjct: 480 ELLTQIAALLFILRSPERLMEVIREELEAIKEQYNDQ----RRTEITHNSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I+QL +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDQLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWLKVYQLPEASRGARGRPIINLLPLEQNERITAILPV----REYEEGLNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LTDGS ++MLFS GK VRF+E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFSESAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+ L+ +V++L+V + +LT TENGYGKRT I +Y +R TKG
Sbjct: 712 RTMGRTATGVRGINLQDDDRVVSLIVPRGEG-DILTVTENGYGKRTAINDYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI +
Sbjct: 771 VISIKVSERNGNVVGAVQVDTTDQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEE 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDG 866
++ G+QR+ + + V+ +DG
Sbjct: 831 ERVVGLQRVAEPVEDDELDGVVAVDG 856
>gi|350551878|ref|ZP_08921088.1| DNA gyrase, A subunit [Thiorhodospira sibirica ATCC 700588]
gi|349795808|gb|EGZ49601.1| DNA gyrase, A subunit [Thiorhodospira sibirica ATCC 700588]
Length = 866
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/849 (54%), Positives = 629/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M QFA+E+ + LE+EM +SYLDYAMSVI+GRALPD RDGLKPVHRRVLFAMH++ N WN
Sbjct: 1 MAQFAEEIFPVNLEDEMRQSYLDYAMSVIIGRALPDARDGLKPVHRRVLFAMHDLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD ++YD LVRMAQ FS+R LVDGQGNFGS+DGDS AAM
Sbjct: 61 KAYKKSARIVGDCIGKYHPHGDTAVYDTLVRMAQPFSMRYMLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL D+DKET+DF+ NYDG E EPSVLPTR+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMARIAHELLADIDKETVDFVDNYDGSESEPSVLPTRVPNLLVNGSTGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI + ++ PE SI +L+ +P PDFPTAGII G +HD Y++G+GR+
Sbjct: 181 NIPPHNLNEVISACIALIDQPELSIAELMAHLPGPDFPTAGIINGAQGIHDAYHSGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+THIE ++ R AII+ ELPYQVNK L EKI++LVK+KKLE IS LRDESDK G
Sbjct: 241 YVRARTHIETQDKTGRQAIIVTELPYQVNKARLQEKIAELVKDKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IELKR E+ ++VLN LY+ TQ+QN FG+NM+AL++GQP+ LNLK+ L F+ HR+E
Sbjct: 301 MRIYIELKRGELADVVLNNLYQHTQMQNVFGINMVALLDGQPRTLNLKQCLEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRK+RE AH+LEGL +AL NID I +I+ + P +A+ ++ W V
Sbjct: 361 VVTRRTVYTLRKSRERAHLLEGLAVALANIDAVIALIKQATGPAQAREALLAQGWRPGVV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + ++ L ++ Y LS+ QAQ IL + L RLT +EQ K+I +Y+
Sbjct: 421 TDLLARAGAYASRPEGLDAGLGLHDSSYY-LSEAQAQAILDLRLHRLTGLEQDKVIGEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ DL +IL + R++ +I +EL I+ ++G ++RR+EI+ + EDLI
Sbjct: 480 ELLERIRDLLEILEHPPRLLAVIREELEAIRAQFG----DVRRTEIVASQHALQLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY K QP+++YRAQ+RGGRGK A +DED+I++L + NTHD ILCFS+
Sbjct: 536 EEDVVVTLSHAGYAKYQPLTDYRAQRRGGRGKSATTVRDEDFIDRLVVTNTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ YWLKV+++PQGSR +RGKPI+N+ L++ E++ ILP+ R + ++ +VFM+T
Sbjct: 596 RGKAYWLKVYELPQGSRTARGKPIVNLLPLEDGERVNAILPV----RTYSEDLFVFMATQ 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIAV+L +ED L+ LTDG DIML + +GKAVRF+E V
Sbjct: 652 KGTVKKTPLVEFSRPRSNGIIAVDLRDEDQLVDVQLTDGQRDIMLLTSAGKAVRFSEGEV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G+R++ + KVI+LL + +VL AT NGYGKRT ++E+ RGT+G
Sbjct: 712 RAMGRTATGVRGVRMQPQDKVISLLTV--AEGTVLIATANGYGKRTPVEEFPCKGRGTQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+IK ++RNG VV ATLVN+ E+MLIT G L+RT V++I + R+TQGV LI +
Sbjct: 770 VIAIKPSERNGPVVGATLVNQDDEMMLITDAGTLVRTPVADISVISRNTQGVRLIRLSAG 829
Query: 841 SKLCGVQRL 849
+L + R+
Sbjct: 830 ERLVELARI 838
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 651 KNNYVFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDFLIGAALTDGSYDIMLFSD 708
+ + V + G K L+++ R+ G A + +EDF+ +T+ I+ FS
Sbjct: 536 EEDVVVTLSHAGYAKYQPLTDYRAQRRGGRGKSATTVRDEDFIDRLVVTNTHDTILCFSS 595
Query: 709 SGKAVRFNENSVRAMGRSARG---VIGMRLEKKQKVIALLVSNNQKQS--VLTATENGYG 763
GKA + R+ARG V + LE ++V A+L + V AT+ G
Sbjct: 596 RGKAYWLKVYELPQGSRTARGKPIVNLLPLEDGERVNAILPVRTYSEDLFVFMATQKGTV 655
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
K+T + E+++ + GII++ + ++V L + +IML+T+ G +R E+R
Sbjct: 656 KKTPLVEFSRPR--SNGIIAVDLRDED-QLVDVQLTDGQRDIMLLTSAGKAVRFSEGEVR 712
Query: 824 KMGRSTQGVILITVENKSKLCGVQRLCKITMI 855
MGR+ GV + ++ + K+ + + + T++
Sbjct: 713 AMGRTATGVRGVRMQPQDKVISLLTVAEGTVL 744
Score = 47.8 bits (112), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 528 LNAINP---STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWIN 584
+NAI P +EDL V + G +K P+ E+ + G A+ +DED +
Sbjct: 631 VNAILPVRTYSEDL-----FVFMATQKGTVKKTPLVEFSRPR--SNGIIAVDLRDEDQLV 683
Query: 585 QLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSN 644
+ + + I+ ++ G+ ++ R + G + ++ ++K+ +L ++
Sbjct: 684 DVQLTDGQRDIMLLTSAGKAVRFSEGEVRAMGRTATG---VRGVRMQPQDKVISLLTVAE 740
Query: 645 NKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSY 701
V ++T+ G K+T + F + G+IA+ S + ++GA L +
Sbjct: 741 GT--------VLIATANGYGKRTPVEEFPCKGRGTQGVIAIKPSERNGPVVGATLVNQDD 792
Query: 702 DIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNN 749
++ML +D+G VR + + R+ +GV +RL ++++ L +N
Sbjct: 793 EMMLITDAGTLVRTPVADISVISRNTQGVRLIRLSAGERLVELARIDN 840
>gi|431930680|ref|YP_007243726.1| DNA gyrase subunit A [Thioflavicoccus mobilis 8321]
gi|431828983|gb|AGA90096.1| DNA gyrase, A subunit [Thioflavicoccus mobilis 8321]
Length = 859
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/854 (53%), Positives = 653/854 (76%), Gaps = 15/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKEV+ I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MPEFAKEVLPINLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ LL DLDKET+DF+ NYD E EP+VLP R PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIAHTLLDDLDKETVDFVPNYDNTENEPAVLPARFPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E+I L ++ NP +I++L+ +P PDFPTAG+I G+ + +GY TG+GR+
Sbjct: 181 NIPPHNLGEIIAACLALIDNPLMTIDELMAHVPGPDFPTAGLINGVRGIREGYRTGRGRL 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+TH E R R AI++ ELPYQVNK LL++I++LVK+K+LE I+ LRDESDK G
Sbjct: 241 FMRARTHTEIEKRSGREAIVVTELPYQVNKARLLKQIAELVKDKRLEGIAELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIELKR++ PEI++N LY+ TQ+Q FG+NM+ALV+GQP+LLNLK++L YF+ HR++
Sbjct: 301 MRIVIELKRDQSPEILVNNLYQHTQMQQVFGINMVALVDGQPRLLNLKQMLEYFLRHRRD 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AH+LEGL +AL N+D I +IR+ ++P EAK ++ W
Sbjct: 361 VVTRRTLFELRKARDRAHVLEGLAVALANLDEVIALIRAAASPAEAKAGLMGRAWR---P 417
Query: 421 SKIIGFNKKNYNTISKINNISK--LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++G ++ ++ +++ D Y+LS+ QAQ IL + L RLT +EQ+KI+ +
Sbjct: 418 GAVMGMLERTGAAETRPEDLAVGLGLGPDGYRLSEAQAQAILDLRLHRLTGLEQEKILKE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
+E+++ K+ +L ILS+ +R++++I DEL I++++G + RR+EI+++ ++ + EDL
Sbjct: 478 FEDILAKIAELLAILSSPERLMQVIRDELVAIRDQFG----DARRTEILIDQLDLTLEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+T+S+LGY+K+QP++EY+AQ+RGG+G+ A KDED+I+++F+AN+HD +LCF
Sbjct: 534 IAPEDVVVTMSHLGYVKAQPLTEYQAQRRGGKGRSATAVKDEDFIDRVFVANSHDTVLCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YWLKV+++PQ SR +RG+PI+N+ L+ E+I +LP+ R + + YVFM+
Sbjct: 594 SSRGRVYWLKVYELPQASRVARGRPIVNLIPLEEGERINAVLPV----RGYEEGYYVFMA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L +FS P GIIA++L ++++LIG A+TDG+ D+MLFS +GKAVRF E
Sbjct: 650 TSAGTVKKTPLKDFSRPLARGIIAIDLRDDEYLIGVAITDGNQDLMLFSSAGKAVRFREE 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
+VR M R+A GV G++L++ Q+VIALLV+ + +VLT TE GYGKRT ++++ RGT
Sbjct: 710 AVRPMSRTAHGVRGIQLDEGQQVIALLVA--EPGTVLTVTEKGYGKRTKVEDFPTKGRGT 767
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG+ISI+T++RNG V+A LV EIM+IT GG L+RT V + GRS+QGV LI +
Sbjct: 768 KGVISIRTSERNGAQVSAVLVRPEDEIMVITVGGTLVRTAVEGVPIHGRSSQGVRLIHLG 827
Query: 839 NKSKLCGVQRLCKI 852
+ ++ V+R+ +
Sbjct: 828 DGERVAYVERIVAL 841
>gi|254446975|ref|ZP_05060442.1| DNA gyrase, A subunit [gamma proteobacterium HTCC5015]
gi|198263114|gb|EDY87392.1| DNA gyrase, A subunit [gamma proteobacterium HTCC5015]
Length = 867
Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/852 (54%), Positives = 633/852 (74%), Gaps = 18/852 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKEV I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MADFAKEVFPINLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KSYKKSARIVGDVIGKYHPHGDSAVYDTMVRMAQDFSMRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++E+L D+DKET+DF+ NYDG E EP+V PTR+P LL+NG SGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHEMLADIDKETVDFVDNYDGSESEPTVFPTRLPALLVNGGSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EVIDG + ++ PE + L++ IP PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNINEVIDGCVALIDEPELDVMGLMEHIPGPDFPTAGIINGARGIREAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +EE ++ + I++ E+PYQVNK LLEKI++LVKEKK+E I+ LRDESDK G
Sbjct: 241 YMRARASVEE-DKNGKPYIVVTEIPYQVNKARLLEKIAELVKEKKIEGITGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E+ E++LN LY QTQLQ FG+NM+AL GQP+L+NLK++L FI HR+E
Sbjct: 300 MRIVIELRRGEVGEVILNNLYAQTQLQTVFGINMVALDKGQPRLMNLKQVLEAFIAHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE HILEGL +AL+NID I +I++++ P EA+ ++I++ W V
Sbjct: 360 VVTRRTLYELRKARERTHILEGLAVALSNIDPIIAMIKASTNPAEARQQLIDTVWEPGVV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G + +T+ + + L +D Y LS QAQ IL + L RLT +EQ KI+
Sbjct: 420 SGMLERAGADATRPDTLE--DGLGLL--DDGYHLSPAQAQAILDLKLHRLTGLEQDKIVE 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y +++K+ +L +IL N R+ E++ DEL +++ YG RR+EI N + + ED
Sbjct: 476 EYGELLEKIAELLNILRNPDRLTEVVRDELVELRDSYGDE----RRTEIYQNQSDLTVED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI QD+V+TLS+ GY K+QP+ +Y+AQKRGGRG+ A KDED+I +LF+A THD +LC
Sbjct: 532 LINEQDVVVTLSHAGYAKAQPLDDYKAQKRGGRGRSATKMKDEDFIEKLFVACTHDTLLC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+YG++YW KV+++P GSRN+RGKPI+N+ L+ E+I+ +LP+ R+F + +VFM
Sbjct: 592 FSSYGKVYWKKVYELPIGSRNARGKPIVNLLPLEEGERISAVLPV----REFTDDEFVFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VK+T LSNFS PR +GIIA+++ + D L+G A TDG DIMLF+DSGKA+RFNE
Sbjct: 648 ATANGTVKRTALSNFSRPRSNGIIALDIRDGDRLVGVARTDGQRDIMLFADSGKAIRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VR MGR+A GV G+RL +Q ++ L++ + +LTAT NGYGKRT I++Y RG
Sbjct: 708 QDVRPMGRTAAGVRGIRLSDEQTMVGLIIVED--GDILTATVNGYGKRTAIEDYPTQGRG 765
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
G++SIKT+ RNG VV A V EIMLI+ GG+L+RT V +I M R+TQGV LI +
Sbjct: 766 GSGVLSIKTSDRNGGVVGAVQVATEDEIMLISNGGVLVRTAVEDISVMSRNTQGVRLIRL 825
Query: 838 ENKSKLCGVQRL 849
++K +L ++R+
Sbjct: 826 DDKEQLVELERI 837
>gi|85711597|ref|ZP_01042654.1| DNA gyrase subunit A [Idiomarina baltica OS145]
gi|85694457|gb|EAQ32398.1| DNA gyrase subunit A [Idiomarina baltica OS145]
Length = 879
Score = 980 bits (2533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/856 (54%), Positives = 641/856 (74%), Gaps = 19/856 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+EV I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MSDLAREVSPINIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELRNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+++LL DLDKET+DF+ NYDG E+ P VLPT++PNL++NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKIAHQLLADLDKETVDFVDNYDGTERIPDVLPTKVPNLMVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++ NPE SI +L++ IP PDFPTA I G S + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVINGTLALIDNPEISIEELMEFIPGPDFPTAASISGRSGIVEAYKTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R +II+ E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 HLRAKAEVEVDEKSGRESIIVSEIPYQVNKARLIEKIAELVKEKRLEGISGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE++R ++ E+VLN LY TQ+Q FG+NM+AL GQPKL NL ++L F+ HR+E
Sbjct: 301 MRIVIEIRRGDVGEVVLNHLYANTQMQVVFGINMVALDKGQPKLFNLYQVLDAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR+++ELRKARE AHILEGL I+L NID I++IR + TP EAK ++ W L +V
Sbjct: 361 VVTRRSVYELRKARERAHILEGLAISLANIDEVIELIRRSPTPAEAKQGLVARGWQLGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 421 AAMLESAGVDAARPEHLPEEYGI----RDGSYYLTEEQAQAILDLRLHKLTGLEHEKILD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++K++ +L IL +++R++E+I +EL I++ +G + R++EI A + S ED
Sbjct: 477 EYKGLLKQIEELLHILRSTERLMEVIREELVEIRDNFG----DARKTEITAAAHDISMED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP++EY AQ+RGG+GK A KD+D++ +L++ANTHD ILC
Sbjct: 533 LINEEDVVVTLSHEGYVKYQPLTEYEAQRRGGKGKAATKMKDDDFVERLWVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GR+YW+KV+Q+P SR SRGKPI+N+ L++ E+IT ILP RD+P++ +V M
Sbjct: 593 FSTRGRIYWMKVYQLPLASRASRGKPIVNLLPLESDERITAILP----TRDYPEDKFVIM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L +S PR GIIA+NL+ D LIG +TDG +IMLFSD GK VRF E
Sbjct: 649 ATKHGTVKKTPLPEYSRPRNGGIIALNLNEGDELIGVDITDGEQEIMLFSDGGKVVRFRE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLV----SNNQKQSVLTATENGYGKRTLIKEYTK 773
+ VR+MGR+A GV G+RLE+ QKV++L+V + Q+ ++LT TENG+GKRTL++EY
Sbjct: 709 DQVRSMGRTATGVRGIRLEEGQKVVSLIVPGTYEDEQQAAILTVTENGFGKRTLVEEYPT 768
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
+R TKG++SIK ++RNG VV A V +EIMLI+ G L+RTRV+E+ +GR+TQGV
Sbjct: 769 KSRATKGVVSIKVSERNGAVVGAMEVVDGNEIMLISNKGTLVRTRVNEVSMVGRNTQGVR 828
Query: 834 LITVENKSKLCGVQRL 849
LI + ++ G+QR+
Sbjct: 829 LIRTGDDEQVVGLQRI 844
>gi|381150451|ref|ZP_09862320.1| DNA gyrase, A subunit [Methylomicrobium album BG8]
gi|380882423|gb|EIC28300.1| DNA gyrase, A subunit [Methylomicrobium album BG8]
Length = 868
Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/849 (55%), Positives = 634/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +AKE+I + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSNYAKEIIPVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYMLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DLDKET+DFI NYD E EP VLPTRIP LLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKISHELLADLDKETVDFIPNYDESESEPKVLPTRIPALLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E + L ++ +PE +I +L++ +P PDFPTAGII G S ++ Y TG+G++
Sbjct: 181 NIPPHNLNETVGACLALIDHPEATILELMEHLPGPDFPTAGIINGASGIYSAYTTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ H E+ NR AII ELPYQVNK +L KI++LVKE ++E IS +RDESDK G
Sbjct: 241 YLRARCHFEDIGDSNRQAIIATELPYQVNKATLQMKIAELVKEGRIEGISAIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL+R E+PE+VLN LYKQTQ Q+ FG+NM+AL++G+P LLNLKEIL FI HR+E
Sbjct: 301 MRLVIELRRGEMPEVVLNNLYKQTQFQSVFGINMVALLDGRPHLLNLKEILNAFIDHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
++ RRTI+ LRKARE AHILEGL +AL NID I++I+++++P A+ ++ TWN V
Sbjct: 361 IVTRRTIYNLRKARERAHILEGLAVALANIDEMIELIKNSASPAVAREGLLARTWNSGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + + Y+LS+ QAQ IL + L RLT +EQ KII++Y+
Sbjct: 421 TSLLERADADRSRPEDLPPGFGIAGG-RYRLSEAQAQAILDLRLHRLTGLEQDKIIDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ + +IL + R++E++ +EL I++ Y ++ RR+EII + ++ S EDLI
Sbjct: 480 ELLRRIDEYLEILGSDIRLMEVVREELVEIRDNY----RDERRTEIIHDRLDLSEEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+T+S+ GY+K+QP+S+Y+AQ+RGGRGK A TK+ED++++L +AN+HD ILCFS+
Sbjct: 536 EEDMVVTMSHAGYVKAQPLSDYKAQRRGGRGKLATATKEEDFVDKLIVANSHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ YWLKV+Q+P SR SRGKP +N+ L+ EKI +LP+ R+F +N Y+FM+T+
Sbjct: 596 LGKAYWLKVYQLPIASRTSRGKPFVNLLPLEQGEKINAMLPV----REFSENKYIFMATT 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L F R G IA++L D L+G A+TDGS +++LFS GKAV FNE V
Sbjct: 652 AGTVKKTPLIEFERQRTGGKIAIDLQEGDRLVGCAITDGSQNVLLFSSDGKAVCFNETDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV GMRL + Q+VI+L++ + +VL TENGYGKRT ++E+ HNRG +G
Sbjct: 712 RPMGRNAAGVRGMRLAEGQQVISLIIGT--EGTVLNITENGYGKRTRLEEFPCHNRGGQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+T+ RNG VV A LVN + EIMLIT GG L+RT V I + R+TQGV +I ++ K
Sbjct: 770 VIAIQTSARNGAVVGAVLVNAHDEIMLITDGGTLVRTPVDGISVLSRNTQGVTIIRLDKK 829
Query: 841 SKLCGVQRL 849
K+ GV R+
Sbjct: 830 EKVIGVDRI 838
>gi|386814427|ref|ZP_10101645.1| DNA gyrase subunit A [Thiothrix nivea DSM 5205]
gi|386419003|gb|EIJ32838.1| DNA gyrase subunit A [Thiothrix nivea DSM 5205]
Length = 862
Score = 979 bits (2530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/869 (55%), Positives = 646/869 (74%), Gaps = 15/869 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE++ + LE+EM +SYL Y+MSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MATFAKEILPVNLEDEMRQSYLAYSMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTVVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL +D+DKET+DF+ NYDG EKEPSV PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELQLDIDKETVDFVPNYDGNEKEPSVFPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE ++ L +L + + I DL++ +P PDFPTAGII G + + Y+TGKGR+
Sbjct: 181 NIPPHNLTETVNAALALLADADMEIADLMEYLPGPDFPTAGIINGARGIREAYHTGKGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE R +R II+ ELPYQVNK LLEKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRARADIEVDERTSRETIIVTELPYQVNKARLLEKIAELVKEKKIEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E ++VLN LYKQTQ+Q+ FG+NM+ALV+GQP+LLNLKE+L F+ HR+E
Sbjct: 301 MRMVIELKRGESGDVVLNNLYKQTQMQSVFGINMVALVDGQPRLLNLKEVLEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
++ RRTIFE+RKARE AHILEGL IAL+NID+ I++I++ +P +AK ++ WN V
Sbjct: 361 IVTRRTIFEVRKARERAHILEGLAIALSNIDDIIELIKAAPSPADAKAGLLARAWNPGIV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
+ ++ + +T + ++ + D Y LS++QAQ IL + L RLT +E+ KI+ +Y
Sbjct: 421 TDML--TRSGADTCRPDDLPAQYGIHEDGYWLSEVQAQAILDLRLHRLTGLEKDKILAEY 478
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
++ K+ DL +IL+N R+I++I DEL +++ YG RR+EI + + S EDLI
Sbjct: 479 RELLDKIADLLEILANPDRLIQVIRDELLAVRDAYGDE----RRTEINVVGEDLSMEDLI 534
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +++++TLS+ GY KSQ + YRAQKRGGRGK A KDED+I +LF+A+THD ILCFS
Sbjct: 535 ADEEVMVTLSHEGYAKSQTLDTYRAQKRGGRGKAATSMKDEDFIEKLFVASTHDTILCFS 594
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YWLKV+Q+P G R +RGKP++N+ L+ E+I +LP+ R++ ++ YVFM+T
Sbjct: 595 SRGRMYWLKVYQLPVGGRGARGKPMVNLLPLEEGERINAVLPI----REYAEDKYVFMAT 650
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
S G VKKT L+ FS PR +GIIAV+L + D L+ A+T+G D+MLFS SGKA+RF+E+
Sbjct: 651 SNGTVKKTPLTEFSRPRTAGIIAVDLRDGDKLVDVAVTNGDNDVMLFSTSGKAIRFHESD 710
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+A GV G+RLE+ Q+V AL++ + +L ATENGYGKRT + E++ RG +
Sbjct: 711 VRAMGRTATGVRGIRLEEGQEVNALIIVG--EGELLIATENGYGKRTRVDEFSTQGRGGQ 768
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I+T++RNG + A V +IMLIT GG L+RT V+++ +GR+TQGV LI +
Sbjct: 769 GVIAIQTSERNGDSIGAVQVRDECQIMLITDGGTLVRTPVADVSIVGRNTQGVTLIRLNA 828
Query: 840 KSKLCGVQRLCKITMIKKYIPVITIDGPT 868
KL VQ +T +P D PT
Sbjct: 829 GEKL--VQIAPILTENSDDLPEGDEDSPT 855
>gi|73760122|dbj|BAE19968.1| DNA gyrase subunit A [Photobacterium damselae subsp. piscicida]
Length = 874
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/852 (55%), Positives = 636/852 (74%), Gaps = 16/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEEELKGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+K+T+D++ NYDG E P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLEKDTVDYVPNYDGTEHIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N E +I+ L++ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEEITIDQLMEYIPGPDFPTAAMISGRKGIIDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIEVEDKNGKETIIVTEIPYQVNKARLIEKIAELVKEKKVEGISRLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 301 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVNHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL +AL NID I++IR TP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLALALANIDEIIELIRRAPTPAEAKAGLVARGWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + +++ I +++Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 421 AAMLERAGTDAARPDWLAEEFGI----RDNLYYLTEQQAQAILDLRLHKLTGLEHEKILD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L ILS+++R++E+I +EL ++K ++ + RR+EI + ED
Sbjct: 477 EYKALLEEIAELLHILSSAERLMEVIREELELVKEQF----NDARRTEITAATHDIDLED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K Q +++Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 533 LINQEDVVVTLSHEGYVKYQVLTDYEAQRRGGKGKAATRMKDEDFIERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GR+YWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ +++ + +VFM
Sbjct: 593 FSTRGRMYWLKVYQLPLASRTARGKPIVNILPLEENERITAILPV----KEYEADKFVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L++FS PR +GIIAVNL NED LIG +TDG+ DIMLFS +GK VRFNE
Sbjct: 649 ATADGTVKKTPLTDFSRPRSAGIIAVNLRNEDTLIGVDITDGNNDIMLFSKAGKVVRFNE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VRAMGR+A GV G++L + V++L+V +N VLT TENGYGKRT ++EY +R
Sbjct: 709 GQVRAMGRTAAGVRGIKLAESDNVVSLIVPHNDG-DVLTVTENGYGKRTELEEYPAKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E M+IT GG L+RTRV E+ ++GR+TQGV LI
Sbjct: 768 TQGVVSIKVSERNGSVVGAVQVLEGDEFMMITNGGTLVRTRVREVSRVGRNTQGVTLIRT 827
Query: 838 ENKSKLCGVQRL 849
+ K+ G+QR+
Sbjct: 828 TEEEKVVGLQRI 839
>gi|261855937|ref|YP_003263220.1| DNA gyrase subunit alpha [Halothiobacillus neapolitanus c2]
gi|261836406|gb|ACX96173.1| DNA gyrase, A subunit [Halothiobacillus neapolitanus c2]
Length = 864
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/854 (52%), Positives = 639/854 (74%), Gaps = 10/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++FA+E+ + LE+EM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSEFAQEIFKVNLEDEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMRELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YDALVRMAQ+FS+R L+DGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDALVRMAQNFSMRYMLIDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++EL DL+KET+DFI NYDG E EPSV P R PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKVAHELQADLEKETVDFIDNYDGSESEPSVFPARYPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++ + ++ +P+ L+ +P PDFPTAGII G + + + Y TG+GRV
Sbjct: 181 NIPPHNLTEILNATIALIDDPDTDDETLLSHVPGPDFPTAGIINGAAGIREAYLTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH EE +R + II+ ELPYQVNK L+E+I++LV+EKK+E I+ LRDESDK G
Sbjct: 241 VMRARTHFEEDDRAGKAIIIVTELPYQVNKARLIERIAELVREKKIEGITELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E+P+++LN LY+QTQ+Q+ FG+NM+A+V GQP+ L L++IL F+ HR+E
Sbjct: 301 MRIVIELRRGELPDVMLNNLYQQTQMQSVFGINMVAIVGGQPRTLGLRDILTVFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI++LRKARE AHILEGL +AL NID I +I++ T EA+ ++ W+ V
Sbjct: 361 VVTRRTIYDLRKARERAHILEGLAVALANIDAMIALIKAAPTSNEARTALMAQNWDSGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + LQ + Y+LS QAQ IL+M L RLT +EQ KI+ +Y
Sbjct: 421 HALLERADAAASRPESLTADFGLQPDRSYRLSQEQAQAILEMRLNRLTGLEQDKIVEEYR 480
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++++K+IDL DIL + R++++I DEL + ++G + RR+EI+ + + S EDLIA
Sbjct: 481 SLLEKIIDLLDILRSESRLMQVIRDELVAMIEEFG----DARRTEIVFDYEDLSIEDLIA 536
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+TLS GYIK+Q +SEY++Q+RGGRGK + KDED I QL +A+TH + L F+N
Sbjct: 537 EEDRVVTLSREGYIKTQSLSEYQSQRRGGRGKSSTRMKDEDVIEQLMVASTHAWALMFTN 596
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YW KV+Q+PQG+R +RG+P++N+ L+ E++ +LP+ R+F ++Y+F +T+
Sbjct: 597 LGRVYWRKVYQLPQGARGARGRPVVNILPLQEGERVNALLPV----REFVDDHYIFFATA 652
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +FS PR++GIIA++L ++D L+GA LTDGS ++MLFS++GK++RF E V
Sbjct: 653 TGQVKKTPLVDFSRPRQAGIIAIDLRDDDRLVGARLTDGSRELMLFSNAGKSIRFAEADV 712
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+R+++ Q+V++LLV + VLTATE+GYGKRT I ++ RG +G
Sbjct: 713 RSMGRTAGGVRGIRMDEMQRVVSLLVVGEGQ--VLTATEHGYGKRTPIDDFPLQGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+T++RNG +V A LV E++LI+ G L+RT +S+I + R+TQGVILI + +
Sbjct: 771 VIAIQTSERNGALVGAALVQDEDEVILISDAGTLVRTEISQISSVSRNTQGVILIRLSDD 830
Query: 841 SKLCGVQRLCKITM 854
KL + + +++
Sbjct: 831 EKLVQLAAVSAMSV 844
>gi|284009348|emb|CBA76530.1| DNA gyrase subunit A [Arsenophonus nasoniae]
Length = 881
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/850 (55%), Positives = 630/850 (74%), Gaps = 10/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 7 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 66
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YDA+VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 67 KAYKKSARVVGDVIGKYHPHGDSAVYDAIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 126
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DFI NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 127 RYTEVRMAKIAHELLADLDKETVDFIPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 186
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 187 NIPPHNLSEVIDGCLAYIDDENISIEGLLEYIPGPDFPTAAIINGRRGIIDAYRTGRGKV 246
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +IE ++ R II++E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 247 YIRARANIEVDDKNGRETIIVNEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 306
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL +GQP+LLNLKEIL F+ HR+E
Sbjct: 307 MRIVIEVKRDAVAEVVLNNLYSLTQLQVSFGINMVALYDGQPRLLNLKEILEAFVRHRRE 366
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L +AL NID I++IR STP EAK +I W L +V
Sbjct: 367 VVTRRTIFELRKARERAHILEALAVALANIDPIIELIRQASTPNEAKLALIARPWQLGNV 426
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ N + ++ Y L++ QAQ IL + LQ+LT++E KI+++Y
Sbjct: 427 SAMLASAGDNAARPEWLEPQYGVREGQYY-LTEPQAQAILDLRLQKLTSLEHDKILDEYR 485
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++K++ L IL++ +R++E+I +EL +K +Y +++RR+EI N+ + + EDLI
Sbjct: 486 ELLKQIAALLYILTSPERLMEVIREELEAVKEQY----RDVRRTEITENSADINIEDLIN 541
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 542 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSS 601
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R+F +YVFM+T+
Sbjct: 602 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEQNERITAILPV----REFDDGHYVFMATA 657
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +FS PR +GIIAVNL+ D LIG LT G ++MLFS GK VRF EN+V
Sbjct: 658 SGTVKKTSLKDFSRPRSAGIIAVNLNEGDELIGVDLTAGKNEVMLFSAGGKVVRFAENAV 717
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G++L KV++L+V + +LT TENGYGKRT EY +R T+G
Sbjct: 718 RPMGRTATGVRGIKLHAGDKVVSLIVPRGEG-DILTVTENGYGKRTEQSEYPTKSRATQG 776
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V + +IM+IT G L+RTRV+E+ +GR+TQGV LI
Sbjct: 777 VISIKVSERNGNVVGAIQVEKTDQIMMITDAGTLVRTRVAEVSIVGRNTQGVTLIRTAED 836
Query: 841 SKLCGVQRLC 850
K+ G+QR+
Sbjct: 837 EKVVGLQRVV 846
>gi|292492652|ref|YP_003528091.1| DNA gyrase subunit alpha [Nitrosococcus halophilus Nc4]
gi|291581247|gb|ADE15704.1| DNA gyrase, A subunit [Nitrosococcus halophilus Nc4]
Length = 846
Score = 978 bits (2528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/851 (55%), Positives = 622/851 (73%), Gaps = 11/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + A+EV + +E+EM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MEEIAQEVFPVNIEDEMKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMQELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YDA+VRMAQ FS+R LVDGQGNFGSIDGD AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDAAVYDAIVRMAQPFSMRYPLVDGQGNFGSIDGDPPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYD E EP+VLPTRIPNLL NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLNKETVDFVPNYDESEYEPAVLPTRIPNLLANGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+ + ++ +P I ++ IP PDFPTAGI+ G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVLSACIALIDDPSLDIAGIMAHIPGPDFPTAGIVNGSRGIQEAYLTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+TH+E R +II+ ELPY VNK LLEKI +LVKEKK+E I LRDESDK G
Sbjct: 241 FLRARTHVETDEASGRQSIIVTELPYMVNKARLLEKIGELVKEKKIEGIVGLRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+V+EL+RNE+PE+VLN LY TQLQ FG+NM+ALV+GQP++LNLK L F+ HR+E
Sbjct: 301 MRMVVELRRNEMPEVVLNHLYLHTQLQTVFGINMVALVDGQPQVLNLKLALEAFLRHRQE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AH+LEGL IALTNID I +I+++S+P EA++ +I +W V
Sbjct: 361 VVTRRTVFELRKARERAHVLEGLAIALTNIDPVIALIKASSSPSEARDGLIARSWPPGVV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + + LQ Y+LS QAQ IL M L RLT +EQ KII++Y+
Sbjct: 421 IDMLQRAGAESSRPEGLEAVYGLQEGG-YRLSPAQAQAILDMRLHRLTGLEQGKIIDEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
VI+ + +L +IL+N +R++ +I +EL ++ +YG +RR+EI N ++ EDLI
Sbjct: 480 QVIELISELLEILANPERLMAVIREELVEMRQQYG----ELRRTEIQYNHVDLRLEDLIQ 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++V+TLS+ GY K Q + YR+QKRGG+GK A K+ED+I++LFIANTHD +LCFS+
Sbjct: 536 EENVVVTLSHTGYAKYQALDAYRSQKRGGKGKSATAMKEEDFIDKLFIANTHDTLLCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YW KV+++PQG+R +RGKPI+N+ L+ E+I +LP+ R+F + YVFM T+
Sbjct: 596 RGKVYWKKVYELPQGTRTARGKPIVNLLPLEEGERINTVLPI----REFEEGKYVFMVTA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L+ FS PR SGIIA+ L D L+GA LTDG +IMLFS GK +RF+E V
Sbjct: 652 SGVVKKTSLAVFSRPRPSGIIALELREGDQLVGADLTDGEQEIMLFSSGGKVIRFSEQKV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV GM L + +VIAL+++ N ++LTATE GYGKRT I EY RG +G
Sbjct: 712 RPMGRTARGVKGMELPPEHRVIALIIARN--GTILTATELGYGKRTAIAEYRLQGRGGQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
IISI+T RNG+VV A V EI+LIT G LIRT V +I MGR+TQGV LI +
Sbjct: 770 IISIQTTPRNGQVVGAVQVEEEDEIVLITNRGTLIRTPVCDISLMGRNTQGVKLINLLEG 829
Query: 841 SKLCGVQRLCK 851
+L GV+R+ +
Sbjct: 830 ERLVGVERIVE 840
>gi|307129982|ref|YP_003881998.1| DNA gyrase subunit A [Dickeya dadantii 3937]
gi|306527511|gb|ADM97441.1| DNA gyrase subunit A [Dickeya dadantii 3937]
Length = 877
Score = 978 bits (2528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/869 (54%), Positives = 640/869 (73%), Gaps = 16/869 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLSDLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + S+ L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIDDENISVEGLMTHIPGPDFPTAAIINGKRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQ+Q +FG+NM+AL GQPKL+ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKLMTLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR STP +AK ++ W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRHASTPADAKAALVAQAWALGGV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I ++ Y L+++QAQ IL + LQ+LT +E +K+++
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGI----HDGYYHLTELQAQAILDLRLQKLTGLEHEKLLD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL + +R++E+I +EL I+ +Y + RR+EI N+ + + ED
Sbjct: 477 EYKELLAQIAELLFILRSPERLMEVIREELVAIREQY----NDARRTEITHNSADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI+ +++V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILC
Sbjct: 533 LISQENVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + VFM
Sbjct: 593 FSSRGRLYWLKVYQLPEASRGARGRPIINLLPLEPDERITAILPV----REYEEGMNVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L+ FS PR +GIIAVNL++ D LIG LTDGS ++MLFS GK VRF+E
Sbjct: 649 ATASGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFSE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
++VR MGR+A GV G+ L+ +V++L+V + +LT T+NG+GKRT + EY +R
Sbjct: 709 SAVRTMGRTATGVRGINLQDDDRVVSLIVPRGEG-DILTVTQNGFGKRTAVTEYPVKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
TKG+ISIK ++RNGKVV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 768 TKGVISIKVSERNGKVVGAVQVDSADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRT 827
Query: 838 ENKSKLCGVQRLCKITMIKKYIPVITIDG 866
++ G+QR+ + + V+ +DG
Sbjct: 828 AEDEQVVGLQRVAEPVEDDELDSVVPVDG 856
>gi|269102944|ref|ZP_06155641.1| DNA gyrase subunit A [Photobacterium damselae subsp. damselae CIP
102761]
gi|268162842|gb|EEZ41338.1| DNA gyrase subunit A [Photobacterium damselae subsp. damselae CIP
102761]
Length = 873
Score = 978 bits (2528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/852 (55%), Positives = 637/852 (74%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEEELKGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+D++ NYDG E P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKDTVDYVPNYDGTEHIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N E +I+ L++ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEEITIDQLMEYIPGPDFPTAAMISGRKGIIDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ R II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIEA-DKNGRETIIVTEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVNHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL +AL NID I++IR TP EAK ++ W L +V
Sbjct: 360 VVTRRTIFELRKARDRAHILEGLALALANIDEIIELIRRAPTPAEAKAGLVARGWELGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + +++ I +++Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPDWLAEEFGI----RDNLYYLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L ILS+++R++E+I +EL ++K ++ + RR+EI + ED
Sbjct: 476 EYKTLLEEIAELLHILSSAERLMEVIREELELVKEQF----NDARRTEITAATHDIDLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K Q +++Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LINQEDVVVTLSHEGYVKYQVLTDYEAQRRGGKGKAATRMKDEDFIERLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GR+YWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ +++ + +VFM
Sbjct: 592 FSTRGRMYWLKVYQLPLASRTARGKPIVNILPLEENERITAILPV----KEYEADKFVFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L++FS PR +GIIAVNL +ED LIG +TDG+ DIMLFS +GK VRFNE
Sbjct: 648 ATADGTVKKTPLTDFSRPRSAGIIAVNLRDEDTLIGVDITDGNNDIMLFSKAGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VRAMGR+A GV G++L + V++L+V +N VLT TENGYGKRT ++EY +R
Sbjct: 708 GQVRAMGRTAAGVRGIKLAESDNVVSLIVPHNDG-DVLTVTENGYGKRTELEEYPAKSRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E M+IT GG L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGSVVGAVQVLEGDEFMMITNGGTLVRTRVAEVSRVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
K+ G+QR+
Sbjct: 827 TEDEKVVGLQRI 838
>gi|340000019|ref|YP_004730902.1| DNA gyrase subunit A [Salmonella bongori NCTC 12419]
gi|339513380|emb|CCC31130.1| DNA gyrase subunit A [Salmonella bongori NCTC 12419]
Length = 878
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAALVAQPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +++ ++G + RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLQILGSADRLMEVIREELELVREQFG----DARRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDEDIA 863
>gi|330445625|ref|ZP_08309277.1| DNA gyrase, A subunit [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489816|dbj|GAA03774.1| DNA gyrase, A subunit [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 876
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/849 (55%), Positives = 633/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPINIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L +++ + +I+ L++ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYINDEDITIDQLMEYIPGPDFPTAAMISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE ++ + I++ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRAKAEIEA-DKNGKETIVVHEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPK+ NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKIFNLKEMLKCFVNHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKAR+ AHILEGL +AL NID I+++R TP EAK +I W+L +V
Sbjct: 360 VVTRRTIYELRKARDRAHILEGLALALANIDEIIELVRRAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++N Y L++ QAQ IL + L +LT +E +KI+ +Y+
Sbjct: 420 AAMLERAGTDAARPEWLEAQFGIRDNQYY-LTEQQAQAILDLRLHKLTGLEHEKILEEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L ILS+S+R++E+I +EL ++K ++ + RR+EI + + EDLI
Sbjct: 479 ALLDEIAELMHILSSSERLMEVIREELELVKEQF----SDARRTEITAASHDIDMEDLIT 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQILSDYEAQRRGGKGKAATRMKEEDFIERLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 595 RGRMYWLKVYQLPLASRTARGKPIVNILPLEENERITAILPV----REYEADKFVFMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIAVNL +ED LIG +TDG DIMLFS +GK VRF+E V
Sbjct: 651 DGTVKKTPLTDFSRPRSAGIIAVNLRDEDTLIGVDITDGQNDIMLFSKAGKVVRFSEEQV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G++L + KV++L+V +N+ VLT TENGYGKRT + EY +R T+G
Sbjct: 711 RGMGRTAAGVRGIKLAESDKVVSLIVPHNEG-DVLTVTENGYGKRTELAEYPAKSRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A E M+IT GG L+RTRV+E+ ++GR+TQGV LI
Sbjct: 770 VVSIKVSERNGSVVGAVQAEDGDEFMMITNGGTLVRTRVAEVSRVGRNTQGVTLIRTAED 829
Query: 841 SKLCGVQRL 849
++ G+QR+
Sbjct: 830 EQVVGLQRI 838
>gi|300112890|ref|YP_003759465.1| DNA gyrase subunit A [Nitrosococcus watsonii C-113]
gi|299538827|gb|ADJ27144.1| DNA gyrase, A subunit [Nitrosococcus watsonii C-113]
Length = 846
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/851 (55%), Positives = 630/851 (74%), Gaps = 11/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A+EV + +E+EM SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MDEIAQEVFPVNIEDEMKHSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMRELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YDA+VRMAQ FS+RC L+DGQGNFGSIDGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDAAVYDAIVRMAQLFSMRCPLIDGQGNFGSIDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYD E EP+VLP RIPNLL NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLNKETVDFVPNYDESEHEPAVLPARIPNLLANGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E+++ + ++ +P SI L+ IP PDFPTAGI+ G+ + + Y TG+GR+
Sbjct: 181 NIPPHNLGELLNACIALIDDPALSIAGLMAHIPGPDFPTAGIVNGIRGIQEAYLTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+TH+E + +II+ ELPY VNK LLEKI LVK+KK+ I LRDESDK G
Sbjct: 241 VMRARTHVETDEGSGKQSIIVTELPYMVNKARLLEKIGNLVKDKKIVGIVGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+V+EL+R+E+PE+VLN+LY TQLQ+ FG+NM+ALV+GQP+LLNLK L F+ HR+E
Sbjct: 301 MRMVVELRRSEMPEVVLNQLYLHTQLQSVFGINMVALVDGQPQLLNLKLALEVFLRHRQE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AH+LEGL IALTNID+ I +I+++S+P EA++ +I W V
Sbjct: 361 VVTRRTMFELRKARERAHVLEGLAIALTNIDSMIALIKASSSPAEARDGLIARFWPPGVV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + ++ LQ D Y+LS QAQ IL+M L RLT +EQ KII++YE
Sbjct: 421 IDMLQRAGAASSPPEELEAAYGLQ-RDGYRLSPAQAQAILEMRLHRLTGLEQSKIIDEYE 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
VI + +L +IL+N +R++ +I +EL + +Y + RR+EI N ++ EDLI
Sbjct: 480 QVIIFISELLEILANPERLMAVIREELMEMLEQYSAP----RRTEIQDNYVDLRLEDLIQ 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++V+TLS+ GY KSQ + YR+QKRGG+GK A K+ED+I++LFIANTHD +LCFS+
Sbjct: 536 EENVVVTLSHSGYAKSQTLDTYRSQKRGGKGKSATAMKEEDFIDKLFIANTHDTLLCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YW KV+++PQGSR +RGKP +N+ L+ E+I +L + R+F K+ Y+FM T+
Sbjct: 596 RGKVYWKKVYELPQGSRIARGKPFVNLLPLEEGERINTVLSI----REFEKDKYIFMVTA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
LG+VKKT L++FS PR SGIIA++L D L+GA LTDG +IMLFS GK +RF+E V
Sbjct: 652 LGVVKKTSLADFSRPRSSGIIALDLREGDQLVGADLTDGEQEIMLFSSGGKVIRFSERDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R +GR+ARGV GM L K +VIAL+++ + ++LTATE GYGKRT I EY RG KG
Sbjct: 712 RPLGRTARGVKGMELPSKHRVIALIIAAS--GTILTATELGYGKRTAIAEYRLQGRGGKG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
IISI+T RNG VV A V + E++LI+ GG LIRT V I MGR+TQGV LI ++
Sbjct: 770 IISIRTTPRNGAVVGAVQVEKEDEVVLISNGGTLIRTPVDNISLMGRNTQGVKLINLQEG 829
Query: 841 SKLCGVQRLCK 851
+L G++R+ +
Sbjct: 830 ERLVGIERIVE 840
>gi|441502286|ref|ZP_20984297.1| DNA gyrase subunit A [Photobacterium sp. AK15]
gi|441430033|gb|ELR67484.1| DNA gyrase subunit A [Photobacterium sp. AK15]
Length = 878
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/849 (54%), Positives = 638/849 (75%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEEELKGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLEKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L +++ + +I+ L++ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINDEDITIDQLMEYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E ++ + I++ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADI-EADKNGKETIVVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL +GQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALADGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL +AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARDRAHILEGLALALANIDEIIELIKNAPTPAEAKAGLVARGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++N Y L++ QAQ IL + L +LT +E +KI+ +Y+
Sbjct: 420 AAMLERAGTDAARPEWLEEQYGIRDNKYY-LTEQQAQAILDLRLHKLTGLEHEKILGEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L ILS+S+R++E+I +EL ++K ++ + RR+EI + + EDLI
Sbjct: 479 TLLEEIAELLHILSSSERLMEVIREELELVKEQF----NDARRTEITAASHDIDLEDLIN 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQVLSDYEAQRRGGKGKAATRMKDEDFIERLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YWLKV+Q+P +R +RGKPI+N+ L+ E+IT ILP+ +++ ++ +VFM+T+
Sbjct: 595 RGRMYWLKVYQLPHATRTARGKPIVNILPLEEDERITAILPV----KEYEEDKFVFMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIAVNL + D LIG LTDGS DIMLFS +GK VRF+E+ V
Sbjct: 651 DGTVKKTPLTDFSRPRSAGIIAVNLRDGDSLIGVDLTDGSDDIMLFSSAGKVVRFSEDQV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G++L + +V++L+V N+ VLT TENGYGKRT + EY +R T+G
Sbjct: 711 RGMGRTAAGVRGIKLAENDQVVSLIVPQNEG-DVLTVTENGYGKRTELSEYPTKSRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V E M+IT GG L+RTRV+E+ ++GR+TQGV LI +
Sbjct: 770 VVSIKVSERNGSVVGAVQVEEGDEFMMITNGGTLVRTRVAEVSRVGRNTQGVTLIRTADD 829
Query: 841 SKLCGVQRL 849
++ G+QR+
Sbjct: 830 EQVVGLQRI 838
>gi|381394202|ref|ZP_09919920.1| DNA gyrase subunit A [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330474|dbj|GAB55053.1| DNA gyrase subunit A [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 894
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/912 (53%), Positives = 666/912 (73%), Gaps = 28/912 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MTDNANAISPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQTFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET++F+ NYDG+E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLDKETVNFVPNYDGQEHIPEVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G + ++ NP+ SI +LI+ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCIELIKNPDISIEELIEFIPGPDFPTAAIISGRAGIISAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +IE+ + II+ E+PYQVNK L+EK+++LVKEKK+E IS LRDESDK G
Sbjct: 241 YLRAKANIEQ-EENGKETIIVHEIPYQVNKARLIEKMAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KRNE E++LN LY QTQLQ FG+NM+AL QPK+ NLKEIL F+LHR+E
Sbjct: 300 MRIVIEVKRNESAEVLLNHLYSQTQLQTVFGINMVALDKTQPKIFNLKEILELFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++EL+KAR+ AHILEGL IAL NID I +I+++ +P EAK +I S W+L DV
Sbjct: 360 VVTRRTVYELKKARDRAHILEGLAIALVNIDPIIALIKASGSPAEAKKSLIVSGWDLGDV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++++ ++ N ++ + ++ + Y L++ QAQ IL + L +LT +E KI+ +
Sbjct: 420 AQML---ERAGNDAARPDWLADEYGIKDGKYYLTEEQAQAILDLRLNKLTGLEHDKILEE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y N+I+ + +L IL +S+R++EIIT+EL I++++G RR+EI + + EDL
Sbjct: 477 YRNLIEVIAELLKILGSSERLMEIITEELEAIRDEFGDE----RRTEITAASHDIDIEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KD+D+I +L +ANTHD+ILCF
Sbjct: 533 IEREEVVVTLSHEGYVKYQKLSDYEAQRRGGKGKSATKMKDQDFIEKLLVANTHDHILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F YVFM+
Sbjct: 593 STRGRLYWLKVYQLPLASRNARGRPIVNILPLEENERITAILPI----KEFEAGKYVFMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L ++S PR +GIIAVNL++ D LIG LTDG+ +IMLFS++GK VRF+E+
Sbjct: 649 TANGSVKKTELIHYSRPRANGIIAVNLNDGDELIGVDLTDGTCEIMLFSNAGKVVRFSED 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+A GV G+R+ ++V++L++ N +LTAT+NGYGK T + EY NR T
Sbjct: 709 QVRPMGRTATGVRGIRIADTERVVSLIIP-NADGDILTATQNGYGKCTAVSEYPAKNRAT 767
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG++SIK ++RNG+VV A V++ EIMLI+ G L+RTRVSE+ ++GR+TQGV LI
Sbjct: 768 KGVVSIKVSERNGQVVGAVQVSQTDEIMLISDRGTLVRTRVSEVSRVGRNTQGVTLIRTV 827
Query: 839 NKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVT 898
+ + G+QR+ ++ + VI D G V + +AS + +GA
Sbjct: 828 DGEHVVGLQRIDEVIEVDS--TVIETD-----EDGNVIEAIASDVDVQVGATGA------ 874
Query: 899 LSAINNNIQLDN 910
+A N+N + DN
Sbjct: 875 DAADNDNFENDN 886
>gi|389840221|ref|YP_006342305.1| DNA gyrase subunit A [Cronobacter sakazakii ES15]
gi|429121181|ref|ZP_19181824.1| DNA gyrase subunit A [Cronobacter sakazakii 680]
gi|387850697|gb|AFJ98794.1| DNA gyrase subunit A [Cronobacter sakazakii ES15]
gi|426324337|emb|CCK12561.1| DNA gyrase subunit A [Cronobacter sakazakii 680]
Length = 878
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/876 (54%), Positives = 643/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DLDKET+DF+ NYDG EK P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLDKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDPKNGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR TP EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRRAPTPSEAKAGLIAQAWELGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGIRDGK-YWLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRTAGIIAVNLNEGDELIGVDLTAGKDEVMLFSAQGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+RL + V++L+V + ++LTAT+NGYGKRT ++EY +R TKG
Sbjct: 712 RPMGRTATGVRGIRLGEGDSVVSLIVPRGEG-AILTATQNGYGKRTAVEEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTDRNGPVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDDIA 863
>gi|417791736|ref|ZP_12439166.1| DNA gyrase subunit A [Cronobacter sakazakii E899]
gi|449307509|ref|YP_007439865.1| DNA gyrase subunit A [Cronobacter sakazakii SP291]
gi|333954167|gb|EGL72039.1| DNA gyrase subunit A [Cronobacter sakazakii E899]
gi|449097542|gb|AGE85576.1| DNA gyrase subunit A [Cronobacter sakazakii SP291]
Length = 878
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/876 (54%), Positives = 643/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DLDKET+DF+ NYDG EK P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLDKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDPKNGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR TP EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRRAPTPSEAKAGLIAQAWELGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGIRDGK-YWLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRTAGIIAVNLNEGDELIGVDLTAGKDEVMLFSAQGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+RL + V++L+V + ++LTAT+NGYGKRT ++EY +R TKG
Sbjct: 712 RPMGRTATGVRGIRLGEGDSVVSLIVPRGEG-AILTATQNGYGKRTAVEEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTDRNGPVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDDIA 863
>gi|156933159|ref|YP_001437075.1| DNA gyrase subunit A [Cronobacter sakazakii ATCC BAA-894]
gi|156531413|gb|ABU76239.1| hypothetical protein ESA_00969 [Cronobacter sakazakii ATCC BAA-894]
Length = 878
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/876 (54%), Positives = 643/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DLDKET+DF+ NYDG EK P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLDKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDPKNGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR TP EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRRAPTPSEAKAGLIAQAWELGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGIRDGK-YWLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRTAGIIAVNLNEGDELIGVDLTAGKDEVMLFSAQGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+RL + V++L+V + ++LTAT+NGYGKRT ++EY +R TKG
Sbjct: 712 RPMGRTATGVRGIRLGEGDSVVSLIVPRGEG-AILTATQNGYGKRTAVEEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTDRNGPVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDDIA 863
>gi|397659115|ref|YP_006499817.1| DNA gyrase subunit A [Klebsiella oxytoca E718]
gi|394347334|gb|AFN33455.1| DNA gyrase subunit A [Klebsiella oxytoca E718]
Length = 877
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 648/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVENEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEI+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALIARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +++ ++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELVREQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + KV++L+V + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDKVVSLIVPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDEDIA 863
>gi|345300121|ref|YP_004829479.1| DNA gyrase subunit A [Enterobacter asburiae LF7a]
gi|345094058|gb|AEN65694.1| DNA gyrase, A subunit [Enterobacter asburiae LF7a]
Length = 878
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/876 (53%), Positives = 645/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKASLIARPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYAEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIVPRGEG-AILTVTQNGYGKRTAETEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDTDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSAAEGDDEIA 863
>gi|419958242|ref|ZP_14474307.1| DNA gyrase subunit A [Enterobacter cloacae subsp. cloacae GS1]
gi|388606925|gb|EIM36130.1| DNA gyrase subunit A [Enterobacter cloacae subsp. cloacae GS1]
Length = 878
Score = 975 bits (2521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 648/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKASLVARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELELVRDQFGDE----RRTEITANSSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 REDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIVPRGEG-AILTVTQNGYGKRTAESEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDEIA 863
>gi|365922778|ref|ZP_09446959.1| DNA gyrase, A subunit [Cardiobacterium valvarum F0432]
gi|364572016|gb|EHM49581.1| DNA gyrase, A subunit [Cardiobacterium valvarum F0432]
Length = 858
Score = 975 bits (2521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/852 (55%), Positives = 621/852 (72%), Gaps = 14/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++FAKEV+ + L +EM SYLDYAMSVIVGRALPD RDGLKPVHRRVLF+MH+ N WN
Sbjct: 1 MSEFAKEVLPVNLVDEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLFSMHKQGNAWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ +VK A +VG+ MGKYHPHGD +IYD LVRMAQ FSLR LVDGQGNFGS+DGD AA
Sbjct: 61 KKYVKSATIVGDVMGKYHPHGDSAIYDTLVRMAQPFSLRYPLVDGQGNFGSMDGDPPAAY 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL D++KET+DF NYDG ++EP VLP R+P+LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMAKIAHSLLTDIEKETVDFAPNYDGSQQEPVVLPARLPHLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPH+L E +D LY+L +PE L++ IP PDFPT +I G + + Y TG+GR+
Sbjct: 181 NIPPHHLGETLDACLYLLDHPEADTVALMRYIPGPDFPTGALINGARGIKEAYETGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTHIE + + I++DELPYQVNK +LL KI+ LVKEKK++ I+ LRDESDK G
Sbjct: 241 YIRAKTHIETDDHSGKQTIVVDELPYQVNKANLLGKIADLVKEKKIDGITALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E+ E++LN L++ TQLQ FG+NM+ALV GQP+LL+LKE L F+ HR+E
Sbjct: 301 IRMVIELRRGEVAEVILNNLFQLTQLQVVFGINMMALVGGQPRLLSLKEALQVFLAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE AHILEGL+IAL NID I++I+ +S P EAK ++ +W
Sbjct: 361 VVTRRTIYELRKARERAHILEGLSIALANIDEVIELIKQSSGPSEAKEALLGKSWA---A 417
Query: 421 SKIIGFNKKNYNTISKINNISKLQ--NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+++ + S+ ++K +N Y LS QAQ IL + L RLT +EQ+KI+++
Sbjct: 418 GQVVDMLARAGAENSRPEGLAKQYGLHNGRYHLSPEQAQAILDLRLHRLTGLEQEKILDE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +I ++ L DIL +R++E+I +EL IKN+Y ++RR++I+ +N S EDL
Sbjct: 478 YQQIIHEIEALLDILQIPERLLEVIKEELRDIKNQY----NDVRRTQILDTHLNLSLEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D VITLS+ GYIK+QP+S+Y AQKRGG+GK A KDED++ QL IANTHD +LCF
Sbjct: 534 IAEEDRVITLSHEGYIKAQPLSDYEAQKRGGKGKSATAVKDEDFVEQLIIANTHDTMLCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
+N G++YWLKV+++PQ RN++GKPI+N+ + E++ +L R++P++ Y+ +
Sbjct: 594 TNRGKVYWLKVYELPQAGRNAKGKPIVNLLPFEQGERLNAVL----TTREYPEDRYLIFA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS++S PR GIIA+NL +D L+ ALTDGS DIMLFSD+GKAVRF E
Sbjct: 650 TKSGTVKKTPLSDYSRPRSIGIIAINLREDDELVDVALTDGSRDIMLFSDAGKAVRFPEA 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
SVR+MGR A GV GM L+ Q+VIAL V + +LT TENGYGKRT I +Y + RGT
Sbjct: 710 SVRSMGRDATGVRGMNLDDGQRVIALCVVADNG-DILTVTENGYGKRTPIADYPQKGRGT 768
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG+ISI ++RNG+ V+A V IML+T G L+RTRV+EI GR+TQGV LI
Sbjct: 769 KGVISIACSERNGRAVSALQVQEDEHIMLVTDNGTLVRTRVAEISTSGRNTQGVRLIRTS 828
Query: 839 NKSKLCGVQRLC 850
+ KL V ++
Sbjct: 829 DSEKLIAVAKIV 840
>gi|406942571|gb|EKD74772.1| hypothetical protein ACD_44C00335G0002 [uncultured bacterium]
Length = 850
Score = 975 bits (2521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/853 (56%), Positives = 630/853 (73%), Gaps = 10/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ KE+I + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E++N WN
Sbjct: 1 MSELGKEIIPVTIEQELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMRELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD +YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDGPVYDTIVRMAQPFSMRYVLVDGQGNFGSIDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++E+++DL+KET+DF NYD E P+VLPTR PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIAHEMMMDLEKETVDFSPNYDDSELIPTVLPTRTPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVID + ++ +P ++NDL++ I PDFPTAGII G + + + Y TG+GRV
Sbjct: 181 NIPPHNLTEVIDACVALIDDPNLNLNDLLQHIKGPDFPTAGIINGRAGIIEAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA+T IE + II+ ELPYQVNK L+EKI++LVKEKK+E I+ LRDESDK G
Sbjct: 241 LIRARTGIENDEHNGKQTIIVTELPYQVNKARLIEKIAELVKEKKIEGITGLRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R EI E+VLN L+ QTQLQ F +NM+ L GQPK LNLKEIL F+ HR+E
Sbjct: 301 MRIVIELRRGEISEVVLNNLFAQTQLQVVFSINMVCLEEGQPKTLNLKEILDAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILEGL IALTNID I +I+ ++ P EAK ++++ TW V
Sbjct: 361 VVTRRTVFELRKARERAHILEGLGIALTNIDEMIALIKLSANPSEAKKQLLQHTWKSGVV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ K ++ L ++ Y+L++ QAQ IL + L RLT +EQ KI+ +Y+
Sbjct: 421 ANMLSHTTKESRP-EDLDPSFGLLDDQTYRLTEQQAQAILDLRLHRLTGLEQDKILEEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
N+++ + L DIL N R++E+I E IK +YG R +EI+ + S EDLI
Sbjct: 480 NLLETIKSLLDILHNESRLLEVIRSEFLAIKEQYGDK----RVTEILETQEDLSLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++VITLS+ GY+K Q +S Y AQ+RGG+GK A KDED+I QL IA+THD ILCFSN
Sbjct: 536 PEEVVITLSHEGYVKLQSLSLYHAQRRGGKGKAATSVKDEDFIEQLIIAHTHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G++YWLK +Q+PQ SR +RGKPIIN+ L E+I +LP+ +++ ++ YVFM+T
Sbjct: 596 HGKVYWLKSYQVPQASRIARGKPIINLLPLSEGERINALLPV----KEYREDQYVFMATE 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKK L +FS PR SGIIA+ L D L+G ALTDG D+MLFS++GKA+RF E+ V
Sbjct: 652 KGTVKKVSLDHFSRPRNSGIIAIELHEGDRLVGVALTDGKQDVMLFSNAGKAIRFPEDKV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + QK+I+L++ +K ++LTATENGYGK T I+EY +RG +G
Sbjct: 712 RSMGRTAAGVRGISLHENQKIISLIIV-KEKGNILTATENGYGKCTAIEEYRVTSRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI+ ++RNG VV AT V R E+MLIT G LIRTRV EI +GR+TQGV LI + +
Sbjct: 771 VISIQISERNGNVVGATQVTRGEEVMLITDRGTLIRTRVDEISVVGRNTQGVRLINLSEE 830
Query: 841 SKLCGVQRLCKIT 853
KL +QR+ T
Sbjct: 831 EKLTQLQRIADST 843
>gi|372269733|ref|ZP_09505781.1| DNA gyrase subunit A [Marinobacterium stanieri S30]
Length = 888
Score = 975 bits (2521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/849 (53%), Positives = 634/849 (74%), Gaps = 10/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WN
Sbjct: 1 MGDLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNAWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP++K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPYLKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+++L DLDKET+DF+ NYDG +K P+VLPTR+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRMAKISHQMLADLDKETVDFVDNYDGTQKIPAVLPTRLPNLLLNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+ G + ++ NP+ SI++L++ IP PDFPT GII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVVSGCIALIDNPDISIDELMECIPGPDFPTGGIINGRAGILQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ H+EE + R ++I E+PYQ+NK L+EKI+ LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRARHHVEEHPKNGRPVLVITEIPYQLNKARLIEKIADLVKEKKIEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E+P++++N L+ QTQLQ+ FG+NM+ALV+GQPK+L+LK IL F+ HR+E
Sbjct: 301 MRIVIELRRGEVPDVIINNLFSQTQLQSVFGINMVALVDGQPKILDLKSILECFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL IAL NID I++I+ + TP EAK +++E+ W DV
Sbjct: 361 VVTRRTVYELRKARERGHVLEGLAIALANIDAVIEMIKQSPTPAEAKERLLETAWEPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ ++ + + + Y LS +QAQ IL + L RLT +E +K+I +Y
Sbjct: 421 TDMLERAGEHACRPEDLEPQYGMHDG-HYHLSPVQAQAILDLRLHRLTGLEHEKLIGEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++K+ +L IL + +R++E+I +EL+ + +Y RR+EI + + + DLI
Sbjct: 480 ELLEKIAELLHILGSYERLMEVIREELDEVVAEYADE----RRTEIQASMQDLTVADLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+T+S+ GY K+QP+++Y+AQ+RGG+GK A KDED+I L IANTHD +LCF+N
Sbjct: 536 EEDMVVTISHAGYAKTQPLTDYQAQRRGGKGKSATAMKDEDFIEHLLIANTHDTVLCFTN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV++IP SR SRG+P+IN+ L E I+ ILP+ ++F + ++FM+T+
Sbjct: 596 MGKVYWLKVYEIPPASRASRGRPVINILPLAEDEWISTILPV----KEFDPDRFIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +G+IA+++ D LIGA LT+G D+ML + +GKA+RFNEN V
Sbjct: 652 NGTVKKTPLDAFSRPRSTGLIALDIVEGDRLIGATLTNGQDDVMLVTSAGKAIRFNENDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+ARGV G+++E+ +VI+L+V + VLTA+E+GYGK+T + E+ RG +G
Sbjct: 712 RAMGRTARGVRGVKMEEDARVISLIVPQEGGE-VLTASEHGYGKKTRVDEFPLRGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+++ RNG++ A V ++MLI+ G L+RTR SEI +GR+TQGV+LI + +
Sbjct: 771 VIAMQCTDRNGQLAGAVQVFDGDDVMLISNRGTLVRTRSSEISSLGRNTQGVMLIRLAEE 830
Query: 841 SKLCGVQRL 849
L G+ R+
Sbjct: 831 EALVGIARI 839
>gi|375262003|ref|YP_005021173.1| DNA gyrase subunit A [Klebsiella oxytoca KCTC 1686]
gi|402843997|ref|ZP_10892376.1| DNA gyrase, A subunit [Klebsiella sp. OBRC7]
gi|423104020|ref|ZP_17091722.1| DNA gyrase subunit A [Klebsiella oxytoca 10-5242]
gi|365911481|gb|AEX06934.1| DNA gyrase subunit A [Klebsiella oxytoca KCTC 1686]
gi|376385662|gb|EHS98383.1| DNA gyrase subunit A [Klebsiella oxytoca 10-5242]
gi|402275805|gb|EJU24941.1| DNA gyrase, A subunit [Klebsiella sp. OBRC7]
Length = 877
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVENEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEI+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALIARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +++ ++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELVREQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + KV++L+V + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDKVVSLIVPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDEDIA 863
>gi|421725313|ref|ZP_16164508.1| DNA gyrase subunit A [Klebsiella oxytoca M5al]
gi|423124959|ref|ZP_17112638.1| DNA gyrase subunit A [Klebsiella oxytoca 10-5250]
gi|376400404|gb|EHT13017.1| DNA gyrase subunit A [Klebsiella oxytoca 10-5250]
gi|410373915|gb|EKP28601.1| DNA gyrase subunit A [Klebsiella oxytoca M5al]
Length = 877
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVENEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEI+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLIARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +++ ++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELVREQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + KV++L+V + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDKVVSLIVPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDEDIA 863
>gi|204928981|ref|ZP_03220124.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204321525|gb|EDZ06724.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 878
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++N+Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLNEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|401764515|ref|YP_006579522.1| DNA gyrase subunit A [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400176049|gb|AFP70898.1| DNA gyrase subunit A [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 878
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAGLVSRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELELVRDQFGDE----RRTEITANSSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 REDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIVPRGEG-AILTVTQNGYGKRTAESEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDEIA 863
>gi|381403884|ref|ZP_09928568.1| DNA gyrase subunit A [Pantoea sp. Sc1]
gi|380737083|gb|EIB98146.1| DNA gyrase subunit A [Pantoea sp. Sc1]
Length = 888
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+++LL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHDLLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLREVINGCLAYIEDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R I+I ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVEADAKTGRETIVIHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMALKEILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPTPAEAKAGLISQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPQFGIRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ L ILS+++R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 ALLDQIAGLLLILSSAERLMEVIREELELMRDQFGDD----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
LG VKKT L FS PR +GIIAVNL ++D LIG ALT+G+ + MLFS +GK VRF E++V
Sbjct: 652 LGTVKKTALKEFSRPRSAGIIAVNLRDDDELIGVALTNGNDEAMLFSAAGKVVRFAESAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + +V++L+V ++ ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTASGVRGIKLAEGDRVVSLIVP-REEGAILTVTQNGYGKRTANSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTDRNGPVIGAVQVVDSDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G+ +A
Sbjct: 831 ENVVGLQRVAEPVEEEE---LDSIDGSVAEGEDDIA 863
>gi|251790599|ref|YP_003005320.1| DNA gyrase subunit A [Dickeya zeae Ech1591]
gi|247539220|gb|ACT07841.1| DNA gyrase, A subunit [Dickeya zeae Ech1591]
Length = 877
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/869 (54%), Positives = 639/869 (73%), Gaps = 16/869 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G L + + S+ L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVINGCLAYIDDENISVEGLMEHIPGPDFPTAAIINGKRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQ+Q +FG+NM+AL GQPKL+ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKLMTLKEILAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR STP EAK ++ W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALVNIDPIIELIRHASTPAEAKIALVAQAWELGSV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I ++ Y L+D QAQ IL + LQ+LT +E +K+++
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGI----HDGKYHLTDQQAQAILDLRLQKLTGLEHEKLLD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL + +R++E+I +EL I+ Y + RR+EI N+ + + ED
Sbjct: 477 EYKELLTQIAELLFILRSPERLMEVIREELVAIRELY----NDARRTEITHNSADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI+ +++V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILC
Sbjct: 533 LISEENVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + VFM
Sbjct: 593 FSSRGRLYWLKVYQLPEASRGARGRPIINLLPLEQDERITAILPV----REYEEGMNVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L+ FS PR +GIIAVNL++ D LIG LTDGS ++MLFS GK VRF+E
Sbjct: 649 ATASGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFSE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
++VR MGR+A GV G+ L+ +V++L+V + +LT T+NG+GKRT + EY +R
Sbjct: 709 SAVRTMGRTATGVRGINLQDDDRVVSLIVPRGEG-DILTVTQNGFGKRTAVTEYPVKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
TKG+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 768 TKGVISIKVSERNGNVVGAVQVDSADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRT 827
Query: 838 ENKSKLCGVQRLCKITMIKKYIPVITIDG 866
++ G+QR+ + + V+ +DG
Sbjct: 828 AEDERVVGLQRVAEPVEDDELDSVVPVDG 856
>gi|334124900|ref|ZP_08498895.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Enterobacter
hormaechei ATCC 49162]
gi|333387971|gb|EGK59162.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Enterobacter
hormaechei ATCC 49162]
Length = 878
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKASLVARPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELELVRDQFGDE----RRTEITANSSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 REDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIVPRGEG-AILTVTQNGYGKRTAESEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDEIA 863
>gi|295098107|emb|CBK87197.1| DNA gyrase subunit A [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 878
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKASLVARPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELELVRDQFGDE----RRTEITANSSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 REDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIVPRGEG-AILTVTQNGYGKRTAESEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDEIA 863
>gi|271499645|ref|YP_003332670.1| DNA gyrase subunit A [Dickeya dadantii Ech586]
gi|270343200|gb|ACZ75965.1| DNA gyrase, A subunit [Dickeya dadantii Ech586]
Length = 877
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/869 (53%), Positives = 640/869 (73%), Gaps = 16/869 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G L + + S+ L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVINGCLAYIDDENISVEGLMAHIPGPDFPTAAIINGKRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K+++ IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIDGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQ+Q +FG+NM+AL GQPKL+ LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKLMTLKDILAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR STP +AK ++ W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALVNIDPIIELIRHASTPADAKTALVAQAWELGSV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I ++ Y+L++ QAQ IL + LQ+LT +E +K+++
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGI----HDGKYRLTEQQAQAILDLRLQKLTGLEHEKLLD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL + +R++E+I +EL I+ +Y + RR+EI N+ + + ED
Sbjct: 477 EYKELLTQIAELLFILRSPERLMEVIREELEAIREQY----NDARRTEITHNSADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI+ +++V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILC
Sbjct: 533 LISQENVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + VFM
Sbjct: 593 FSSRGRLYWLKVYQLPEASRGARGRPIINLLPLEQDERITAILPV----REYEEGMNVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L+ FS PR +GIIAVNL++ D LIG LTDGS ++MLFS GK VRF+E
Sbjct: 649 ATASGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFSE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
++VR MGR+A GV G+ L+ +V++L+V +LT T+NG+GKRT + EY +R
Sbjct: 709 SAVRTMGRTATGVRGINLQDDDRVVSLIVPRGDG-DILTVTQNGFGKRTAVTEYPVKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
TKG+ISIK ++RNGKVV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 768 TKGVISIKVSERNGKVVGAVQVDTADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRT 827
Query: 838 ENKSKLCGVQRLCKITMIKKYIPVITIDG 866
+ ++ G+QR+ + + V+ +DG
Sbjct: 828 AEEERVVGLQRVAEPVEDDELDSVVPVDG 856
>gi|423109407|ref|ZP_17097102.1| DNA gyrase subunit A [Klebsiella oxytoca 10-5243]
gi|376382141|gb|EHS94875.1| DNA gyrase subunit A [Klebsiella oxytoca 10-5243]
Length = 877
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVENEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEI+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALIARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +++ ++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELVREQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + KV++L++ + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDKVVSLIIPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDEDIA 863
>gi|283832330|ref|ZP_06352071.1| DNA gyrase, A subunit [Citrobacter youngae ATCC 29220]
gi|291071977|gb|EFE10086.1| DNA gyrase, A subunit [Citrobacter youngae ATCC 29220]
Length = 878
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEQIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ +WNL +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALVARSWNLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I+ ++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIREQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAESDSVVSLIVPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVEDTDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSAAEGDDDIA 863
>gi|237732271|ref|ZP_04562752.1| DNA gyrase subunit A [Citrobacter sp. 30_2]
gi|365108473|ref|ZP_09336332.1| DNA gyrase subunit A [Citrobacter freundii 4_7_47CFAA]
gi|226907810|gb|EEH93728.1| DNA gyrase subunit A [Citrobacter sp. 30_2]
gi|363640367|gb|EHL79838.1| DNA gyrase subunit A [Citrobacter freundii 4_7_47CFAA]
Length = 879
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/876 (53%), Positives = 648/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEQIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ +W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALVARSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I+ ++G + RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIREQFG----DARRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L +K V++L+V + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAEKDSVVSLIVPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVEDTDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSAAEGDEDIA 863
>gi|416530292|ref|ZP_11744858.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416532902|ref|ZP_11745911.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416554280|ref|ZP_11758188.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416567029|ref|ZP_11764156.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|417467775|ref|ZP_12165173.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|353629508|gb|EHC77299.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|363551037|gb|EHL35358.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363561565|gb|EHL45681.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363568855|gb|EHL52821.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363579379|gb|EHL63170.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
Length = 878
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|423115342|ref|ZP_17103033.1| DNA gyrase subunit A [Klebsiella oxytoca 10-5245]
gi|376381428|gb|EHS94165.1| DNA gyrase subunit A [Klebsiella oxytoca 10-5245]
Length = 877
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVENEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEI+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALIARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +++ ++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELVREQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDEDIA 863
>gi|416506955|ref|ZP_11735097.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363554498|gb|EHL38734.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
Length = 878
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPHGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|205353389|ref|YP_002227190.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|440767198|ref|ZP_20946182.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|205273170|emb|CAR38131.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|436420994|gb|ELP18846.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
Length = 878
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDFAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|375119824|ref|ZP_09764991.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|326624091|gb|EGE30436.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
Length = 878
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDFAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|94499388|ref|ZP_01305925.1| DNA gyrase subunit A [Bermanella marisrubri]
gi|94428142|gb|EAT13115.1| DNA gyrase subunit A [Oceanobacter sp. RED65]
Length = 868
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/846 (54%), Positives = 634/846 (74%), Gaps = 10/846 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +KE++ + +E+E+ +SY+DYAMSVIVGRALPDVRDGLKPVHRRVL AM+ +NN WN
Sbjct: 1 MGDLSKEILPVNIEDELKQSYMDYAMSVIVGRALPDVRDGLKPVHRRVLHAMNILNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ F++R TLVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFAMRYTLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L D+DKET++F+ NYDG E+ P VLPTRIP+LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHEMLADIDKETVNFVDNYDGTEQIPEVLPTRIPSLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI G L ++ NPE ++ L++ I PDFPTA +I G + D Y TG+GR+
Sbjct: 181 NIPPHNLTEVITGCLALIENPEIDVDGLMQYITGPDFPTAALINGRDGIVDAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ H E ++ + +II E+PYQVNK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 QMRARHHFEMDDKNGKESIIFTEIPYQVNKARLIEKIAELVKDKKIEGITELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+EL+R E+PE+VLN L+ QTQLQ FG+N +ALV+GQPK+LNLK++L F+ HR+E
Sbjct: 301 MRIVVELRRGEVPEVVLNNLFAQTQLQTVFGINTVALVDGQPKILNLKDMLEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI++LRKARE HILEGL +AL NID I I+++ T EAK+K+I + W DV
Sbjct: 361 VVTRRTIYDLRKARERGHILEGLAVALANIDPVIATIKASPTAAEAKDKLISTAWQPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++ + ++ ++ + Y LS QAQ IL M LQ+LT +E K+I++Y+
Sbjct: 421 MEMLERAGPDACRPDDLDPQFGFRDGNYY-LSPAQAQAILDMRLQKLTGLEHDKLIDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+ ++ + IL++ +R++E+I +EL IK++YG + R +EI+ + + EDLIA
Sbjct: 480 VKVDEIAEYLQILASHERLMEVIREELESIKDEYG----DGRLTEIVETRRHLTMEDLIA 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+TLS+ GY K QP+++Y+AQ+RGGRGK A KDED+I L +ANTHD ILCFSN
Sbjct: 536 EEDMVVTLSHGGYAKIQPVTDYQAQRRGGRGKSASAIKDEDFIEHLLVANTHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+ IP SR SRG+PI+N+ L+ E IT ILP+ R++ + +Y+FM+TS
Sbjct: 596 AGKVYWLKVYDIPVASRQSRGRPIVNLLPLEQDEWITTILPV----REYTEGHYIFMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR SG+IA+ L D L+GA +TDG+ D++L SD GKAVRF E++V
Sbjct: 652 KGTVKKTDLTAFSRPRSSGLIALELEEGDTLMGAEITDGNQDVLLMSDVGKAVRFAESNV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+ARGV G++++ QKV++L++ + +VLTA+E+GYGKRT + E+ RGT+G
Sbjct: 712 RAMGRTARGVRGIKMQDDQKVVSLMIP-KEGATVLTASEHGYGKRTDVDEFPTKGRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I + TN RNGK+V A V +EIMLIT G L+RTRVSE+ +GR+TQGV LI V+
Sbjct: 771 VIGMVTNDRNGKLVGAVQVFDGNEIMLITNQGTLVRTRVSEVSTLGRNTQGVTLIRVQEG 830
Query: 841 SKLCGV 846
+L G+
Sbjct: 831 ERLVGI 836
>gi|372277118|ref|ZP_09513154.1| DNA gyrase subunit A [Pantoea sp. SL1_M5]
gi|390436182|ref|ZP_10224720.1| DNA gyrase subunit A [Pantoea agglomerans IG1]
Length = 890
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYL YAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLGYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+++LL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHDLLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + N + SI +L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLREVINGCLAYIENEDISIEELMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R III ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVEADAKTGRETIIIHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMALKEILDAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR P EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPNPAEAKAGLIAQSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + ++ +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLDPQYGIRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L ILSN+ R++E+I +EL ++++++G RR+EI N + + EDLI
Sbjct: 480 ALLEQIAELLRILSNADRLMEVIREELELMRDQFGDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
LG VKKT L FS PR +GIIAVNL ++D LIG ALT+G+ + MLFS +GK VRF E +V
Sbjct: 652 LGTVKKTALKEFSRPRSAGIIAVNLRDDDELIGVALTNGNDEAMLFSAAGKVVRFAETAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G+RL + +V++L+V ++ +++T T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTASGVRGIRLAEGDRVVSLIVP-REEGAIMTVTQNGYGKRTANSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G+ +A
Sbjct: 831 ENVVGLQRVAEPVEEEE---LDSIDGSVAEGEEDIA 863
>gi|261340635|ref|ZP_05968493.1| DNA gyrase, A subunit [Enterobacter cancerogenus ATCC 35316]
gi|288317048|gb|EFC55986.1| DNA gyrase, A subunit [Enterobacter cancerogenus ATCC 35316]
Length = 878
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 645/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + E SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIDDEEISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAALVAQPWALGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ L IL ++ R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAGLLHILGSADRLMEVIREELELVRDQFGDE----RRTEITANSSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 REDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDAVVSLIVPRGEG-AILTVTQNGYGKRTAESEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGTVAEGDDDIA 863
>gi|407715943|ref|YP_006837223.1| DNA gyrase subunit A [Cycloclasticus sp. P1]
gi|407256279|gb|AFT66720.1| DNA gyrase, A subunit [Cycloclasticus sp. P1]
Length = 858
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/853 (54%), Positives = 634/853 (74%), Gaps = 12/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ KE I + +E+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ +NN WN
Sbjct: 1 MSELVKETIPVNIEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRHMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+S+E+L DLDKET+DF +NYD E EPSVLP R P LLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKLSHEMLTDLDKETVDFTANYDESEHEPSVLPARAPLLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV L ++ PE +I+ L++ IP PDFPTAGII G + + + Y TG+G++
Sbjct: 181 NIPPHNLAEVTSACLRLIEEPETTIDQLLEYIPGPDFPTAGIINGATGIREAYQTGRGKI 240
Query: 241 IIRAKTHIE-EFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA+ H+E E + ++ +II+ ELPYQVNK L+EKI+ LVK+ KLE IS LRDESDK
Sbjct: 241 YLRARYHVEGEESSNSKLSIIVTELPYQVNKARLMEKIAHLVKDGKLEGISGLRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIELKR E+PE+++N LY+ TQLQN FG+NM+AL++G+PK LNLK+IL FI HR+
Sbjct: 301 GMRMVIELKRGEVPEVIINNLYQHTQLQNVFGINMVALIDGRPKCLNLKQILNAFIDHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRTI++LRKARE AH LEGL IAL+NID I +I++ TP EAK ++ + W
Sbjct: 361 EVVTRRTIYDLRKARERAHTLEGLAIALSNIDEMIAMIKAAKTPAEAKVSLLGAAWEPGL 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V+ ++ + + K+ + + Y LS QAQ IL++ L RLT +EQ KI+ +Y
Sbjct: 421 VADLLSKADSSRSRPDKLEEQYGIVDG-RYHLSPAQAQAILELRLHRLTGLEQDKILQEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
++++ + DL DIL+N R++ +I++EL + +Y K RR+EI+ +N + EDLI
Sbjct: 480 KDLLVVIDDLLDILANRDRLMSVISEELKALIEEY----KEERRTEIVDKFLNLTAEDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+DMV+TLS+ GY+KSQP++ Y AQ+RGG+GK A TK+ED+I++LFIANTHD +LCFS
Sbjct: 536 TEEDMVVTLSHEGYVKSQPLTSYTAQRRGGKGKTAANTKNEDFIDKLFIANTHDTVLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWL+V+ +P SR +RGKPI+N+ L + E+I ILP+ R+F ++ Y+FM+T
Sbjct: 596 SKGKVYWLRVFNLPVASRVARGKPIVNLLPLDSDERINAILPI----REFNEDEYIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT + F PR +G IA++L ++D L+G A+TDG D+MLF+ SGK F E
Sbjct: 652 ESGTVKKTHIKEFEKPRANGKIAIDLRDDDTLVGVAVTDGEKDVMLFASSGKVASFKEAD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR MGR+A GV GMRL+ ++ +I+L++S + +VLT T+NGYGKRT I+EY H RG +
Sbjct: 712 VRVMGRTASGVRGMRLKDEEHIISLIIS--EPGTVLTLTQNGYGKRTKIEEYPIHKRGGQ 769
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+++T++RNG +V A LV+ E+MLIT GG L+RTR SEI +GR+TQGV +I
Sbjct: 770 GVIAMQTSERNGALVGAVLVDESDELMLITDGGTLVRTRTSEISILGRNTQGVRVIRPAK 829
Query: 840 KSKLCGVQRLCKI 852
K+ G+ R+ +
Sbjct: 830 NEKVIGLDRIASL 842
>gi|198243898|ref|YP_002216341.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|445147347|ref|ZP_21388103.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445157832|ref|ZP_21392976.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|197938414|gb|ACH75747.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|444844890|gb|ELX70116.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444845913|gb|ELX71095.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
Length = 878
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|311278801|ref|YP_003941032.1| DNA gyrase subunit A [Enterobacter cloacae SCF1]
gi|308747996|gb|ADO47748.1| DNA gyrase, A subunit [Enterobacter cloacae SCF1]
Length = 878
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/879 (53%), Positives = 644/879 (73%), Gaps = 19/879 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + SI L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDENISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALIARSWDLGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G + + I ++ Y L++ QAQ IL + LQ+LT +E +K+++
Sbjct: 421 SAMLERAGDDAARPEWLEPQFGI----HDGKYFLTEQQAQAILDLRLQKLTGLEHEKLLD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL ++ R++E+I +EL +I+ ++G RR+EI N+ + + ED
Sbjct: 477 EYKELLEQIAELLHILGSADRLMEVIREELELIREQFGDE----RRTEITANSADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILC
Sbjct: 533 LINQEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM
Sbjct: 593 FSSRGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF E
Sbjct: 649 ATASGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
N+VRAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +RG
Sbjct: 709 NAVRAMGRTATGVRGIKLAGEDSVVSLIIPRGEG-AILTVTQNGYGKRTAEGEYPTKSRG 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 768 TQGVISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRT 827
Query: 838 ENKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 828 AEDEHVVGLQRVAEPVDDEE---LDAIDGSAAEGDDEIA 863
>gi|16765599|ref|NP_461214.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56412831|ref|YP_149906.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161613010|ref|YP_001586975.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|167549737|ref|ZP_02343496.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|168242385|ref|ZP_02667317.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168261717|ref|ZP_02683690.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168466034|ref|ZP_02699904.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168818000|ref|ZP_02830000.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194445296|ref|YP_002041533.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194450393|ref|YP_002046326.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197248208|ref|YP_002147228.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197263978|ref|ZP_03164052.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197361764|ref|YP_002141400.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|207857691|ref|YP_002244342.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224583243|ref|YP_002637041.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|374982211|ref|ZP_09723533.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|375002089|ref|ZP_09726429.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|375115175|ref|ZP_09760345.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|375124230|ref|ZP_09769394.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378445701|ref|YP_005233333.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378450981|ref|YP_005238340.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378700182|ref|YP_005182139.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378954378|ref|YP_005211865.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|378989658|ref|YP_005252822.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379701503|ref|YP_005243231.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383496973|ref|YP_005397662.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386592082|ref|YP_006088482.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|409250881|ref|YP_006886688.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|416421239|ref|ZP_11689352.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416434721|ref|ZP_11697845.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416437827|ref|ZP_11699036.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416442724|ref|ZP_11702485.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416449941|ref|ZP_11707085.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416456093|ref|ZP_11711157.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416470375|ref|ZP_11718830.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416478763|ref|ZP_11721881.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416486129|ref|ZP_11725009.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416497023|ref|ZP_11729456.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416513924|ref|ZP_11738100.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416544105|ref|ZP_11752674.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416557134|ref|ZP_11759316.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416575200|ref|ZP_11768292.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416582577|ref|ZP_11772776.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416590221|ref|ZP_11777616.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416596821|ref|ZP_11781636.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416604067|ref|ZP_11785928.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416611011|ref|ZP_11790504.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416617651|ref|ZP_11794277.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416630550|ref|ZP_11800799.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416638577|ref|ZP_11804046.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416649340|ref|ZP_11809813.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416657423|ref|ZP_11813681.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416665194|ref|ZP_11816519.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416674120|ref|ZP_11821188.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416690266|ref|ZP_11825808.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416703552|ref|ZP_11829648.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416711748|ref|ZP_11835528.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416715680|ref|ZP_11838319.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416722431|ref|ZP_11843363.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416730578|ref|ZP_11848717.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416740592|ref|ZP_11854515.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416754087|ref|ZP_11861111.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416760668|ref|ZP_11864956.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416769289|ref|ZP_11870979.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|417324901|ref|ZP_12111031.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|417342533|ref|ZP_12123316.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|417532437|ref|ZP_12186815.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|418483326|ref|ZP_13052336.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418490280|ref|ZP_13056828.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418497060|ref|ZP_13063481.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418501781|ref|ZP_13068160.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418506131|ref|ZP_13072469.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418507735|ref|ZP_13074044.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418511601|ref|ZP_13077852.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418526284|ref|ZP_13092262.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418763718|ref|ZP_13319824.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418765720|ref|ZP_13321803.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418770123|ref|ZP_13326148.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418776369|ref|ZP_13332315.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418781808|ref|ZP_13337684.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418785814|ref|ZP_13341641.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418787814|ref|ZP_13343614.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418794833|ref|ZP_13350549.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418800102|ref|ZP_13355766.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418803224|ref|ZP_13358848.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418805235|ref|ZP_13360823.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418813962|ref|ZP_13369482.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418814446|ref|ZP_13369960.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418819411|ref|ZP_13374862.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418824310|ref|ZP_13379676.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418829329|ref|ZP_13384311.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418838540|ref|ZP_13393384.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418839242|ref|ZP_13394079.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418847217|ref|ZP_13401979.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418852189|ref|ZP_13406894.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418856577|ref|ZP_13411219.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418858695|ref|ZP_13413307.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418865000|ref|ZP_13419515.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|418867263|ref|ZP_13421723.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419728404|ref|ZP_14255369.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419734288|ref|ZP_14261181.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419737825|ref|ZP_14264595.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419746299|ref|ZP_14272887.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419750324|ref|ZP_14276786.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|419789098|ref|ZP_14314780.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419791420|ref|ZP_14317073.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421357521|ref|ZP_15807832.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421361681|ref|ZP_15811940.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421367253|ref|ZP_15817447.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421371407|ref|ZP_15821566.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421375483|ref|ZP_15825595.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421379376|ref|ZP_15829445.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421384405|ref|ZP_15834430.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421388505|ref|ZP_15838495.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421392948|ref|ZP_15842897.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421397751|ref|ZP_15847663.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421401988|ref|ZP_15851853.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421407015|ref|ZP_15856824.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421411534|ref|ZP_15861299.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421418368|ref|ZP_15868070.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421419793|ref|ZP_15869477.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421424545|ref|ZP_15874187.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430556|ref|ZP_15880143.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421434004|ref|ZP_15883555.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421441632|ref|ZP_15891098.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421444368|ref|ZP_15893799.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421447221|ref|ZP_15896623.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421570298|ref|ZP_16015990.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421576259|ref|ZP_16021862.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421578114|ref|ZP_16023696.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421585537|ref|ZP_16031034.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421885643|ref|ZP_16316833.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|422026557|ref|ZP_16372940.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422031581|ref|ZP_16377739.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427551476|ref|ZP_18928231.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427568028|ref|ZP_18932952.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427588417|ref|ZP_18937747.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427611901|ref|ZP_18942608.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427635623|ref|ZP_18947504.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427656582|ref|ZP_18952270.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427661825|ref|ZP_18957178.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427671584|ref|ZP_18961994.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|436619926|ref|ZP_20514572.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436808423|ref|ZP_20527847.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436817399|ref|ZP_20534481.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436830644|ref|ZP_20535386.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436849182|ref|ZP_20540351.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436856778|ref|ZP_20545700.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436862603|ref|ZP_20549286.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436872264|ref|ZP_20555286.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436880057|ref|ZP_20559891.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436889124|ref|ZP_20565045.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436897289|ref|ZP_20569936.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436900885|ref|ZP_20571809.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436909658|ref|ZP_20576382.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436917410|ref|ZP_20580944.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436927989|ref|ZP_20587483.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436933940|ref|ZP_20590095.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436942325|ref|ZP_20595308.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436948628|ref|ZP_20598841.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436957266|ref|ZP_20602934.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436968370|ref|ZP_20607779.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436986317|ref|ZP_20615407.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436990891|ref|ZP_20617188.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437004214|ref|ZP_20621943.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437014521|ref|ZP_20625599.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437026886|ref|ZP_20629897.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437045102|ref|ZP_20637537.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437048487|ref|ZP_20639526.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437060925|ref|ZP_20646752.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437067987|ref|ZP_20650619.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437075310|ref|ZP_20653764.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437080562|ref|ZP_20657166.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437091077|ref|ZP_20663068.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437102681|ref|ZP_20666709.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437119897|ref|ZP_20671115.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437127895|ref|ZP_20674985.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437135857|ref|ZP_20679503.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437143362|ref|ZP_20684229.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437154832|ref|ZP_20691292.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437157956|ref|ZP_20692910.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437167876|ref|ZP_20699074.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437173997|ref|ZP_20702068.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437183689|ref|ZP_20707844.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437258357|ref|ZP_20716394.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437266846|ref|ZP_20720930.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437282296|ref|ZP_20729171.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437298027|ref|ZP_20732936.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437313671|ref|ZP_20736839.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437336955|ref|ZP_20743164.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437367467|ref|ZP_20748871.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437408589|ref|ZP_20752474.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437434396|ref|ZP_20756335.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437459485|ref|ZP_20761164.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437472671|ref|ZP_20765675.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437497523|ref|ZP_20773511.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437515024|ref|ZP_20777907.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437549334|ref|ZP_20783330.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437573242|ref|ZP_20789518.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437591549|ref|ZP_20794829.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437600864|ref|ZP_20797400.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437615329|ref|ZP_20802151.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437647196|ref|ZP_20809233.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437660398|ref|ZP_20812470.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437670013|ref|ZP_20815568.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437700526|ref|ZP_20823884.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437705241|ref|ZP_20824914.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437733671|ref|ZP_20832062.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437804751|ref|ZP_20839079.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437840228|ref|ZP_20846408.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|437993862|ref|ZP_20853898.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438098253|ref|ZP_20862661.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438111592|ref|ZP_20868393.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438135885|ref|ZP_20874319.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|440761649|ref|ZP_20940720.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440773901|ref|ZP_20952790.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|445128905|ref|ZP_21380516.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445177205|ref|ZP_21397694.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445191007|ref|ZP_21399730.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445233942|ref|ZP_21406554.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445344830|ref|ZP_21417866.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445363989|ref|ZP_21424828.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|452123896|ref|YP_007474144.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|17865733|sp|P37411.3|GYRA_SALTY RecName: Full=DNA gyrase subunit A
gi|16420810|gb|AAL21173.1| DNA gyrase, subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56127088|gb|AAV76594.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161362374|gb|ABX66142.1| hypothetical protein SPAB_00716 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403959|gb|ACF64181.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194408697|gb|ACF68916.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|195631306|gb|EDX49866.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197093240|emb|CAR58685.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197211911|gb|ACH49308.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197242233|gb|EDY24853.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205325309|gb|EDZ13148.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205338650|gb|EDZ25414.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205344910|gb|EDZ31674.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205349514|gb|EDZ36145.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|206709494|emb|CAR33838.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224467770|gb|ACN45600.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261247480|emb|CBG25307.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994359|gb|ACY89244.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301158830|emb|CBW18343.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|320086709|emb|CBY96481.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321223028|gb|EFX48099.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322617024|gb|EFY13930.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322617670|gb|EFY14569.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624700|gb|EFY21529.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322630249|gb|EFY27019.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322634430|gb|EFY31163.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322639140|gb|EFY35832.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640137|gb|EFY36803.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322645775|gb|EFY42299.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322651550|gb|EFY47925.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656111|gb|EFY52410.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659463|gb|EFY55710.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322665925|gb|EFY62108.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669837|gb|EFY65978.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673822|gb|EFY69919.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322678580|gb|EFY74636.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322683624|gb|EFY79638.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322687700|gb|EFY83670.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|322715321|gb|EFZ06892.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|323130602|gb|ADX18032.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|323196203|gb|EFZ81360.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323198371|gb|EFZ83473.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204191|gb|EFZ89202.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323212343|gb|EFZ97166.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218250|gb|EGA02960.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323222992|gb|EGA07341.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227427|gb|EGA11592.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323232245|gb|EGA16348.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323235722|gb|EGA19806.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323241118|gb|EGA25154.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323244860|gb|EGA28862.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323248571|gb|EGA32502.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251591|gb|EGA35459.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323263082|gb|EGA46628.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323268142|gb|EGA51619.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270765|gb|EGA54203.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326628480|gb|EGE34823.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|332989205|gb|AEF08188.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|353076777|gb|EHB42537.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353577694|gb|EHC39777.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|353662741|gb|EHD01646.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|357204989|gb|AET53035.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|357956515|gb|EHJ81921.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|363567066|gb|EHL51074.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363579075|gb|EHL62873.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|366054864|gb|EHN19207.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366061906|gb|EHN26150.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366065852|gb|EHN30038.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366066204|gb|EHN30379.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366066394|gb|EHN30563.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366080503|gb|EHN44472.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366084451|gb|EHN48359.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366829096|gb|EHN55975.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372205840|gb|EHP19346.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|379984733|emb|CCF89106.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|380463794|gb|AFD59197.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381297946|gb|EIC39029.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381299458|gb|EIC40530.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381302778|gb|EIC43808.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381303846|gb|EIC44860.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381307198|gb|EIC48061.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383799126|gb|AFH46208.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|392615602|gb|EIW98038.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392620640|gb|EIX03007.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392731411|gb|EIZ88638.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392738326|gb|EIZ95472.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392740233|gb|EIZ97359.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392746045|gb|EJA03064.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392746080|gb|EJA03098.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392751055|gb|EJA08012.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392760443|gb|EJA17280.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392762732|gb|EJA19546.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392765339|gb|EJA22127.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392772296|gb|EJA28997.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392775834|gb|EJA32525.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392784936|gb|EJA41517.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392794240|gb|EJA50663.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392794702|gb|EJA51094.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392796053|gb|EJA52403.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392804560|gb|EJA60717.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392808980|gb|EJA65027.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392812953|gb|EJA68928.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392815719|gb|EJA71655.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392819086|gb|EJA74959.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392823281|gb|EJA79079.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392829086|gb|EJA84767.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392831953|gb|EJA87578.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392839683|gb|EJA95222.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|395988065|gb|EJH97226.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395991583|gb|EJI00707.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395992684|gb|EJI01796.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|396004084|gb|EJI13068.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396004398|gb|EJI13380.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396006675|gb|EJI15637.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396019393|gb|EJI28249.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396019848|gb|EJI28699.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396020416|gb|EJI29261.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396031578|gb|EJI40304.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396033198|gb|EJI41913.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396033515|gb|EJI42222.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396038369|gb|EJI47008.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396045900|gb|EJI54491.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396047204|gb|EJI55780.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396055604|gb|EJI64089.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396060086|gb|EJI68533.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396060989|gb|EJI69425.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396063387|gb|EJI71781.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396067853|gb|EJI76210.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396075054|gb|EJI83330.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|402519057|gb|EJW26421.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402525154|gb|EJW32448.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402525691|gb|EJW32978.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402530013|gb|EJW37238.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414017349|gb|EKT01079.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414018254|gb|EKT01918.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414019364|gb|EKT02979.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414031867|gb|EKT14903.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414033005|gb|EKT15983.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414036286|gb|EKT19123.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414046381|gb|EKT28712.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414047321|gb|EKT29607.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414052128|gb|EKT34195.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414059053|gb|EKT40669.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|434940647|gb|ELL47240.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434964901|gb|ELL57868.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434967441|gb|ELL60257.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434971848|gb|ELL64351.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434983386|gb|ELL75182.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434989037|gb|ELL80610.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434990789|gb|ELL82319.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434998852|gb|ELL90066.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435000183|gb|ELL91331.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435006361|gb|ELL97262.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435008150|gb|ELL98976.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435014416|gb|ELM04993.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435021466|gb|ELM11834.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435029082|gb|ELM19142.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435031858|gb|ELM21813.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435035031|gb|ELM24879.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435042168|gb|ELM31900.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435044346|gb|ELM34043.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435055499|gb|ELM44911.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435056921|gb|ELM46291.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435060682|gb|ELM49929.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435061543|gb|ELM50766.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435069388|gb|ELM58390.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435072956|gb|ELM61861.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435080330|gb|ELM69011.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435085049|gb|ELM73604.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435086032|gb|ELM74577.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435090205|gb|ELM78609.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435095594|gb|ELM83889.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435098920|gb|ELM87149.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435106117|gb|ELM94136.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435113225|gb|ELN01074.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435113393|gb|ELN01241.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435122772|gb|ELN10285.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435128496|gb|ELN15833.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435129478|gb|ELN16774.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435137646|gb|ELN24686.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435138838|gb|ELN25853.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435140216|gb|ELN27179.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435150854|gb|ELN37518.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435153136|gb|ELN39751.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435158229|gb|ELN44640.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435162226|gb|ELN48412.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435166686|gb|ELN52659.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435167858|gb|ELN53713.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435176699|gb|ELN62066.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435178903|gb|ELN64078.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435181902|gb|ELN66936.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435197304|gb|ELN81596.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435204842|gb|ELN88499.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435207817|gb|ELN91249.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435214078|gb|ELN96924.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435222285|gb|ELO04407.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435225180|gb|ELO07090.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435225972|gb|ELO07570.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435229276|gb|ELO10654.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435246830|gb|ELO26819.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435246957|gb|ELO26945.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435254425|gb|ELO33820.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435261989|gb|ELO41133.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435262660|gb|ELO41745.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435268965|gb|ELO47518.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435270956|gb|ELO49437.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435273760|gb|ELO51985.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435281774|gb|ELO59425.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435287000|gb|ELO64224.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435292608|gb|ELO69364.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435297229|gb|ELO73521.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435302554|gb|ELO78512.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435326462|gb|ELO98274.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435330828|gb|ELP02069.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435336467|gb|ELP06389.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|436414264|gb|ELP12195.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436424631|gb|ELP22399.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|444854560|gb|ELX79621.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444856487|gb|ELX81517.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444860957|gb|ELX85855.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444868247|gb|ELX92892.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444879846|gb|ELY03936.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444883388|gb|ELY07274.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|451912900|gb|AGF84706.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 878
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|168229633|ref|ZP_02654691.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194468612|ref|ZP_03074596.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194454976|gb|EDX43815.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205335592|gb|EDZ22356.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 878
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|417476479|ref|ZP_12170987.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|353640748|gb|EHC85652.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
Length = 840
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/850 (54%), Positives = 636/850 (74%), Gaps = 10/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLC 850
+ G+QR+C
Sbjct: 831 ENVVGLQRVC 840
>gi|283786032|ref|YP_003365897.1| DNA gyrase subunit A [Citrobacter rodentium ICC168]
gi|282949486|emb|CBG89099.1| DNA gyrase subunit A [Citrobacter rodentium ICC168]
Length = 878
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 649/876 (74%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALIARPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + KV++L++ + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDKVVSLIIPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G+ +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGEDDIA 863
>gi|77163709|ref|YP_342234.1| DNA gyrase subunit A [Nitrosococcus oceani ATCC 19707]
gi|254435120|ref|ZP_05048627.1| DNA gyrase, A subunit [Nitrosococcus oceani AFC27]
gi|76882023|gb|ABA56704.1| DNA gyrase subunit A [Nitrosococcus oceani ATCC 19707]
gi|207088231|gb|EDZ65503.1| DNA gyrase, A subunit [Nitrosococcus oceani AFC27]
Length = 846
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/851 (55%), Positives = 627/851 (73%), Gaps = 11/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A+EV + +E+EM SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MDEIAQEVFPVNIEDEMKHSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMRELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YDA+VRMAQ FS+RC L+DGQGNFGSIDGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDAAVYDAIVRMAQLFSMRCPLIDGQGNFGSIDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYD E EP+VLPTRIPNLL NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLNKETVDFVPNYDESEHEPAVLPTRIPNLLANGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++ + ++ +P SI L+ IP PDFPTAGI+ G + + Y TG+GR+
Sbjct: 181 NIPPHNLGELLSACIALIDDPALSIAGLMSHIPGPDFPTAGIVNGARGIQEAYLTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+TH+E + +II+ ELPY VNK LLEKI LVKEKK+ I LRDESDK G
Sbjct: 241 FMRARTHVETDEGSGKQSIIVTELPYMVNKARLLEKIGNLVKEKKIVGIVGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+V+EL+R+E+PE+VLN+LY TQLQ+ FG+NM+ALV+GQP+LLNLK L F+ HR+E
Sbjct: 301 MRMVVELRRSEMPEVVLNQLYLHTQLQSVFGINMVALVDGQPQLLNLKLALEAFLRHRQE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AH+LEGL IAL NID+ I +I+++S+P EA++ +I W V
Sbjct: 361 VVTRRTMFELRKARERAHVLEGLAIALANIDSIIALIKASSSPAEARDGLIARFWPPGVV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + K+ LQ D Y+LS QAQ IL+M L RLT +EQ KII++YE
Sbjct: 421 IDMLQRAGAESSQPEKLETAYGLQ-QDGYRLSPAQAQAILEMRLHRLTGLEQSKIIDEYE 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
VI ++ L +IL+N +R++ +I +E ++ +Y + RR+EI N ++ EDLI
Sbjct: 480 QVIIFILGLLEILANPERLMAVIREEFMEMREQYSTP----RRTEIQDNHVDLRLEDLIQ 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++V+TLS+ GY KSQ + YR+QKRGG+GK A K+ED+I++LFIANTHD +LCFS+
Sbjct: 536 EENVVVTLSHSGYAKSQTLDTYRSQKRGGKGKSATAMKEEDFIDKLFIANTHDTLLCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YW KV+++PQGSR +RGKP +N+ L+ E+I +L + R+F K+ Y+FM T+
Sbjct: 596 RGKVYWKKVYELPQGSRVARGKPFVNLLPLEEGERINTVLSI----REFEKDKYIFMVTA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L++FS PR SGIIA++L D L+GA LTDG +IMLFS GK +RF+E V
Sbjct: 652 SGVVKKTSLADFSRPRSSGIIALDLREGDQLVGADLTDGVQEIMLFSSGGKVIRFSERDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R +GR+ARGV GM L + +VIAL+++ + ++LTATE GYGKRT I EY RG +G
Sbjct: 712 RPVGRTARGVKGMELPSEHRVIALIIAAS--GTILTATELGYGKRTAIAEYRLQGRGGRG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
IISI+T RNG+VV A V + E++LI+ GG LIRT V I MGR+TQGV LI ++
Sbjct: 770 IISIRTTPRNGEVVGAVQVEKEDEVVLISDGGTLIRTPVDNISLMGRNTQGVKLINLQEG 829
Query: 841 SKLCGVQRLCK 851
+L G++R+ +
Sbjct: 830 ERLVGIERIVE 840
>gi|336251308|ref|YP_004595018.1| DNA gyrase subunit A [Enterobacter aerogenes KCTC 2190]
gi|334737364|gb|AEG99739.1| DNA gyrase subunit A [Enterobacter aerogenes KCTC 2190]
Length = 877
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 645/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLIARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ N + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDNAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL ++K ++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLHILGSADRLMEVIREELELVKEQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIIPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDDDIA 863
>gi|296103860|ref|YP_003614006.1| DNA gyrase subunit A [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058319|gb|ADF63057.1| DNA gyrase subunit A [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 878
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/879 (53%), Positives = 647/879 (73%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGKDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIIPRGEG-AILTVTQNGYGKRTAEGEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + ++ + +IDG A G +A V
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDDIAPEV 866
>gi|420259190|ref|ZP_14761905.1| DNA gyrase subunit A [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404513333|gb|EKA27153.1| DNA gyrase subunit A [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 885
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/851 (54%), Positives = 632/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + +I L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENITIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I S+W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIASSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGGDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK +Y ++RR+EI N + + EDLI
Sbjct: 480 ELLTVIAELIFILENPERLMEVIREELVAIKEQY----NDVRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDG+ ++MLFS GK VRF E+ V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGTNEVMLFSALGKVVRFPESQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|429082133|ref|ZP_19145220.1| DNA gyrase subunit A [Cronobacter condimenti 1330]
gi|426549087|emb|CCJ71261.1| DNA gyrase subunit A [Cronobacter condimenti 1330]
Length = 878
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/871 (54%), Positives = 642/871 (73%), Gaps = 13/871 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DLDKET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLDKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + S+ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDPKNGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMPLKDILAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR TP EAK +I + W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRRAPTPSEAKAGLIANAWELGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGIRDGK-YWLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELVRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+ +Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLKDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G+ ++MLFS GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRTAGIIAVNLNEGDELIGVDLTAGNDEVMLFSAQGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+RL + V++L+V + ++LTAT+NGYGKRT ++EY +R TKG
Sbjct: 712 RPMGRTATGVRGIRLGEGDSVVSLIVPRGEG-AILTATQNGYGKRTAVEEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTDRNGPVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
+ G+QR+ + ++ + +IDG A G
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEG 858
>gi|392551523|ref|ZP_10298660.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
spongiae UST010723-006]
Length = 898
Score = 973 bits (2514), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/874 (54%), Positives = 635/874 (72%), Gaps = 33/874 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WN
Sbjct: 1 MTDLANEILPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K++++LL DL+KET+D++ NYDG EK P+VLPTR+PNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKMAHQLLADLEKETVDYVDNYDGTEKIPAVLPTRVPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G L V+ NPE I +LI IP PDFPTAGII G + Y TG+G+V
Sbjct: 181 NIPPHNLSEVINGCLAVIENPEIQIEELIDYIPGPDFPTAGIISGKKGIEQAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK ++ + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YIRAKAEVQVNEKTGKETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q FGMNM+AL NGQPKLLNLKE+L F+ HR+E
Sbjct: 301 MRIVIEIKRGEVGEVVLNNLYAQTQMQTVFGMNMVALDNGQPKLLNLKEMLEAFVTHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH LEGL IAL NID I++IR + T +EAK ++ +W L +V
Sbjct: 361 VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIEVIRRSQTREEAKVALLSRSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ K + +++ ++ + Y LS+ QA IL + L +LT +E +KI+N+
Sbjct: 421 KGML--EKAGEDDVARPEWLAPDLGIRDGQYNLSEAQANAILDLRLHKLTGLEHEKILNE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L ILS +R++E+I +EL IK +G RR+EI A + S EDL
Sbjct: 479 YKELLDLIAELLYILSTPERLMEVIREELVEIKENFGDE----RRTEITAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 ITEEDVVVTLSHEGYVKYQPLSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ YV M+
Sbjct: 595 STSGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITTILPV----REYEEDKYVLMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +S R SGIIA+NL+ D LIGA +TDG+ DIMLF+D GK VRFNE
Sbjct: 651 TANGTVKKTPLKAYSRQRASGIIAINLNEGDSLIGADITDGTNDIMLFTDHGKVVRFNEK 710
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+++ KV++L+V N VLT T
Sbjct: 711 QRDSESGEVKLDPETGEELLALRPMGRTATGVRGIKMPDDVKVVSLIVPKNDG-PVLTIT 769
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRTL+++Y +R T+G++SIK ++RNGKVV A V EIM+I+ G L+RTR
Sbjct: 770 ENGYGKRTLLEDYPAKSRATQGVVSIKVSERNGKVVGAVQVEDNDEIMIISNKGTLVRTR 829
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
V+E+ +GR+TQGVILI + ++ G+QR+ +I
Sbjct: 830 VNEVSTVGRNTQGVILIRTADDEQVVGLQRIDEI 863
>gi|317048908|ref|YP_004116556.1| DNA gyrase subunit A [Pantoea sp. At-9b]
gi|316950525|gb|ADU70000.1| DNA gyrase, A subunit [Pantoea sp. At-9b]
Length = 879
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/879 (53%), Positives = 646/879 (73%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+++LL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHDLLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + S+ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLREVINGCLAYIDDENISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R III ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVEADAKSGRETIIIHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKIMALKEILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL I+L NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAISLANIDPIIELIRRAPTPAEAKAGLIAQSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEAEFGIRDGRYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL++++R++E+I +EL +++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILASAERLMEVIREELEAMRDQFGDD----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIA+NL +D LIG ALT+GS + MLFS +GK VRF E +V
Sbjct: 652 DGTVKKTALQEFSRPRSAGIIAINLREDDELIGVALTNGSDETMLFSAAGKVVRFAEAAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGRSA GV G++L + KV++L+V ++ ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRSASGVRGIKLAEGDKVVSLIVP-REEGAILTVTQNGYGKRTANSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVVGAVQVDDSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + ++ + +IDG A G +A V
Sbjct: 831 ENVVGLQRVAEPVEEEE---LDSIDGSVAEGDDDIAPEV 866
>gi|157144816|ref|YP_001452135.1| DNA gyrase subunit A [Citrobacter koseri ATCC BAA-895]
gi|157082021|gb|ABV11699.1| hypothetical protein CKO_00543 [Citrobacter koseri ATCC BAA-895]
Length = 878
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLKEVINGCLAYIDDEDISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEI+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIEMIRRAPTPAEAKAALISRSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIIPRGEG-AILTVTQNGYGKRTAEGEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDEDIA 863
>gi|423140897|ref|ZP_17128535.1| DNA gyrase, A subunit [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379053451|gb|EHY71342.1| DNA gyrase, A subunit [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 878
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 645/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIEMIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I+ ++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIREQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|365971409|ref|YP_004952970.1| DNA gyrase subunit A [Enterobacter cloacae EcWSU1]
gi|365750322|gb|AEW74549.1| DNA gyrase subunit A [Enterobacter cloacae EcWSU1]
Length = 878
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 648/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKASLIARPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELELVRDQFGDE----RRTEITANSSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 REDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDTVVSLIVPRGEG-AILTVTQNGYGKRTAESEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDEIA 863
>gi|289208383|ref|YP_003460449.1| DNA gyrase subunit alpha [Thioalkalivibrio sp. K90mix]
gi|288944014|gb|ADC71713.1| DNA gyrase, A subunit [Thioalkalivibrio sp. K90mix]
Length = 870
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/854 (55%), Positives = 635/854 (74%), Gaps = 15/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKE+ + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N +N
Sbjct: 1 MAEFAKEIFPVNLEDEMQQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YDA+VRMAQ FS+R L DGQGNFGSIDGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDAIVRMAQPFSMRYMLADGQGNFGSIDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I+ ELL D+DKET+DFI NYDG E EP+VLP++ PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMARIAAELLADIDKETVDFIDNYDGSETEPAVLPSKFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+ + ++ +PE SI L++ +P PDFPTAGII G+ V + Y TG+GRV
Sbjct: 181 NIPPHNLREVINACVALIDDPEISIEGLMEHVPGPDFPTAGIINGVEGVREAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA++H+E R AI++ ELPYQVNK L EKI++LVKEK+++ IS LRDESDK G
Sbjct: 241 LIRARSHVEPLEGGQREAIVVTELPYQVNKARLTEKIAELVKEKRIDGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR E+ E+VLN LY TQ+QN FG+N++ALV+GQPK+L+L+++L F+ HR+E
Sbjct: 301 MRLVIELKRGEMAEVVLNHLYMHTQMQNVFGINIVALVDGQPKVLDLRQVLESFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIF+LRKARE AHILEGL IAL NID I++IR+ P EAK ++ +W L V
Sbjct: 361 VVTRRTIFDLRKARERAHILEGLAIALANIDPVIELIRAAPNPAEAKAGLLARSWPLGVV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQ--NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S ++ + + S+ +++ +D Y+LS+ QAQ IL + L RLT +EQ KI+++
Sbjct: 421 SDML---DRAGASASRPEDLAADYGVGDDGYRLSEAQAQAILDLRLHRLTGLEQDKILDE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y ++ + DL DIL + +R+ + I +EL + ++G RRSEI N + EDL
Sbjct: 478 YRELLDLIEDLLDILGSGERLQQEIRNELLAVAEQFGDE----RRSEIRERQANLTLEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP+++YRAQ+RGGRGK A K+ED++++L +ANTHD +LCF
Sbjct: 534 IGEEDVVVTLSHAGYVKYQPVADYRAQRRGGRGKAAASFKEEDFVDRLLVANTHDTVLCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YWLKV+++PQGSR SRGKPI+N+ L+ E+I ILP+ R++ ++YVFM
Sbjct: 594 SSRGRVYWLKVYELPQGSRASRGKPIVNLLPLEADERINAILPV----REYDPDHYVFMV 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L++FS R +GIIAV+L ++D+L+ +LTDG D+ML + +GKAVRF+EN
Sbjct: 650 TARGTVKKTPLTDFSRRRSTGIIAVDLRDDDYLVDVSLTDGQMDVMLVTTAGKAVRFSEN 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+A GV G+R+E +VIALL N + + L ATENGYGKRT E+ H RG
Sbjct: 710 DVRPMGRTACGVRGVRMESDHRVIALL--NVAEGAALLATENGYGKRTRFDEFPVHRRGG 767
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I I+T RNG +V A V E MLITTGG L+RT V +I +GR+TQGV LI ++
Sbjct: 768 QGVIGIQTEGRNGPLVGAARVLEDDEAMLITTGGTLVRTPVDQIPLIGRNTQGVRLIRLD 827
Query: 839 NKSKLCGVQRLCKI 852
+L + R+ K+
Sbjct: 828 EGERLVELARVEKL 841
>gi|161502573|ref|YP_001569685.1| DNA gyrase subunit A [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|160863920|gb|ABX20543.1| hypothetical protein SARI_00617 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 878
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 645/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIEMIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|383814551|ref|ZP_09969971.1| DNA gyrase subunit A [Serratia sp. M24T3]
gi|383296628|gb|EIC84942.1| DNA gyrase subunit A [Serratia sp. M24T3]
Length = 882
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/869 (54%), Positives = 642/869 (73%), Gaps = 16/869 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAFIEDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+L LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKILGLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR+ TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRAAPTPAEAKAGLIARSWDLGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G + + K I ++ Y L++ QAQ IL + LQ+LT +E +K+++
Sbjct: 421 SAMLASAGDDAARPEWLEKQFGI----HDGKYFLTEQQAQAILDLRLQKLTGLEHEKLLD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL N R++E+I +EL I+++Y + RR+EI N + + ED
Sbjct: 477 EYKELLTQIAELIFILENPDRLMEVIREELEAIRDQY----NDARRTEITANTSDINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD IL
Sbjct: 533 LINQEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILM 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYW+KV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + +VFM
Sbjct: 593 FSSRGRLYWMKVYQLPEASRGARGRPIINLLPLEPNERITAILPV----REYEEGRHVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L++FS PR +GIIA+NL+ D LIG LTDGS ++MLFS +GK VRF+E
Sbjct: 649 ATASGTVKKTALTDFSRPRSAGIIAINLNEGDELIGVDLTDGSNEVMLFSAAGKVVRFSE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+VR+MGR+A GV G+RL + V++L+V ++LT TENG+GKRT EY +R
Sbjct: 709 QAVRSMGRTATGVRGIRLGETDSVVSLIVPRGDG-AILTVTENGFGKRTESAEYPTKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ K+GR+TQGV LI
Sbjct: 768 TQGVISIKVSERNGPVVGAIQVDDADQIMMITDAGTLVRTRVSEVSKVGRNTQGVTLIRT 827
Query: 838 ENKSKLCGVQRLCKITMIKKYIPVITIDG 866
+ + G+QR+ + ++ V T++G
Sbjct: 828 ADDEHVVGLQRVAEPVEDEELDGVATVEG 856
>gi|444350369|ref|YP_007386513.1| DNA gyrase subunit A (EC 5.99.1.3) [Enterobacter aerogenes EA1509E]
gi|443901199|emb|CCG28973.1| DNA gyrase subunit A (EC 5.99.1.3) [Enterobacter aerogenes EA1509E]
Length = 877
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLIARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ N + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDNAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL ++K ++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLHILGSADRLMEVIREELELVKEQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIIPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDDDIA 863
>gi|388456604|ref|ZP_10138899.1| DNA gyrase subunit A [Fluoribacter dumoffii Tex-KL]
Length = 865
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/849 (55%), Positives = 633/849 (74%), Gaps = 10/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MVYLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYLLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ LL DL+KET+DF NYD E P VLP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKVAHALLADLEKETVDFSPNYDETEFAPVVLPSRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ + ++ NPE S++++++IIP PDFPTA II G + + GY TGKGR
Sbjct: 181 NIPPHNLTEVINACIALVDNPELSLDEIMEIIPGPDFPTAAIINGRAGIIQGYRTGKGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IIRA+T IE R AIII ELPYQVNK L+E+I++LV++KK+E IS LRDESDK G
Sbjct: 241 IIRARTEIETDEDSGRQAIIITELPYQVNKARLVERIAELVRDKKIEGISGLRDESDKQG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE+ +++LN LY TQ+QN FG+NM+ALV+GQP+ LNLK+IL YFI HR+E
Sbjct: 301 MRVVIELKRNEVADVILNNLYAHTQMQNVFGINMVALVDGQPRTLNLKQILEYFIKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+L+KAR AHILEGL IAL NID I +I+ + TPQ+AK ++ W V
Sbjct: 361 VVTRRTLFDLKKARSRAHILEGLGIALANIDEMIALIKQSPTPQDAKEALLAKLWEPGMV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + + L N YKLS+ QAQ IL++ L RLT +EQ KI+ ++E
Sbjct: 421 KSMLERAGSDASRPDDLAAEFGLAANG-YKLSETQAQAILELRLHRLTALEQDKILGEFE 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + +L +IL++ +R++++I DE IK ++G RR+EI + + + EDLI
Sbjct: 480 ELLQLIRELLEILASPERLMQVIRDEFLEIKAQFGDE----RRTEITASQEDLTIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++V+TLS+ GY+K QP++ Y+AQ+RGG+GK A KDED++++L IA+THD +LCFSN
Sbjct: 536 EENVVVTLSHQGYVKYQPLTAYQAQRRGGKGKSATNVKDEDFVSRLVIASTHDTLLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+LYWLK +Q+P SR SRG+PIIN+ L E+I +LP+ R++ YVFM+T
Sbjct: 596 HGKLYWLKAYQLPLASRISRGRPIINILPLAEGEEINAMLPV----REYLDGYYVFMATK 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKK L FS PR +GIIAV+L +D L+G +TDGS DIMLF+D+GK VRF+EN V
Sbjct: 652 KGTVKKVPLDAFSRPRSNGIIAVDLDEDDSLVGVDITDGSKDIMLFTDAGKVVRFDENKV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+R+E+ Q VI+L+V++ + ++LTATENGYGKRT I+EY RG +G
Sbjct: 712 RPMGRTARGVRGIRIEEGQAVISLVVAHPEG-TILTATENGYGKRTSIEEYRVSGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI+ +RNGKVV + V E MLIT G L+R R++E+ +GR+TQGV LI V
Sbjct: 771 VISIQVTERNGKVVRSVQVTDADEAMLITDKGTLVRFRINELSVIGRNTQGVRLINVSPG 830
Query: 841 SKLCGVQRL 849
K+ G+Q++
Sbjct: 831 EKVVGMQKI 839
>gi|238785705|ref|ZP_04629680.1| DNA gyrase subunit A [Yersinia bercovieri ATCC 43970]
gi|238713390|gb|EEQ05427.1| DNA gyrase subunit A [Yersinia bercovieri ATCC 43970]
Length = 892
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/851 (55%), Positives = 629/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDYVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R III E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVEADAKTGRETIIIHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGGDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTAIAELIFILENPERLMEVIREELVAIKEQY----SDARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPETQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|345869282|ref|ZP_08821240.1| DNA gyrase, A subunit [Thiorhodococcus drewsii AZ1]
gi|343923205|gb|EGV33897.1| DNA gyrase, A subunit [Thiorhodococcus drewsii AZ1]
Length = 882
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/856 (53%), Positives = 641/856 (74%), Gaps = 17/856 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FA+EV+ I LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+MHE N+WN
Sbjct: 1 MPDFAREVLPINLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMHEQGNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K ARVVG+ MGKYHPHGD +IYD +VRMAQ FS+R LVDGQGNFGS+DGD AAM
Sbjct: 61 RAYRKSARVVGDVMGKYHPHGDSAIYDTMVRMAQPFSMRYLLVDGQGNFGSVDGDPPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS LL DLDK+T+DFI NYD E EPSVLP R PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMKRISESLLDDLDKDTVDFIPNYDNTEHEPSVLPARFPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVID L ++ NP +I +L++++P PDFPTAG+I G+ + + Y TG+GR
Sbjct: 181 NIPPHNLREVIDACLAIIDNPLVTIEELMELVPGPDFPTAGLINGIRGIREAYRTGRGRC 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISN--LRDESDK 298
++RA+T E R R AI++ ELPYQVNK LLE+I++LVK+KK++ I+ LRDESDK
Sbjct: 241 VMRARTTTEVQKRSGREAIVVTELPYQVNKARLLERIAELVKDKKIDGIAQDGLRDESDK 300
Query: 299 SGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHR 358
GMRIVIELKR+ E++LN LY+ TQ+Q FG+NM+ALV+GQP LN+K+ L YF+ HR
Sbjct: 301 DGMRIVIELKRDAHAEVLLNNLYQHTQMQQVFGINMVALVDGQPLTLNIKQTLEYFLRHR 360
Query: 359 KEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLP 418
++V+ RRT++ELRKAR+ AH+LEG IAL NID I I+++++P EA+ +++E W LP
Sbjct: 361 RDVVTRRTLYELRKARDRAHVLEGYAIALANIDEVIATIKASASPAEARERLMERAW-LP 419
Query: 419 DVSKIIGFNKKNYNTISKINNISK--LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
+IG ++ ++ ++++ ++D Y+LS+ QA+ IL++ L RLT +EQ+KI+
Sbjct: 420 --GAVIGMLERTGAETTRPDDLAAGLGLSDDGYRLSERQAKAILELQLHRLTGLEQEKIL 477
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
++E +++++ L ILS+ R++E+I +EL +++++G RR+EI ++ + + E
Sbjct: 478 KEFEEILERIAALLLILSDPDRLMEVIREELIAVRDQFGDD----RRTEIQIDHTDLTLE 533
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLIA +++V+TLS+ GY K+QPIS+Y+AQ+RGGRGK A ++ED+I+++F+AN+ D +L
Sbjct: 534 DLIAPEEVVVTLSHQGYAKAQPISDYQAQRRGGRGKSATSFREEDFIDRIFVANSRDTVL 593
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CFS+ GR+YWLKV++ PQ R +RG+P++N+ L+ E+I +LP+ RD+ + YVF
Sbjct: 594 CFSSRGRVYWLKVYEFPQAGRGARGRPMVNLLPLEADERINAMLPV----RDYEEGYYVF 649
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
M+TS G VKKT L FS P GIIA++L ++++LIG A+TDG+ D+MLF+ +GKAVRF+
Sbjct: 650 MATSAGTVKKTPLQVFSRPLSRGIIAIDLRDDEYLIGVAITDGNQDLMLFTSAGKAVRFS 709
Query: 717 ENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNR 776
E+ VRAMGR+A GV G+ L++ Q+VI+L+V + +VL+ TE+GYGKRT I+E+ R
Sbjct: 710 EDQVRAMGRTAHGVRGVTLKEGQEVISLVVP--EPGTVLSVTEHGYGKRTRIEEFPTKGR 767
Query: 777 GTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILIT 836
GT+G+I I T++RNG V A LV EIMLIT GG LIRT V EI +GR+ QGV LI
Sbjct: 768 GTQGVIGISTSERNGAQVGAVLVRPGDEIMLITEGGTLIRTTVDEIPTVGRNAQGVKLIN 827
Query: 837 VENKSKLCGVQRLCKI 852
+ +L V+R+ +
Sbjct: 828 LAEGERLVYVERIVAL 843
>gi|410086891|ref|ZP_11283598.1| DNA gyrase subunit A [Morganella morganii SC01]
gi|409766725|gb|EKN50815.1| DNA gyrase subunit A [Morganella morganii SC01]
Length = 871
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/853 (54%), Positives = 630/853 (73%), Gaps = 12/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MSDNAKEILPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMKELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++Y+ +VR+AQ FS+R LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDIAVYETIVRLAQPFSMRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL D+DKET+DF+ NYDG E P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADIDKETVDFVPNYDGTEMIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + + + SI L++ IP PDFPTA II G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGILDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II++E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 HIRARAEVETDEKTGRETIIVNEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL GQPK+LNLKEIL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYLLTQMQTTFGINMVALHQGQPKILNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE AHILEGL IAL NID I++IR TP EAK ++ W L V
Sbjct: 361 VVTRRTIYELRKARERAHILEGLAIALANIDPIIELIRRAPTPAEAKAGLLAQAWELGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + ++ +++ +Y L+++QAQ IL + LQ+LT +E +K++++Y
Sbjct: 421 AAMLAGAGDDAARPEGLDEQFGIRDG-LYHLTEVQAQAILDLRLQKLTGLEHEKLLDEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + L IL + +R++E+I +EL +K ++ RR++I N + + EDLI+
Sbjct: 480 ELLELIAGLLHILQSPERLMEVIREELVAVKEQFNDK----RRTDITENTADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFSN
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNK--EKITVILPLSNNKRDFPKNNYVFMS 658
G+LYWLKV+Q+P+ SR +RG+PIIN+ L + E+IT ILP+ R++ + +VFM+
Sbjct: 596 KGKLYWLKVYQLPEASRGARGRPIINILPLDQEQNERITAILPV----REYEEGKFVFMA 651
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E+
Sbjct: 652 TASGTVKKTSLQDFSRPRNAGIIAVNLNEGDELIGVDLTDGSNEVMLFSADGKVVRFAED 711
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
+VRAMGR+A GV G+RL V++L++ + + +LT TENGYGKRT EY +R T
Sbjct: 712 AVRAMGRTATGVRGIRLGDDDAVVSLIIPRGEGE-ILTVTENGYGKRTAEAEYPTKSRAT 770
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 QGVISIKVSERNGKVVGAIQVGADDQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTG 830
Query: 839 NKSKLCGVQRLCK 851
+ K+ G+QR+ +
Sbjct: 831 EEEKVVGLQRVAE 843
>gi|238760197|ref|ZP_04621343.1| DNA gyrase subunit A [Yersinia aldovae ATCC 35236]
gi|238701576|gb|EEP94147.1| DNA gyrase subunit A [Yersinia aldovae ATCC 35236]
Length = 884
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/851 (54%), Positives = 632/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L ++ + +I+ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEVIDGCLALIEDENITIDGLMEFIPGPDFPTAAIINGRRGIDEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YVRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKEILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTLIAELIFILENPERLMEVIREELVAIKEQY----NDARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDG+ ++MLFS GK VRF E+ V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGTNEVMLFSALGKVVRFPESQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|238797460|ref|ZP_04640959.1| DNA gyrase subunit A [Yersinia mollaretii ATCC 43969]
gi|238718731|gb|EEQ10548.1| DNA gyrase subunit A [Yersinia mollaretii ATCC 43969]
Length = 892
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/851 (55%), Positives = 629/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R III E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVEADAKTGRETIIIHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGGDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTAIAELIFILENPERLMEVIREELVAIKEQY----NDARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPETQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|304398195|ref|ZP_07380069.1| DNA gyrase, A subunit [Pantoea sp. aB]
gi|440760445|ref|ZP_20939557.1| DNA gyrase subunit A [Pantoea agglomerans 299R]
gi|304354061|gb|EFM18434.1| DNA gyrase, A subunit [Pantoea sp. aB]
gi|436425818|gb|ELP23543.1| DNA gyrase subunit A [Pantoea agglomerans 299R]
Length = 890
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYL YAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLGYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+++LL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHDLLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + N + SI +L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLREVINGCLAYIENEDISIEELMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R III ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVEADAKTGRETIIIHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMALKEILDAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR P EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPNPAEAKAGLIAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + ++ +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLDPQYGIRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L ILS++ R++E+I +EL ++++++G RR+EI N + + EDLI
Sbjct: 480 GLLEQIAELLRILSDADRLMEVIREELELMRDQFGDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
LG VKKT L FS PR +GIIAVNL ++D LIG ALT+G+ + MLFS +GK VRF E +V
Sbjct: 652 LGTVKKTALKEFSRPRSAGIIAVNLRDDDELIGVALTNGNDEAMLFSAAGKVVRFAETAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G+RL + +V++L+V ++ +++T T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTASGVRGIRLAEGDRVVSLIVP-REEGAIMTVTQNGYGKRTANSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G+ +A
Sbjct: 831 ENVVGLQRVAEPVEEEE---LDSIDGSVAEGEDDIA 863
>gi|51595600|ref|YP_069791.1| DNA gyrase subunit A [Yersinia pseudotuberculosis IP 32953]
gi|51588882|emb|CAH20496.1| DNA gyrase subunit A [Yersinia pseudotuberculosis IP 32953]
Length = 897
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/851 (55%), Positives = 628/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR STP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRASTPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N R++E+I +EL IK +Y ++RR+EI N + + EDLI
Sbjct: 480 ELLTLIGELIFILENPDRLMEVIREELVAIKEQY----NDLRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPEGQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|186894663|ref|YP_001871775.1| DNA gyrase subunit A [Yersinia pseudotuberculosis PB1/+]
gi|186697689|gb|ACC88318.1| DNA gyrase, A subunit [Yersinia pseudotuberculosis PB1/+]
Length = 891
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/851 (55%), Positives = 628/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR STP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRASTPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N R++E+I +EL IK +Y ++RR+EI N + + EDLI
Sbjct: 480 ELLTLIGELIFILENPDRLMEVIREELVAIKEQY----NDLRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPEGQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|153949955|ref|YP_001401731.1| DNA gyrase subunit A [Yersinia pseudotuberculosis IP 31758]
gi|152961450|gb|ABS48911.1| DNA gyrase, A subunit [Yersinia pseudotuberculosis IP 31758]
Length = 897
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/851 (55%), Positives = 628/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR STP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRASTPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N R++E+I +EL IK +Y ++RR+EI N + + EDLI
Sbjct: 480 ELLTLIGELIFILENPDRLMEVIREELVAIKEQY----NDLRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPEGQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|383316403|ref|YP_005377245.1| DNA gyrase subunit A [Frateuria aurantia DSM 6220]
gi|379043507|gb|AFC85563.1| DNA gyrase, A subunit [Frateuria aurantia DSM 6220]
Length = 876
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/851 (54%), Positives = 627/851 (73%), Gaps = 16/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + +E+EM +SYLDYAMSVIVGRALPD RDGLKPVHRR+L+ MHE +N WN
Sbjct: 1 MAELAKEIIRVNIEDEMRQSYLDYAMSVIVGRALPDARDGLKPVHRRILYGMHEQSNSWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RPF K AR+VG+ MGKYHPHGD SIYDA+VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPFKKSARIVGDVMGKYHPHGDSSIYDAIVRMAQPFSLRYLLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL D+DKET+DF NYD E EP VLPT++PNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMTKLTHELLADIDKETVDFGPNYDESEHEPLVLPTKVPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
N+PPHNL+EVI + ++ PE SI DL+ IP PDFPTAGII G S + D Y TG+GR+
Sbjct: 181 NVPPHNLSEVIAATIALIDEPELSIEDLMAYIPGPDFPTAGIINGSSGIIDAYKTGRGRI 240
Query: 241 IIRAKTHIE-EFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+IRA+T IE E N R I++ ELPYQVNK L+EKI++LVKEKKLE IS LRDESDK
Sbjct: 241 LIRARTEIETEAN--GRETILVHELPYQVNKARLIEKIAELVKEKKLEGISELRDESDKD 298
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIE++R+ + ++VLN L++QTQLQ TFG+NM+AL++GQP+LL+LKEIL FI HR+
Sbjct: 299 GMRMVIEIRRDAMADVVLNNLFQQTQLQVTFGINMVALLDGQPRLLDLKEILVAFIRHRR 358
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRTIF+LRKAR AH+LEGLT+AL NID I++I+++ +PQEA+ +++ W
Sbjct: 359 EVVTRRTIFDLRKARARAHLLEGLTVALANIDEMIELIKTSPSPQEARERLLARRWQPGM 418
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
VS ++ + + ++ L N Y+LS++QAQEIL M L RLT +EQ+K+ ++Y
Sbjct: 419 VSTLLAAAGADASRPEDMDPRDGL-NAQGYQLSELQAQEILAMRLHRLTGLEQEKLSDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDL 538
++ + DL +IL + R++ +I +EL IK YG ++ I+ S+ LN + DL
Sbjct: 478 RQILDAIRDLIEILEDPARLLNVIREELEAIKADYGDGRRTEIQHSQEDLNVL-----DL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+TLS+ GYIK QP S YRAQKRGG+G+ A K+ED++ QL++ NTHD +L F
Sbjct: 533 IAPEDVVVTLSHAGYIKRQPASAYRAQKRGGKGRSASALKNEDFVEQLWVVNTHDTLLTF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YWLKV+Q+P+ +RGKPI+N+ L E + +LP+ R++ ++ +VF +
Sbjct: 593 SSTGRVYWLKVYQMPEAGSGARGKPIVNLLPLAEGETVQAVLPV----REYSEDQFVFFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT L+ F+ + G IA+NL D L+G ALTDG D+++F+ +GK VRF+E
Sbjct: 649 TRKGTVKKTPLTEFAYQLQKGKIAINLDESDALVGVALTDGESDVLMFASNGKTVRFDEG 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR+MGR+A GV GM+L +V++++V+ ++ +LTATE GYGKRT + E+ K RGT
Sbjct: 709 EVRSMGRTAGGVRGMKLADDAQVVSMIVA--REGDILTATERGYGKRTPLDEFPKKGRGT 766
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I I+ + RNG +VAA V HE+MLI+ G L+RTRV+E+ ++ R+TQGV LI +
Sbjct: 767 QGVIGIQCSDRNGPLVAAVQVTEAHELMLISNQGTLVRTRVAEVSQLSRNTQGVTLIRLP 826
Query: 839 NKSKLCGVQRL 849
L V RL
Sbjct: 827 ADEALVRVVRL 837
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 552 GYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQ 611
G +K P++E+ Q + +GK A+ + D + + + + +L F++ G K +
Sbjct: 652 GTVKKTPLTEFAYQLQ--KGKIAINLDESDALVGVALTDGESDVLMFASNG-----KTVR 704
Query: 612 IPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSN 671
+G S G+ + +K + V+ + + D + +T G K+T L
Sbjct: 705 FDEGEVRSMGRTAGGVRGMKLADDAQVVSMIVAREGD------ILTATERGYGKRTPLDE 758
Query: 672 FSNPRK----SGIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRS 726
F P+K G+I + S+ + L+ A ++++ML S+ G VR V + R+
Sbjct: 759 F--PKKGRGTQGVIGIQCSDRNGPLVAAVQVTEAHELMLISNQGTLVRTRVAEVSQLSRN 816
Query: 727 ARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENG 761
+GV +RL + ++ ++ + + ++ + ++G
Sbjct: 817 TQGVTLIRLPADEALVRVVRLDAEDEADIELDDDG 851
>gi|350564008|ref|ZP_08932827.1| DNA gyrase, A subunit [Thioalkalimicrobium aerophilum AL3]
gi|349778008|gb|EGZ32367.1| DNA gyrase, A subunit [Thioalkalimicrobium aerophilum AL3]
Length = 875
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/846 (55%), Positives = 631/846 (74%), Gaps = 10/846 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++FA+E+ I LEEEM +SYL YAMSVI+GRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSEFAREIHPISLEEEMKQSYLSYAMSVIIGRALPDVRDGLKPVHRRVLFAMNELHNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDNPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF NYDG E EP+VLP+RIPNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDFTPNYDGSESEPNVLPSRIPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ L + NP+ + LI+ +P PDFPT GII G + + Y TG+GRV
Sbjct: 181 NIPPHNLTETINACLAYIENPDIDVAGLIEHMPGPDFPTYGIINGTRGIREAYETGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKT IE ++ + AII++E+PYQVNK L+E+I++L+KEKK++ I+ LRDESDK G
Sbjct: 241 QIRAKTQIET-DKSGKQAIIVNEIPYQVNKAKLIERIAELIKEKKIDGITALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E ++++N LYK T +Q FG+NM+AL+NGQPKLLNL++I+ F+ HR+E
Sbjct: 300 MRIVIELRRGENADVMINNLYKLTAMQTVFGINMVALINGQPKLLNLQQIIQAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AH+LEGL +AL+NID I++I+S++T Q AK +++E W V
Sbjct: 360 VVTRRTIFELRKAREKAHLLEGLAVALSNIDEMIELIKSSATSQIAKERMLERDWPAGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++ + N + + + D Y+LS +QAQ IL M L RLT +EQ KI+ +Y+
Sbjct: 420 LQLLERVEANDTRPEDLAAGFGMVSADSYRLSPVQAQAILDMRLNRLTGLEQDKILEEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+I K+ + +IL N R+ E++ +EL +K +YG + RR+EI ++ EDLIA
Sbjct: 480 ALIAKIFEFLEILRNPDRLTEVVREELIAVKEEYG----DARRTEIDHAYLDLDEEDLIA 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D ++TLS GYIK+QP+S+YRAQKRGGRGK A K+ED + Q+ +A+THD +LCFSN
Sbjct: 536 VEDRIVTLSQDGYIKTQPLSDYRAQKRGGRGKSATAMKEEDEVGQILVASTHDMLLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+LYW K WQ+P R +RGKPI+N+F L+ E I+ ILP+S +F +++VFM+T
Sbjct: 596 RGKLYWKKTWQLPLAGRGARGKPIVNVFPLEAGESISSILPVS----EFDDSHFVFMATK 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
IVK+ L++FS PR +GIIA++L + D L+G ALT G D+MLF+D GKA+RF+EN V
Sbjct: 652 HAIVKRVKLADFSRPRANGIIALDLLDGDELVGTALTYGEQDVMLFADGGKAIRFDENDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR ARGV GM+L + Q V+++ ++ +LTATE+G+GK T +++Y+ NRG +G
Sbjct: 712 RVMGRQARGVRGMKLAEGQAVMSMQIA-QANTLILTATEHGFGKCTPVEDYSTINRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIKT RNGKVVAA V E++LIT G L+RTRV+EI +GR+TQGV LI V +
Sbjct: 771 VISIKTTDRNGKVVAAVAVTPDQEVVLITNKGTLVRTRVAEISVVGRNTQGVKLINVGSD 830
Query: 841 SKLCGV 846
+ G+
Sbjct: 831 EWVVGL 836
>gi|401675700|ref|ZP_10807689.1| DNA gyrase subunit A [Enterobacter sp. SST3]
gi|400217083|gb|EJO47980.1| DNA gyrase subunit A [Enterobacter sp. SST3]
Length = 878
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/876 (52%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + + SI L+ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALVSRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELELVRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIIPRGEG-AILTVTQNGYGKRTAEGEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDEDIA 863
>gi|392980010|ref|YP_006478598.1| DNA gyrase subunit A [Enterobacter cloacae subsp. dissolvens SDM]
gi|392325943|gb|AFM60896.1| DNA gyrase subunit A [Enterobacter cloacae subsp. dissolvens SDM]
Length = 878
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 645/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL +I++++G RR+EI N + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELELIRDQFGDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGKDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIIPRGEG-AILTVTQNGYGKRTAEGEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDDIA 863
>gi|62180845|ref|YP_217262.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|378984834|ref|YP_005247989.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|62128478|gb|AAX66181.1| DNA gyrase, subunit A, type II topoisomerase [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|312913262|dbj|BAJ37236.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
Length = 878
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDFAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|420373909|ref|ZP_14873972.1| DNA gyrase, A subunit [Shigella flexneri 1235-66]
gi|391316932|gb|EIQ74317.1| DNA gyrase, A subunit [Shigella flexneri 1235-66]
Length = 878
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/876 (52%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ +W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALVARSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +++ ++G + RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELVREQFG----DARRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + KV++L+V + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDKVVSLIVPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVEDTDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSAAEGDEDIA 863
>gi|168237286|ref|ZP_02662344.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735318|ref|YP_002115344.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194710820|gb|ACF90041.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197289683|gb|EDY29046.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 878
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDFAVYGTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|260598668|ref|YP_003211239.1| DNA gyrase subunit A [Cronobacter turicensis z3032]
gi|260217845|emb|CBA32359.1| DNA gyrase subunit A [Cronobacter turicensis z3032]
Length = 878
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/876 (53%), Positives = 642/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DLDKET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLDKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPT+ II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTSAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDPKNGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMALKEILAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR P EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRRAPNPSEAKAGLIAQAWELGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGIRDGK-YWLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRTAGIIAVNLNEGDELIGVDLTAGKDEVMLFSAQGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+RL + V++L+V + ++LTAT+NGYGKRT ++EY +R TKG
Sbjct: 712 RPMGRTATGVRGIRLGEGDSVVSLIVPRGEG-AILTATQNGYGKRTAVEEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTDRNGPVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDEIA 863
>gi|417359588|ref|ZP_12133924.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|353589083|gb|EHC47958.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
Length = 891
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/849 (54%), Positives = 635/849 (74%), Gaps = 10/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRL 849
+ G+QR+
Sbjct: 831 ENVVGLQRV 839
>gi|200387865|ref|ZP_03214477.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|437324701|ref|ZP_20739813.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|199604963|gb|EDZ03508.1| DNA gyrase, A subunit [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|435193814|gb|ELN78287.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
Length = 878
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|88859277|ref|ZP_01133917.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
tunicata D2]
gi|88818294|gb|EAR28109.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
tunicata D2]
Length = 899
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/874 (54%), Positives = 633/874 (72%), Gaps = 35/874 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MTDRANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++S+ELL DL+KET+D++ NYDG EK P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRMARVSHELLADLEKETVDYVDNYDGTEKIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L +++NP+ +I++LI IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLNEVINGCLALINNPDITIDELIDYIPGPDFPTAAIISGKKGIEQAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E R T II+ ELPYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YIRAKAEVETDERGKET-IIVHELPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR E+ E+VLN LY QT +Q FGMNM+AL NGQPKLLNLKE+L+ F++HR+E
Sbjct: 300 MRIVVEIKRGEVGEVVLNNLYAQTSMQTVFGMNMVALDNGQPKLLNLKEMLHAFVVHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH LEGL IAL NID I++IR + TP EAK ++ W+L V
Sbjct: 360 VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRRSPTPAEAKEALLARPWDLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ ++ + + + Y LS QAQ IL++ L RLT +E +KI+ +Y+
Sbjct: 420 QSMLERTGESNVARPEWLDAELGIRDGQYHLSPQQAQAILELRLHRLTGLEHEKILAEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L ILS+ +R++E+I DEL + K +YG RR+ I A + S EDLI
Sbjct: 480 ELLDLIAELLHILSSPERLLEVIRDELALAKEQYGDE----RRTVITAAAHDISLEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS
Sbjct: 536 EEDVVVTLSHEGYVKYQPLSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCFST 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+P SR +RGKPIIN+ L+ E+IT ILP+ R++ +N Y+FM+T+
Sbjct: 596 AGRLYWLKVYQLPLASRAARGKPIINLLPLEANERITAILPV----REYEENKYIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT L+ +S R SGIIAVNL+ D LIG +TDG+ +IMLFSD+GK VRF E+
Sbjct: 652 FGTVKKTPLTAYSRQRSSGIIAVNLNEGDSLIGVDITDGTNEIMLFSDAGKVVRFKESEE 711
Query: 719 -----------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVL 755
VR MGR+A GV G+++ + Q+V++L+V N S+L
Sbjct: 712 SEVLDENGNLVLDENGQPEIKFKGVRPMGRTATGVRGIKMGEGQRVVSLIVPKNDG-SIL 770
Query: 756 TATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILI 815
T TENGYGKRT +++Y +R T+G++SIK ++RNGKVV A V EIMLI+ G L+
Sbjct: 771 TVTENGYGKRTNLEDYPSKSRATQGVVSIKVSERNGKVVGAVQVLENDEIMLISNRGTLV 830
Query: 816 RTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
RTRV E+ +GR+TQGVILI ++ + G+QR+
Sbjct: 831 RTRVQEVSTVGRNTQGVILIRTIDEELVVGLQRI 864
>gi|170025070|ref|YP_001721575.1| DNA gyrase subunit A [Yersinia pseudotuberculosis YPIII]
gi|169751604|gb|ACA69122.1| DNA gyrase, A subunit [Yersinia pseudotuberculosis YPIII]
Length = 897
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/851 (55%), Positives = 628/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR STP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRASTPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N R++E+I +EL IK +Y ++RR+EI N + + EDLI
Sbjct: 480 ELLTLIGELIFILENPDRLMEVIREELVAIKEQY----NDLRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGCHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPEGQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|22126849|ref|NP_670272.1| DNA gyrase subunit A [Yersinia pestis KIM10+]
gi|45440760|ref|NP_992299.1| DNA gyrase subunit A [Yersinia pestis biovar Microtus str. 91001]
gi|108806927|ref|YP_650843.1| DNA gyrase subunit A [Yersinia pestis Antiqua]
gi|108812921|ref|YP_648688.1| DNA gyrase subunit A [Yersinia pestis Nepal516]
gi|145599746|ref|YP_001163822.1| DNA gyrase subunit A [Yersinia pestis Pestoides F]
gi|149366793|ref|ZP_01888827.1| DNA gyrase subunit A [Yersinia pestis CA88-4125]
gi|165924567|ref|ZP_02220399.1| DNA gyrase, A subunit [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938316|ref|ZP_02226874.1| DNA gyrase, A subunit [Yersinia pestis biovar Orientalis str.
IP275]
gi|166009847|ref|ZP_02230745.1| DNA gyrase, A subunit [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211545|ref|ZP_02237580.1| DNA gyrase, A subunit [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400296|ref|ZP_02305809.1| DNA gyrase, A subunit [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419713|ref|ZP_02311466.1| DNA gyrase, A subunit [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424281|ref|ZP_02316034.1| DNA gyrase, A subunit [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218928375|ref|YP_002346250.1| DNA gyrase subunit A [Yersinia pestis CO92]
gi|229841160|ref|ZP_04461319.1| DNA gyrase subunit A [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229843265|ref|ZP_04463411.1| DNA gyrase subunit A [Yersinia pestis biovar Orientalis str. India
195]
gi|229894119|ref|ZP_04509305.1| DNA gyrase subunit A [Yersinia pestis Pestoides A]
gi|229903351|ref|ZP_04518464.1| DNA gyrase subunit A [Yersinia pestis Nepal516]
gi|270487161|ref|ZP_06204235.1| DNA gyrase, A subunit [Yersinia pestis KIM D27]
gi|294503230|ref|YP_003567292.1| DNA gyrase subunit A [Yersinia pestis Z176003]
gi|384121673|ref|YP_005504293.1| DNA gyrase subunit A [Yersinia pestis D106004]
gi|384125530|ref|YP_005508144.1| DNA gyrase subunit A [Yersinia pestis D182038]
gi|384140924|ref|YP_005523626.1| DNA gyrase subunit A [Yersinia pestis A1122]
gi|384415438|ref|YP_005624800.1| DNA gyrase subunit A [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420545856|ref|ZP_15043913.1| DNA gyrase, A subunit [Yersinia pestis PY-01]
gi|420551169|ref|ZP_15048671.1| DNA gyrase, A subunit [Yersinia pestis PY-02]
gi|420556696|ref|ZP_15053556.1| DNA gyrase, A subunit [Yersinia pestis PY-03]
gi|420562268|ref|ZP_15058446.1| DNA gyrase, A subunit [Yersinia pestis PY-04]
gi|420567288|ref|ZP_15062983.1| DNA gyrase, A subunit [Yersinia pestis PY-05]
gi|420572939|ref|ZP_15068115.1| DNA gyrase, A subunit [Yersinia pestis PY-06]
gi|420578275|ref|ZP_15072944.1| DNA gyrase, A subunit [Yersinia pestis PY-07]
gi|420583625|ref|ZP_15077810.1| DNA gyrase, A subunit [Yersinia pestis PY-08]
gi|420588773|ref|ZP_15082450.1| DNA gyrase, A subunit [Yersinia pestis PY-09]
gi|420594092|ref|ZP_15087242.1| DNA gyrase, A subunit [Yersinia pestis PY-10]
gi|420599758|ref|ZP_15092305.1| DNA gyrase, A subunit [Yersinia pestis PY-11]
gi|420605252|ref|ZP_15097221.1| DNA gyrase, A subunit [Yersinia pestis PY-12]
gi|420610604|ref|ZP_15102059.1| DNA gyrase, A subunit [Yersinia pestis PY-13]
gi|420615909|ref|ZP_15106758.1| DNA gyrase, A subunit [Yersinia pestis PY-14]
gi|420621302|ref|ZP_15111512.1| DNA gyrase, A subunit [Yersinia pestis PY-15]
gi|420626358|ref|ZP_15116094.1| DNA gyrase, A subunit [Yersinia pestis PY-16]
gi|420631555|ref|ZP_15120793.1| DNA gyrase, A subunit [Yersinia pestis PY-19]
gi|420636656|ref|ZP_15125362.1| DNA gyrase, A subunit [Yersinia pestis PY-25]
gi|420642216|ref|ZP_15130382.1| DNA gyrase, A subunit [Yersinia pestis PY-29]
gi|420647383|ref|ZP_15135111.1| DNA gyrase, A subunit [Yersinia pestis PY-32]
gi|420652997|ref|ZP_15140147.1| DNA gyrase, A subunit [Yersinia pestis PY-34]
gi|420658549|ref|ZP_15145143.1| DNA gyrase, A subunit [Yersinia pestis PY-36]
gi|420663863|ref|ZP_15149895.1| DNA gyrase, A subunit [Yersinia pestis PY-42]
gi|420668826|ref|ZP_15154391.1| DNA gyrase, A subunit [Yersinia pestis PY-45]
gi|420674146|ref|ZP_15159234.1| DNA gyrase, A subunit [Yersinia pestis PY-46]
gi|420679693|ref|ZP_15164265.1| DNA gyrase, A subunit [Yersinia pestis PY-47]
gi|420684947|ref|ZP_15168970.1| DNA gyrase, A subunit [Yersinia pestis PY-48]
gi|420690119|ref|ZP_15173554.1| DNA gyrase, A subunit [Yersinia pestis PY-52]
gi|420695925|ref|ZP_15178636.1| DNA gyrase, A subunit [Yersinia pestis PY-53]
gi|420701318|ref|ZP_15183239.1| DNA gyrase, A subunit [Yersinia pestis PY-54]
gi|420707297|ref|ZP_15188106.1| DNA gyrase, A subunit [Yersinia pestis PY-55]
gi|420712624|ref|ZP_15192907.1| DNA gyrase, A subunit [Yersinia pestis PY-56]
gi|420718028|ref|ZP_15197643.1| DNA gyrase, A subunit [Yersinia pestis PY-58]
gi|420723625|ref|ZP_15202459.1| DNA gyrase, A subunit [Yersinia pestis PY-59]
gi|420729221|ref|ZP_15207452.1| DNA gyrase, A subunit [Yersinia pestis PY-60]
gi|420734299|ref|ZP_15212037.1| DNA gyrase, A subunit [Yersinia pestis PY-61]
gi|420739771|ref|ZP_15216968.1| DNA gyrase, A subunit [Yersinia pestis PY-63]
gi|420745136|ref|ZP_15221677.1| DNA gyrase, A subunit [Yersinia pestis PY-64]
gi|420750898|ref|ZP_15226619.1| DNA gyrase, A subunit [Yersinia pestis PY-65]
gi|420756186|ref|ZP_15231198.1| DNA gyrase, A subunit [Yersinia pestis PY-66]
gi|420762012|ref|ZP_15235959.1| DNA gyrase, A subunit [Yersinia pestis PY-71]
gi|420767263|ref|ZP_15240698.1| DNA gyrase, A subunit [Yersinia pestis PY-72]
gi|420772248|ref|ZP_15245177.1| DNA gyrase, A subunit [Yersinia pestis PY-76]
gi|420777661|ref|ZP_15250008.1| DNA gyrase, A subunit [Yersinia pestis PY-88]
gi|420783199|ref|ZP_15254859.1| DNA gyrase, A subunit [Yersinia pestis PY-89]
gi|420788543|ref|ZP_15259569.1| DNA gyrase, A subunit [Yersinia pestis PY-90]
gi|420794014|ref|ZP_15264511.1| DNA gyrase, A subunit [Yersinia pestis PY-91]
gi|420799133|ref|ZP_15269114.1| DNA gyrase, A subunit [Yersinia pestis PY-92]
gi|420804483|ref|ZP_15273928.1| DNA gyrase, A subunit [Yersinia pestis PY-93]
gi|420809725|ref|ZP_15278676.1| DNA gyrase, A subunit [Yersinia pestis PY-94]
gi|420815423|ref|ZP_15283783.1| DNA gyrase, A subunit [Yersinia pestis PY-95]
gi|420820615|ref|ZP_15288482.1| DNA gyrase, A subunit [Yersinia pestis PY-96]
gi|420825707|ref|ZP_15293035.1| DNA gyrase, A subunit [Yersinia pestis PY-98]
gi|420831476|ref|ZP_15298253.1| DNA gyrase, A subunit [Yersinia pestis PY-99]
gi|420836329|ref|ZP_15302625.1| DNA gyrase, A subunit [Yersinia pestis PY-100]
gi|420841473|ref|ZP_15307285.1| DNA gyrase, A subunit [Yersinia pestis PY-101]
gi|420847091|ref|ZP_15312357.1| DNA gyrase, A subunit [Yersinia pestis PY-102]
gi|420852520|ref|ZP_15317134.1| DNA gyrase, A subunit [Yersinia pestis PY-103]
gi|420858033|ref|ZP_15321824.1| DNA gyrase, A subunit [Yersinia pestis PY-113]
gi|421762672|ref|ZP_16199469.1| DNA gyrase subunit A [Yersinia pestis INS]
gi|21959880|gb|AAM86523.1|AE013898_6 DNA gyrase, subunit A, type II topoisomerase [Yersinia pestis
KIM10+]
gi|45435618|gb|AAS61176.1| DNA gyrase subunit A [Yersinia pestis biovar Microtus str. 91001]
gi|108776569|gb|ABG19088.1| DNA gyrase subunit A [Yersinia pestis Nepal516]
gi|108778840|gb|ABG12898.1| DNA gyrase subunit A [Yersinia pestis Antiqua]
gi|115346986|emb|CAL19877.1| DNA gyrase subunit A [Yersinia pestis CO92]
gi|145211442|gb|ABP40849.1| DNA gyrase subunit A [Yersinia pestis Pestoides F]
gi|149291167|gb|EDM41242.1| DNA gyrase subunit A [Yersinia pestis CA88-4125]
gi|165913694|gb|EDR32313.1| DNA gyrase, A subunit [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923627|gb|EDR40759.1| DNA gyrase, A subunit [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991243|gb|EDR43544.1| DNA gyrase, A subunit [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207316|gb|EDR51796.1| DNA gyrase, A subunit [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962454|gb|EDR58475.1| DNA gyrase, A subunit [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050245|gb|EDR61653.1| DNA gyrase, A subunit [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057130|gb|EDR66893.1| DNA gyrase, A subunit [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229679121|gb|EEO75224.1| DNA gyrase subunit A [Yersinia pestis Nepal516]
gi|229689612|gb|EEO81673.1| DNA gyrase subunit A [Yersinia pestis biovar Orientalis str. India
195]
gi|229697526|gb|EEO87573.1| DNA gyrase subunit A [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229704004|gb|EEO91017.1| DNA gyrase subunit A [Yersinia pestis Pestoides A]
gi|262361269|gb|ACY57990.1| DNA gyrase subunit A [Yersinia pestis D106004]
gi|262365194|gb|ACY61751.1| DNA gyrase subunit A [Yersinia pestis D182038]
gi|270335665|gb|EFA46442.1| DNA gyrase, A subunit [Yersinia pestis KIM D27]
gi|294353689|gb|ADE64030.1| DNA gyrase subunit A [Yersinia pestis Z176003]
gi|320015942|gb|ADV99513.1| DNA gyrase subunit A [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342856053|gb|AEL74606.1| DNA gyrase subunit A [Yersinia pestis A1122]
gi|391429495|gb|EIQ91341.1| DNA gyrase, A subunit [Yersinia pestis PY-01]
gi|391430716|gb|EIQ92392.1| DNA gyrase, A subunit [Yersinia pestis PY-02]
gi|391432623|gb|EIQ94045.1| DNA gyrase, A subunit [Yersinia pestis PY-03]
gi|391445452|gb|EIR05574.1| DNA gyrase, A subunit [Yersinia pestis PY-04]
gi|391446382|gb|EIR06430.1| DNA gyrase, A subunit [Yersinia pestis PY-05]
gi|391450303|gb|EIR09952.1| DNA gyrase, A subunit [Yersinia pestis PY-06]
gi|391462007|gb|EIR20574.1| DNA gyrase, A subunit [Yersinia pestis PY-07]
gi|391463071|gb|EIR21510.1| DNA gyrase, A subunit [Yersinia pestis PY-08]
gi|391465056|gb|EIR23281.1| DNA gyrase, A subunit [Yersinia pestis PY-09]
gi|391478541|gb|EIR35448.1| DNA gyrase, A subunit [Yersinia pestis PY-10]
gi|391479711|gb|EIR36465.1| DNA gyrase, A subunit [Yersinia pestis PY-11]
gi|391479781|gb|EIR36528.1| DNA gyrase, A subunit [Yersinia pestis PY-12]
gi|391493852|gb|EIR49154.1| DNA gyrase, A subunit [Yersinia pestis PY-13]
gi|391495004|gb|EIR50161.1| DNA gyrase, A subunit [Yersinia pestis PY-15]
gi|391497703|gb|EIR52536.1| DNA gyrase, A subunit [Yersinia pestis PY-14]
gi|391509618|gb|EIR63222.1| DNA gyrase, A subunit [Yersinia pestis PY-16]
gi|391510539|gb|EIR64060.1| DNA gyrase, A subunit [Yersinia pestis PY-19]
gi|391514805|gb|EIR67883.1| DNA gyrase, A subunit [Yersinia pestis PY-25]
gi|391525290|gb|EIR77448.1| DNA gyrase, A subunit [Yersinia pestis PY-29]
gi|391528064|gb|EIR79919.1| DNA gyrase, A subunit [Yersinia pestis PY-34]
gi|391529094|gb|EIR80836.1| DNA gyrase, A subunit [Yersinia pestis PY-32]
gi|391541601|gb|EIR92130.1| DNA gyrase, A subunit [Yersinia pestis PY-36]
gi|391543569|gb|EIR93886.1| DNA gyrase, A subunit [Yersinia pestis PY-42]
gi|391544583|gb|EIR94778.1| DNA gyrase, A subunit [Yersinia pestis PY-45]
gi|391558592|gb|EIS07459.1| DNA gyrase, A subunit [Yersinia pestis PY-46]
gi|391559295|gb|EIS08086.1| DNA gyrase, A subunit [Yersinia pestis PY-47]
gi|391560438|gb|EIS09061.1| DNA gyrase, A subunit [Yersinia pestis PY-48]
gi|391573820|gb|EIS20804.1| DNA gyrase, A subunit [Yersinia pestis PY-52]
gi|391574579|gb|EIS21446.1| DNA gyrase, A subunit [Yersinia pestis PY-53]
gi|391586121|gb|EIS31454.1| DNA gyrase, A subunit [Yersinia pestis PY-55]
gi|391586402|gb|EIS31704.1| DNA gyrase, A subunit [Yersinia pestis PY-54]
gi|391589826|gb|EIS34666.1| DNA gyrase, A subunit [Yersinia pestis PY-56]
gi|391603145|gb|EIS46361.1| DNA gyrase, A subunit [Yersinia pestis PY-60]
gi|391603450|gb|EIS46636.1| DNA gyrase, A subunit [Yersinia pestis PY-58]
gi|391604729|gb|EIS47701.1| DNA gyrase, A subunit [Yersinia pestis PY-59]
gi|391617539|gb|EIS59077.1| DNA gyrase, A subunit [Yersinia pestis PY-61]
gi|391618263|gb|EIS59717.1| DNA gyrase, A subunit [Yersinia pestis PY-63]
gi|391624833|gb|EIS65414.1| DNA gyrase, A subunit [Yersinia pestis PY-64]
gi|391629304|gb|EIS69256.1| DNA gyrase, A subunit [Yersinia pestis PY-65]
gi|391640624|gb|EIS79150.1| DNA gyrase, A subunit [Yersinia pestis PY-71]
gi|391642829|gb|EIS81062.1| DNA gyrase, A subunit [Yersinia pestis PY-66]
gi|391643082|gb|EIS81284.1| DNA gyrase, A subunit [Yersinia pestis PY-72]
gi|391652777|gb|EIS89807.1| DNA gyrase, A subunit [Yersinia pestis PY-76]
gi|391658412|gb|EIS94816.1| DNA gyrase, A subunit [Yersinia pestis PY-88]
gi|391663411|gb|EIS99252.1| DNA gyrase, A subunit [Yersinia pestis PY-89]
gi|391665600|gb|EIT01171.1| DNA gyrase, A subunit [Yersinia pestis PY-90]
gi|391671869|gb|EIT06766.1| DNA gyrase, A subunit [Yersinia pestis PY-91]
gi|391683726|gb|EIT17476.1| DNA gyrase, A subunit [Yersinia pestis PY-93]
gi|391685085|gb|EIT18659.1| DNA gyrase, A subunit [Yersinia pestis PY-92]
gi|391686051|gb|EIT19518.1| DNA gyrase, A subunit [Yersinia pestis PY-94]
gi|391697711|gb|EIT30079.1| DNA gyrase, A subunit [Yersinia pestis PY-95]
gi|391701443|gb|EIT33449.1| DNA gyrase, A subunit [Yersinia pestis PY-96]
gi|391702492|gb|EIT34375.1| DNA gyrase, A subunit [Yersinia pestis PY-98]
gi|391711967|gb|EIT42890.1| DNA gyrase, A subunit [Yersinia pestis PY-99]
gi|391718358|gb|EIT48610.1| DNA gyrase, A subunit [Yersinia pestis PY-100]
gi|391718753|gb|EIT48969.1| DNA gyrase, A subunit [Yersinia pestis PY-101]
gi|391729494|gb|EIT58487.1| DNA gyrase, A subunit [Yersinia pestis PY-102]
gi|391732633|gb|EIT61176.1| DNA gyrase, A subunit [Yersinia pestis PY-103]
gi|391736282|gb|EIT64324.1| DNA gyrase, A subunit [Yersinia pestis PY-113]
gi|411176878|gb|EKS46893.1| DNA gyrase subunit A [Yersinia pestis INS]
Length = 891
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/851 (55%), Positives = 628/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR STP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRASTPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N R++E+I +EL IK +Y ++RR+EI N + + EDLI
Sbjct: 480 ELLTLIGELIFILENPDRLMEVIREELVAIKEQY----NDLRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGCHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPEGQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|162421768|ref|YP_001605843.1| DNA gyrase subunit A [Yersinia pestis Angola]
gi|162354583|gb|ABX88531.1| DNA gyrase, A subunit [Yersinia pestis Angola]
Length = 885
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/851 (55%), Positives = 628/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR STP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRASTPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N R++E+I +EL IK +Y ++RR+EI N + + EDLI
Sbjct: 480 ELLTLIGELIFILENPDRLMEVIREELVAIKEQY----NDLRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGCHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPEGQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|354724458|ref|ZP_09038673.1| DNA gyrase subunit A [Enterobacter mori LMG 25706]
Length = 878
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/876 (53%), Positives = 645/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLARELTPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + E SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIDDEEISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAALVARPWALGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E +EL ++++++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEATREELELVRDQFG----DARRTEITANSSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 REDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIVPRGEG-AILTVTQNGYGKRTAESEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGTVAEGDDEIA 863
>gi|417366578|ref|ZP_12138807.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353591541|gb|EHC49791.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 841
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/850 (54%), Positives = 635/850 (74%), Gaps = 10/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLC 850
+ G+QR+
Sbjct: 831 ENVVGLQRVA 840
>gi|256822117|ref|YP_003146080.1| DNA gyrase subunit A [Kangiella koreensis DSM 16069]
gi|256795656|gb|ACV26312.1| DNA gyrase, A subunit [Kangiella koreensis DSM 16069]
Length = 879
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/849 (54%), Positives = 638/849 (75%), Gaps = 10/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N +N
Sbjct: 1 MGELAKEILPINIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF NYDG E EP+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMDKLAHQLLADLEKETVDFEDNYDGSESEPTVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++ NP+ +I +L++ I PDFPTA II G + + D Y+TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLALIDNPDITIPELMEYIKGPDFPTAAIINGRAGIIDAYHTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+++H+E + + +I++ ELPYQVNK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 YLRSRSHVETDEKSGKQSIVVTELPYQVNKARLIEKIAELVKDKKIEGITGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL++ E+PE+VLN LY Q+Q+QN FG+NM+AL N QP+L NLK+ + F+ HR+E
Sbjct: 301 MRMVIELRKGEVPEVVLNNLYAQSQMQNVFGINMVALDNNQPRLFNLKDAIDAFVTHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AH+LEGL IAL NID I++I+ + TP+EAK ++ W V
Sbjct: 361 VVTRRTIFELRKAREKAHVLEGLAIALANIDAIIELIKESPTPKEAKEGLMGRGWEPGQV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ ++ + YKLSD QAQ IL + L +LT +E KI+ +Y+
Sbjct: 421 STMLARAGTEACRPEELAAEFGFHDG-FYKLSDAQAQAILDLRLHKLTGLEHDKILGEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + +L IL +++R++E+I +EL ++ +G RRSEI+ + ++ + DLI
Sbjct: 480 DLLGLIEELLRILMSTERLLEVIREELEEVRENFGDE----RRSEILDSKLDLTIADLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +SEY+AQ+RGGRGK A KDED+I +L +A+THD ILCFS+
Sbjct: 536 EEDVVVTLSHEGYVKYQALSEYKAQRRGGRGKSATKMKDEDFIEKLLVASTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+++P R SRGKPI+N+ L+N E+I ILP+ R+F ++ +VFM+T+
Sbjct: 596 TGKVYWLKVFELPNAGRGSRGKPIVNVLPLENGERINAILPI----REFSEDKFVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIA+ ++++D LIG TDGS IM+FSD+GK +RF+E +V
Sbjct: 652 NGTVKKTSLEQFSRPRSNGIIALTIADDDELIGVVETDGSNHIMMFSDAGKVIRFDEANV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV GM+L + KVI ++V+ + SVLTATENGYGKRT ++++ RG +G
Sbjct: 712 RGMGRTARGVRGMKLPEGAKVIQMIVA-EEDGSVLTATENGYGKRTAMEDHPLRGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI+ ++RNG VV+A V E+MLI+ GG LIRT V +IR MGR+TQGV LI +++
Sbjct: 771 VISIQMSERNGAVVSAVPVIDGDEVMLISKGGTLIRTGVDDIRIMGRNTQGVRLIKLDDG 830
Query: 841 SKLCGVQRL 849
L G+QR+
Sbjct: 831 ETLVGLQRI 839
>gi|397164747|ref|ZP_10488202.1| DNA gyrase, A subunit [Enterobacter radicincitans DSM 16656]
gi|396093895|gb|EJI91450.1| DNA gyrase, A subunit [Enterobacter radicincitans DSM 16656]
Length = 878
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/879 (53%), Positives = 645/879 (73%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+D++ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDYVDNYDGTERIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + S+ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISVEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVETDAKNGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAGLIAQPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SSMLERAGDDAARPEWLEPEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL +I+ ++G RR+EI N + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELELIREQFGDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G+ ++MLFS +GK VRF E +V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGNDEVMLFSAAGKVVRFKEGAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L +K V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAEKDSVVSLIVPRGEG-AILTVTQNGYGKRTAETEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + ++ + +IDG A G +A V
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDDIAPEV 866
>gi|258544709|ref|ZP_05704943.1| DNA gyrase, A subunit [Cardiobacterium hominis ATCC 15826]
gi|258520046|gb|EEV88905.1| DNA gyrase, A subunit [Cardiobacterium hominis ATCC 15826]
Length = 888
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/852 (54%), Positives = 618/852 (72%), Gaps = 14/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FAKEV+ + LE+EM SYLDYAMSVIVGRALPD RDGLKPVHRRVLF+MH+ N WN
Sbjct: 30 MSDFAKEVLPVRLEDEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLFSMHKQGNAWN 89
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ +VK A +VG+ MGKYHPHGD +IYD LVRMAQ FSLR LVDGQGNFGS+DGD AA
Sbjct: 90 KKYVKSATIVGDVMGKYHPHGDSAIYDTLVRMAQPFSLRYPLVDGQGNFGSLDGDPPAAY 149
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL D++KET+DF NYDG ++EP+VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 150 RYTEARMAKIAHSLLTDIEKETVDFAPNYDGSQQEPTVLPTRVPNLLVNGSSGIAVGMAT 209
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
N+PPHNL E +D L++L +P+ + L++ +P PDFPT +I G + + Y TG+GR+
Sbjct: 210 NVPPHNLGETLDACLHLLDHPDADTSALMRYLPGPDFPTGALINGAKGIREAYETGRGRI 269
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTHIE + + I++DELPYQVNK +LL KI++LVKEKK++ I+ LRDESDK G
Sbjct: 270 YIRAKTHIETDDSNGKQTIVVDELPYQVNKANLLGKIAELVKEKKIDGITALRDESDKDG 329
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E+ E++LN L++ TQLQ FG+NM+ALV GQP+LL+LKE L FI HR+E
Sbjct: 330 IRMVIELRRGEVAEVILNNLFQLTQLQIVFGINMMALVGGQPRLLSLKEALQVFIAHRRE 389
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR+I+ELRKARE AHILEGL IAL NID I++IR+++ P EAK ++ W
Sbjct: 390 VVTRRSIYELRKARERAHILEGLAIALANIDEIIELIRASAGPAEAKEALLARGWT---P 446
Query: 421 SKIIGFNKKNYNTISKINNISKL--QNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+++ + S+ + + K D Y LS QAQ IL + L RLT +EQ KII +
Sbjct: 447 GQVVDMLARAGAENSRPDGLGKQYGMRGDAYHLSPEQAQAILDLRLHRLTGLEQDKIIQE 506
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
++ +I ++ L +IL +R++ +I +EL IKN++ ++RR++I+ +N S EDL
Sbjct: 507 FQEIIHEIEALLEILQVPERLLAVIKEELLDIKNQF----NDVRRTQILDTHLNLSLEDL 562
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D VITLS+ GYIK+QP+++Y AQ+RGG+GK A KDED++ QL +ANTHD +LCF
Sbjct: 563 IAEEDRVITLSHEGYIKAQPLADYEAQRRGGKGKSATAVKDEDFVEQLIVANTHDTMLCF 622
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
+N G++YWLKV+++PQ RN++GKP++N+ + E++ +L RD+P++ Y+ +
Sbjct: 623 TNRGKVYWLKVYELPQAGRNAKGKPMVNLLPFEPGERLNAVL----TTRDYPEDQYLIFA 678
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS +S PR GIIA+NL +D L+ A TDGS DIMLFSD+GKAVRFNEN
Sbjct: 679 TKSGTVKKTPLSEYSRPRSIGIIAINLREDDELVDVARTDGSRDIMLFSDAGKAVRFNEN 738
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
SVR+MGR + GV GM L+ Q+VIAL V Q +LT TENGYGKRT + +Y + RGT
Sbjct: 739 SVRSMGRDSTGVRGMNLDDGQRVIALCVVEEQG-DILTITENGYGKRTPVADYPQKGRGT 797
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG+ISI + RNG+ V A V IML+T G L+RTRV+EI GR+TQGV LI
Sbjct: 798 KGVISIACSARNGQAVCAVQVLEDEHIMLVTDNGTLVRTRVAEISTSGRNTQGVRLIRTT 857
Query: 839 NKSKLCGVQRLC 850
+ KL V ++
Sbjct: 858 DSEKLIAVAKIV 869
>gi|146312441|ref|YP_001177515.1| DNA gyrase subunit A [Enterobacter sp. 638]
gi|145319317|gb|ABP61464.1| DNA gyrase subunit A [Enterobacter sp. 638]
Length = 888
Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/876 (52%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+K+T+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKDTVDFVDNYDGTERIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + E ++ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIDDEEITVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAGLVAQPWALGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL ++++++G + RR+EI N + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELVRDQFG----DARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 REDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIA+NL+ D LIG LT GS D+MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTGFSRPRSAGIIAINLNEGDELIGVDLTSGSDDVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G+RL + V++L++ + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIRLAGEDSVVSLIIPRGEG-AILTVTQNGYGKRTAEGEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSVAEGDDEIA 863
>gi|378766414|ref|YP_005194876.1| DNA gyrase subunit A [Pantoea ananatis LMG 5342]
gi|365185889|emb|CCF08839.1| DNA gyrase subunit A [Pantoea ananatis LMG 5342]
Length = 880
Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/871 (53%), Positives = 643/871 (73%), Gaps = 13/871 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+++LL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHDLLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLREVINGCLAYIEDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R III ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVEVDAKTGRETIIIHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMALKEILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPTPAEAKAGLIAQSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + ++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEAQFGIREGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL +S+R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 QLLDQIAELLHILGSSERLMEVIREELELMRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIA+NL ++D LIG ALT+G+ + MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTGLQEFSRPRSAGIIAINLRDDDELIGVALTNGNDEAMLFSAAGKVVRFAESAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + +V++L+V ++ ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTASGVRGIKLAQNDRVVSLIVP-REEGAILTVTQNGYGKRTANSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVIGAVQVVDSDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
+ G+QR+ + ++ + +IDG A G
Sbjct: 831 ENVVGLQRVAEPVEEEE---LDSIDGSVAEG 858
>gi|421493181|ref|ZP_15940538.1| GYRA [Morganella morganii subsp. morganii KT]
gi|455738996|ref|YP_007505262.1| DNA gyrase subunit A [Morganella morganii subsp. morganii KT]
gi|400192349|gb|EJO25488.1| GYRA [Morganella morganii subsp. morganii KT]
gi|455420559|gb|AGG30889.1| DNA gyrase subunit A [Morganella morganii subsp. morganii KT]
Length = 871
Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/853 (54%), Positives = 630/853 (73%), Gaps = 12/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MSDNAKEILPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMKELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL D+DKET+DF+ NYDG E P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADIDKETVDFVPNYDGTEMIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + + + SI L++ IP PDFPTA II G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGILDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II++E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 HIRARAEVETDEKTGRETIIVNEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL GQPK+LNLKEIL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYLLTQMQTTFGINMVALHQGQPKILNLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE AHILEGL IAL NID I++IR TP EAK ++ W L V
Sbjct: 361 VVTRRTIYELRKARERAHILEGLAIALANIDPIIELIRRAPTPAEAKAGLLAQAWELGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + ++ +++ +Y L+++QAQ IL + LQ+LT +E +K++++Y
Sbjct: 421 AAMLAGAGDDAARPEGLDEQFGIRDG-LYHLTEVQAQAILDLRLQKLTGLEHEKLLDEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + L IL + +R++E+I +EL +K ++ + RR++I N + + EDLI+
Sbjct: 480 ELLELIAGLLHILQSPERLMEVIREELVAVKEQF----NDKRRTDITENTADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFSN
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNK--EKITVILPLSNNKRDFPKNNYVFMS 658
G+LYWLKV+Q+P+ SR +RG+PIIN+ L + E+IT ILP+ R++ + +VFM+
Sbjct: 596 KGKLYWLKVYQLPEASRGARGRPIINILPLDQEQNERITAILPV----REYEEGKFVFMA 651
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E+
Sbjct: 652 TASGTVKKTSLQDFSRPRNAGIIAVNLNEGDELIGVDLTDGSNEVMLFSADGKVVRFAED 711
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
+VRAMGR+A GV G+RL V++L++ + + +LT TENGYGKRT EY +R T
Sbjct: 712 AVRAMGRTATGVRGIRLGDDDAVVSLIIPRGEGE-ILTVTENGYGKRTAEAEYPTKSRAT 770
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 QGVISIKVSERNGKVVGAIQVGADDQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTG 830
Query: 839 NKSKLCGVQRLCK 851
+ K+ G+QR+ +
Sbjct: 831 EEEKVVGLQRVAE 843
>gi|395230497|ref|ZP_10408801.1| DNA gyrase subunit A [Citrobacter sp. A1]
gi|421846042|ref|ZP_16279193.1| DNA gyrase subunit A [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|424731442|ref|ZP_18160026.1| dna gyrase subunit a [Citrobacter sp. L17]
gi|394715882|gb|EJF21667.1| DNA gyrase subunit A [Citrobacter sp. A1]
gi|411772811|gb|EKS56406.1| DNA gyrase subunit A [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|422894093|gb|EKU33908.1| dna gyrase subunit a [Citrobacter sp. L17]
gi|455644452|gb|EMF23552.1| DNA gyrase subunit A [Citrobacter freundii GTC 09479]
Length = 878
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEQIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ +W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALVARSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I+ ++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIREQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G+ ++MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGNDEVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIVPRGEG-AILTVTQNGYGKRTAESEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVEDTDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSAAEGDEDIA 863
>gi|436795654|ref|ZP_20522427.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434962274|gb|ELL55495.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
Length = 878
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 645/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYGTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|365850441|ref|ZP_09390904.1| DNA gyrase, A subunit [Yokenella regensburgei ATCC 43003]
gi|364567107|gb|EHM44779.1| DNA gyrase, A subunit [Yokenella regensburgei ATCC 43003]
Length = 879
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/876 (53%), Positives = 647/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + ++ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDENITVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK+LNLKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKILNLKEILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I +W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAGLIARSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELELVRDQFGDE----RRTEITANSSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 REDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G+ ++MLFS +GK VRF EN+V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGNDEVMLFSAAGKVVRFKENAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L+V + ++LT T+NGYGKRT EY +RGT+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDSVVSLIVPRGEG-AILTVTQNGYGKRTAETEYPTKSRGTQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGSAAEGDDDIA 863
>gi|90407750|ref|ZP_01215928.1| DNA gyrase, A subunit [Psychromonas sp. CNPT3]
gi|90311110|gb|EAS39217.1| DNA gyrase, A subunit [Psychromonas sp. CNPT3]
Length = 906
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/886 (53%), Positives = 645/886 (72%), Gaps = 41/886 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++FA +V I +E+E+ SYL+YAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSEFAPDVSPINIEDELKNSYLEYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLRNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+DF+ NYDG E P V+PT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKIAHELLADLDKETVDFVPNYDGTELIPEVMPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L +++NP+ +I+ LI+ IP PDFPTAGII G + DGY TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLALINNPDLTIDQLIEYIPGPDFPTAGIINGRKGIIDGYKTGRGKL 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R II+DELPYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 KIRAKARVEVNEKTGRETIIVDELPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIE+KR E+ E++LN LY QTQ+Q++FG+NM+AL +GQPKLLNLKE+L+ FILHR+E
Sbjct: 301 MRMVIEVKRGEVGEVILNNLYAQTQMQSSFGINMVALDHGQPKLLNLKEMLHAFILHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KAR AH+LEGL I+L NI+ I++IR +STP EAK + W L +V
Sbjct: 361 VVTRRTVFELKKARARAHLLEGLAISLANIEPIIELIRHSSTPAEAKTALQAQGWKLGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + ++ I +D+Y ++D QAQ IL M L +LT +E +KI+N
Sbjct: 421 AAMLEASGVDVARPDGLA----IEFGMRDDLYFMTDTQAQAILDMRLHKLTGLEHEKILN 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +I+ + L IL N R++E+IT+ELN ++ + + RR+EI + + ED
Sbjct: 477 EYKELIEIITALLFILENPHRLMEVITEELNDVRANFA----DARRTEITASETDLCMED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A KDED+I++L +A+THD ILC
Sbjct: 533 LITEEDVVVTLSHEGYVKYQPLTDYEAQRRGGKGKSATKMKDEDFIDKLLVASTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SR +RG+PIIN+ L+ E+IT ILP+ R + + +VFM
Sbjct: 593 FSTRGRLYWLKVFQLPLASRQARGRPIINILPLEQGERITAILPV----RTYDDDKFVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS +S PR SG+IA+NL++++ LIGA +T+G +IM+FSD+GK VRF E
Sbjct: 649 ATANGTVKKTALSAYSRPRASGLIAINLNDDNELIGALITNGENEIMIFSDAGKVVRFKE 708
Query: 718 -------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
VR MGR+A GV G++L++ +K ++L+V N
Sbjct: 709 AEETLVVDEQGNPVLDENGVQEIKFKGVRPMGRTATGVRGIKLKEGEKAVSLIVPNATGH 768
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LT TENGYGKRT + +Y +R T+G+ISIK ++RNGKVV A V+ EIMLI+ G
Sbjct: 769 -ILTCTENGYGKRTPLSDYASKSRATQGVISIKVSERNGKVVGAVQVDENDEIMLISNRG 827
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKY 858
L+RT V + +GR+TQGV LI + K+ +QR+ ++ + Y
Sbjct: 828 TLVRTPVHGVSIVGRNTQGVTLIRTRDDEKIVALQRIEEVHELPVY 873
>gi|123441724|ref|YP_001005708.1| DNA gyrase subunit A [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122088685|emb|CAL11487.1| DNA gyrase subunit A [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 885
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/851 (54%), Positives = 631/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYYTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + +I L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENITIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I S+W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIASSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGGDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK +Y ++RR+EI N + + EDLI
Sbjct: 480 ELLTVIAELIFILENPERLMEVIREELVAIKEQY----NDVRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDG+ ++MLFS GK VRF E+ V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGTNEVMLFSALGKVVRFPESQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|445335582|ref|ZP_21415477.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444874471|gb|ELX98717.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
Length = 878
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/876 (53%), Positives = 645/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYYTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 863
>gi|385331101|ref|YP_005885052.1| DNA gyrase subunit A-like protein [Marinobacter adhaerens HP15]
gi|311694251|gb|ADP97124.1| DNA gyrase subunit A-like protein [Marinobacter adhaerens HP15]
Length = 873
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/880 (52%), Positives = 648/880 (73%), Gaps = 14/880 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYPLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL DLDKET+DF+ NYDG E+ P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKIAHSLLADLDKETVDFVDNYDGTERIPEVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++ NP+ +I++L++ IP PDFPT GII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVVNGCLALIDNPDLTIDELMEFIPGPDFPTEGIINGRAGIVEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE N+ NR AIII ELPYQ+NK L+EKI++LVKEK+LE IS LRDES+K G
Sbjct: 241 YIRARHEIEHDNKTNRDAIIITELPYQLNKARLIEKIAELVKEKRLEGISELRDESNKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E P++V+N L+ QTQL+ FG+NM+ L+NG+PK LNLK++L F+ HR+E
Sbjct: 301 IRVVIELRRGENPDVVVNNLFAQTQLETVFGINMVGLINGEPKTLNLKQLLDAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE HILEGLT+AL NID I++I+++ + EAK K+I W+ DV
Sbjct: 361 VVTRRTIYELRKARERGHILEGLTVALANIDEIIELIKASPSAAEAKEKLIAKGWSPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ ++ + I L+ +Y LS QAQ IL + L RLT +E +K+ N+Y+
Sbjct: 421 MAMLERAGQDACRPDDLPEIYGLREG-LYHLSPEQAQAILDLRLHRLTGLETEKLQNEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ K+ DL DIL + +R++++I +EL I ++G RR+EI + + + DLI
Sbjct: 480 EILDKIADLLDILGDPERLLQVIREELEAIVTEFGDE----RRTEITSSRRDLTIADLID 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+T+S+ GY K+Q + +Y+AQ+RGGRGK A KDED++ +L +AN+HD ILCFSN
Sbjct: 536 EEDLVVTISHSGYAKTQAVEDYQAQRRGGRGKAATSMKDEDFVEKLLVANSHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWL+V++IP+ SR SRG+P++N+ L E+IT LP+ RD+P++ +V M+TS
Sbjct: 596 RGKVYWLRVFEIPRASRASRGRPMVNILPLDEGERITTFLPV----RDYPEDQFVLMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L NFS PR SG+IA++L D LIGAA+T G ++MLFS +GKAVRFNE +V
Sbjct: 652 AGVVKKTPLPNFSRPRSSGLIALSLDEGDTLIGAAITKGDAEVMLFSTAGKAVRFNEEAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R M R+ARGV G+++ + V++L++ + +LTA+ENGYGKRT I E+ ++RG++G
Sbjct: 712 RPMSRTARGVRGIKMPQGHHVVSLIIPQD-GGVILTASENGYGKRTAIDEFPTYSRGSQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV-EN 839
+I+++ ++RNG +V A + E+MLI+ G L+RTR E+ + R+TQGV LI + +
Sbjct: 771 VIAMQCSERNGNLVTALQLFDGDEMMLISDKGTLVRTRTDEVSVLSRNTQGVRLIKLSQE 830
Query: 840 KSKLCGVQRLCKI---TMIKKYIPVITIDGPTASGKGTVA 876
+L GV+R+ + + + P++ + P +G A
Sbjct: 831 DERLVGVERIAETDDEELDSEGNPIVADESPEEGQEGESA 870
>gi|289824701|ref|ZP_06544200.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
Length = 878
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/851 (54%), Positives = 635/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDFAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ L+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHGLMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|188533369|ref|YP_001907166.1| DNA gyrase subunit A [Erwinia tasmaniensis Et1/99]
gi|188028411|emb|CAO96272.1| DNA gyrase subunit A [Erwinia tasmaniensis Et1/99]
Length = 878
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/882 (53%), Positives = 647/882 (73%), Gaps = 19/882 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPEVMPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + ++ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIDDENITVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 YIRARGEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMPLKDILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRTIFELRKAR+ AHILE L +AL NID I++IR+ TP EAK +I W L +V
Sbjct: 361 VITRRTIFELRKARDRAHILEALAVALANIDPIIELIRAAPTPAEAKAGLISRPWALGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G N + + I Q Y L++ QAQ IL + LQ+LT +E +K+++
Sbjct: 421 SAMLERAGDNAARPEWLEEQYGIRDGQ----YHLTEQQAQAILDLRLQKLTGLEHEKLLD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y++++ ++ +L IL++S+R++E+I +EL +I++++G RR+EI N+ + + ED
Sbjct: 477 EYKDLLAQIAELLRILASSERLMEVIREELELIRDQFGDK----RRTEITANSADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILC
Sbjct: 533 LINQEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM
Sbjct: 593 FSSRGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYAEGWNIFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L+ FS PR +GIIAVNL ++D LIG +LTDGS + MLFS +GK VRF E
Sbjct: 649 ATASGTVKKTALTEFSRPRSAGIIAVNLRDDDELIGVSLTDGSDEAMLFSAAGKVVRFAE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
++VRAMGR+A GV G++L + +V++L+V + +++T T+NGYGKRT EY +R
Sbjct: 709 SAVRAMGRTASGVRGIKLAEGDRVVSLIVPRDDG-AIMTVTQNGYGKRTANAEYPTKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 768 TQGVISIKVTERNGPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRT 827
Query: 838 ENKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + ++ + IDG A G +A V
Sbjct: 828 AEDENVVGLQRVAEPVAEEE---LDAIDGSLAEGDEDIAPEV 866
>gi|308187583|ref|YP_003931714.1| DNA gyrase subunit A [Pantoea vagans C9-1]
gi|308058093|gb|ADO10265.1| DNA gyrase subunit A [Pantoea vagans C9-1]
Length = 890
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLGYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+++LL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHDLLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLREVINGCLAYIEDENISIEALMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R III ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVEADAKTGRETIIIHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMALKEILDAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR P EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPNPAEAKAGLIAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + ++ +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLDPQYGIRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L ILS+++R++E+I +EL ++++++G RR+EI N + + EDLI
Sbjct: 480 ALLEQIAELLHILSSAERLMEVIREELELMRDQFGDD----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
LG VKKT L FS PR +GIIAVNL ++D LIG ALT+G+ + MLFS +GK VRF E++V
Sbjct: 652 LGTVKKTALKEFSRPRSAGIIAVNLRDDDELIGVALTNGNDEAMLFSAAGKVVRFAESAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G+RL + +V++L+V ++ +++T T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTASGVRGIRLAEGDRVVSLIVP-REEGAIMTVTQNGYGKRTANSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G+ +A
Sbjct: 831 ENVVGLQRVAEPVEEEE---LDSIDGSVAEGEDDIA 863
>gi|16761200|ref|NP_456817.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|213646449|ref|ZP_03376502.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|25292862|pir||AF0790 DNA topoisomerase (ATP-hydrolysing) (EC 5.99.1.3) - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16503499|emb|CAD07504.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhi]
Length = 878
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/851 (54%), Positives = 635/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ L+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHGLMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|261822454|ref|YP_003260560.1| DNA gyrase subunit A [Pectobacterium wasabiae WPP163]
gi|261606467|gb|ACX88953.1| DNA gyrase, A subunit [Pectobacterium wasabiae WPP163]
gi|385872763|gb|AFI91283.1| DNA gyrase subunit A [Pectobacterium sp. SCC3193]
Length = 879
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/866 (53%), Positives = 639/866 (73%), Gaps = 10/866 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + + + ++ L++ I PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCLAYIDDEDITLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARGEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR ++P EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT ME +K++++Y+
Sbjct: 421 STMLERAGDDAARPEWLEPEFGIRDGHYY-LTEQQAQAILDLRLQKLTGMEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ ++ +L IL++ +R++E+I +EL IK +Y RR+EI N + + EDLI
Sbjct: 480 DLLAEIAELLYILNSPERLMEVIREELEAIKTQYSDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS + MLFS GK VRF+E +V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L+ + +V++L++ + +LT T+NG+GKRT + EY +R TKG
Sbjct: 712 RSMGRTATGVRGINLQGEDRVVSLIIPRGEG-DILTVTQNGFGKRTAVSEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDG 866
+ G+QR+ + ++ V++++G
Sbjct: 831 EHVVGLQRVAEPVEDEELDGVVSVEG 856
>gi|387888622|ref|YP_006318920.1| DNA gyrase [Escherichia blattae DSM 4481]
gi|414592689|ref|ZP_11442338.1| DNA gyrase subunit A [Escherichia blattae NBRC 105725]
gi|386923455|gb|AFJ46409.1| DNA gyrase [Escherichia blattae DSM 4481]
gi|403196170|dbj|GAB79990.1| DNA gyrase subunit A [Escherichia blattae NBRC 105725]
Length = 878
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/879 (52%), Positives = 649/879 (73%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEVINGCLAYIDDESISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQ+Q +FG+NM+AL +GQPK+LNLKEI+ F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQMQVSFGINMVALYHGQPKILNLKEIIEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR+ TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRNAPTPAEAKAGLVARPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLESAGDDAARPEWLEPQYGIRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL +++R++E+I +EL +I++++G ++RR+EI N+ + + EDLI
Sbjct: 480 ELLLQIAELLHILGSAERLMEVIREELVLIRDQFG----DVRRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTCGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L V++L++ + S+LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLADGDSVVSLIIPRGEG-SILTVTQNGYGKRTAAQEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGNVVGAVQVDDADQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + ++ + +IDG A G+ +A V
Sbjct: 831 EHVVGLQRVAEPVDDEE---LDSIDGSVAEGEEDIAPEV 866
>gi|238753719|ref|ZP_04615080.1| DNA gyrase subunit A [Yersinia ruckeri ATCC 29473]
gi|238707955|gb|EEQ00312.1| DNA gyrase subunit A [Yersinia ruckeri ATCC 29473]
gi|374683173|gb|AEZ63372.1| GyrA [Yersinia ruckeri]
Length = 889
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/851 (54%), Positives = 629/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + + +I L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDEDITIEGLMEHIPGPDFPTGAIINGRRGIDEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YVRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIANPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEPEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTLIGELIFILENPERLMEVIREELVAIKEQY----NDARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSTDGKVVRFPEGQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|335042503|ref|ZP_08535530.1| type IIA topoisomerase , A subunit [Methylophaga aminisulfidivorans
MP]
gi|333789117|gb|EGL54999.1| type IIA topoisomerase , A subunit [Methylophaga aminisulfidivorans
MP]
Length = 863
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/851 (54%), Positives = 628/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A E+ SI +E EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSEIALELDSIGIETEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNSWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD AAM
Sbjct: 61 SPYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQPFSMRYMLVDGQGNFGSVDGDPPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DL+KET+DF+ NYD E EP+VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHEMLADLEKETVDFVPNYDESESEPAVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++ + ++ NP+ + ++L++ +P PDFPT+GII G + + Y TG+GRV
Sbjct: 181 NIPPHNLTEILNACIAIIDNPDVTTHELMEYVPGPDFPTSGIINGARGIAEAYQTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + +I++ ELPYQVNK LLEKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 HIRARADIETNEATGQQSIVVKELPYQVNKARLLEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VI LKR E+PE+VLN LY+QTQ+Q FG+NM+A+V+GQP+ LNLKEIL FI HR+E
Sbjct: 301 MRMVIVLKRGEVPEVVLNNLYQQTQMQTVFGINMVAIVDGQPRTLNLKEILDAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR+I++LRKARE AH+LEGL AL NID I++I+++ P EAK ++ W +
Sbjct: 361 VVTRRSIYDLRKARERAHVLEGLATALANIDEVIELIKASPNPAEAKEALVSKGWASGMI 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++G + + + L +N +Y LS +QAQ IL M L RLT +EQ KI+ +Y
Sbjct: 421 LEMLGAAGAAASRPEDLADEFGLVDN-LYYLSPVQAQAILDMRLHRLTGLEQDKILQEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
V+ + +L ILS+ ++ +I +EL I +YG RR+EI+ N ++ + EDLI
Sbjct: 480 EVLDVIAELLAILSDPDNLMAVIREELVAINAEYGDE----RRTEILANHLDLTLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
++MV+TLS+ GY K+Q + Y+AQKRGG+GK A KDED+I LFIANTHD +LCFS+
Sbjct: 536 EEEMVVTLSHAGYAKTQQLDTYQAQKRGGKGKAATAMKDEDFIEHLFIANTHDTLLCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YW KV+++PQGSR SRGKPIIN+ L+ EKI +LP+ R+F + ++FM+T+
Sbjct: 596 AGKVYWKKVYELPQGSRASRGKPIINLLPLEEGEKINAVLPI----REFEADKFIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L ++S PR +GIIAV+L D LI A+TDG D+MLFS++GK +RF E V
Sbjct: 652 SGTVKKTPLVDYSRPRANGIIAVDLKEGDQLIDVAVTDGHSDVMLFSNTGKVIRFAETDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR +RGV GMR+ + +K+I+L+++ ++ ++LTATE GYGKRT + EY RG +G
Sbjct: 712 RSMGRVSRGVRGMRIAEDEKIISLIIA-EEEGAILTATEFGYGKRTNLAEYRVQGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
IISI+T+ RNG VV A V ++IMLIT GG L+RT V ++ +GR+TQGV LI + N
Sbjct: 771 IISIQTSARNGNVVGAVQVCDENQIMLITNGGTLVRTPVKDVSLVGRNTQGVRLINLSNG 830
Query: 841 SKLCGVQRLCK 851
KL G++R+ +
Sbjct: 831 EKLVGLERVIE 841
>gi|392308623|ref|ZP_10271157.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
citrea NCIMB 1889]
Length = 897
Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/874 (54%), Positives = 634/874 (72%), Gaps = 33/874 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DL+KET+D++ NYDG E+ P VLPT++P+LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKISHELLADLEKETVDYVPNYDGTEQIPDVLPTKVPSLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++ NP+ +I +LI IP PDFPTA II G + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLALIQNPDLTIEELIDYIPGPDFPTAAIINGKKGIEQAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + N+ II+ ELPYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEVEVDEKTNKETIIVHELPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E++LN LY QTQLQ FGMNM+AL N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEVKRGEVGEVILNNLYSQTQLQTVFGMNMVALDNNQPKCFNLKEMLDAFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH LEGL IAL NID I++IR + +P EAK ++ W L V
Sbjct: 361 VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPSPSEAKQALVARPWELGTV 420
Query: 421 SKIIGFNKKNYNTISKINNI-SKLQNND-MYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ K + +++ + + ++L D Y LS+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 KSML--EKAGEDNVARPDWLEAELGIRDGQYYLSEQQAQAILDLRLHKLTGLEHEKILAE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +++ + +L ILS+ +R++E+I DEL IK YG RR+EI A + S EDL
Sbjct: 479 YQELLEVIAELLFILSSPERLMEVIRDELVEIKETYGDE----RRTEISAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 INEEDVVVTLSHEGYVKYQPLSDYEAQRRGGKGKAATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GR+YWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ YV M+
Sbjct: 595 STAGRMYWLKVYQLPLASRTARGKPIVNLLPLEADERITTILPV----REYEEDKYVLMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L+ +S R SGIIA+NL+ D LIGA +TDGS DIMLF+D GK VRFNE
Sbjct: 651 TANGTVKKTPLTAYSRQRASGIIAINLNEGDNLIGADITDGSNDIMLFTDHGKVVRFNEK 710
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+++ KV++L+V N ++LT T
Sbjct: 711 LRDSDTGEVKIDPETGEEMLALRPMGRTATGVRGIKMPDDVKVVSLIVPKNDG-AILTVT 769
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT ++EY +R T+G++SIK + RNG VV A V +EIMLI+ G L+RTR
Sbjct: 770 ENGYGKRTPLEEYPAKSRATQGVVSIKVSDRNGSVVGAVQVEDNNEIMLISNRGTLVRTR 829
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
VSE+ +GR+TQGVILI ++ G+QR+ +I
Sbjct: 830 VSEVSTVGRNTQGVILIRTIEDEQVVGLQRIEEI 863
>gi|238788613|ref|ZP_04632405.1| DNA gyrase subunit A [Yersinia frederiksenii ATCC 33641]
gi|238723208|gb|EEQ14856.1| DNA gyrase subunit A [Yersinia frederiksenii ATCC 33641]
Length = 884
Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/851 (54%), Positives = 629/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIANPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTIIGELIFILENPERLMEVIREELVAIKEQY----NDARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPETQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVTPTDQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|440286851|ref|YP_007339616.1| DNA gyrase, A subunit [Enterobacteriaceae bacterium strain FGI 57]
gi|440046373|gb|AGB77431.1| DNA gyrase, A subunit [Enterobacteriaceae bacterium strain FGI 57]
Length = 878
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/876 (52%), Positives = 646/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+D++ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDYVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + +I L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDITIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVETDAKSGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAGLVAQPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +++ ++G + RR+EI N + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELVREQFGDN----RRTEITANTADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + KV++L++ + ++LT T+NGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDKVVSLIIPRGEG-AILTVTQNGYGKRTAAEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDDEIA 863
>gi|374683171|gb|AEZ63371.1| GyrA [Yersinia ruckeri]
Length = 889
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/851 (54%), Positives = 629/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDRAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + + +I L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDEDITIEGLMEHIPGPDFPTGAIINGRRGIDEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YVRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIANPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEPEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTLIGELIFILENPERLMEVIREELVAIKEQY----NDARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSTDGKVVRFPEGQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|358449192|ref|ZP_09159682.1| DNA gyrase subunit A [Marinobacter manganoxydans MnI7-9]
gi|357226609|gb|EHJ05084.1| DNA gyrase subunit A [Marinobacter manganoxydans MnI7-9]
Length = 876
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/852 (53%), Positives = 637/852 (74%), Gaps = 11/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYPLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL DLDKET+DF+ NYDG E+ P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKIAHSLLADLDKETVDFVDNYDGTERIPEVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ NP+ +I++L++ IP PDFPT GII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVVSGCLALIDNPDLTIDELMEFIPGPDFPTEGIINGRAGIVEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE N+ NR AIII ELPYQ+NK L+EKI++LVKEK+LE IS LRDES+K G
Sbjct: 241 YIRARHEIEHDNKTNRDAIIITELPYQLNKARLIEKIAELVKEKRLEGISELRDESNKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E P++V+N L+ QTQL+ FG+NM+ L+NG+PK LNLK++L F+ HR+E
Sbjct: 301 IRVVIELRRGENPDVVVNNLFAQTQLETVFGINMVGLINGEPKTLNLKQLLDAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE HILEGLT+AL NID I++I+++ + EAK K+I W+ DV
Sbjct: 361 VVTRRTIYELRKARERGHILEGLTVALANIDEIIELIKASPSAAEAKEKLIAKGWSPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ ++ + I L+ +Y LS QAQ IL + L RLT +E +K+ N+Y+
Sbjct: 421 MAMLERAGQDACRPDDLPEIYGLREG-LYHLSPEQAQAILDLRLHRLTGLETEKLQNEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ K+ DL DIL + +R++++I +EL I ++G RR+EI + + + DLI
Sbjct: 480 EILDKIADLLDILGDPERLLQVIREELEAIVTEFGDE----RRTEITSSRRDLTIADLID 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+T+S+ GY K+Q + +Y+AQ+RGGRGK A KDED++ +L +AN+HD ILCFSN
Sbjct: 536 EEDLVVTISHSGYAKTQAVEDYQAQRRGGRGKAATSMKDEDFVEKLLVANSHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWL+V++IP+ SR SRG+P++N+ L E+IT LP+ RD+P++ +V M+TS
Sbjct: 596 RGKVYWLRVFEIPRASRASRGRPMVNILPLDEGERITTFLPV----RDYPEDQFVLMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L NFS PR SG+IA++L D LIGAA+T G ++MLFS +GKAVRFNE +V
Sbjct: 652 AGVVKKTPLPNFSRPRSSGLIALSLDEGDTLIGAAITKGDAEVMLFSTAGKAVRFNEEAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R M R+ARGV G+++ + V++L++ + +LTA+ENGYGKRT I E+ ++RG++G
Sbjct: 712 RPMSRTARGVRGIKMPQGHHVVSLIIPQD-GGVILTASENGYGKRTAIDEFPTYSRGSQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV-EN 839
+I+++ ++RNG +V A + E+MLI+ G L+RTR E+ + R+TQGV LI + +
Sbjct: 771 VIAMQCSERNGNLVTALQLFDGDEMMLISDKGTLVRTRTDEVSVLSRNTQGVRLIKLSQE 830
Query: 840 KSKLCGVQRLCK 851
+L GV+R+ +
Sbjct: 831 DERLVGVERIAE 842
>gi|291618165|ref|YP_003520907.1| GyrA [Pantoea ananatis LMG 20103]
gi|386016491|ref|YP_005934778.1| DNA gyrase subunit A GyrA [Pantoea ananatis AJ13355]
gi|386078635|ref|YP_005992160.1| DNA gyrase subunit A GyrA [Pantoea ananatis PA13]
gi|291153195|gb|ADD77779.1| GyrA [Pantoea ananatis LMG 20103]
gi|327394560|dbj|BAK11982.1| DNA gyrase subunit A GyrA [Pantoea ananatis AJ13355]
gi|354987816|gb|AER31940.1| DNA gyrase subunit A GyrA [Pantoea ananatis PA13]
Length = 880
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/871 (53%), Positives = 643/871 (73%), Gaps = 13/871 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+++LL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHDLLADLEKETVDFVPNYDGTEQIPDVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLREVINGCLAYIEDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R III ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVEVDAKTGRETIIIHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMALKEILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPTPAEAKAGLIAQSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + ++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEAQFGIREGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL +S+R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 QLLDQIAELLHILGSSERLMEVIREELELMRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIA+NL ++D LIG ALT+G+ + MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTGLQEFSRPRSAGIIAINLRDDDELIGVALTNGNDEAMLFSAAGKVVRFAESAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + +V++L+V ++ ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTASGVRGIKLAQNDRVVSLIVP-REEGAILTVTQNGYGKRTANSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVIGAVQVVDSDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
+ G+QR+ + ++ + +IDG A G
Sbjct: 831 ENVVGLQRVAEPVEEEE---LDSIDGSVAEG 858
>gi|378979865|ref|YP_005228006.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|419972754|ref|ZP_14488181.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419977567|ref|ZP_14492866.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419983317|ref|ZP_14498468.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419989434|ref|ZP_14504410.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995473|ref|ZP_14510279.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420001615|ref|ZP_14516270.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420006481|ref|ZP_14520978.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420012301|ref|ZP_14526615.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420018082|ref|ZP_14532280.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420023830|ref|ZP_14537845.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420031871|ref|ZP_14545690.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420037045|ref|ZP_14550702.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420040993|ref|ZP_14554491.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420046754|ref|ZP_14560073.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420052464|ref|ZP_14565645.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420060346|ref|ZP_14573346.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420063924|ref|ZP_14576735.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420069856|ref|ZP_14582510.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420075400|ref|ZP_14587876.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420081161|ref|ZP_14593471.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909548|ref|ZP_16339358.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421916883|ref|ZP_16346447.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424932507|ref|ZP_18350879.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|428150293|ref|ZP_18998075.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428941010|ref|ZP_19014073.1| DNA gyrase subunit A [Klebsiella pneumoniae VA360]
gi|364519276|gb|AEW62404.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397350151|gb|EJJ43241.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397353908|gb|EJJ46975.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397355488|gb|EJJ48487.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397367240|gb|EJJ59852.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397369557|gb|EJJ62157.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397371939|gb|EJJ64447.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397382190|gb|EJJ74353.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397386144|gb|EJJ78230.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397390797|gb|EJJ82695.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397399374|gb|EJJ91028.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397400066|gb|EJJ91712.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397406061|gb|EJJ97499.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397418527|gb|EJK09685.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397419311|gb|EJK10460.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397425366|gb|EJK16245.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397433638|gb|EJK24282.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397434483|gb|EJK25118.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397442450|gb|EJK32801.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397448493|gb|EJK38667.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397453466|gb|EJK43526.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|407806694|gb|EKF77945.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|410116450|emb|CCM81983.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410120600|emb|CCM89072.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426301209|gb|EKV63458.1| DNA gyrase subunit A [Klebsiella pneumoniae VA360]
gi|427539737|emb|CCM94213.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
Length = 877
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/876 (52%), Positives = 643/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAENDSVVSLIIPRGEG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDDDIA 863
>gi|238920518|ref|YP_002934033.1| DNA gyrase, A subunit, putative [Edwardsiella ictaluri 93-146]
gi|238870087|gb|ACR69798.1| DNA gyrase, A subunit, putative [Edwardsiella ictaluri 93-146]
Length = 878
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/871 (53%), Positives = 640/871 (73%), Gaps = 13/871 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P VLPT++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + +I L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDENITIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE ++ +R I++ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YVRARAEIEVDDKNSRETIVVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQ+Q +FG+NM+AL GQPKLL LKE L F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQMQVSFGINMVALHQGQPKLLTLKECLEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AHILEGL IAL NID I++IR TP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARGRAHILEGLAIALVNIDPIIELIRRAPTPAEAKAALVSQAWALGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLARAGDDAARPEWLEPQYGIRDG-HYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ L IL + +R++E+I +EL I+ ++G + RR+EI N + + EDLI
Sbjct: 480 ALLEQIAALIFILQSPERLMEVIREELIAIREQFG----DARRTEITANTADINIEDLIE 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YW+KV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRMYWMKVYQLPEASRGARGRPIINLLPLEADERITAILPV----REYAEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LTDG+ ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALAEFSRPRAAGIIAVNLNDGDELIGVDLTDGNDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L +V++L+V + + ++LT T+NGYGKR+ + EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDRVVSLIVPHGEG-AILTVTQNGYGKRSSVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVEDSDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
+ G+QR+ + + + +IDG A G
Sbjct: 831 EHVVGLQRVVEPVDDED---LDSIDGSAAEG 858
>gi|386828262|ref|ZP_10115369.1| DNA gyrase, A subunit [Beggiatoa alba B18LD]
gi|386429146|gb|EIJ42974.1| DNA gyrase, A subunit [Beggiatoa alba B18LD]
Length = 868
Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/852 (54%), Positives = 638/852 (74%), Gaps = 10/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKEV+ I +E+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRR LFAMHE+ WN
Sbjct: 1 MERFAKEVLPINIEDEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRALFAMHELGTDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYLLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL D++KET+DF NYDG E+EPSV PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADIEKETVDFTPNYDGSEQEPSVFPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI + ++ PE I+ L+K IP PDFPTA II G S + + Y+TG+GR+
Sbjct: 181 NIPPHNLREVIKACIALIDEPELDIHALMKFIPGPDFPTAAIINGASGIVEAYHTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + I+++ELPYQVNK L EKI++LVKEKK++ I+ +RDESDK G
Sbjct: 241 YVRAKASIELDENNGKERIVVNELPYQVNKARLQEKIAELVKEKKIDGITEMRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE++R E ++VLN LY+QTQLQ FG+N++ALV+GQP++LNLK++L F+ HR+E
Sbjct: 301 IRLVIEVRRGESADVVLNNLYQQTQLQTVFGINIVALVDGQPRILNLKQLLELFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILEGL +AL NID I +I++ PQEA+ ++ +W+ +
Sbjct: 361 VVTRRTLFELRKARERAHILEGLAVALNNIDEMINLIKTAKNPQEAREGLLARSWSAQLI 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ S++ L + + Y+LS+ QAQ IL++ L RLT +EQ KI+ +Y+
Sbjct: 421 KTMMQGENAYAARPSQLPAELGL-DGEYYRLSETQAQAILELRLHRLTGLEQDKILEEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++++I +EL I N+YG RR+EI+L+ + + EDLI
Sbjct: 480 GLLNQIHELLVILNSGERLMQVIREELQAIVNEYGDE----RRTEIVLDHRDLNIEDLIP 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+ +V+TLS+ GY+KSQ +S Y+AQKRGG+GK A K+ED+I++LFIA+THD ILCF++
Sbjct: 536 DEPVVVTLSHEGYVKSQALSLYQAQKRGGKGKAATQMKEEDFIDKLFIASTHDTILCFTS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+++PQ RN+RGKPI+N+ L+ E++ +LP+ R+F +N Y+FM+T
Sbjct: 596 AGKVYWLKVYELPQAGRNARGKPIVNLLPLEESERVNAVLPV----REFTENRYIFMATV 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIA+ L D L+ A+TDG D+MLFS+ GKAVRF E++V
Sbjct: 652 SGTVKKTPLTEFSRPRTNGIIALALDEGDQLVNVAITDGQQDVMLFSNHGKAVRFTEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R++GR+ARGV G+ LEK KVI+L+++ ++LTATENGYGKRT I +Y RGTKG
Sbjct: 712 RSVGRTARGVRGILLEKGDKVISLIIT-EAGGTILTATENGYGKRTPIDDYPTKGRGTKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIKT++RNG VV A V ++MLI+ G L+RT V+ I + R+TQGV LI + ++
Sbjct: 771 VISIKTSERNGLVVGAVQVQDNDDLMLISNRGTLVRTPVAGISVVSRNTQGVGLIRLVDE 830
Query: 841 SKLCGVQRLCKI 852
L GV+++ ++
Sbjct: 831 ELLVGVEKIMEL 842
>gi|269139681|ref|YP_003296382.1| DNA gyrase subunit A [Edwardsiella tarda EIB202]
gi|387868237|ref|YP_005699706.1| DNA gyrase subunit A [Edwardsiella tarda FL6-60]
gi|267985342|gb|ACY85171.1| DNA gyrase subunit A [Edwardsiella tarda EIB202]
gi|304559550|gb|ADM42214.1| DNA gyrase subunit A [Edwardsiella tarda FL6-60]
Length = 878
Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/871 (53%), Positives = 640/871 (73%), Gaps = 13/871 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDRAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P VLPT++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + +I L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDENITIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE ++ R I++ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YVRARAEIEVDDKNGRETIVVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQ+Q +FG+NM+AL GQPKLL LKE L F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYTQTQMQVSFGINMVALHQGQPKLLTLKECLEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR TP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALVNIDPIIELIRRAPTPAEAKAALVSQAWALGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLARAGDDAARPEWLEPQYGIRDGH-YHLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ L IL + +R++E+I +EL I+ ++G + RR+EI N + + EDLI
Sbjct: 480 ALLEQIAALIFILQSPERLMEVIREELIAIREQFG----DARRTEITANTADINIEDLIE 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YW+KV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRMYWMKVYQLPEASRGARGRPIINLLPLEADERITAILPV----REYAEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDG+ ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRAAGIIAVNLNYGDELIGVDLTDGNDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + +V++L+V + + ++LT T+NGYGKR+ + EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDRVVSLIVPHGEG-AILTVTQNGYGKRSGVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVEDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
+ G+QR+ + + + +IDG A G
Sbjct: 831 EHVVGLQRVVEPVDDED---LDSIDGSAAEG 858
>gi|50120140|ref|YP_049307.1| DNA gyrase subunit A [Pectobacterium atrosepticum SCRI1043]
gi|49610666|emb|CAG74111.1| DNA gyrase subunit A [Pectobacterium atrosepticum SCRI1043]
Length = 879
Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/866 (53%), Positives = 638/866 (73%), Gaps = 10/866 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVTIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++ELL DL+KET+DF+ NYDG E+ P V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSRIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + + S+ L++ I PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHITGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR ++P EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ Y L++ QAQ IL + LQ+LT ME +K++++Y+
Sbjct: 421 ATMLERAGDDAARPEWLEPEFGIREGHYY-LTEQQAQAILDLRLQKLTGMEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ ++ +L IL++ +R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 DLLAEIAELLYILNSPERLMEVIREELEAIKTQY----SDGRRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LTDGS + MLFS GK VRF+E +V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L+ + +V++L++ + +LT T+NG+GKRT + EY +R TKG
Sbjct: 712 RSMGRTATGVRGINLQGEDRVVSLIIPRGEG-DILTVTQNGFGKRTAVSEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVDTADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDG 866
+ G+QR+ + ++ V+ ++G
Sbjct: 831 EHVVGLQRVAEPVEDEELDGVVKVEG 856
>gi|238794992|ref|ZP_04638588.1| DNA gyrase subunit A [Yersinia intermedia ATCC 29909]
gi|238725695|gb|EEQ17253.1| DNA gyrase subunit A [Yersinia intermedia ATCC 29909]
Length = 890
Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/851 (54%), Positives = 631/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L ++ + +I L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLALIEDENITIEGLMEFIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I ++W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIANSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEAEYGIRDG-RYFLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTLIGELIFILENPDRLMEVIREELVAIKEQY----NDARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E+ V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPESQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|422023150|ref|ZP_16369655.1| DNA gyrase subunit A [Providencia sneebia DSM 19967]
gi|414093918|gb|EKT55588.1| DNA gyrase subunit A [Providencia sneebia DSM 19967]
Length = 868
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/851 (53%), Positives = 634/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMH + N WN
Sbjct: 1 MSEIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++Y+ +VR+AQ FS+R L+DGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLIDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KISNE+L DL+K+T+D++ NYDG E P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKISNEILADLEKDTVDYVPNYDGTELIPEVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ E+I+G L + + + S+ L++ IP PDFPTA II G + D Y TG+G++
Sbjct: 181 NIPPHNIGEIINGCLAYIDDEDISVEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDEKNGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL NGQPK+LNLK+I+ F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALQNGQPKILNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRQAPTPAEAKAGLISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + + Y L++ QAQ IL + LQ+LT +E +K++++Y
Sbjct: 421 AAMLERAGDDAARPEWLEESFGVHDGK-YFLTEQQAQAILDLRLQKLTGLEHEKLLDEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++K++ +L IL + +R++E+I +EL +I++ YG + RR+EI N + + EDLI+
Sbjct: 480 ELLKQIEELLFILRSPERLMEVIREELVVIRDVYG----DARRTEITENTADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ RD+ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----RDYEEGYFVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +FS PR +GIIAVNL+ D LIG LTDG+ ++MLFS GK VRF E++V
Sbjct: 652 SGTVKKTPLQDFSRPRSAGIIAVNLNEGDELIGVDLTDGTNEVMLFSAQGKVVRFQEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G+RL + KV++L++ + ++LT TENGYGKRT +EY +R T+G
Sbjct: 712 RAMGRTATGVRGIRLMEDDKVVSLIIPRGEG-NILTVTENGYGKRTAEQEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGHVVGAIQVDETDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 831 EKVVGLQRVAE 841
>gi|315126544|ref|YP_004068547.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas sp.
SM9913]
gi|359445438|ref|ZP_09235174.1| DNA gyrase subunit A [Pseudoalteromonas sp. BSi20439]
gi|315015058|gb|ADT68396.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas sp.
SM9913]
gi|358040715|dbj|GAA71423.1| DNA gyrase subunit A [Pseudoalteromonas sp. BSi20439]
Length = 899
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/879 (53%), Positives = 639/879 (72%), Gaps = 38/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++ NPE +I +L+ IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLTEVVNGCLALIQNPELTITELMDYIPGPDFPTAAIINGKKGIEQAYQTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRARADIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR ++ E++LN LY QTQLQ FGMNM+AL+N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGDVGEVILNNLYSQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH LEGL IAL NID I++IR + TP EAK + W L +V
Sbjct: 361 VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKVALTARPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNI-SKLQNND-MYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ +K + +++ + + S+L D Y +S+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 KAML--DKAGEDNVARPDWLASELGIRDGQYYISEQQAQAILDLRLHKLTGLEHEKILTE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+++++ + +L IL+N +R++E+I DEL IK +YG RR+EI A + S EDL
Sbjct: 479 YQSLLELIAELLFILANPERLMEVIRDELVEIKEQYGDE----RRTEINAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K Q +++Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 INEENVVVTLSHEGYVKYQALTDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ RD+ + Y+FM+
Sbjct: 595 STAGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPV----RDYEDDKYIFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE- 717
T+ G VKKT L+ +S R SGIIAVNL+ D LIG +TDGS +IMLF+D+GK VRF E
Sbjct: 651 TAFGTVKKTPLTAYSRQRASGIIAVNLNEGDSLIGVDITDGSNEIMLFTDAGKVVRFKEA 710
Query: 718 ------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR+A GV G+++ Q+V++L+V N +
Sbjct: 711 EETAVVDENGNPVLDEEGKPEIRFKGVRPMGRTATGVRGIKMPDDQRVVSLIVPKNDG-A 769
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LT TENGYGKRT +++Y +R T+G++SIK ++RNG VV A V+ EIM+I+ G
Sbjct: 770 ILTVTENGYGKRTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGT 829
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ +GR+TQGVILI ++ ++ G+QR+ +I
Sbjct: 830 LVRTRVNEVSTVGRNTQGVILIRTIDEEQVVGLQRIEEI 868
>gi|421083097|ref|ZP_15543976.1| DNA gyrase, A subunit [Pectobacterium wasabiae CFBP 3304]
gi|401702323|gb|EJS92567.1| DNA gyrase, A subunit [Pectobacterium wasabiae CFBP 3304]
Length = 879
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/866 (53%), Positives = 636/866 (73%), Gaps = 10/866 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + + S+ L++ I PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARGEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR ++P EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT ME +K++++Y+
Sbjct: 421 STMLERAGDDAARPEWLEPEFGIRDGHYY-LTEQQAQAILDLRLQKLTGMEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL IK +Y RR+EI N + + EDLI
Sbjct: 480 ELLAEIAELLYILNSPERLMEVIREELEAIKTQYSDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS + MLFS GK VRF+E +V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L+ + +V++L++ + +LT T+NG+GKRT + EY +R TKG
Sbjct: 712 RSMGRTATGVRGINLQGEDRVVSLIIPRGEG-DILTVTQNGFGKRTAVSEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDG 866
+ G+QR+ + ++ V+ ++G
Sbjct: 831 EHVVGLQRVAEPVEDEELDGVVKVEG 856
>gi|451965543|ref|ZP_21918801.1| DNA gyrase subunit A [Edwardsiella tarda NBRC 105688]
gi|451315663|dbj|GAC64163.1| DNA gyrase subunit A [Edwardsiella tarda NBRC 105688]
Length = 877
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/871 (53%), Positives = 641/871 (73%), Gaps = 13/871 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+D++ NYDG E+ P VLPT++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLEKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + +I L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDENITIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R I++ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YVRARAEIETDAKNGRETIVVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQ+Q +FG+NM+AL GQPKLL LKE L F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQMQVSFGINMVALHQGQPKLLTLKECLEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR TP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALANIDPIIEMIRHAPTPAEAKAALVSHAWALGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPQYGIRDGHYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ L IL + +R++E+I +EL I+ ++G + RR+EI N + + EDLI
Sbjct: 480 LLLEQIAALIFILQSPERLMEVIREELIAIREQFG----DARRTEITANTADINIEDLIE 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YW+KV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRMYWMKVYQLPEASRGARGRPIINLLPLEADERITAILPV----REYAEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LTDG+ ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRAAGIIAVNLNDGDELIGVDLTDGNDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L +V++L+V + + ++LT T+NGYGKR+ + EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLADDDRVVSLIVPHGEG-AILTVTQNGYGKRSAVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG+VV A ++ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGRVVGAVQIDDGDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
+ G+QR+ + ++ + +IDG A G
Sbjct: 831 EHVVGLQRVVEPVDDEE---LDSIDGSAAEG 858
>gi|238761953|ref|ZP_04622926.1| DNA gyrase subunit A [Yersinia kristensenii ATCC 33638]
gi|238699681|gb|EEP92425.1| DNA gyrase subunit A [Yersinia kristensenii ATCC 33638]
Length = 888
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/875 (53%), Positives = 638/875 (72%), Gaps = 10/875 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + +I L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENITIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YVRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEEEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK Y + RR+EI N + + EDLI
Sbjct: 480 ELLTVIGELIFILENPERLMEVIREELVAIKELY----NDARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E+ V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPESQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTV 875
+ G+QR+ + + + ++DG S + T
Sbjct: 831 EHVVGLQRVAEPEEDDEILDGESLDGEEGSEEKTA 865
>gi|270160083|ref|ZP_06188739.1| DNA gyrase A subunit [Legionella longbeachae D-4968]
gi|289165138|ref|YP_003455276.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
longbeachae NSW150]
gi|269988422|gb|EEZ94677.1| DNA gyrase A subunit [Legionella longbeachae D-4968]
gi|288858311|emb|CBJ12179.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
longbeachae NSW150]
Length = 866
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/853 (55%), Positives = 641/853 (75%), Gaps = 18/853 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MVYLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYLLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ LL DL+KET+DF NYD E P VLP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKVAHALLADLEKETVDFSPNYDETEFAPVVLPSRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ + ++ +PE ++++++IIP PDFPTA II G + + GY TGKGR
Sbjct: 181 NIPPHNLTEVINACIALVDDPEIGLDEIMQIIPGPDFPTAAIINGRAGIIQGYRTGKGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IIRA+T IE R +III ELPYQVNK L+E+I++LV++KK+E IS LRDESDK G
Sbjct: 241 IIRARTEIETDEDTGRQSIIITELPYQVNKARLVERIAELVRDKKIEGISGLRDESDKQG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKR EI +++LN LY QTQ+QN FG+NM+ALV+GQP+ LNLK+IL YFI HR+E
Sbjct: 301 MRVVIELKRQEIADVILNNLYTQTQMQNVFGINMVALVDGQPRTLNLKQILEYFIKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KAR AH+LEGL IAL NID I +I+ + TPQ+AK ++ W P +
Sbjct: 361 VVTRRTLFELKKARSRAHLLEGLGIALANIDEMIALIKQSPTPQDAKQALLAKLWQ-PGL 419
Query: 421 SKII----GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
K + G + + ++ +S + YKLS+ QAQ IL++ L RLT +EQ KI+
Sbjct: 420 VKTMLERAGSDASRPDDLAAEFGLS----TEGYKLSEAQAQAILELRLHRLTALEQDKIL 475
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
+++E ++K + +L +IL++ +R++++I DE IK ++G RR+EII + + + E
Sbjct: 476 DEFEELLKLIRELLEILASPERLMQVIRDEFVEIKTQFGDE----RRTEIIESQEDLTIE 531
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLI +++V+TLS+ GY+K QPIS Y+AQ+RGG+GK A KDED++++L IA+THD +L
Sbjct: 532 DLITEENVVVTLSHQGYVKYQPISAYQAQRRGGKGKSATNVKDEDFVSRLVIASTHDTLL 591
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CFSN+G+LYWLK +++P SR SRG+PIIN+ L E+I +LP+ R++ YVF
Sbjct: 592 CFSNHGKLYWLKAYELPLASRISRGRPIINILPLAEGEEINAMLPV----REYLDGYYVF 647
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
M+T G VKK L+ FS PR +GIIAV+L ++D L+G +TDGS DIMLF+D+GK VRF+
Sbjct: 648 MATKKGTVKKVPLNAFSRPRSNGIIAVDLDDDDSLVGVDITDGSKDIMLFTDAGKVVRFD 707
Query: 717 ENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNR 776
EN VR MGR+ARGV G+R+E++Q VI+L+V++ ++LTATENGYGKRT I EY R
Sbjct: 708 ENKVRPMGRTARGVRGIRIEEEQAVISLVVAHPDG-TILTATENGYGKRTSIDEYRVSGR 766
Query: 777 GTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILIT 836
G +G+ISI+ N+RNGKVV + V E MLIT G L+R +V+E+ +GR+TQGV LI
Sbjct: 767 GGQGVISIQVNERNGKVVRSVQVTDADEAMLITDKGTLVRFKVNELSVIGRNTQGVRLIN 826
Query: 837 VENKSKLCGVQRL 849
V + K+ G+Q++
Sbjct: 827 VSSGEKVVGMQKI 839
>gi|386035801|ref|YP_005955714.1| DNA gyrase subunit A [Klebsiella pneumoniae KCTC 2242]
gi|424831592|ref|ZP_18256320.1| DNA gyrase, A subunit [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|425092561|ref|ZP_18495646.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|339762929|gb|AEJ99149.1| DNA gyrase subunit A [Klebsiella pneumoniae KCTC 2242]
gi|405611787|gb|EKB84553.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|414709027|emb|CCN30731.1| DNA gyrase, A subunit [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
Length = 878
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/876 (52%), Positives = 642/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAENDSVVSLIIPRGEG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDDDIA 863
>gi|238895767|ref|YP_002920503.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|262043282|ref|ZP_06016413.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|330000608|ref|ZP_08303751.1| DNA gyrase, A subunit [Klebsiella sp. MS 92-3]
gi|419764017|ref|ZP_14290257.1| DNA gyrase, A subunit [Klebsiella pneumoniae subsp. pneumoniae DSM
30104]
gi|425082483|ref|ZP_18485580.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|428933833|ref|ZP_19007374.1| DNA gyrase subunit A [Klebsiella pneumoniae JHCK1]
gi|238548085|dbj|BAH64436.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259039381|gb|EEW40521.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|328537950|gb|EGF64129.1| DNA gyrase, A subunit [Klebsiella sp. MS 92-3]
gi|397742600|gb|EJK89818.1| DNA gyrase, A subunit [Klebsiella pneumoniae subsp. pneumoniae DSM
30104]
gi|405600735|gb|EKB73900.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|426304274|gb|EKV66422.1| DNA gyrase subunit A [Klebsiella pneumoniae JHCK1]
Length = 877
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/876 (52%), Positives = 642/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAENDSVVSLIIPRGEG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDDDIA 863
>gi|365137342|ref|ZP_09344061.1| DNA gyrase subunit A [Klebsiella sp. 4_1_44FAA]
gi|425075675|ref|ZP_18478778.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425086311|ref|ZP_18489404.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|363656206|gb|EHL94976.1| DNA gyrase subunit A [Klebsiella sp. 4_1_44FAA]
gi|405594075|gb|EKB67498.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405605226|gb|EKB78292.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
Length = 877
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/876 (52%), Positives = 642/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAENDSVVSLIIPRGEG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDDDIA 863
>gi|348029196|ref|YP_004871882.1| DNA gyrase subunit A [Glaciecola nitratireducens FR1064]
gi|347946539|gb|AEP29889.1| DNA gyrase subunit A [Glaciecola nitratireducens FR1064]
Length = 879
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/855 (54%), Positives = 641/855 (74%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE++ I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MTDNAKEILPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQHFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET++F+ NYDG+E P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVNFVPNYDGQEHIPEVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G + +++NPE SI++L++IIP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCIELINNPELSIDELLEIIPGPDFPTAAIISGRKGIVEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE+ + T II+ ELPYQVNK L+EKI+ LVKEK++E +S LRDESDK G
Sbjct: 241 YLRARAEIEQEDNGKET-IIVHELPYQVNKARLIEKIADLVKEKRIEGVSALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KRNE E++LN LY TQLQ FG+NM+AL N QP++ NLK+IL F+LHR+E
Sbjct: 300 MRIVIEVKRNESGEVLLNHLYANTQLQTVFGINMVALDNKQPRIFNLKDILQKFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KAR+ AHILEGL IAL NID I++I+++ +P +AK +I W+L DV
Sbjct: 360 VVTRRTVFELKKARDRAHILEGLAIALVNIDPIIELIKASQSPSDAKKSLISQGWDLGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++++ G N + ++ I Q Y L++ QAQ IL + L +LT +E KI++
Sbjct: 420 AEMLSRAGNNAARPDWLAPEFGIRDGQ----YFLTEEQAQAILDLRLNKLTGLEHDKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ + +L IL++S+R++EII +EL +++++G RR+EI + ED
Sbjct: 476 EYKALLDTIAELLHILASSERLMEIIREELEAVRDEFGDE----RRTEITAATHDIDIED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K Q +S+Y AQ+RGG+GK A K ED+I +L +ANTHD+ILC
Sbjct: 532 LIEREDVVVTLSREGYVKYQKLSDYEAQRRGGKGKSATKMKGEDFIEKLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F +VFM
Sbjct: 592 FSTRGRLYWLKVYQLPLASRNARGRPIVNILPLEEGERITAILPI----QEFEAGKFVFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L+ +S PR +GIIAVNL++ + LIG LTDG +IMLFSD+GK VRF+E
Sbjct: 648 ATTNGTVKKTELTQYSRPRANGIIAVNLNDGNELIGVDLTDGESEIMLFSDAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR MGR+A GV G+RL + +KV++L+V + +LTATENG+GKRT I++Y +R
Sbjct: 708 DQVRPMGRTATGVRGIRLMETEKVVSLIVPKGEG-DILTATENGFGKRTPIEQYPAKSRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
TKG++SIK ++RNG VV A V+ EIMLI+ G L+RTR SE+ +GR+TQGV LI
Sbjct: 767 TKGVVSIKVSERNGLVVGAIQVDESKEIMLISDQGTLVRTRASEVSTVGRNTQGVRLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ ++
Sbjct: 827 AEDELVVGLQRIDEL 841
>gi|449052093|ref|ZP_21732173.1| DNA gyrase subunit A [Klebsiella pneumoniae hvKP1]
gi|448876046|gb|EMB11046.1| DNA gyrase subunit A [Klebsiella pneumoniae hvKP1]
Length = 877
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/876 (52%), Positives = 642/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAENDSVVSLIIPRGEG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDDDIA 863
>gi|418019363|ref|ZP_12658866.1| DNA gyrase [Candidatus Regiella insecticola R5.15]
gi|347605307|gb|EGY29770.1| DNA gyrase [Candidatus Regiella insecticola R5.15]
Length = 866
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/859 (54%), Positives = 636/859 (74%), Gaps = 18/859 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAREITPVNIEAELKGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGDS AAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELLADLDKETVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + S+ L++ IP PDFPT II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVIEGCLAYIDDENISVEALMRHIPGPDFPTGAIINGGKGIKEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ + + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YLRARAEVVIDAKTQRETIIVHEIPYQVNKAKLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPK+L LKEIL F+ HR+E
Sbjct: 301 MRVVIEIKRDAVGEVVLNNLYSLTQLQITFGINMVALHAGQPKILPLKEILQSFVSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILE L +AL +ID I++IR T AKN ++E+ W L DV
Sbjct: 361 VVTRRTMFELRKARDRAHILEALVVALAHIDTIIELIRHAPTAAAAKNGLMENAWPLSDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQ--------NNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + + TI + N ++ + +++ Y L++ QAQ IL + LQ+LT ME
Sbjct: 421 DEMLKRSSGDQITIGR-NEDARPEWLEKEFGIHDESYHLTEQQAQAILDLRLQKLTGMEH 479
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
K++++Y++++ K+++L IL+ +R++EII DELN+IK +Y K+ RR+ II+N +
Sbjct: 480 DKLLDEYKDLLIKIVELISILATPERLMEIIKDELNVIKEQY----KDPRRTNIIVNNLE 535
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+ EDLI +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K ED+I+QL +ANTH
Sbjct: 536 INNEDLINQEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKGEDFIDQLLVANTH 595
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D ILCFS+ G LYW+KV+Q+P+ SR++RG+PI+N+ LK E+IT ILP+ R++
Sbjct: 596 DTILCFSSKGSLYWMKVYQLPEASRSARGRPIVNLLPLKENERITAILPV----REYDAG 651
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++VFM+T+ GIVKKT L FS PRK GIIA+NL+ D LIG ALTDGS ++MLFS GKA
Sbjct: 652 HHVFMATACGIVKKTALDCFSRPRKDGIIAINLNEGDELIGVALTDGSNEVMLFSTDGKA 711
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+E+ VR++GR A G+ G++L ++++L++ + + +LT TENGYGKRTL +EY
Sbjct: 712 VRFSESKVRSVGRKAAGMRGIKLNDDDRLVSLIIPQKEGE-ILTITENGYGKRTLAEEYP 770
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
R TKG++SIKT++RNG VVAA V +IM+IT G L+RTRVSEI GR+TQGV
Sbjct: 771 TKGRATKGVLSIKTSERNGNVVAAIQVMTSDQIMIITDAGTLVRTRVSEINVQGRNTQGV 830
Query: 833 ILITVENKSKLCGVQRLCK 851
LI + G+QR+ +
Sbjct: 831 RLIRTAKNEHVVGLQRVAE 849
>gi|206578949|ref|YP_002237364.1| DNA gyrase subunit A [Klebsiella pneumoniae 342]
gi|290508495|ref|ZP_06547866.1| DNA gyrase, A subunit [Klebsiella sp. 1_1_55]
gi|206568007|gb|ACI09783.1| DNA gyrase, A subunit [Klebsiella pneumoniae 342]
gi|289777889|gb|EFD85886.1| DNA gyrase, A subunit [Klebsiella sp. 1_1_55]
Length = 877
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/876 (52%), Positives = 642/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAENDSVVSLIIPRGEG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDDDIA 863
>gi|152971178|ref|YP_001336287.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150956027|gb|ABR78057.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 877
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/876 (52%), Positives = 642/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDYAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAENDSVVSLIIPRGEG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDDDIA 863
>gi|29141106|ref|NP_804448.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|378958738|ref|YP_005216224.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|29136732|gb|AAO68297.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|374352610|gb|AEZ44371.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
Length = 878
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/851 (54%), Positives = 635/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ L+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHGLMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QENVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|292488816|ref|YP_003531703.1| DNA gyrase subunit A [Erwinia amylovora CFBP1430]
gi|292899967|ref|YP_003539336.1| DNA gyrase subunit A [Erwinia amylovora ATCC 49946]
gi|291199815|emb|CBJ46938.1| DNA gyrase subunit A [Erwinia amylovora ATCC 49946]
gi|291554250|emb|CBA21544.1| DNA gyrase, A subunit [Erwinia amylovora CFBP1430]
gi|312172974|emb|CBX81229.1| DNA gyrase, A subunit [Erwinia amylovora ATCC BAA-2158]
Length = 878
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/882 (53%), Positives = 647/882 (73%), Gaps = 19/882 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPEVMPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + ++ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIADENITVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 YIRARGEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMPLKDILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRTIFELRKAR+ AHILE L +AL NID I++IR+ TP EAK +I W L +V
Sbjct: 361 VITRRTIFELRKARDRAHILEALAVALANIDPIIELIRAAPTPAEAKAGLIARPWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G N + + I +N Y L++ QAQ IL + LQ+LT +E +K+++
Sbjct: 421 SAMLERAGDNAARPEWLEEQYGI----HNGQYYLTEQQAQAILDLRLQKLTGLEHEKLLD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y++++ ++ +L IL++S+R++E+I +EL +I++++G RR+EI N + + ED
Sbjct: 477 EYKDLLAQIAELLRILASSERLMEVIREELELIRDQFGDK----RRTEITANTADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILC
Sbjct: 533 LINQEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM
Sbjct: 593 FSSRGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYAEGWNIFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L++FS PR +GIIAVNL ++D LIG +LT+GS + MLFS +GK VRF E
Sbjct: 649 ATASGTVKKTALTDFSRPRSAGIIAVNLRDDDELIGVSLTNGSDEAMLFSAAGKVVRFAE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
++VR MGR+A GV G++L + +V++L+V + +++T T+NGYGKRT EY +R
Sbjct: 709 SAVRTMGRTASGVRGIKLAEGDRVVSLIVPRDDG-AIMTVTQNGYGKRTANVEYPTKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 768 TQGVISIKVTERNGPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRT 827
Query: 838 ENKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + ++ + IDG A G +A V
Sbjct: 828 AEDENVVGLQRVAEPVAEEE---LDAIDGSAAEGDDDIAPEV 866
>gi|227328225|ref|ZP_03832249.1| DNA gyrase subunit A [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 879
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/866 (53%), Positives = 636/866 (73%), Gaps = 10/866 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + + S+ L++ I PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR ++P EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT ME +K++++Y+
Sbjct: 421 ATMLERAGDDAARPEWLEPEFGIRDGRYY-LTEQQAQAILDLRLQKLTGMEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL IK +Y RR+EI N + + EDLI
Sbjct: 480 ELLAEIAELLYILNSPERLMEVIREELEAIKTQYSDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS + MLFS GK VRF+E +V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L+ + +V++L++ + +LT T+NG+GKRT + EY +R TKG
Sbjct: 712 RSMGRTATGVRGINLQGEDRVVSLIIPRGEG-DILTVTQNGFGKRTAVSEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDG 866
+ G+QR+ + ++ V+ ++G
Sbjct: 831 EHVVGLQRVAEPVEDEELDGVVKVEG 856
>gi|374336076|ref|YP_005092763.1| DNA gyrase subunit A [Oceanimonas sp. GK1]
gi|372985763|gb|AEY02013.1| DNA gyrase subunit A [Oceanimonas sp. GK1]
Length = 871
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/852 (54%), Positives = 626/852 (73%), Gaps = 16/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ I +EEE+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MTDLAREIMPINIEEELKRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMDKIAHELLADLDKETVDWVPNYDGTELIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L ++ + SI+ LI++IP PDFPT GII G S + D Y TG+G++
Sbjct: 181 NIPPHNLNEVVDGCLALIDDEHISIDQLIELIPGPDFPTGGIINGKSGIFDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA IE + R II+ ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YVRALAEIETDEKTGRETIIVSELPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE++R E+ E++LN LY QTQ+Q FG+NM+AL N QP+ NLK++L FI HR+E
Sbjct: 301 MRIVIEVRRGEVGEVILNNLYAQTQMQTVFGINMVALDNNQPRTFNLKDMLECFIQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL IAL NID I++IR + TP EAK ++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAIALANIDPVIELIRRSPTPAEAKAGLLAQGWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL++ L RLT +E +KI+
Sbjct: 421 ASMLERAGDDAARPEWLEPEYGIRDGQ----YYLTEQQAQAILELRLHRLTGLEHEKILE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL IK ++G RR+EI ++ + ED
Sbjct: 477 EYKALLDQIAELLHILNSTTRLMEVIREELEAIKEQFGDQ----RRTEITTSSAEINLED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+++Y AQ+RGGRGK A K+ED++ +L +ANTHD ILC
Sbjct: 533 LITQEDVVVTLSHQGYVKYQPLTDYEAQRRGGRGKSATRMKEEDFVERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G++YWLKV+Q+P+ SR +RG+PI+N+ L E+IT ILP+ +++ + VF
Sbjct: 593 FSTAGKVYWLKVYQLPEASRTARGRPIVNLLPLGEDERITAILPV----KEYADDKAVFF 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ FS P SGI A+NL+ D LIG +TDG +IMLFSD+GK VRF+E
Sbjct: 649 ATRQGTVKKTELTAFSRPLASGIRAINLTEGDELIGVDITDGDNEIMLFSDAGKVVRFHE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV G+RL V++L+V + ++LTAT NGYGKRT ++EY +R
Sbjct: 709 DQVRAMGRTATGVRGIRLGDDDSVVSLIVPRGEG-AILTATANGYGKRTSLEEYPTKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T G++SIK + RNG VV A V+ +EIMLIT GG L+RTRVSE+ + R+T GV LI
Sbjct: 768 TLGVVSIKVSDRNGAVVGAIQVDEANEIMLITNGGTLVRTRVSEVSLISRNTAGVRLIRT 827
Query: 838 ENKSKLCGVQRL 849
++ G+QR+
Sbjct: 828 GEDEQVVGLQRI 839
>gi|37526938|ref|NP_930282.1| DNA gyrase subunit A [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36786371|emb|CAE15424.1| DNA gyrase subunit A [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 878
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/851 (54%), Positives = 625/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+DF+ NYDG E+ P V+PT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKVAHELLADLEKETVDFVPNYDGTEQIPEVMPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENISIEGLMQYIPGPDFPTAAIINGRRGIQEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + R I++ E+PYQVNK L+EKI++LVKEK++E +S LRDESDK G
Sbjct: 241 YIRARAEIEVDEKNGRETILVHEIPYQVNKARLIEKIAELVKEKRIEGVSALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPKLLNLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKLLNLKDIISAFVCHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L +AL NID I++IR STP EAK ++ W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEALAVALANIDPIIELIRFASTPAEAKAALVAQPWELGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + + Y L++ QAQ IL + LQ+LT +E +K++++Y
Sbjct: 421 ATMLERAGDDAARPEWLESQYGVHEGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTLIGELLFILENPERLMEVIREELLAIKAQY----SDARRTEITENTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDKLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + YVFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEQNERITAILPV----REYEEGLYVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +FS PR +GI+AVNL++ D LIG LTDGS ++MLFS GK VRF E +V
Sbjct: 652 SGTVKKTALQDFSRPRSAGILAVNLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFAEEAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G++L + KV++L++ + + +LT TENGYGKRT EY +R T+G
Sbjct: 712 RSMGRTATGVRGIKLNGEDKVVSLIIPRGEGE-ILTVTENGYGKRTAENEYPIKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGNVIGAIQVEPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 831 EKVVGLQRVAE 841
>gi|238751208|ref|ZP_04612702.1| DNA gyrase subunit A [Yersinia rohdei ATCC 43380]
gi|238710482|gb|EEQ02706.1| DNA gyrase subunit A [Yersinia rohdei ATCC 43380]
Length = 888
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/851 (54%), Positives = 627/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + +I L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENITIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIANPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTIIGELIFILENPERLMEVIREELMAIKEQY----NDPRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPEGQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L KV++L++ +LT TENGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDKVVSLIIPRGDG-DILTVTENGYGKRTEVTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVATTDQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|417350232|ref|ZP_12128667.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|353570665|gb|EHC34872.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
Length = 890
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/888 (52%), Positives = 647/888 (72%), Gaps = 25/888 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIR------------AKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLEC 288
IR A+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E
Sbjct: 241 YIRARAGRGKVYIRAARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEG 300
Query: 289 ISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLK 348
IS LRDESDK GMRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK
Sbjct: 301 ISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLK 360
Query: 349 EILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKN 408
+I+ F+ HR+EV+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK
Sbjct: 361 DIISAFVRHRREVVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKA 420
Query: 409 KIIESTWNLPDVSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLT 468
+I W+L +V+ ++ + + +++ Y L++ QAQ IL + LQ+LT
Sbjct: 421 ALISRPWDLGNVAAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLT 479
Query: 469 NMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIIL 528
+E +K++++Y+ +++++ +L IL ++ R++E+I +E+ +I++++G RR+EI
Sbjct: 480 GLEHEKLLDEYKELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITA 535
Query: 529 NAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFI 588
N+ + + EDLI+ +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +
Sbjct: 536 NSADINIEDLISQEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLV 595
Query: 589 ANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRD 648
ANTHD ILCFS+ GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R+
Sbjct: 596 ANTHDTILCFSSRGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----RE 651
Query: 649 FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSD 708
+ + VFM+T+ G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS
Sbjct: 652 YEEGVNVFMATASGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSA 711
Query: 709 SGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLI 768
+GK VRF E++VRAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT
Sbjct: 712 AGKVVRFKEDAVRAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAA 770
Query: 769 KEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRS 828
+EY +R T+G+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+
Sbjct: 771 EEYPTKSRATQGVISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRN 830
Query: 829 TQGVILITVENKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
TQGVILI + G+QR+ + ++ + IDG A G +A
Sbjct: 831 TQGVILIRTAEDENVVGLQRVAEPVDDEE---LDAIDGSVAEGDEDIA 875
>gi|332162346|ref|YP_004298923.1| DNA gyrase subunit A [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325666576|gb|ADZ43220.1| DNA gyrase subunit A [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 885
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/851 (54%), Positives = 629/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + +I L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENITIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGGDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK Y + RR+EI N + + EDLI
Sbjct: 480 ELLTVIAELIFILENPERLMEVIREELVAIKELY----NDARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDG+ ++MLFS GK VRF E+ V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGTNEVMLFSALGKVVRFPESQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTTED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|300717615|ref|YP_003742418.1| DNA gyrase subunit A [Erwinia billingiae Eb661]
gi|299063451|emb|CAX60571.1| DNA gyrase subunit A [Erwinia billingiae Eb661]
Length = 887
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/879 (52%), Positives = 645/879 (73%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P+V+PTR+PNLLING+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTRVPNLLINGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI G L + + ++ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVISGCLAYIDDENITVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R III E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 YIRARGEVETDAKTGRETIIIHEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVVEVKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMPLKDILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL N+D I++IR + P EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANLDPIIELIRHAANPAEAKAGLVARPWALGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ N + + +++ + Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDNAARPEWLEDEFGIRDGEYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL +S+R++E+I +EL +I++++G RR+EI N + + EDLI
Sbjct: 480 ELLDQIAELIRILESSERLMEVIREELELIRDQFGDK----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYAEGWNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL +ED LIG +LT+G+ + MLFS +GK VRF E +V
Sbjct: 652 CGTVKKTALTEFSRPRSAGIIAVNLRDEDELIGVSLTNGADEAMLFSAAGKVVRFAETAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + +V++L+V ++ +++T T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTASGVRGIKLAENDRVVSLIVP-QEEGAIMTVTQNGYGKRTNTSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVIGAVQVVDSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + ++ + IDG A G +A V
Sbjct: 831 ENVVGLQRVAEPVAEEE---LDGIDGTVAEGDEDIAPEV 866
>gi|392555429|ref|ZP_10302566.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
undina NCIMB 2128]
Length = 899
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/879 (53%), Positives = 638/879 (72%), Gaps = 38/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++ NPE +I +L+ IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLTEVVNGCLALIQNPELTITELMDYIPGPDFPTAAIINGKKGIEQAYQTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRARADIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR ++ E++LN LY QTQLQ FGMNM+AL+N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGDVGEVILNNLYSQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH LEGL IAL NID I++IR + TP EAK + W L +V
Sbjct: 361 VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKVALTARPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNI-SKLQNND-MYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ +K + +++ + + S+L D Y +S+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 KAML--DKAGEDNVARPDWLASELGIRDGQYYISEQQAQAILDLRLHKLTGLEHEKILTE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y++++ + +L IL++ +R++E+I DEL IK +YG RR+EI A + S EDL
Sbjct: 479 YQSLLDLIAELLFILASPERLMEVIRDELVEIKEQYGDE----RRTEINAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 INEENVVVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ RD+ + Y+FM+
Sbjct: 595 STAGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPV----RDYEDDKYIFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE- 717
T+ G VKKT L+ +S R SGIIAVNL+ D LIG +TDGS +IMLF+D+GK VRF E
Sbjct: 651 TAFGTVKKTPLTAYSRQRASGIIAVNLNEGDSLIGVDITDGSNEIMLFTDAGKVVRFKEA 710
Query: 718 ------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR+A GV G+++ Q+V++L+V N +
Sbjct: 711 EETTVVDENGNPVLDEEGKPAIRFKGVRPMGRTATGVRGIKMPDDQRVVSLIVPKNDG-A 769
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LT TENGYGKRT +++Y +R T+G++SIK ++RNG VV A V+ EIM+I+ G
Sbjct: 770 ILTVTENGYGKRTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGT 829
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ +GR+TQGVILI ++ ++ G+QR+ +I
Sbjct: 830 LVRTRVNEVSTVGRNTQGVILIRTIDEEQVVGLQRIEEI 868
>gi|378580388|ref|ZP_09829045.1| DNA gyrase (type II topoisomerase), subunit A [Pantoea stewartii
subsp. stewartii DC283]
gi|377816712|gb|EHT99810.1| DNA gyrase (type II topoisomerase), subunit A [Pantoea stewartii
subsp. stewartii DC283]
Length = 880
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/871 (53%), Positives = 642/871 (73%), Gaps = 13/871 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYYTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+++LL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHDLLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + S+ L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLREVINGCLAYIEDENISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R I+I ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVEVDAKTGRETIVIHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMALKEILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR TP EAK +I +W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPTPAEAKAGLISQSWALGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEAQFGIRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L ILS+S+R++E+I +EL ++++++G RR+EI N+ + + EDLI
Sbjct: 480 QLLDQIAELLHILSSSERLMEVIREELELMRDQFGDD----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIA+NL ++D LIG ALT+G+ + MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTGLQEFSRPRSAGIIAINLRDDDELIGVALTNGNDEAMLFSAAGKVVRFAESAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + +V++L+V ++ ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTASGVRGIKLAQNDRVVSLIVP-REEGAILTVTQNGYGKRTANSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVIGAVQVVDSDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
+ G+QR+ + ++ + IDG A G
Sbjct: 831 ENVVGLQRVAEPVEEEE---LDAIDGSVAEG 858
>gi|227114440|ref|ZP_03828096.1| DNA gyrase subunit A [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 879
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/866 (53%), Positives = 635/866 (73%), Gaps = 10/866 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + + S+ L++ I PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR +P EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPSPAEAKAALIAQAWELGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT ME +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEYGIRDGRYY-LTEQQAQAILDLRLQKLTGMEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL IK +Y RR+EI N + + EDLI
Sbjct: 480 ALLAEIAELLYILNSPERLMEVIREELEAIKTQYSDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS + MLFS GK VRF+E +V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L+ + +V++L++ + +LT T+NG+GKRT + EY +R TKG
Sbjct: 712 RSMGRTATGVRGINLQGEDRVVSLIIPRGEG-DILTVTQNGFGKRTAVSEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDG 866
+ G+QR+ + ++ V+ ++G
Sbjct: 831 EHVVGLQRVAEPVEDEELDGVVKVEG 856
>gi|386741857|ref|YP_006215036.1| DNA gyrase subunit A [Providencia stuartii MRSN 2154]
gi|384478550|gb|AFH92345.1| DNA gyrase subunit A [Providencia stuartii MRSN 2154]
Length = 867
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/851 (54%), Positives = 629/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD+++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDIAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHEMLADLEKETVDFVPNYDGTEQIPEVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G L + + + SI L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVISGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDEKNGRETIIVSEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+LNLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L +AL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARERAHILEALAVALANIDPIIELIRRAPTPAEAKAGLIARPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + + Y L++ QAQ IL + LQ+LT +E +K++ +Y
Sbjct: 421 AAMLERAGDDAARPEWLEEQYGVHDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLEEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++K++ +L IL + +R++E+I +EL I+ Y + RR+EI N + + EDLI+
Sbjct: 480 DLLKQIEELLYILRSPERLMEVIREELEAIRELY----NDARRTEITENTADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + YVFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----REYEEGYYVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +FS PR +GIIAVNL+ D LIG LT+GS ++MLFS GK VRF E++V
Sbjct: 652 SGTVKKTALQDFSRPRSAGIIAVNLNEGDELIGVDLTNGSNEVMLFSAQGKVVRFAEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+RL + KV++L++ + +LT TENGYGKRT +EY +R T+G
Sbjct: 712 RPMGRTATGVRGIRLADEDKVVSLIIPRGEGH-ILTVTENGYGKRTAEQEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI +
Sbjct: 771 VISIKVSERNGNVVGAIQVDETDQIMMITNAGTLVRTRVSEVSVVGRNTQGVTLIRTAEE 830
Query: 841 SKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 831 EKVVGLQRVAE 841
>gi|387814670|ref|YP_005430157.1| DNA gyrase subunit A [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381339687|emb|CCG95734.1| DNA gyrase (type II topoisomerase), subunit A [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 856
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/851 (53%), Positives = 638/851 (74%), Gaps = 11/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYPLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL DLDKET+D++ NYDG E+ P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKIAHSLLADLDKETVDYVDNYDGTERIPEVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++ NP+ ++++L++ IP PDFPT GII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVVNGCLALIDNPDLTVDELMEFIPGPDFPTQGIINGRAGIVEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE+ + R +III ELPYQ+NK L+EKI++LVKEK+LE IS LRDES+K G
Sbjct: 241 YIRARHEIEQDKKTGRESIIITELPYQLNKARLIEKIAELVKEKRLEGISELRDESNKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E P++++N L+ QTQL+ FG+NM+AL+NG+PK LNLKE+L F+ HR+E
Sbjct: 301 IRVVIELRRGENPDVIINNLFAQTQLETVFGINMVALINGEPKTLNLKEMLDAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE HILEGLT+AL NID I++I+ + + EAK K+++ W DV
Sbjct: 361 VVTRRTIYELRKARERGHILEGLTVALANIDEIIELIKQSPSAAEAKEKLMDKGWAPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ ++ + I L+ +Y LS QAQ IL + L RLT +E +K+ N+Y+
Sbjct: 421 LAMLERAGEDACRPDDLPEIYGLREG-LYHLSPEQAQAILDLRLHRLTGLETEKLQNEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++K+ DL DIL + +R++++I DEL I ++YG RR+EI + + + DLI
Sbjct: 480 EILEKIADLLDILGDPERLMQVIRDELAEIVSQYGDE----RRTEITSSRRDLTIADLID 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+T+S+ GY K+Q + +Y+AQ+RGGRGK A KDED+I +L +AN+HD ILCFSN
Sbjct: 536 EEDLVVTISHSGYAKTQAVEDYQAQRRGGRGKAATSMKDEDFIEKLLVANSHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWL+V++IP+GSR SRG+P++N+ L E+IT LP+ RD+P++ +V M+TS
Sbjct: 596 KGKVYWLRVFEIPRGSRGSRGRPMVNILPLDEGERITTFLPV----RDYPEDQFVLMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L NFS PR SG+IA+NL D LIGAA+TDGS ++MLFS +GKAVRF E V
Sbjct: 652 AGVVKKTPLPNFSRPRSSGLIALNLDEGDTLIGAAITDGSAEVMLFSSAGKAVRFQEEQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R M R+ARGV G+++ + V++L++ + +LTA+E+GYGKRT I E+ ++RG++G
Sbjct: 712 RPMSRTARGVRGIKMPEGHHVVSLIIP-QEGGVILTASEHGYGKRTAIDEFPAYSRGSQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV-EN 839
+I+++ ++RNG +V A + ++MLI+ G L+RTR E+ + R+TQGV LI + +
Sbjct: 771 VIAMQCSERNGNLVTALQLFDGDQMMLISDKGTLVRTRTDEVSVLSRNTQGVRLIRLAQE 830
Query: 840 KSKLCGVQRLC 850
+L GV+R+
Sbjct: 831 DERLVGVERIA 841
>gi|77360364|ref|YP_339939.1| DNA gyrase subunit A [Pseudoalteromonas haloplanktis TAC125]
gi|76875275|emb|CAI86496.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
haloplanktis TAC125]
Length = 899
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/879 (53%), Positives = 642/879 (73%), Gaps = 38/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A ++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MTDLAHGILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DL+KET+DF+ NYDG E+ P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++ NPE SI +L+ IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLTEVVNGCLALIQNPELSILELMDYIPGPDFPTAAIINGKKGIEQAYLTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + +R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRARAEIEVDEKTHRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR ++ E++LN LY QTQLQ FGMNM+AL+N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGDVGEVILNNLYAQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH+LEGL IAL NID I++IR++ TP EAK + +W L +V
Sbjct: 361 VVTRRTVFDLRKARDRAHMLEGLAIALANIDPIIELIRNSPTPAEAKVALTARSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNI-SKLQNND-MYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ +K + +++ + + ++L D Y +S+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 KAML--DKAGEDNVARPDWLAAELGIRDGQYFISEQQAQAILDLRLHKLTGLEHEKILTE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y++++ + +L IL+ +R++E+I DEL IK +YG RR+EI A + S EDL
Sbjct: 479 YQSLLDLIAELLHILATPERLMEVIRDELVEIKAQYGDE----RRTEINAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 ITEENVVVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ Y+FM+
Sbjct: 595 STAGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPV----REYAEDKYIFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE- 717
T+ G VKKT L+ +S R SGIIAVNL+ D LIG +TDGS +IMLF+D+GK VRF E
Sbjct: 651 TAFGTVKKTPLTAYSRQRASGIIAVNLNEGDSLIGVDVTDGSNEIMLFTDAGKVVRFKEA 710
Query: 718 ------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR+A GV G+++ + Q+V++L+V +
Sbjct: 711 EETTVVDENGNPVLDEEGNPEIRFKGVRPMGRTATGVRGIKMPEGQRVVSLIVPKTDG-A 769
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LT TENGYGKRTL+++Y +R T+G++SIK ++RNG VV A V+ EIM+I+ G
Sbjct: 770 ILTVTENGYGKRTLLEDYPAKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGT 829
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ +GR+TQGVILI ++ ++ G+QR+ +I
Sbjct: 830 LVRTRVNEVSTVGRNTQGVILIRTIDEEQVVGLQRIEEI 868
>gi|288934292|ref|YP_003438351.1| DNA gyrase subunit alpha [Klebsiella variicola At-22]
gi|288889021|gb|ADC57339.1| DNA gyrase, A subunit [Klebsiella variicola At-22]
Length = 877
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/876 (52%), Positives = 642/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKVALVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAENDSVVSLIIPRGEG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEGDDDIA 863
>gi|402779730|ref|YP_006635276.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|402540666|gb|AFQ64815.1| DNA gyrase subunit A [Klebsiella pneumoniae subsp. pneumoniae 1084]
Length = 877
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/876 (52%), Positives = 642/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L+ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYVDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL +I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELELIRDQFGDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTFGQDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + V++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAENDSVVSLIIPRGEG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + IDG A G +A
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSAAEGDDDIA 863
>gi|120553949|ref|YP_958300.1| DNA gyrase subunit A [Marinobacter aquaeolei VT8]
gi|120323798|gb|ABM18113.1| DNA gyrase subunit A [Marinobacter aquaeolei VT8]
Length = 856
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/851 (53%), Positives = 638/851 (74%), Gaps = 11/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYPLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL DLDKET+D++ NYDG E+ P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKIAHSLLADLDKETVDYVDNYDGTERIPEVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++ NP+ ++++L++ IP PDFPT GII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVVNGCLALIDNPDLTVDELMEFIPGPDFPTQGIINGRAGIVEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE+ + R +III ELPYQ+NK L+EKI++LVKEK+LE IS LRDES+K G
Sbjct: 241 YIRARHEIEQDKKTGRESIIITELPYQLNKARLIEKIAELVKEKRLEGISELRDESNKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E P++++N L+ QTQL+ FG+NM+AL+NG+PK LNLKE+L F+ HR+E
Sbjct: 301 IRVVIELRRGENPDVIINNLFAQTQLETVFGINMVALINGEPKTLNLKEMLDAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE HILEGLT+AL NID I++I+ + + EAK K+++ W DV
Sbjct: 361 VVTRRTIYELRKARERGHILEGLTVALANIDEIIELIKRSPSAAEAKEKLMDKGWAPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ ++ + I L+ +Y LS QAQ IL + L RLT +E +K+ N+Y+
Sbjct: 421 LAMLERAGEDACRPDDLPEIYGLREG-LYHLSPEQAQAILDLRLHRLTGLETEKLQNEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++K+ DL DIL + +R++++I DEL I ++YG RR+EI + + + DLI
Sbjct: 480 EILEKIADLLDILGDPERLMQVIRDELAEIVSQYGDE----RRTEITSSRRDLTIADLID 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+T+S+ GY K+Q + +Y+AQ+RGGRGK A KDED+I +L +AN+HD ILCFSN
Sbjct: 536 EEDLVVTISHSGYAKTQAVEDYQAQRRGGRGKAATSMKDEDFIEKLLVANSHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWL+V++IP+GSR SRG+P++N+ L E+IT LP+ RD+P++ +V M+TS
Sbjct: 596 KGKVYWLRVFEIPRGSRGSRGRPMVNILPLDEGERITTFLPV----RDYPEDQFVLMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L NFS PR SG+IA+NL D LIGAA+TDGS ++MLFS +GKAVRF E V
Sbjct: 652 AGVVKKTPLPNFSRPRSSGLIALNLDEGDTLIGAAITDGSAEVMLFSSAGKAVRFQEEQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R M R+ARGV G+++ + V++L++ + +LTA+E+GYGKRT I E+ ++RG++G
Sbjct: 712 RPMSRTARGVRGIKMPEGHHVVSLIIP-QEGGVILTASEHGYGKRTAIDEFPAYSRGSQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV-EN 839
+I+++ ++RNG +V A + ++MLI+ G L+RTR E+ + R+TQGV LI + +
Sbjct: 771 VIAMQCSERNGNLVTALQLFDGDQMMLISDKGTLVRTRTDEVSVLSRNTQGVRLIRLAQE 830
Query: 840 KSKLCGVQRLC 850
+L GV+R+
Sbjct: 831 DERLVGVERIA 841
>gi|329298018|ref|ZP_08255354.1| DNA gyrase subunit A [Plautia stali symbiont]
Length = 876
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/881 (53%), Positives = 645/881 (73%), Gaps = 16/881 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MSDLAREIAPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+++VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DL+KET+DF+ NYDG E+ P VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKISSELLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + S+ L++ I PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAFIEDENISVEGLMEHITGPDFPTAAFINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + R II++E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEIETDAKTGRETIIVNEIPYQVNKARLIEKIAELVKEKRVEGISGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LKEI+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKIMTLKEIIEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR TP EAK+ ++ +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPTPAEAKSGLLAQSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEAEFGIRDGRYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL +++R++E+I +EL +++++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELIHILQSAERLMEVIREELVAMRDQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQQLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIA+NL +D LIG ALT+G+ + MLFS +GK VRF E++V
Sbjct: 652 DGTVKKTALQEFSRPRSAGIIAINLREDDELIGVALTNGNDEAMLFSAAGKVVRFAESAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGRSA GV G+RL + KV++L+V ++ ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRSASGVRGIRLAEGDKVVSLIVP-REEGAILTVTQNGYGKRTANSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVVGTVQVVDSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLVAS 881
+ G+QR+ K ++ +DG A G+ +A V S
Sbjct: 831 ENVVGLQRVAKPVEEEE------LDGSVAEGENDIAPEVDS 865
>gi|398792803|ref|ZP_10553364.1| DNA gyrase, A subunit [Pantoea sp. YR343]
gi|398212500|gb|EJM99108.1| DNA gyrase, A subunit [Pantoea sp. YR343]
Length = 879
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/881 (52%), Positives = 645/881 (73%), Gaps = 13/881 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+++VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKISSELLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + ++ L++ I PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAFIEDEDITVEGLMEHITGPDFPTAAFINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVETDAKTGRETIIVHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LK I+ F+ HR+E
Sbjct: 301 MRVVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKIMTLKGIIEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR TP EAK ++ +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPTPAEAKLGLLAQSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGNDAARPEWLEAEFGIRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL +++R++E+I +EL ++++++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLHILQSAERLMEVIREELELMRDQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIA+NL +D LIG ALT+GS + MLFS +GK VRF E +V
Sbjct: 652 SGTVKKTALQEFSRPRSAGIIAINLREDDELIGVALTNGSDEAMLFSAAGKVVRFAETAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGRSA GV G++L + KV++L+V ++ ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRSASGVRGIKLAESDKVVSLIVP-REEGAILTVTQNGYGKRTANTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTDRNGPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLVAS 881
+ G+QR+ + ++ + IDG A G+ +A V S
Sbjct: 831 ENVVGLQRVAEPVEEEE---LDAIDGSVAEGEDDIAPEVDS 868
>gi|359456188|ref|ZP_09245376.1| DNA gyrase subunit A [Pseudoalteromonas sp. BSi20495]
gi|414070333|ref|ZP_11406319.1| DNA gyrase subunit A [Pseudoalteromonas sp. Bsw20308]
gi|358046748|dbj|GAA81625.1| DNA gyrase subunit A [Pseudoalteromonas sp. BSi20495]
gi|410807250|gb|EKS13230.1| DNA gyrase subunit A [Pseudoalteromonas sp. Bsw20308]
Length = 899
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/883 (53%), Positives = 639/883 (72%), Gaps = 38/883 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DL+KET+DF+ NYDG E+ P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++ NPE +I +L+ IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLALIINPELTITELMDYIPGPDFPTAAIINGKKGIEQAYQTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRARAEIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR ++ E++LN LY QTQLQ FGMNM+AL+N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGDVGEVILNNLYAQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH+LEGL IAL NID I++IR + TP EAK + +W L +V
Sbjct: 361 VVTRRTVFDLRKARDRAHMLEGLAIALANIDPIIELIRKSPTPAEAKVALTARSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ K + +++ + ++ + Y +S+ QAQ IL + L +LT +E +KI+++
Sbjct: 421 KSML--EKAGEDNVARPDWLAADLGIRDGQYFISEQQAQAILDLRLHKLTGLEHEKILSE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L IL+ +R++E+I DEL IK +YG RR+EI A + S EDL
Sbjct: 479 YQTLLDLIAELLHILATPERLMEVIRDELVEIKAQYGDE----RRTEINAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 ITEEDVVVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ Y+FM+
Sbjct: 595 STAGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPV----REYAEDKYIFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE- 717
T+ G VKKT L+ +S R SGIIAVNL+ D LIG +TDGS +IMLF+D+GK VRF E
Sbjct: 651 TAFGTVKKTPLTAYSRQRASGIIAVNLNEGDSLIGVDITDGSNEIMLFTDAGKVVRFKEA 710
Query: 718 ------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR+A GV G+++ +Q+V++L+V +
Sbjct: 711 EETTVVDENGNPVLDEEGNPEIRFKGVRPMGRTATGVRGIKMPDEQRVVSLIVPKTDG-A 769
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LT TENGYGKRT +++Y +R T+G++SIK ++RNG VV A V+ EIM+I+ G
Sbjct: 770 ILTVTENGYGKRTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGT 829
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIK 856
L+RTRV+E+ +GR+TQGVILI ++ ++ G+QR+ +I + +
Sbjct: 830 LVRTRVNEVSTVGRNTQGVILIRTIDEEQVVGLQRIEEIEVTQ 872
>gi|407700224|ref|YP_006825011.1| DNA gyrase subunit A [Alteromonas macleodii str. 'Black Sea 11']
gi|407249371|gb|AFT78556.1| DNA gyrase subunit A [Alteromonas macleodii str. 'Black Sea 11']
Length = 904
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/894 (52%), Positives = 648/894 (72%), Gaps = 41/894 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MSDNAKEILPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG E P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDFVPNYDGTEHIPEVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G + ++ +P +I+DL+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCVALIQDPSITIDDLMTYIPGPDFPTAAMISGRKGIEDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E + + I+++E+PYQVNK L+EKI++LVKEK++E +S LRDESDK G
Sbjct: 241 YLRAKAEI-ETDSNGKETIVVNEIPYQVNKARLIEKIAELVKEKRIEGVSALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KRNE E++LN LY TQLQ FG+NM+AL NGQPK+ NLKE L FILHR+E
Sbjct: 300 MRIVIEVKRNESAEVLLNHLYANTQLQTVFGINMVALDNGQPKVFNLKETLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL IAL NID I++I+++ +P +AK ++ W+L DV
Sbjct: 360 VVTRRTVFELRKARDRAHILEGLAIALANIDPIIELIKASQSPADAKKSLVAQGWDLGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++++ G + + + I + Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 AQMLERAGDDAARPDWLMPEFGI----RDGKYYLTEQQAQAILDLRLHKLTGLEHEKILE 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++ + +L IL++ +R++E+I +EL +++++G RR+EI + + ED
Sbjct: 476 EYKQLLELIAELLHILNSPERLMEVIQEELEKVRDEFGDE----RRTEITAASHDIDIED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K Q +++Y AQ+RGGRGK A KDED+I +L +ANTHD+ILC
Sbjct: 532 LIEQEDVVVTLSREGYVKYQKLTDYEAQRRGGRGKSATKMKDEDFIERLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + +V M
Sbjct: 592 FSTRGRLYWLKVYQLPFASRNARGRPIVNILPLEENERITAILPI----KEFEEGKFVLM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS +S PR SGIIAVNL+ D LIG +T G DIMLFSD+GK VRFNE
Sbjct: 648 ATANGTVKKTDLSLYSRPRSSGIIAVNLNEGDELIGVDITHGDDDIMLFSDAGKVVRFNE 707
Query: 718 N--------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTA 757
++R MGR+A GV G+RL+ QKV++L+V +LTA
Sbjct: 708 KLRDSETGEVKRDPETGEELLALRPMGRTATGVRGIRLQDGQKVVSLIVPKGDG-PILTA 766
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
TENG+GKRT +++Y +R T+G++SIK ++RNGKVV A V+ +EIMLI+ G L+RT
Sbjct: 767 TENGFGKRTPLEDYPAKSRATQGVVSIKVSERNGKVVGAVQVDETNEIMLISDQGTLVRT 826
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYI----PVITIDGP 867
RVSE+ +GR+TQGV LI + G+QR+ ++ ++++ P+I+ D P
Sbjct: 827 RVSEVSVVGRNTQGVRLIRTVEGEHVVGLQRIEEVEELQEFDEDGNPIISDDVP 880
>gi|422013795|ref|ZP_16360413.1| DNA gyrase subunit A [Providencia burhodogranariea DSM 19968]
gi|414102307|gb|EKT63900.1| DNA gyrase subunit A [Providencia burhodogranariea DSM 19968]
Length = 866
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/851 (54%), Positives = 633/851 (74%), Gaps = 11/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET++F+ NYDG E+ P V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELLADLEKETVNFVPNYDGTEQIPEVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G L + + + SI L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVISGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ + E + + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEV-EVDEKGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILNLKDIIAAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR STP EAK +I +WNL +V
Sbjct: 360 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRKASTPAEAKAGLIAQSWNLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ N + + + + Y L++ QAQ IL + LQ+LT +E +K++ +Y
Sbjct: 420 AAMLERAGDNAARPEWLEDQFGVHDGK-YFLTEQQAQAILDLRLQKLTGLEHEKLLEEYR 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++K++ +L IL + +R++E+I +EL I++ Y + RR+EI N + + EDLI+
Sbjct: 479 DLLKQIEELLYILRSPERLMEVIREELEAIRDIY----NDARRTEITENTADINIEDLIS 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ RD+ + +VFM+T+
Sbjct: 595 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----RDYEEGYFVFMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +FS PR +GIIAVNL+ D LIG LT+GS ++MLFS GK VRF E++V
Sbjct: 651 SGTVKKTPLQDFSRPRSAGIIAVNLNEGDELIGVDLTNGSNEVMLFSAQGKVVRFAEDAV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G+RL + KV++L++ + +LT TENGYGKRT +EY +R T+G
Sbjct: 711 RAMGRTATGVRGIRLVDEDKVVSLIIPRGEGH-ILTVTENGYGKRTAEQEYPTKSRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 770 VISIKVSERNGNVVGAIQVDETDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 829
Query: 841 SKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 830 EKVVGLQRVAE 840
>gi|259907952|ref|YP_002648308.1| DNA gyrase subunit A [Erwinia pyrifoliae Ep1/96]
gi|385788867|ref|YP_005819976.1| DNA gyrase subunit A [Erwinia sp. Ejp617]
gi|387870749|ref|YP_005802120.1| DNA gyrase subunit A [Erwinia pyrifoliae DSM 12163]
gi|224963574|emb|CAX55064.1| DNA gyrase subunit A [Erwinia pyrifoliae Ep1/96]
gi|283477833|emb|CAY73749.1| DNA gyrase, A subunit [Erwinia pyrifoliae DSM 12163]
gi|310768139|gb|ADP13089.1| DNA gyrase subunit A [Erwinia sp. Ejp617]
Length = 878
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/879 (53%), Positives = 643/879 (73%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPEVMPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + ++ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIADENITVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 YIRARGEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMPLKDILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRTIFELRKAR+ AHILE L +AL NID I++IR+ TP EAK +I W L +V
Sbjct: 361 VITRRTIFELRKARDRAHILEALAVALANIDPIIELIRAAPTPAEAKAGLIARPWVLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ N + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDNAARPEWLEDQYGIRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL +S+R++E+I +EL +I++++G RR+EI N + + EDLI
Sbjct: 480 ELLTQIAELLRILGSSERLMEVIREELELIRDQFGDK----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYAEGWNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIAVNL ++D LIG +LT GS + MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTDFSRPRSAGIIAVNLRDDDELIGVSLTSGSDEAMLFSAAGKVVRFAESAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G++L + +V++L+V + +++T T+NGYGKRT EY +R T+G
Sbjct: 712 RTMGRTASGVRGIKLAEGDRVVSLIVPRDDG-AIMTVTQNGYGKRTANVEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + ++ + IDG A G +A V
Sbjct: 831 ENVVGLQRVAEPVAEEE---LDAIDGSAAEGDDEIAPEV 866
>gi|442611139|ref|ZP_21025845.1| DNA gyrase subunit A [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747067|emb|CCQ11907.1| DNA gyrase subunit A [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 893
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/879 (54%), Positives = 632/879 (71%), Gaps = 38/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+ N WN
Sbjct: 1 MSDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DL+KET+D++ NYDG E+ P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLSHELLADLEKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++ NP+ +I++LI+ IP PDFPTA II G + D Y+TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLALIQNPDLTIDELIEYIPGPDFPTAAIINGKKGIVDAYHTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YIRARAEIEVDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E++LN LY QTQ+Q FG+NM+AL N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEVKRGEVGEVLLNNLYAQTQMQTVFGINMVALDNNQPKCFNLKEMLEAFIVHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+++LRKAR+ AH LEGL IAL NID I++IR + +P EAK ++ W L V
Sbjct: 361 VVTRRTVYDLRKARDRAHTLEGLAIALANIDPIIELIRKSPSPSEAKLALVARPWELGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ K ++ + ++ + +Y LS+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 GPML--EKAGEENAARPDWLAPELGIRDGVYYLSEQQAQAILDLRLHKLTGLEHEKILAE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L ILS+ +R++E+I DEL IK YG RR+EI A + S EDL
Sbjct: 479 YQELLDLIAELLYILSSPERLMEVIRDELVEIKTTYGDG----RRTEISAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP+S+Y +Q+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 INEEDVVVTLSHEGYVKYQPLSDYESQRRGGKGKAATRMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ YV M+
Sbjct: 595 STAGRLYWLKVYQLPLASRTARGKPIVNLLPLEADERITAILPV----REYQEDKYVIMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +S R SGIIA+NL D LIG +TDGS +IMLFSD+GK VRF E
Sbjct: 651 TADGTVKKTSLIEYSRQRSSGIIAINLKEGDSLIGVDITDGSSEIMLFSDAGKVVRFKEG 710
Query: 719 -------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR+A GV G++L QKV++L+V N +
Sbjct: 711 EEIPATDEEGNPIFDENGNPEIIFKGVRPMGRTATGVRGIKLADDQKVVSLIVPKNDG-A 769
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
VLT TENGYGKRT ++EY R T+G++SIK ++RNGKVV A V EIMLI+ G
Sbjct: 770 VLTVTENGYGKRTPLEEYPVKGRATQGVVSIKVSERNGKVVGAVQVQDNDEIMLISNRGT 829
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ +GR+TQGVILI + ++ G+QR+ +I
Sbjct: 830 LVRTRVNEVSVVGRNTQGVILIRTIDGEQVVGLQRIDEI 868
>gi|253687499|ref|YP_003016689.1| DNA gyrase subunit A [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754077|gb|ACT12153.1| DNA gyrase, A subunit [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 879
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/866 (53%), Positives = 636/866 (73%), Gaps = 10/866 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + + S+ L++ I PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR +P EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPSPAEAKASLIAQAWELGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT ME +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGIRDGRYY-LTEQQAQAILDLRLQKLTGMEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL IK +Y RR+EI N+ + + EDLI
Sbjct: 480 ALLAEIAELLYILNSPERLMEVIREELEAIKTQYSDE----RRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS + MLFS GK VRF+E +V
Sbjct: 652 SGTVKKTSLTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L+ + +V++L++ + +LT T+NG+GKRT + EY +R TKG
Sbjct: 712 RSMGRTATGVRGINLQGEDRVVSLIIPRGEG-DILTVTQNGFGKRTAVNEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDG 866
+ G+QR+ + ++ V+ ++G
Sbjct: 831 ENVVGLQRVAEPVEDEELDGVVKVEG 856
>gi|409200060|ref|ZP_11228263.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
flavipulchra JG1]
Length = 890
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/874 (53%), Positives = 633/874 (72%), Gaps = 33/874 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MSDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKVAHELLADLEKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L V+ NP+ +I +LI IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAVIQNPDITIEELIDYIPGPDFPTAAIISGKNGIEQAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + N+ II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YIRAKAEIEVDEKTNKETIIVHEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQLQ FG+NM+AL N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGEVGEVVLNNLYAQTQLQTVFGINMVALDNNQPKCFNLKEMLDAFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH LEGL IAL NID I++IR + TP EAK + W+L +V
Sbjct: 361 VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKAALTARAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ + +++ + +++ + Y LS+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 KSML--ERTGEENVARPDWLAEELGIRDGQYYLSEQQAQAILDLRLHKLTGLEHEKILAE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L ILS +R++E+I DEL IK YG RR+EI A + S EDL
Sbjct: 479 YKELLDLIAELLYILSTPERLMEVIRDELVEIKETYGDE----RRTEITAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP+S+Y AQ+RGG+G+ A KDED+I +L +ANTHD ILCF
Sbjct: 535 INEEDVVVTLSHEGYVKYQPLSDYEAQRRGGKGRSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ ++ M+
Sbjct: 595 STSGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITTILPV----REYEEDKFIVMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ GIVKKT L+ +S R SGIIA+NL+ D LIGA +T G DIMLF++ GK VRFNE
Sbjct: 651 TASGIVKKTPLTAYSRQRASGIIAINLNEGDSLIGANITTGENDIMLFTEHGKVVRFNEK 710
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+++ KV++L+V ++LT T
Sbjct: 711 QRDSETGEVKRDPETGEEMLALRPMGRTATGVRGIKMPDGVKVVSLIVPQGDG-AILTVT 769
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT ++EY +R T+G++SIK +RNG VV A V+ EIMLI+ G L+RTR
Sbjct: 770 ENGYGKRTPLEEYPAKSRATQGVVSIKVTERNGSVVGAVQVDDNDEIMLISNRGTLVRTR 829
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
V+E+ +GR+TQGVILI + K+ G+QR+ +I
Sbjct: 830 VNEVSTVGRNTQGVILIRTMEEEKVVGLQRIEEI 863
>gi|149693009|emb|CAK55539.1| DNA gyrase subunit [Salmonella enterica subsp. enterica serovar
Typhi]
gi|149693015|emb|CAK55542.1| DNA gyrase subunit [Salmonella enterica subsp. enterica serovar
Typhi]
Length = 878
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/851 (53%), Positives = 634/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDFAVYGTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ L+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHGLMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QENVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|88810645|ref|ZP_01125902.1| DNA gyrase, A subunit [Nitrococcus mobilis Nb-231]
gi|88792275|gb|EAR23385.1| DNA gyrase, A subunit [Nitrococcus mobilis Nb-231]
Length = 852
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/851 (53%), Positives = 625/851 (73%), Gaps = 14/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE++ + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E++N WN
Sbjct: 1 MSSVAKEILPVNLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ F++R L+DGQGNFGS+DGD+AAAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDAAVYDTIVRMAQVFAMRYPLIDGQGNFGSVDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I+++LL DLDKET+DF+ NYDG E+EP+VLPTRIPN L+NG SGIAVGMAT
Sbjct: 121 RYTEIRMARIAHDLLADLDKETVDFVDNYDGSEQEPTVLPTRIPNFLVNGGSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
N+PPHNL EVID + ++ + ++++L+ +P PD PTA II G++ + + Y TG+GR+
Sbjct: 181 NVPPHNLGEVIDACMALIDDDSLTVDELMTYLPGPDLPTAAIINGVAGIREAYRTGRGRM 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA+ EE R + ++I+ ELPYQVNK LLEKI+ LVKEK++E I+ LRDESDK G
Sbjct: 241 VIRARCEFEEEARSGKVSLIVTELPYQVNKARLLEKIAGLVKEKRIEGITELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E+PE+VLN LY+ TQL++ G+NM+AL GQPKL +L+++L F+ HR+E
Sbjct: 301 IRVVIELRRGEVPEVVLNNLYQHTQLESVVGINMVALAKGQPKLHSLRDVLDAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID I +I+++ P +AK ++ +W P
Sbjct: 361 VVTRRTVYELRKARERTHVLEGLAVALANIDEVIALIKASPGPAQAKAALLTRSW--PPG 418
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S I ++ +SK + Y+LS+ QAQ IL + LQRLT +EQ KII +
Sbjct: 419 SGITEMLQRAGAEVSKPEGLDASLGLVGAAYRLSETQAQAILDLRLQRLTGLEQNKIIEE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y +++ + +L IL + R++ +I +EL IK Y + RR+EI N ++ + EDL
Sbjct: 479 YRDLLGSINELLAILGSGDRLMAVIREELLAIKEHYA----DPRRTEITANRVDLTLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY KSQP+ Y+AQ RGG+GK A KDED+I+QLF+ANTHD +LCF
Sbjct: 535 IQPEDVVVTLSHGGYAKSQPLDSYQAQHRGGKGKAATKMKDEDFIDQLFLANTHDTLLCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G+ YWLKV+++P GSR SRGKPI+N+ L E+I+ ++ + ++F ++VFM+
Sbjct: 595 SSHGKCYWLKVYELPHGSRGSRGKPIVNLLPLDPAERISAVVSI----KEFDDQHFVFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS+FS PR SGIIAVNL +D+L+ +TDG +IML +D+GKA+RF E+
Sbjct: 651 TRKGTVKKTPLSDFSRPRSSGIIAVNLQEDDWLVNVGITDGEREIMLLTDAGKAIRFPED 710
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
+VR MGR+A GV G++L Q VI LL+ + +LTATENGYGKRT + EY + +RG
Sbjct: 711 AVRPMGRTAGGVRGIQLGTGQSVIQLLILG--EGDILTATENGYGKRTPVAEYPRRSRGG 768
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+ISI+T++RNG VV A V EIMLIT G L+R V+EI + R+TQGV LI +
Sbjct: 769 RGVISIQTSERNGNVVGAAQVTEEDEIMLITNAGTLVRIPVAEISIVSRNTQGVKLIALG 828
Query: 839 NKSKLCGVQRL 849
+ +L GV R+
Sbjct: 829 GEERLAGVARI 839
Score = 47.0 bits (110), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANT--HDYI 595
LI + ++T + GY K P++EY + RGGRG ++ T + + N + A D I
Sbjct: 737 LILGEGDILTATENGYGKRTPVAEYPRRSRGGRGVISIQTSERNG-NVVGAAQVTEEDEI 795
Query: 596 LCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRD 648
+ +N G L + V +I SRN++G +I + + + I PL++ D
Sbjct: 796 MLITNAGTLVRIPVAEISIVSRNTQGVKLIALGGEERLAGVARIEPLNDTVED 848
>gi|188026161|ref|ZP_02961100.2| hypothetical protein PROSTU_03092 [Providencia stuartii ATCC 25827]
gi|188021857|gb|EDU59897.1| DNA gyrase, A subunit [Providencia stuartii ATCC 25827]
Length = 873
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/851 (54%), Positives = 628/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 7 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 66
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 67 KPYKKSARIVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 126
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 127 RYTEIRMAKIAHEMLADLEKETVDFVPNYDGTEQIPEVMPTKIPNLLVNGSSGIAVGMAT 186
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G L + + + SI L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 187 NIPPHNLGEVISGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKV 246
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 247 YIRARAEVEVDEKNGRETIIVSEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 306
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+LNLK+I+ F+ HR+E
Sbjct: 307 MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILNLKDIIAAFVRHRRE 366
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L +AL NID I++IR TP EAK +I W+L +V
Sbjct: 367 VVTRRTIFELRKARERAHILEALAVALANIDPIIELIRRAPTPAEAKAGLIARPWDLGNV 426
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + + Y L++ QAQ IL + LQ+LT +E +K++ +Y
Sbjct: 427 AAMLERAGDDAARPEWLEEQYGVHDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLEEYR 485
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++K++ +L IL + +R++E+I +EL I+ Y + RR+EI N + + EDLI+
Sbjct: 486 DLLKQIEELLYILRSPERLMEVIREELEAIRELY----NDARRTEITENTADINIEDLIS 541
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 542 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSS 601
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + YVFM+T+
Sbjct: 602 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----REYEEGYYVFMATA 657
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +FS PR +GIIAVNL+ D LIG LT+GS ++MLFS GK VRF E++V
Sbjct: 658 SGTVKKTALQDFSRPRSAGIIAVNLNEGDELIGVDLTNGSNEVMLFSAQGKVVRFAEDAV 717
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+RL + KV++L++ + +LT TENGYGKRT +EY +R T+G
Sbjct: 718 RPMGRTATGVRGIRLADEDKVVSLIIPRGEGH-ILTVTENGYGKRTAEQEYPTKSRATQG 776
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI +
Sbjct: 777 VISIKVSERNGNVVGAIQVDETDQIMMITNAGTLVRTRVSEVSVVGRNTQGVTLIRTAEE 836
Query: 841 SKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 837 EKVVGLQRVAE 847
>gi|343493787|ref|ZP_08732082.1| DNA gyrase subunit A [Vibrio nigripulchritudo ATCC 27043]
gi|342825766|gb|EGU60232.1| DNA gyrase subunit A [Vibrio nigripulchritudo ATCC 27043]
Length = 871
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/855 (53%), Positives = 636/855 (74%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIEGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E ++ + I++ E+PYQVNK L+EK+++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EADKNGKETIVVTEIPYQVNKARLIEKVAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKAR+ AHILEGL +AL NID I++IR+ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIYELRKARDRAHILEGLALALANIDEIIELIRNAPTPAEAKAGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + I + Q Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPDWLEEQYGIREGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ +G + RR+EI + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELEAVRDGFG----DTRRTEITAAVHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+PQ SRN+RGKPI+N+ L+ E+IT ILP+S ++ + Y+FM
Sbjct: 592 FSTRGKTYRLKVYQLPQASRNARGKPIVNILPLEEGERITAILPVS----EYSADKYIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +TDG DIMLFS GK VRF+E
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIAVNLRDDDSLIGVDITDGDSDIMLFSKEGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLAENDQVVSLIVPSNEG-DILTVTQNGYGKRTPLAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A E M+IT G L+RTRVSE+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGCVVGAVQTEENDEFMMITDAGTLVRTRVSEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ ++
Sbjct: 827 AEDENVVGLQRIDEV 841
>gi|389736344|ref|ZP_10189904.1| DNA gyrase subunit A [Rhodanobacter sp. 115]
gi|388439481|gb|EIL96036.1| DNA gyrase subunit A [Rhodanobacter sp. 115]
Length = 880
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/851 (54%), Positives = 632/851 (74%), Gaps = 16/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKEVI + +E+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MAELAKEVIRVNIEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNAWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD S+YDA+VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDASVYDAIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ELL D+DK+T+DF NYD E+EP VLP R+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMSKLTHELLADIDKDTVDFGFNYDESEREPLVLPARVPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI + ++ P SI+DL++ +P PDFPT GII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLNEVISATIALIDEPALSIDDLMQHVPGPDFPTCGIINGAAGIVEAYRTGRGRI 240
Query: 241 IIRAKTHIE-EFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
++RAK IE E N R I+I ELPYQVNK L+EKI++LVKEK+LE IS LRDESDK
Sbjct: 241 LVRAKAEIETEPN--GRETILIHELPYQVNKARLIEKIAELVKEKRLEGISELRDESDKD 298
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIE++++ + ++VLN L++QTQLQ TFG+NM+ALV+GQP+LLNLKEIL FI HR+
Sbjct: 299 GMRVVIEIRKDAMADVVLNNLFQQTQLQVTFGINMVALVDGQPRLLNLKEILEAFIRHRR 358
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRTIFELRKAR AHILEGLT+AL NID I++I+++++P EA+ +++ W
Sbjct: 359 EVVTRRTIFELRKARARAHILEGLTVALANIDEMIELIKTSASPAEARERMLARKWQPGM 418
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++G + ++ + L+ D Y+LSD+QAQEIL M L RLT +EQ+K+ ++Y
Sbjct: 419 VGALLGAAGAESSRPEDMDPRAGLK-ADGYQLSDVQAQEILAMRLHRLTGLEQEKLSDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDL 538
+++ + L +IL N R++E+I +EL IK +YG ++ I+ S+ LN + DL
Sbjct: 478 RQILEIIRGLIEILENPDRLLEVIREELEAIKTEYGDGRRTEIQHSQEDLNVL-----DL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+TLS+ GY+K QP S YRAQKRGG+G+ A KDED + QL++ NTHD +L F
Sbjct: 533 IAPEDVVVTLSHTGYVKRQPASTYRAQKRGGKGRSASALKDEDVVEQLWVVNTHDTLLAF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
++ GR+YWLKV+Q+P+ +RGKP++N+ L EK+ +LP+ R++ ++ YVF +
Sbjct: 593 TSVGRIYWLKVYQMPEAGPGARGKPMVNLLPLGEGEKVQAVLPI----REYSEDRYVFFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT L+ F+ + G IA+ L D L+ LTDG+ DI+LF+ +GK RF+EN
Sbjct: 649 TRHGTVKKTPLTEFAFQLQKGKIAIKLDEGDALVDVELTDGNSDILLFASNGKVNRFDEN 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
+VR+MGR+A GV GM+L +V++L+V+ + +LTATE GYGKRT++ E+ K RGT
Sbjct: 709 TVRSMGRTATGVRGMKLADDAEVVSLIVA--AQGDILTATERGYGKRTVLDEFPKKGRGT 766
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I I+ ++RNG +VAA V+ HE+MLI+ G L+RTRV+E+ ++ R+TQGV LI +
Sbjct: 767 QGVIGIQCSERNGPLVAAVQVDETHELMLISNQGTLVRTRVAEVSQLSRNTQGVTLIRLP 826
Query: 839 NKSKLCGVQRL 849
L V RL
Sbjct: 827 ADESLVSVVRL 837
>gi|149189884|ref|ZP_01868163.1| DNA gyrase, subunit A [Vibrio shilonii AK1]
gi|148836199|gb|EDL53157.1| DNA gyrase, subunit A [Vibrio shilonii AK1]
Length = 885
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/849 (54%), Positives = 632/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N + +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLNEVIDGCLAYIKNEDITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IEE ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIEE-DKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYSQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L++AL NID I++I++ TP EAK ++ W L V
Sbjct: 360 VVTRRTIFELRKARDRAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWELGSV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ +Y L++ QAQ IL++ L RLT +E +KI+++Y+
Sbjct: 420 ASMLERAGTDAARPDWLEDQYGIRDG-LYYLTEQQAQAILELRLHRLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL++++R++E+IT+EL +++ YG RRSEI + E+LIA
Sbjct: 479 ALLEEIAELMHILASTERLMEVITEELELVQATYGDE----RRSEITAAVHDIDMEELIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS
Sbjct: 535 REDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILCFST 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+S +F ++FM+T
Sbjct: 595 RGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILPVS----EFSPEKFIFMATG 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FSN R +G+IAVNL ++D LIG +TDG DIMLFS GK VRF+E+ V
Sbjct: 651 DGTVKKTSLDQFSNVRANGLIAVNLRDDDSLIGVDITDGQSDIMLFSKQGKVVRFSEDKV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV GM+L + +V++L+V +NQ +LT T+NGYGKRT ++EY R T+G
Sbjct: 711 RAMGRTAAGVRGMKLADEDQVVSLIVPSNQG-DILTVTQNGYGKRTELEEYPTKGRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI +
Sbjct: 770 VVSIKVSERNGPVVGAIQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTASD 829
Query: 841 SKLCGVQRL 849
+ G+QR+
Sbjct: 830 ESVVGLQRI 838
>gi|403057575|ref|YP_006645792.1| DNA gyrase subunit A [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804901|gb|AFR02539.1| DNA gyrase subunit A [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 879
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/866 (53%), Positives = 635/866 (73%), Gaps = 10/866 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + + ++ L++ I PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCLAYIDDENITLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR +P EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPSPAEAKASLIAQAWELGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT ME +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGIRDGRYY-LTEQQAQAILDLRLQKLTGMEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL IK +Y RR+EI N + + EDLI
Sbjct: 480 ALLAEIAELLYILNSPERLMEVIREELEAIKTQYSDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS + MLFS GK VRF+E +V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L+ + +V++L++ + +LT T+NG+GKRT + EY +R TKG
Sbjct: 712 RSMGRTATGVRGINLQGEDRVVSLIIPRGEG-DILTVTQNGFGKRTAVSEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDG 866
+ G+QR+ + ++ V+ ++G
Sbjct: 831 EHVVGLQRVAEPVEDEELDGVVKVEG 856
>gi|304413453|ref|ZP_07394926.1| DNA gyrase A subunit [Candidatus Regiella insecticola LSR1]
gi|304284296|gb|EFL92689.1| DNA gyrase A subunit [Candidatus Regiella insecticola LSR1]
Length = 866
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/859 (54%), Positives = 634/859 (73%), Gaps = 18/859 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAREITPVNIEAELKGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGDS AAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELLADLDKETVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + S+ L++ IP PDFPT II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVIEGCLAYIDDENISVEALMRHIPGPDFPTGAIINGGRGIAEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ + + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YLRARAEVVIDAKTQRETIIVHEIPYQVNKAKLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPK+L LKEIL F+ HR+E
Sbjct: 301 MRVVIEIKRDAVGEVVLNNLYSLTQLQITFGINMVALHAGQPKILPLKEILQSFVSHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILE L +AL +ID I++IR T +AKN ++E+ W L DV
Sbjct: 361 VVTRRTMFELRKARDRAHILEALVVALAHIDTIIELIRHAPTAADAKNGLMENAWPLSDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQ--------NNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+++ + + TI + N ++ + +++ Y L++ QAQ IL + LQ+LT ME
Sbjct: 421 DEMLKRSSGDQITIGR-NEDARPEWLEKEFGIHDESYHLTEQQAQAILDLRLQKLTGMEH 479
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
K++++Y++++ K+++L IL +R++EII DELN IK +Y K+ RR+ II+N +
Sbjct: 480 DKLLDEYKDLLIKIVELISILKTPERLMEIIKDELNAIKEQY----KDPRRTNIIVNNLE 535
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+ EDLI +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K ED+I+QL +ANTH
Sbjct: 536 INNEDLINQEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKGEDFIDQLLVANTH 595
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D ILCFS+ G LYW+KV+Q+P+ SR +RG+PIIN+ LK E+IT ILP+ R++
Sbjct: 596 DTILCFSSKGSLYWMKVYQLPEASRGARGRPIINLLPLKENERITAILPV----REYDAG 651
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
++VFM+T+ GIVKKT L FS PRK GIIA+NL+ D LIG ALTDGS ++MLFS GKA
Sbjct: 652 HHVFMATACGIVKKTALDCFSRPRKDGIIAINLNEGDELIGVALTDGSNEVMLFSTDGKA 711
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
VRF+E+ VR++GR A G+ G++L ++++L++ + + +LT T+NGYGKRTL +EY
Sbjct: 712 VRFSESKVRSVGRKAAGMRGIKLNDDDRLVSLIIPQKEGE-ILTITKNGYGKRTLAEEYP 770
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
R TKG++SIKT++RNG VVAA V +IM+IT G L+RTRVSEI GR+TQGV
Sbjct: 771 TKGRATKGVLSIKTSERNGNVVAAIQVMTSDQIMIITDAGTLVRTRVSEINVQGRNTQGV 830
Query: 833 ILITVENKSKLCGVQRLCK 851
LI + G+QR+ +
Sbjct: 831 RLIRTAKNEHVVGLQRVAE 849
>gi|253989038|ref|YP_003040394.1| dna gyrase subunit a [Photorhabdus asymbiotica]
gi|253780488|emb|CAQ83650.1| dna gyrase subunit a [Photorhabdus asymbiotica]
Length = 879
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/851 (54%), Positives = 624/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 4 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 63
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 64 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 123
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYDG E+ P V+P ++PNLLINGSSGIAVGMAT
Sbjct: 124 RYTEVRMAKIAHELLADLEKETVDFVPNYDGTEQIPEVMPAKVPNLLINGSSGIAVGMAT 183
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 184 NIPPHNLSEVIDGCLAYIDDENISIEGLMQFIPGPDFPTAAIINGRRGIQEAYRTGRGKI 243
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + R I++ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 244 YIRARAEIEVDEKNGRETILVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 303
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPKLLNLK+I+ F+ HR+E
Sbjct: 304 MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKLLNLKDIISAFVCHRRE 363
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L +AL NID I++IR TP EAK ++ W L +V
Sbjct: 364 VVTRRTIFELRKARERAHILEALAVALANIDPIIELIRHAPTPAEAKAALVAQPWELGNV 423
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + + Y L++ QAQ IL + LQ+LT +E +K++++Y
Sbjct: 424 ASMLERAGDDAARPEWLESQYGVHEGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYR 482
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL + +R++E+I +EL IK +Y + RR+E+ N + + EDLI
Sbjct: 483 ELLTLIGELLFILESPERLMEVIREELLAIKAQY----NDARRTELTENTADINIEDLIN 538
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 539 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIEKLLVANTHDTILCFSS 598
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR++RG+PIIN+ L+ E+IT ILP+ R++ YVFM+T+
Sbjct: 599 RGRLYWMKVYQLPEASRSARGRPIINLLPLEQDERITAILPV----REYEDGLYVFMATA 654
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +FS PR +GI+AVNL++ D LIG LTDGS ++MLFS GK VRF E++V
Sbjct: 655 SGTVKKTALQDFSRPRSAGILAVNLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFEEDAV 714
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L K KV++L++ + + +LT TENGYGKRT EY +R T+G
Sbjct: 715 RAMGRTATGVRGIKLNGKDKVVSLIIPRGEGE-ILTVTENGYGKRTAENEYPIKSRATQG 773
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 774 VISIKVSERNGNVVGAIQVEPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 833
Query: 841 SKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 834 EKVVGLQRVAE 844
>gi|322832014|ref|YP_004212041.1| DNA gyrase subunit A [Rahnella sp. Y9602]
gi|384257120|ref|YP_005401054.1| DNA gyrase subunit A [Rahnella aquatilis HX2]
gi|321167215|gb|ADW72914.1| DNA gyrase, A subunit [Rahnella sp. Y9602]
gi|380753096|gb|AFE57487.1| DNA gyrase subunit A [Rahnella aquatilis HX2]
Length = 883
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/851 (54%), Positives = 630/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ PSV+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPSVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIEDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+L LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKILGLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR+ TP EAK ++ +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRAAPTPAEAKAGLVARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + + + Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLASAGDDAARPEWLEPQFGIHDGK-YFLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L ILSN R++E+I +EL I+++Y + RR+EI N + + EDLI
Sbjct: 480 ELLVQIAELLFILSNPDRLMEVIREELEAIRDQY----NDPRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD IL FS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILMFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIA+NL+ D LIG LTDG ++MLFS +GK VRF+E +V
Sbjct: 652 SGTVKKTALTDFSRPRSAGIIAINLNEGDELIGVDLTDGKDEVMLFSAAGKVVRFSEEAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+RL + V++L++ +LT T+NG+GKRT EY +R T+G
Sbjct: 712 RSMGRTATGVRGIRLGEGDSVVSLIIPRGDG-CILTVTQNGFGKRTESTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG V+ A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI +
Sbjct: 771 VISIKVSERNGPVIGAIQVDEADQIMMITDAGTLVRTRVSEVSTVGRNTQGVTLIRTADD 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|149377385|ref|ZP_01895129.1| DNA gyrase, A subunit [Marinobacter algicola DG893]
gi|149358309|gb|EDM46787.1| DNA gyrase, A subunit [Marinobacter algicola DG893]
Length = 859
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/852 (53%), Positives = 638/852 (74%), Gaps = 11/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYPLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL DLDKET+DF++NYDG E+ P VLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKIAHSLLADLDKETVDFVANYDGTEQIPDVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ NP+ +I+DL++ IP PDFPT GII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEIVNGCLALIDNPDMTIDDLMEHIPGPDFPTQGIINGRAGIVEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + NR AIII ELPYQ+NK L+EKI++LVKEK+LE IS LRDES+K G
Sbjct: 241 YIRARHEIEHDKKTNRDAIIITELPYQLNKARLIEKIAELVKEKRLEGISELRDESNKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E P++V+N L+ TQLQ FG+NM+AL+NG+PK+LNLKE+L F+ HR+E
Sbjct: 301 IRVVIELRRGENPDVVINNLFAHTQLQTVFGINMVALINGEPKILNLKEMLDAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE HILEGLT+AL NID I +I+++ EAK K++ W DV
Sbjct: 361 VVTRRTIYELRKARERGHILEGLTVALANIDEIIALIKASPAAAEAKEKLMAQGWAPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ ++ + I L+N +Y LS QAQ IL + L RLT +E +K+ N+Y+
Sbjct: 421 LAMLERAGEDACRPDDLPEIFGLRNG-LYHLSPEQAQAILDLRLHRLTGLETEKLQNEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++++K+ DL +IL + R++++I +EL + +++G + R +EI + + + DLI
Sbjct: 480 DILEKIADLLEILGDPDRLMQVIREELEAVVSEFGDN----RLTEITSSKRDLTIADLID 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+T+S+ GY K+Q + +Y+AQ+RGGRGK A KDED++ +L +AN+HD ILCFSN
Sbjct: 536 EEDLVVTISHGGYAKTQAVEDYQAQRRGGRGKAATSMKDEDFVEKLLVANSHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWL+V++IP+ SR SRG+P++N+ L+ E+IT LP+ RD+P++ YV M+TS
Sbjct: 596 RGKVYWLRVFEIPRASRASRGRPMVNILPLEEGERITTFLPV----RDYPEDQYVLMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L NFS PR +G+IA++L D LIG A+T G ++MLFS +GKAVRFNE +V
Sbjct: 652 AGVVKKTPLPNFSRPRSNGLIALSLDEGDTLIGTAITKGDAEVMLFSSAGKAVRFNEEAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R M R+ARGV G+R+ + V++L++ + +LTA+ENGYGKRT E+ ++RG++G
Sbjct: 712 RPMSRTARGVRGIRMPEGHHVVSLIIP-QEDAVLLTASENGYGKRTTFDEFPTYSRGSQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV-EN 839
+I+++ ++RNG +V A + E+MLI+ G L+RTR E+ + R+TQGV LI + +
Sbjct: 771 VIAMQCSERNGNLVTALQLFEGDEMMLISDKGTLVRTRTDEVSVLSRNTQGVRLIKLSQE 830
Query: 840 KSKLCGVQRLCK 851
+L GV+R+ +
Sbjct: 831 DERLVGVERIAE 842
>gi|386307707|ref|YP_006003763.1| DNA gyrase subunit A [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418241002|ref|ZP_12867536.1| DNA gyrase subunit A [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433548338|ref|ZP_20504388.1| DNA gyrase subunit A [Yersinia enterocolitica IP 10393]
gi|318606419|emb|CBY27917.1| DNA gyrase subunit A [Yersinia enterocolitica subsp. palearctica
Y11]
gi|351779647|gb|EHB21750.1| DNA gyrase subunit A [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431790898|emb|CCO67428.1| DNA gyrase subunit A [Yersinia enterocolitica IP 10393]
Length = 885
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/851 (54%), Positives = 628/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T+DF+ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + +I L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLSEVIDGCLAYIEDENITIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+ L GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVGLSQGQPKLLNLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR +TP EAK +I S W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIASPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGGDAARPEWLEAEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N +R++E+I +EL IK Y + RR+EI N + + EDLI
Sbjct: 480 ELLTVIAELIFILENPERLMEVIREELVAIKELY----NDARRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDG+ ++MLFS GK VRF E+ V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGTNEVMLFSALGKVVRFPESQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L +VI+L++ + +LT TENGYGKRT ++EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGDDRVISLIIPRGDGE-ILTVTENGYGKRTAVEEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTTED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|157371506|ref|YP_001479495.1| DNA gyrase subunit A [Serratia proteamaculans 568]
gi|157323270|gb|ABV42367.1| DNA gyrase, A subunit [Serratia proteamaculans 568]
Length = 882
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/851 (54%), Positives = 627/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P+V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEVINGCLAYIDDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YLRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALHQGQPKLLNLKDILQAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIEMIRRAPTPAEAKAALVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGIRDGK-YHLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + L IL N R++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTAIAALIFILENPDRLMEVIREELVAIKEQY----NDGRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIAVNL+ D LIG LTDGS ++MLFS +GK VRF E V
Sbjct: 652 SGTVKKTALTDFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + VI+L+V + +LT T+NGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLGEGDSVISLIVPRGEG-DILTVTQNGYGKRTAVTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG+VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGQVVGAVQVDTTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|170726654|ref|YP_001760680.1| DNA gyrase subunit A [Shewanella woodyi ATCC 51908]
gi|169812001|gb|ACA86585.1| DNA gyrase, A subunit [Shewanella woodyi ATCC 51908]
Length = 905
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/872 (53%), Positives = 631/872 (72%), Gaps = 31/872 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R TL+DGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYTLIDGQGNFGSVDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+D++ NYDG E P+VLPTRIP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKVAHQLLADLEKETVDYVPNYDGTEFIPAVLPTRIPTLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+ G L ++ NP+ +IN+L++ IP PDFPTAGII G + D Y+TG+GR
Sbjct: 181 NIPPHNLNEVVSGCLALIENPDLTINELMEYIPGPDFPTAGIINGRKGIIDAYHTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK + E R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 VMRAKAEV-EIEDNGRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR E+ E+VLN LY QTQ+Q++FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVVEIKRGEVGEVVLNNLYAQTQMQSSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L IAL NID I +I+++ TP EAK K++ W L +V
Sbjct: 360 VVTRRTVFELRKARERAHILESLAIALANIDPIIALIKASPTPAEAKVKLVAEGWELGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + +++ Y L++ QAQ IL + L +LT +E +KI+ +YE
Sbjct: 420 QSMLEKAGDDAARPEWLEPEYGIRDGRYY-LTEQQAQAILDLRLHKLTGLEHEKILKEYE 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + L IL +S R++E+IT+EL + +G RR+ I N ++ S EDLI
Sbjct: 479 ELLEIIAALLYILRSSVRLMEVITEELQEVLENFGDE----RRTVINANEVDMSLEDLIN 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+LGY K Q +++Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCFS+
Sbjct: 535 EEDVVVTLSHLGYAKYQALTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSD 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G++YWLKV+Q+P SR +RG+PI+N+ L E+IT ILP+ R++ ++ Y+ M+TS
Sbjct: 595 FGKMYWLKVYQLPLASRTARGRPIVNILPLSEGERITAILPV----REYAEDKYIIMATS 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT L+ +SNPR +GIIAVNL + D LIG +TDGS DIMLFS+ GK VRFNE
Sbjct: 651 HGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITDGSNDIMLFSNEGKVVRFNEKAR 710
Query: 719 ------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATEN 760
++RAMGR+A GV G++LE Q+V++L+V + +LT TEN
Sbjct: 711 NSETGEVKLDPETGEEMIALRAMGRTATGVRGIKLEDGQQVVSLIVPKGEG-DILTVTEN 769
Query: 761 GYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVS 820
G+GKRT + EY +RGTKG++SIK ++RNG VV A V EIMLI+ G L+RT +
Sbjct: 770 GFGKRTDLAEYPAKSRGTKGVVSIKVSERNGAVVGAVQVGENDEIMLISNKGTLVRTPAT 829
Query: 821 EIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ +GR+TQGV +I K+ G+QR+ +I
Sbjct: 830 GVSSIGRNTQGVTIIRTAEDEKVVGLQRIDEI 861
>gi|78485535|ref|YP_391460.1| DNA gyrase subunit A [Thiomicrospira crunogena XCL-2]
gi|78363821|gb|ABB41786.1| DNA gyrase subunit A [Thiomicrospira crunogena XCL-2]
Length = 871
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/865 (53%), Positives = 635/865 (73%), Gaps = 13/865 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FA+E++ I LE+EM +SYL YAMSVIVGRALPDVRDGLKPVHRRVL+AM+E+ N WN
Sbjct: 1 MSDFAREILPISLEDEMQQSYLSYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELGNSWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDS AAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET++F NYDG E EP VLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVNFTPNYDGSESEPDVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E + + ++ NPE +I++L++ +P PDFPT GII G + + Y TG+GRV
Sbjct: 181 NIPPHNLNETVSACIALIDNPELTISELMEFLPGPDFPTYGIINGTKGIREAYETGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+T +E ++ +++II+ E+PYQVNK L+E+I++LVKEKK+E IS LRDESDK G
Sbjct: 241 QMRARTSVET-DKNGKSSIIVHEIPYQVNKAKLIERIAELVKEKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+PE+++N LYKQT +Q FG+NM+AL+N QPKLLNLK++L FI HR+E
Sbjct: 300 MRIVIEVKRGEVPEVLINNLYKQTTMQTVFGINMVALINSQPKLLNLKDVLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI++LRKARE AHILEGL +AL NID I++I+++ +P AK +++E W++ +V
Sbjct: 360 VVTRRTIYDLRKAREKAHILEGLALALNNIDEMIELIKASPSPSVAKERMLERDWSIGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++ + + + +YKLS QAQ IL+M L RLT +EQ KII +Y
Sbjct: 420 EQLLEKVEMKDVRPEDLPEGFGADGSGVYKLSPAQAQAILEMRLHRLTGLEQDKIIAEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ K+ + +IL N R+ E++ +EL + +G RR+EI + + EDLIA
Sbjct: 480 DLVLKIAEFLEILRNPDRLTEVVREELQEVVENFGDK----RRTEIDHSYQDIDAEDLIA 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
++ ++TLS GYIK+QP+S+Y+AQ+RGGRGK A K++D I Q+ +A+THD +LCFSN
Sbjct: 536 VENRIVTLSRDGYIKTQPLSDYQAQRRGGRGKSATQMKEDDEIGQMIVASTHDMLLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+LYW K WQ+P SR S+GKPI+N+ L+ E IT ILP+S +F + YVFM+T
Sbjct: 596 RGKLYWQKTWQLPLASRGSKGKPIVNVLPLETGEHITSILPVS----EFSEGYYVFMATK 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
VK+ LS+FS PR +GIIAV+L ++D L+G A+TDG DIMLFS+ GKA+RF+EN V
Sbjct: 652 QSTVKRVALSDFSRPRANGIIAVDLLDDDELVGTAITDGEQDIMLFSNIGKAIRFDENDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR ARGV GM+L+ +I++ V+ + +LTATE+GYGK T + +Y+ NRG +G
Sbjct: 712 RVMGRQARGVRGMKLKDGMSIISMQVA-RKDTLILTATEHGYGKCTPVDDYSTINRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIKT+ RNG VV + V E++LIT G L+RTRVSEI +GR+TQGV LI V
Sbjct: 771 VISIKTSDRNGNVVYSVAVTPDQEVVLITNKGTLVRTRVSEISVVGRNTQGVKLINVGKG 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITID 865
+ G L + + + +P I I+
Sbjct: 831 EIVVG---LAVVDVQEDELPDIDIE 852
>gi|148978903|ref|ZP_01815223.1| DNA gyrase, subunit A [Vibrionales bacterium SWAT-3]
gi|145962101|gb|EDK27387.1| DNA gyrase, subunit A [Vibrionales bacterium SWAT-3]
Length = 880
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/852 (54%), Positives = 632/852 (74%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L +++N E +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVVDGCLALINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADIEA-DKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILE L++AL NID I++IR+ TP +AK ++ W+L +V
Sbjct: 360 VVTRRTIFELKKARDRAHILEALSLALANIDEIIELIRNAPTPADAKAGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPDWLEDQYGIRDGQ----YFLTETQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL ++ YG RR+EI + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELEAVREIYGDE----RRTEITAAVHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLSN GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSNAGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+S +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILPVS----EFSNEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +T+G DIMLFS SGK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIAVNLRDDDSLIGVDITNGDSDIMLFSKSGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTASGVRGMKLPEDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ + G+QR+
Sbjct: 827 SDDENVVGLQRI 838
>gi|260778824|ref|ZP_05887716.1| DNA gyrase subunit A [Vibrio coralliilyticus ATCC BAA-450]
gi|260604988|gb|EEX31283.1| DNA gyrase subunit A [Vibrio coralliilyticus ATCC BAA-450]
Length = 880
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/855 (54%), Positives = 631/855 (73%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + I++ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIEA-DKNGKETIVVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAPTPAEAKEGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + LQ+LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQFGIRDGQ----YFLTEQQAQAILDLRLQKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ +G + RR+EI + E+
Sbjct: 476 EYKQLLEEIAELMHILASTERLMEVIREELEAVRDGFG----DARRTEITAAIHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+PQ SR +RGKPI+N+ L+ E+IT ILP+S +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPQASRTARGKPIVNILPLEENERITAILPVS----EFSPEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL +D LIG +TDG DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIAVNLREDDSLIGVDITDGDSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLADDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGSVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ ++
Sbjct: 827 AEDENVVGLQRIDEV 841
>gi|440231686|ref|YP_007345479.1| DNA gyrase subunit A [Serratia marcescens FGI94]
gi|440053391|gb|AGB83294.1| DNA gyrase subunit A [Serratia marcescens FGI94]
Length = 873
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/851 (53%), Positives = 630/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P+V+PT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGSEQMPAVMPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEVINGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKM 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE++R+ + E+VLN LY QTQ+Q TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEVRRDAVGEVVLNHLYAQTQMQVTFGINMVALHQGQPKLLNLKDILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L +AL NID I++IR TP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARERAHILEALAVALANIDPIIELIRQAPTPAEAKAGLVAKPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 ASMLERAGDDAARPEWLEPEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL + +R++E+I +EL I++++G RR+EI N+ + + EDLI
Sbjct: 480 ELLNVIAELIFILESPERLMEVIREELVAIRDQFGDE----RRTEITANSSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS +GK VRF E+ V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPESQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + V++L+V + +LT T+NGYGKRT + EY +R T G
Sbjct: 712 RSMGRTATGVRGINLGEGDSVVSLIVPRGEG-DILTVTQNGYGKRTAVTEYPTKSRATLG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG+VV A V +IM+IT G L+RTRV+E+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGQVVGAVQVETTDQIMMITDAGTLVRTRVAEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|282600302|ref|ZP_05973771.2| DNA gyrase, A subunit [Providencia rustigianii DSM 4541]
gi|282565780|gb|EFB71315.1| DNA gyrase, A subunit [Providencia rustigianii DSM 4541]
Length = 874
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/851 (54%), Positives = 627/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 7 MSEIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 66
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 67 KPYKKSARIVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 126
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DL+KET+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 127 RYTEIRMAKIAHEMLADLEKETVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 186
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + + SI L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 187 NIPPHNLGEVINGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKV 246
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 247 YIRARAEVEVDEKNGRETIIVSEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 306
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+LNLK+I+ F+ HR+E
Sbjct: 307 MRIVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILNLKDIIAAFVRHRRE 366
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I +W L V
Sbjct: 367 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRKAPTPAEAKAGLISRSWALGTV 426
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + N + Y L++ QAQ IL + LQ+LT +E +K++ +Y
Sbjct: 427 AAMLERAGDDAARPEWLEPQYGVHNGE-YFLTEQQAQAILDLRLQKLTGLEHEKLLEEYR 485
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++K++ +L IL + R++E+I +EL I+N Y + RR+EI N + + EDLI
Sbjct: 486 DLLKQIEELLFILRSPDRLMEVIREELEAIRNVY----NDARRTEITENTADINIEDLIN 541
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 542 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSS 601
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + YVFM+T+
Sbjct: 602 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----REYEEGYYVFMATA 657
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +FS PR +GIIAVNL+ D LIG LT+GS ++MLFS GK VRF E++V
Sbjct: 658 SGTVKKTPLQDFSRPRSAGIIAVNLNEGDELIGVDLTNGSNEVMLFSAQGKVVRFAEDAV 717
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + +LT TENGYGKRT EY +R T+G
Sbjct: 718 RAMGRTATGVRGIKLMDDDKVVSLIIPRGEGH-ILTVTENGYGKRTEEAEYPTKSRATQG 776
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 777 VISIKVSERNGHVVGAIQVEDTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 836
Query: 841 SKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 837 EKVVGLQRVAE 847
>gi|398799248|ref|ZP_10558540.1| DNA gyrase, A subunit [Pantoea sp. GM01]
gi|398099116|gb|EJL89388.1| DNA gyrase, A subunit [Pantoea sp. GM01]
Length = 879
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/881 (52%), Positives = 645/881 (73%), Gaps = 13/881 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+++VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DL+KET+DF+ NYDG E+ P VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKISSELLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + ++ L++ I PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAFIEDEDITVEGLMEHITGPDFPTAAFINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ ELPYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARGEVETDAKTGRETIIVHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK++ LK I+ F+ HR+E
Sbjct: 301 MRVVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKIMTLKGIIEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR TP EAK ++ +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPTPAEAKLGLLAQSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGNDAARPEWLEAEFGIRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL +++R++E+I +EL ++++++G + RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLYILQSAERLMEVIREELVLMRDQFG----DARRTEITANSADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYTEGFNIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIA+NL +D LIG ALT+GS + MLFS +GK VRF E +V
Sbjct: 652 SGTVKKTALQEFSRPRSAGIIAINLREDDELIGVALTNGSDEAMLFSAAGKVVRFAETAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGRSA GV G++L KV++L+V ++ ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRSASGVRGIKLSANDKVVSLIVP-REEGAILTVTQNGYGKRTANSEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG V+ A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLVAS 881
+ G+QR+ + ++ + IDG A G+ +A V S
Sbjct: 831 ENVVGLQRVAEPVEEEE---LDAIDGSVAEGEEDIAPEVDS 868
>gi|119472399|ref|ZP_01614517.1| DNA gyrase, subunit A, type II topoisomerase [Alteromonadales
bacterium TW-7]
gi|119444921|gb|EAW26219.1| DNA gyrase, subunit A, type II topoisomerase [Alteromonadales
bacterium TW-7]
Length = 891
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/871 (53%), Positives = 637/871 (73%), Gaps = 30/871 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DL+KET+DF+ NYDG E+ P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++ NP+ +I +L+ IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLALIVNPDLTITELMDYIPGPDFPTAAIINGKKGIEQAYQTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRARADIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR ++ E++LN LY QTQLQ FGMNM+AL+N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGDVGEVILNNLYAQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH+LEGL IAL NID I++IR + TP EAK + +W L +V
Sbjct: 361 VVTRRTVFDLRKARDRAHMLEGLAIALANIDPIIELIRKSPTPAEAKIALTARSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ K +++ + ++ + Y +S+ QAQ IL + L +LT +E +KI+++
Sbjct: 421 KAML--EKAGEANVARPDWLADDLGIRDGQYFISEQQAQAILDLRLHKLTGLEHEKILSE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L IL++ +R++E+I DEL IK +YG RR+EI A + S EDL
Sbjct: 479 YQTLLDLIAELLHILASPERLMEVIRDELVEIKAQYGDE----RRTEINAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 ITEENVVVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ Y+FM+
Sbjct: 595 STAGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPV----REYEEDKYIFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE- 717
T+ G VKKT L+ +S R SGIIAVNL+ D LIG +TDG+ +IMLF+D+GK VRF E
Sbjct: 651 TAFGTVKKTPLTAYSRQRASGIIAVNLNEGDSLIGVDITDGTNEIMLFTDAGKVVRFKEA 710
Query: 718 ----------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENG 761
VR MGR+A GV G+++ +Q+V++L+V ++LT TENG
Sbjct: 711 EESAVVDENGNPEIRFKGVRPMGRTATGVRGIKMTDEQRVVSLIVPKTDG-AILTVTENG 769
Query: 762 YGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSE 821
YGKRT +++Y +R T+G++SIK ++RNG VV A V+ EIMLI+ G L+RTRV+E
Sbjct: 770 YGKRTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMLISNRGTLVRTRVNE 829
Query: 822 IRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ +GR+TQGVILI ++ ++ G+QR+ +I
Sbjct: 830 VSTVGRNTQGVILIRTIDEEQVVGLQRIEEI 860
>gi|334143915|ref|YP_004537071.1| DNA gyrase subunit A [Thioalkalimicrobium cyclicum ALM1]
gi|333964826|gb|AEG31592.1| DNA gyrase, A subunit [Thioalkalimicrobium cyclicum ALM1]
Length = 878
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/846 (54%), Positives = 628/846 (74%), Gaps = 10/846 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++FA+E+ I L EEM +SYL YAMSVI+GRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSEFAREIHPISLVEEMQQSYLSYAMSVIIGRALPDVRDGLKPVHRRVLFAMNELHNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDNPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF NYDG E EP+VLP+RIPNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDFTPNYDGSESEPNVLPSRIPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + + NP+ I L++ +P PDFPT GII G + + Y TG+GRV
Sbjct: 181 NIPPHNLTETINACIAFIDNPDIDIAGLVEHLPGPDFPTHGIINGTRGIREAYETGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+T IE ++ + AII++E+PYQVNK L+E+I++L+KEKK+E I+ LRDESDK G
Sbjct: 241 QIRARTLIET-DKSGKQAIIVNEIPYQVNKAKLIERIAELIKEKKIEGITALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E ++++N LYK T +Q FG+NM+AL+NGQPKLLNL+EI+ F+ HR+E
Sbjct: 300 MRIVIELRRGENADVMINNLYKLTSMQTVFGINMVALINGQPKLLNLQEIIQAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AH+LEGL +AL+NID I++I+S++T Q AK ++ W V
Sbjct: 360 VVTRRTIFELRKAREKAHLLEGLAVALSNIDEMIELIKSSATSQIAKEGMLARDWPAGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++ ++ + ++D Y+LS +QAQ IL M L RLT +EQ KI+ +Y+
Sbjct: 420 LQLLERVDPKDTRPEDLDAGFGMVSDDTYRLSAVQAQAILDMRLNRLTGLEQDKILEEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+I K+ + +IL N R+ E++ +EL +K++YG + RR+EI ++ EDLIA
Sbjct: 480 ALIAKIFEFLEILRNPDRLTEVVREELIAVKDEYG----DTRRTEIDHAYLDLDEEDLIA 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
++ ++TLS GYIK+QP+S+YRAQKRGGRGK A K+ED + Q+ +A+THD +LCFSN
Sbjct: 536 VEERIVTLSQDGYIKTQPLSDYRAQKRGGRGKSATAMKEEDEVGQILVASTHDMLLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+LYW K WQ+P R +RGKPI+N+F L E I+ ILP+S +F + + VFM+T
Sbjct: 596 RGKLYWKKTWQLPLAGRGARGKPIVNVFPLDEGESISSILPVS----EFDEQHSVFMATK 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
IVK+ L +FS PR +GIIA++L + D L+G ALT+G D+MLF+D GKA+RFNEN V
Sbjct: 652 HAIVKRVKLIDFSRPRANGIIALDLLDGDELVGTALTNGEQDVMLFADGGKAIRFNENDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR ARGV GM+L + Q V+++ ++ +LTATE+G+GK T +++Y+ NRG +G
Sbjct: 712 RVMGRQARGVRGMKLAEGQSVMSMQIA-QANTLILTATEHGFGKCTPVEDYSTINRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIKT++RNGKVV+A V E++LIT G L+RTRV+EI +GR+TQGV LI V
Sbjct: 771 VISIKTSERNGKVVSAVSVTTDQEVVLITNKGTLVRTRVAEISVVGRNTQGVKLINVGKD 830
Query: 841 SKLCGV 846
+ G+
Sbjct: 831 EWVVGI 836
>gi|254507989|ref|ZP_05120117.1| DNA gyrase, A subunit [Vibrio parahaemolyticus 16]
gi|219549097|gb|EED26094.1| DNA gyrase, A subunit [Vibrio parahaemolyticus 16]
Length = 877
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/855 (54%), Positives = 631/855 (73%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIEA-DKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQP+L NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALNNGQPQLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRKAPTPAEAKAGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEAQYGIRDGQ----YFLTETQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ +G ++RR+EI + + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELETVRDAFG----DVRRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPIIN+ L+ E+IT ILP+ +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIINILPLEEGERITAILPVD----EFSPEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLADEDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRVSE+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVSEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ ++
Sbjct: 827 AEDENVVGLQRIDEV 841
>gi|407071173|ref|ZP_11102011.1| DNA gyrase subunit A [Vibrio cyclitrophicus ZF14]
Length = 895
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/852 (54%), Positives = 630/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L ++N + +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVVDGCLAFINNEDITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K +I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKANI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L N+K++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYSQTQLQTTFGINMVALNNGQPQLFNIKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILE L++AL NID I++IR+ TP EAK ++ W L +V
Sbjct: 360 VVTRRTIFELKKARDRAHILEALSLALANIDEIIELIRNAPTPAEAKAGLVARGWELGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 AAMLERAGTDAARPDWLEDQYGIRDGQ----YFLTETQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL ++ YG + RR+EI + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELEAVREIYG----DARRTEITAAVHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLSN GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSNAGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+PQ SR +RGKPI+N+ L+ E+IT ILP+S +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPQASRTARGKPIVNILPLEEGERITAILPVS----EFSNEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +TDG+ DIMLFS SGK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIAVNLRDDDSLIGVDITDGNSDIMLFSKSGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR MGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRPMGRTASGVRGMKLPEDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK + RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSDRNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDENVVGLQRI 838
>gi|387127952|ref|YP_006296557.1| DNA gyrase subunit A [Methylophaga sp. JAM1]
gi|386275014|gb|AFI84912.1| DNA gyrase subunit A [Methylophaga sp. JAM1]
Length = 859
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/851 (53%), Positives = 624/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A E+ SI +E+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSEIALELDSISIEDEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNSWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD AAM
Sbjct: 61 SPYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQPFSMRYMLVDGQGNFGSVDGDPPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DLDKET+DFI NYD E EP+VLPT+ P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHEMLADLDKETVDFIPNYDESESEPAVLPTKFPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++ + ++ +P + +L++ +P PDFPTAGII G + + + Y TG+GRV
Sbjct: 181 NIPPHNLTEILNACIAIIDDPSVTTRELMEFVPGPDFPTAGIINGANGIAEAYETGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + +II+ ELPYQVNK LLEKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRARAEIETNEATGQQSIIVHELPYQVNKARLLEKIAELVKEKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+V+ +KR ++PE++LN LY+QTQLQ FG+NM+A+V+GQP+ L LK IL FI HR+E
Sbjct: 301 MRMVVVIKRGDVPEVILNNLYQQTQLQTVFGINMVAIVDGQPRTLGLKPILEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR+I+ELRKAR+ AHILEGL AL NID I++I+++ +P EA+ ++ W +
Sbjct: 361 VVTRRSIYELRKARDRAHILEGLATALANIDEVIELIKASPSPSEAREALLSQGWRSEMI 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++G + + L Y LS +QAQ IL M L RLT +EQ KI+ +Y
Sbjct: 421 LEMLGAAGAQASRPEDLAAEFGLVEGQYY-LSPVQAQAILDMRLHRLTGLEQDKILQEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
V+ ++ DL ILS+ ++ +I EL I ++YG + RR+EI+ ++ + EDLI
Sbjct: 480 EVLDQIRDLLAILSDPDNLMAVIRQELVAINDEYGDN----RRTEILDTHLDLTLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
++MV+TLS+ GY K+Q + Y+AQ+RGG+GK A KDED+I LFIANTHD +LCFS+
Sbjct: 536 EEEMVVTLSHAGYAKTQQLDTYQAQRRGGKGKAATSMKDEDFIEHLFIANTHDTLLCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YW KV+++PQG R +RGKPI+N+ L+ E+I +LP+ R+F + ++FM+T+
Sbjct: 596 TGKVYWKKVYELPQGGRTARGKPIVNLLPLEENERINAVLPI----REFEADKFIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L ++S PR +GIIAV+L ++D L+G ALTDG D+MLFS +GK +RF E V
Sbjct: 652 SGTVKKTPLVDYSRPRANGIIAVDLKDDDKLVGVALTDGESDVMLFSSNGKVIRFPETDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR +RGV GMRL +++I+L+++ Q+ ++LTATE GYGKRT ++EY RG +G
Sbjct: 712 RSMGRVSRGVRGMRLADGEQIISLIIA-QQEGAILTATEFGYGKRTNLEEYRVQGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
IISI+T+ RNG+VV A V +IMLIT GG L+RT V + +GR+TQGV LI + N+
Sbjct: 771 IISIQTSARNGQVVGAVQVCDEDQIMLITNGGTLVRTPVKHVSLVGRNTQGVRLINLSNE 830
Query: 841 SKLCGVQRLCK 851
KL G++R+ +
Sbjct: 831 EKLVGLERVIE 841
>gi|88800758|ref|ZP_01116316.1| DNA gyrase subunit A [Reinekea blandensis MED297]
gi|88776534|gb|EAR07751.1| DNA gyrase subunit A [Reinekea sp. MED297]
Length = 881
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/851 (53%), Positives = 633/851 (74%), Gaps = 14/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +EEE+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MGEIAKEILHVNIEEELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R TLVDGQGNFGSIDGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYTLVDGQGNFGSIDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ LL DL+KET+D++ NYDG E+ P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKLAHSLLADLEKETVDYVDNYDGTERIPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++ L++ IP PDFPT I G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGTLALIENPDLDVDGLMEYIPGPDFPTGAYINGRKGIVEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK + + R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRAKADVVVDEKTGRESIIVHEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+RI I+LKR E +++LN LY QTQL+ FG+N +ALV+GQPK+LNLKE+L FI HR+E
Sbjct: 301 LRIAIDLKRGESGDVLLNNLYAQTQLETVFGINAVALVDGQPKVLNLKEMLEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ HILEGL +AL NID I++IRS++T EAK +++ +W L DV
Sbjct: 361 VVTRRTVFDLRKARQRGHILEGLAVALANIDEMIELIRSSATGAEAKERMLARSWALGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKL--QNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S ++ ++ + + ++ + ++ Y LS QAQ+IL M LQ+LT +E K+I +
Sbjct: 421 SAML---ERAGADVCRPEDLEEQFGVRDERYYLSPEQAQQILDMRLQKLTGLEHDKLIGE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +I + + IL++ +R++E+I +EL +K+++G + R++EI+ + ++ S EDL
Sbjct: 478 YKQIIDDIGEFLRILNSYERLMEVIREELMEVKDEFG----DARKTEIMTSRLDLSMEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +DMV+T+S+ GY K+QP+++Y AQKRGG+G+ A KD+D+I L +A++HD ILCF
Sbjct: 534 ITEEDMVVTISHSGYAKTQPLTDYEAQKRGGKGRSASALKDDDFIEHLLVASSHDTILCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S +G++YWL+V++IPQ SR +RG+P++N+ L+ +E++T ILP+ R+F + ++FM+
Sbjct: 594 STFGKVYWLRVFEIPQASRAARGRPMVNLLPLEAEERVTAILPI----RNFDPDYFIFMA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L FS PR SG+IA++L D L+G A TDG ++ML SD+GK VRF E
Sbjct: 650 TASGTVKKTSLDAFSRPRSSGLIALSLDEGDHLVGVACTDGEREVMLLSDAGKVVRFKEE 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+ARGV G+ LE Q VI+L+V ++ VLTA+E GYGKRT++ E+ RGT
Sbjct: 710 HVRPMGRTARGVRGISLEDGQSVISLIVP-QEEGFVLTASERGYGKRTVMTEFPTKGRGT 768
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG+I++ +N RNGK+V A V E+MLI+ G L+RTRV EI +GR+TQGV LI V
Sbjct: 769 KGVIAMVSNDRNGKLVGAKQVFNGDEVMLISDQGTLVRTRVDEISSLGRNTQGVKLIRVA 828
Query: 839 NKSKLCGVQRL 849
+ KL ++R+
Sbjct: 829 DDEKLVSIERI 839
>gi|410623143|ref|ZP_11333962.1| DNA gyrase subunit A [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410157344|dbj|GAC29336.1| DNA gyrase subunit A [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 882
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/855 (54%), Positives = 638/855 (74%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE++ I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MTDNAKEILPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQHFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET++F+ NYDG+E P VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVNFVPNYDGQEHIPEVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G + +++NP+ SI++L+ IIP PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCIELINNPDLSIDELLDIIPGPDFPTAAFISGRKGIVEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE+ + T II+ ELPYQVNK L+EKI+ LVKEK++E +S LRDESDK G
Sbjct: 241 YLRARAEIEQEDNGKET-IIVHELPYQVNKARLIEKIADLVKEKRIEGVSALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KRNE E++LN LY TQLQ FG+NM+AL N QP++ NLKEIL F+LHR+E
Sbjct: 300 MRIVIEVKRNESGEVLLNHLYANTQLQTVFGINMVALDNKQPRIFNLKEILQKFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KAR+ AHILEGL IAL NID I++I+++ +P +AK ++ W+L DV
Sbjct: 360 VVTRRTVFELKKARDRAHILEGLAIALVNIDAIIEMIKASQSPSDAKKSLVARGWDLGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++++ G + + ++ I + Q Y L++ QAQ IL + L +LT +E KI++
Sbjct: 420 AEMLSRAGNDAARPDWLAPDFGIREGQ----YFLTEEQAQAILDLRLNKLTGLEHDKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ + +L IL+NS+R++EII +EL I++++G RR+EI + ED
Sbjct: 476 EYKALLDIIAELLHILANSERLMEIIREELEAIRDEFGDE----RRTEITAATHDIDIED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K Q +S+Y AQ+RGG+GK A K ED+I +L +ANTHD+ILC
Sbjct: 532 LIEREDVVVTLSREGYVKYQKLSDYEAQRRGGKGKSATKMKGEDFIEKLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F YVFM
Sbjct: 592 FSTRGRLYWLKVYQLPLASRNARGRPIVNILPLEEGERITAILPI----QEFEAGKYVFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L+ +S PR +GIIAVNL++ + LIG LTDG +IMLFSD+GK VRF+E
Sbjct: 648 ATTNGTVKKTELTQYSRPRANGIIAVNLNDGNELIGVDLTDGQSEIMLFSDAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VR MGR+A GV G+RL + + V++L+V + +LTATENG+GKRT I++Y +R
Sbjct: 708 EQVRPMGRTATGVRGIRLMENENVVSLIVPQGEG-DILTATENGFGKRTPIEQYPAKSRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
TKG++SIK ++RNG VV A V+ EIMLI+ G L+RTR SE+ +GR+TQGV LI
Sbjct: 767 TKGVVSIKVSERNGLVVGAIQVDESKEIMLISDKGTLVRTRASEVSTVGRNTQGVRLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ + +QR+ ++
Sbjct: 827 ADDELVVALQRIDEV 841
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 552 GYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQ 611
G +K +++Y + G A+ D + + + + + I+ FS+ G++ Q
Sbjct: 652 GTVKKTELTQYSRPR--ANGIIAVNLNDGNELIGVDLTDGQSEIMLFSDAGKVVRFSEEQ 709
Query: 612 IPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSN 671
+ R + G I + ++N+ +++I+P + +T G K+T +
Sbjct: 710 VRPMGRTATGVRGIRL--MENENVVSLIVPQGEGD--------ILTATENGFGKRTPIEQ 759
Query: 672 FSNPRKS----GIIAVNLSNED-FLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRS 726
+ P KS G++++ +S + ++GA D S +IML SD G VR + V +GR+
Sbjct: 760 Y--PAKSRATKGVVSIKVSERNGLVVGAIQVDESKEIMLISDKGTLVRTRASEVSTVGRN 817
Query: 727 ARGVIGMRLEKKQKVIALLVSNNQKQSVL 755
+GV +R + V+AL + +Q +L
Sbjct: 818 TQGVRLIRTADDELVVALQRIDEVEQEIL 846
>gi|383189257|ref|YP_005199385.1| DNA gyrase subunit A [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371587515|gb|AEX51245.1| DNA gyrase, A subunit [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 883
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/851 (53%), Positives = 630/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ PSV+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPSVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIEDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+L LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKILGLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR+ TP EAK ++ +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRAAPTPAEAKAGLVARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + + + Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLASAGDDAARPEWLEPQFGIHDGK-YFLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L ILS+ R++E+I +EL I+++Y + RR+EI N + + EDLI
Sbjct: 480 ELLVQIAELLFILSSPDRLMEVIREELEAIRDQY----NDPRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD IL FS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILLFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIA+NL+ D LIG LTDG ++MLFS +GK VRF+E +V
Sbjct: 652 SGTVKKTALTDFSRPRSAGIIAINLNEGDELIGVDLTDGKDEVMLFSAAGKVVRFSEEAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+RL + V++L++ +LT T+NG+GKRT EY +R T+G
Sbjct: 712 RSMGRTATGVRGIRLGEGDSVVSLIIPRGDG-CILTVTQNGFGKRTESTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG V+ A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI +
Sbjct: 771 VISIKVSERNGPVIGAIQVDEADQIMMITDAGTLVRTRVSEVSTVGRNTQGVTLIRTADD 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|423121350|ref|ZP_17109034.1| DNA gyrase subunit A [Klebsiella oxytoca 10-5246]
gi|376394185|gb|EHT06836.1| DNA gyrase subunit A [Klebsiella oxytoca 10-5246]
Length = 879
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/871 (52%), Positives = 640/871 (73%), Gaps = 13/871 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + S+ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDENISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLIARPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +EL ++ ++G + RR+EI N + + EDLI
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREELEAMREQFG----DARRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LT+G+ + MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTNGNDEAMLFSAAGKVVRFKESAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
+ G+QR+ + ++ + IDG A G
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDAIDGSVAEG 858
>gi|374702043|ref|ZP_09708913.1| DNA gyrase subunit A [Pseudomonas sp. S9]
Length = 888
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/859 (52%), Positives = 640/859 (74%), Gaps = 11/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEIIPAVMPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++ NPE SI++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVINGCLALIENPELSIDELMQHIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA+ IE+ ++ R I++ ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARAEIEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE++LN LY QTQ+Q FG+N++AL++GQPK+LNLK++L FILHR+
Sbjct: 301 GMRIVIELRRGEVPEVILNNLYAQTQMQGVFGINVVALIDGQPKVLNLKDMLEVFILHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ T EAK +I W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTSAEAKEALIAKAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQSMVERAGADSCRPDNLDPQYGLRDGKYY-LSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL++++R++E+IT+EL IK ++G + RR+EI+ N ++ + DLI
Sbjct: 480 QEILAQIGELIRILTSAERLMEVITEELEGIKAEFG----DARRTEILDNRLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I+ L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHTGYAKSQPLAAYQAQRRGGKGKSATGVKDEDYISHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +LP++ ++ + +++FM+T
Sbjct: 596 SRGKVYWLKTYEIPEASRAARGRPLVNLLPLDEGEYITTMLPVN----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L FS R G+IA++L D LI A++TDGS ++MLFSD GK RF E+
Sbjct: 652 AGGTVKKTPLEQFSRQRSVGLIALDLDEGDTLISASITDGSREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLAEGQKLISMLIPEEGSQ-ILTASERGYGKRTEIGEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N+RNGK+V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 771 GVIAMVSNERNGKLVGAVQVLDGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIRLAK 830
Query: 840 KSKLCGVQRLCKITMIKKY 858
KL G+QR+ + ++ ++Y
Sbjct: 831 DEKLVGLQRVQEPSVEEEY 849
>gi|410861855|ref|YP_006977089.1| DNA gyrase subunit A [Alteromonas macleodii AltDE1]
gi|410819117|gb|AFV85734.1| DNA gyrase subunit A [Alteromonas macleodii AltDE1]
Length = 904
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/881 (53%), Positives = 641/881 (72%), Gaps = 37/881 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MSDNAKEILPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG E P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDFVPNYDGTEYIPEVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G + ++ +P +I+DL+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCVALIQDPSITIDDLMTHIPGPDFPTAAMISGRKGIEDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E + + I+++E+PYQVNK L+EKI++LVKEK++E +S LRDESDK G
Sbjct: 241 YLRAKAEI-ETDANGKETIVVNEIPYQVNKARLIEKIAELVKEKRIEGVSALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KRNE E++LN LY TQLQ FG+NM+AL NGQPK+ NLKE L FILHR+E
Sbjct: 300 MRIVIEVKRNESAEVLLNHLYANTQLQTVFGINMVALDNGQPKVFNLKETLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL IAL NID I++I+++ +P +AK ++ W+L DV
Sbjct: 360 VVTRRTVFELRKARDRAHILEGLAIALANIDPIIELIKASQSPADAKKSLVAQGWDLGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++++ G + + + I + Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 AQMLERAGDDAARPDWLMPEFGI----RDGKYYLTEQQAQAILDLRLHKLTGLEHEKILE 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++ + +L IL++ +R++E+I +EL I++++G RR+EI + + ED
Sbjct: 476 EYKQLLELIAELLHILNSPERLMEVIQEELEKIRDEFGDE----RRTEITAASHDIDIED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K Q +++Y AQ+RGGRGK A KDED I +L +ANTHD+ILC
Sbjct: 532 LIEQEDVVVTLSREGYVKYQKLTDYEAQRRGGRGKSATKMKDEDIIERLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SRN+RG+PI+N+ L++ E+IT ILP+ ++F + YV M
Sbjct: 592 FSTRGRLYWLKVYQLPFASRNARGRPIVNILPLEDNERITAILPI----KEFEEGKYVLM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS +S PR SGIIAVNL+ D LIG +T G DIMLFSD+GK VRFNE
Sbjct: 648 ATANGTVKKTDLSLYSRPRSSGIIAVNLNEGDELIGVDITHGDDDIMLFSDAGKVVRFNE 707
Query: 718 N--------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTA 757
++R MGR+A GV G+RL+ QKV++L+V VLTA
Sbjct: 708 KLRDSETGEVKRDPETGEELLALRPMGRTATGVRGIRLQDGQKVVSLIVPKGDG-PVLTA 766
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
TENG+GKRT +++Y +R T+G++SIK ++RNGKVV A V+ +EIMLI+ G L+RT
Sbjct: 767 TENGFGKRTPLEDYPAKSRATQGVVSIKVSERNGKVVGAVQVDDTNEIMLISDQGTLVRT 826
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKY 858
RVSE+ +GR+TQGV LI + G+QR+ ++ ++ +
Sbjct: 827 RVSEVSVVGRNTQGVRLIRTVEGEHVVGLQRIEEVEELQAF 867
>gi|227356091|ref|ZP_03840481.1| DNA gyrase subunit A [Proteus mirabilis ATCC 29906]
gi|227163736|gb|EEI48648.1| DNA gyrase subunit A [Proteus mirabilis ATCC 29906]
Length = 883
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/851 (54%), Positives = 627/851 (73%), Gaps = 13/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 7 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 66
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 67 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 126
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 127 RYTEVRMAKIAHELLADLEKETVDFVPNYDGTENIPAVMPTRIPNLLVNGSSGIAVGMAT 186
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N + +I +L++ I PDFPTA II G + D Y TG+G++
Sbjct: 187 NIPPHNLGEVIDGCLAYVDNEDITIEELMEYITGPDFPTAAIINGRRGILDAYRTGRGKI 246
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 247 YIRAQADIETDEKTGRETIIVTEIPYQVNKARLIEKIAELVKDKRIEGISGLRDESDKDG 306
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR+ + E+VLN L+ QTQ+Q +FG+NM+AL GQPKLLNLKEI+ FI HR+E
Sbjct: 307 MRIVVEIKRDAVGEVVLNHLFSQTQMQVSFGINMVALHQGQPKLLNLKEIIAAFIRHRRE 366
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I W+L V
Sbjct: 367 VVTRRTIFELRKARDRAHILEALAVALANIDPVIELIRQAPTPAEAKAALIAQPWDLGSV 426
Query: 421 SKIIGFNKKNYNTISKINNISKL--QNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S ++ + + +++ + ++ Y L++ QAQ IL + LQ+LT +E +K++++
Sbjct: 427 SAML--ERAGDSNVARPEWLEPQFGVHDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDE 484
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y ++ ++ +L IL + +R++++I +EL IK +Y + RR+EI N + + EDL
Sbjct: 485 YRELLLQIAELLHILRSPERLMDVIREELTAIKTQY----NDPRRTEITENTADINIEDL 540
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCF
Sbjct: 541 INEENVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCF 600
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GRLYW+KV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + +VFM+
Sbjct: 601 SSRGRLYWMKVYQLPEASRGARGRPIINLLPLEQDERITAILPV----REYEEGKFVFMA 656
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +FS PR +GIIAVNL++ D LIG LTDGS + MLFS GK VRF E
Sbjct: 657 TASGTVKKTPLQDFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEAMLFSADGKVVRFAEE 716
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+A GV GM+L KV++L++ + +LT TENGYGKRT+ EY NR T
Sbjct: 717 CVRPMGRTATGVRGMKLVDDDKVVSLIIPRGEG-DILTVTENGYGKRTVQSEYPTKNRAT 775
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 776 QGVISIKVSERNGKVVGAIQVEETDQIMMITNAGTLVRTRVSEVSIVGRNTQGVTLIRTT 835
Query: 839 NKSKLCGVQRL 849
+ G+QR+
Sbjct: 836 EDELVVGLQRV 846
>gi|417950217|ref|ZP_12593343.1| DNA gyrase subunit A [Vibrio splendidus ATCC 33789]
gi|342806981|gb|EGU42185.1| DNA gyrase subunit A [Vibrio splendidus ATCC 33789]
Length = 880
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/852 (54%), Positives = 632/852 (74%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L +++N E +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVVDGCLALINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADIEA-DKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELKKARDRAHILEALSLALANIDEVIELIKNAPTPAEAKIGLVSRGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPDWLEDQYGIRDGQ----YFLTETQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL ++ YG RR+EI + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELEAVREIYGDE----RRTEITAAVHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLSN GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSNAGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+S +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILPVS----EFSNDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL +D LIG +T+G DIMLFS SGK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIAVNLREDDSLIGVDITNGDSDIMLFSKSGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTASGVRGMKLPEDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ + G+QR+
Sbjct: 827 SDDENVVGLQRI 838
>gi|323497716|ref|ZP_08102731.1| DNA gyrase subunit A [Vibrio sinaloensis DSM 21326]
gi|323317192|gb|EGA70188.1| DNA gyrase subunit A [Vibrio sinaloensis DSM 21326]
Length = 877
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/855 (54%), Positives = 629/855 (73%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K +E ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEVEA-DKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I +IR TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEAQYGIRDGQ----YFLTETQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I +EL +++ +G + RR+EI + + E+
Sbjct: 476 EYKALLDEIAELMHILASTERLMEVIREELETVRDAFG----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLSN GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSNAGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILPVD----EFSPEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLADEDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ ++
Sbjct: 827 AEDESVVGLQRIDEV 841
>gi|197285591|ref|YP_002151463.1| DNA gyrase subunit A [Proteus mirabilis HI4320]
gi|425068525|ref|ZP_18471641.1| DNA gyrase subunit A [Proteus mirabilis WGLW6]
gi|425072010|ref|ZP_18475116.1| DNA gyrase subunit A [Proteus mirabilis WGLW4]
gi|194683078|emb|CAR43604.1| DNA gyrase subunit A [Proteus mirabilis HI4320]
gi|404597813|gb|EKA98306.1| DNA gyrase subunit A [Proteus mirabilis WGLW4]
gi|404599357|gb|EKA99812.1| DNA gyrase subunit A [Proteus mirabilis WGLW6]
Length = 877
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/851 (54%), Positives = 627/851 (73%), Gaps = 13/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLEKETVDFVPNYDGTENIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N + +I +L++ I PDFPTA II G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYVDNEDITIEELMEYITGPDFPTAAIINGRRGILDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRAQADIETDEKTGRETIIVTEIPYQVNKARLIEKIAELVKDKRIEGISGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR+ + E+VLN L+ QTQ+Q +FG+NM+AL GQPKLLNLKEI+ FI HR+E
Sbjct: 301 MRIVVEIKRDAVGEVVLNHLFSQTQMQVSFGINMVALHQGQPKLLNLKEIIAAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I W+L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPVIELIRQAPTPAEAKAALIAQPWDLGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKL--QNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S ++ + + +++ + ++ Y L++ QAQ IL + LQ+LT +E +K++++
Sbjct: 421 SAML--ERAGDSNVARPEWLEPQFGVHDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y ++ ++ +L IL + +R++++I +EL IK +Y + RR+EI N + + EDL
Sbjct: 479 YRELLLQIAELLHILRSPERLMDVIREELTAIKTQY----NDPRRTEITENTADINIEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCF
Sbjct: 535 INEENVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GRLYW+KV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + +VFM+
Sbjct: 595 SSRGRLYWMKVYQLPEASRGARGRPIINLLPLEQDERITAILPV----REYEEGKFVFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +FS PR +GIIAVNL++ D LIG LTDGS + MLFS GK VRF E
Sbjct: 651 TASGTVKKTPLQDFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEAMLFSADGKVVRFAEE 710
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+A GV GM+L KV++L++ + +LT TENGYGKRT+ EY NR T
Sbjct: 711 CVRPMGRTATGVRGMKLVDDDKVVSLIIPRGEG-DILTVTENGYGKRTVQSEYPTKNRAT 769
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 770 QGVISIKVSERNGKVVGAIQVEETDQIMMITNAGTLVRTRVSEVSIVGRNTQGVTLIRTT 829
Query: 839 NKSKLCGVQRL 849
+ G+QR+
Sbjct: 830 EDELVVGLQRV 840
>gi|354598628|ref|ZP_09016645.1| DNA gyrase, A subunit [Brenneria sp. EniD312]
gi|353676563|gb|EHD22596.1| DNA gyrase, A subunit [Brenneria sp. EniD312]
Length = 879
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/869 (53%), Positives = 637/869 (73%), Gaps = 10/869 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KSYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+K+T+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELLADLEKDTVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + + S+ L++ I PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGKRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL GQPK++ LK+IL FI HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILSAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR +P EAK +I +W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAQSPAEAKAGLIAQSWALGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGIRDGRYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL+N +R++E+I +EL IK +Y ++ RR+EI N + + EDLI
Sbjct: 480 ELLAQIAELLYILANPERLMEVIREELEAIKEQY----RDERRTEITHNTADINIEDLIC 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LTDGS ++MLFS GK VRF+E +V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSADGKVVRFSEGAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L+ + +V++L++ +LT T+NG+GKRT + EY +R TKG
Sbjct: 712 RSMGRTATGVRGINLQGEDRVVSLIIPRGDG-DILTVTQNGFGKRTAVSEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGNVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTA 869
+ G+QR+ + ++ V+ ++G A
Sbjct: 831 ENVVGLQRVAEPVEDEELDDVVKVEGEIA 859
>gi|350561184|ref|ZP_08930023.1| DNA gyrase, A subunit [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349781291|gb|EGZ35599.1| DNA gyrase, A subunit [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 870
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/854 (53%), Positives = 632/854 (74%), Gaps = 15/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKE+ + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N +N
Sbjct: 1 MAEFAKEIFPVNLEDEMQQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNEYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YDA+VRMAQ FS+R L+DGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDAIVRMAQPFSVRYMLIDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I+ ELL D+DKET+DF+ NYDG E+EPSVLP++ P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMARIAQELLADIDKETVDFVDNYDGSEREPSVLPSKFPHLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
N+PPHNL EVID + ++ +PE S++ L++ +P PDFPTA II G+ +HD Y TG+GRV
Sbjct: 181 NVPPHNLGEVIDACVALIDDPEISVDGLMEHLPGPDFPTAAIINGVDGIHDAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+TH E R AII+ ELPYQVNK L+EKI++LVKE+++E IS LRDESDK G
Sbjct: 241 YIRARTHTEPLEGGQREAIIVSELPYQVNKARLIEKIAELVKERRIEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E+PE+VLN L+ TQLQN FG+NM+ALV+GQP+LL+L++IL F+ HR+E
Sbjct: 301 MRIVIELRRGEVPEVVLNHLFMHTQLQNVFGINMVALVDGQPRLLDLRQILEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIF+LRKARE AHILEGL +AL NID I +I++ P EAK ++ W V
Sbjct: 361 VVTRRTIFDLRKARERAHILEGLAVALANIDEIIALIKAAPNPAEAKAGLLGRAWPPGMV 420
Query: 421 SKIIGFNKKNYNTISKINNISKL--QNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ ++ ++ S+ ++ D Y+LS+ QAQ IL + L RLT +EQ+KI+++
Sbjct: 421 TTML---ERAGAHASRPEELAAEFGPGEDGYRLSEAQAQAILDLRLHRLTGLEQEKILDE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y +++ + DL DIL + +R+ E I +EL ++ +YG + RR+EI N + DL
Sbjct: 478 YRELLELIDDLLDILGSGERLQEEIRNELLAVREQYG----DARRTEIREAHANLTLADL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP++ YRAQ+RGGRGK A ++ED+I++L +ANTHD ILCF
Sbjct: 534 IGEEDVVVTLSHAGYVKYQPLTAYRAQRRGGRGKAATSFREEDFIDRLLVANTHDTILCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YW+KV+++PQGSR +RGKPI+N+ L+ E+I ILP+ R + ++ +VFM
Sbjct: 594 SSRGRVYWIKVYELPQGSRVARGKPIVNLLPLEPDERINAILPV----RGYAEDRFVFMV 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L++FS PR +GIIAV+L D+L+ ALTDGS ++ML + +GKAVRF E
Sbjct: 650 TAGGTVKKTPLTDFSRPRTAGIIAVDLREGDYLVDVALTDGSQEVMLVTSAGKAVRFPET 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VRAMGR+A GV G+R+++ +VIALL+ + S L A+E GYGKRT E+ H RG
Sbjct: 710 DVRAMGRAACGVRGVRMDETHRVIALLIVG--EGSALFASEFGYGKRTGFDEFPVHRRGG 767
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I+I+ RNG ++ A V E+MLIT G L+RT V++I +GR+TQGV LI +
Sbjct: 768 QGVIAIQCAGRNGMLIGAARVLDDQEVMLITDAGTLVRTAVAQIPLIGRNTQGVRLIRLS 827
Query: 839 NKSKLCGVQRLCKI 852
KL + R+ ++
Sbjct: 828 EGEKLAELARVERL 841
>gi|260768285|ref|ZP_05877219.1| DNA gyrase subunit A [Vibrio furnissii CIP 102972]
gi|260616315|gb|EEX41500.1| DNA gyrase subunit A [Vibrio furnissii CIP 102972]
Length = 878
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/851 (54%), Positives = 630/851 (74%), Gaps = 17/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAFIDNESITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIEA-DKHGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID+ I +IR STP EAK ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDDIIDLIRKASTPAEAKAGLVARGWALGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQ---NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ + T + +LQ + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAML----ERAGTDAARPEWLELQYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ YG + RR+EI + + E+
Sbjct: 476 EYKQLLEEIAELMHILASTERLMEVIREELQAVRDGYG----DARRTEITAASHDIDLEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L++ E+IT ILP++ +F + ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEDNERITAILPVT----EFSDDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L FSN R +G+IAVNL ++D LIG +T+G +IMLFS SGK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFSNVRSNGLIAVNLRDDDSLIGVDITNGDSEIMLFSKSGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L + +V++L+V +LT TENGYGKRT++ EY +R
Sbjct: 708 DQVRAMGRTASGVRGMKLMEGDQVVSLIVPKTDG-DILTVTENGYGKRTVLAEYPAKSRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG+VV A + E M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGRVVGAVQADEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQR 848
++ G+QR
Sbjct: 827 SEDEQVVGLQR 837
>gi|406596976|ref|YP_006748106.1| DNA gyrase subunit A [Alteromonas macleodii ATCC 27126]
gi|407687888|ref|YP_006803061.1| DNA gyrase subunit A [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|406374297|gb|AFS37552.1| DNA gyrase subunit A [Alteromonas macleodii ATCC 27126]
gi|407291268|gb|AFT95580.1| DNA gyrase subunit A [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 904
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/881 (53%), Positives = 641/881 (72%), Gaps = 37/881 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MSDNAKEILPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG E P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDFVPNYDGTEHIPEVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G + ++ +P +I+DL+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCVALIQDPSITIDDLMTHIPGPDFPTAAMISGRKGIEDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E + + I+++E+PYQVNK L+EKI++LVKEK++E +S LRDESDK G
Sbjct: 241 YLRAKAEI-ETDSNGKETIVVNEIPYQVNKARLIEKIAELVKEKRIEGVSALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KRNE E++LN LY TQLQ FG+NM+AL NGQPK+ NLKE L FILHR+E
Sbjct: 300 MRIVIEVKRNESAEVLLNHLYANTQLQTVFGINMVALDNGQPKVFNLKETLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL IAL NID I++I+++ +P +AK ++ W+L DV
Sbjct: 360 VVTRRTVFELRKARDRAHILEGLAIALANIDPIIELIKASQSPADAKKSLVAQGWDLGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++++ G + + + I + Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 AQMLERAGDDAARPDWLMPEFGI----RDGKYYLTEQQAQAILDLRLHKLTGLEHEKILE 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++ + +L IL++ +R++E+I +EL +++++G RR+EI + + ED
Sbjct: 476 EYKQLLEIIAELLHILNSPERLMEVIQEELEKVRDEFGDE----RRTEITAASHDIDIED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K Q +++Y AQ+RGGRGK A KDED+I +L +ANTHD+ILC
Sbjct: 532 LIEQEDVVVTLSREGYVKYQKLTDYEAQRRGGRGKSATKMKDEDFIERLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + +V M
Sbjct: 592 FSTRGRLYWLKVYQLPFASRNARGRPIVNILPLEENERITAILPI----KEFEEGKFVLM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS +S PR SGIIAVNL+ D LIG +T G DIMLFSD+GK VRFNE
Sbjct: 648 ATANGTVKKTDLSLYSRPRSSGIIAVNLNEGDELIGVDITHGDDDIMLFSDAGKVVRFNE 707
Query: 718 N--------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTA 757
++R MGR+A GV G+RL+ QKV++L+V +LTA
Sbjct: 708 KLRDSETGEVKRDPETGEELLALRPMGRTATGVRGIRLQDGQKVVSLIVPKGDG-PILTA 766
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
TENG+GKRT +++Y +R T+G++SIK ++RNGKVV A V+ +EIMLI+ G L+RT
Sbjct: 767 TENGFGKRTPLEDYPAKSRATQGVVSIKVSERNGKVVGAVQVDETNEIMLISDQGTLVRT 826
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKY 858
RV E+ +GR+TQGV LI + G+QR+ ++ ++++
Sbjct: 827 RVGEVSVVGRNTQGVRLIRTVEGEHVVGLQRIEEVEELQEF 867
>gi|350530989|ref|ZP_08909930.1| DNA gyrase subunit A [Vibrio rotiferianus DAT722]
Length = 879
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/852 (54%), Positives = 629/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRKAPTPAEAKAGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEEQYGIRDGQ----YFLTETQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I +EL +++ +G + RR+EI + + E+
Sbjct: 476 EYKALLDEIAELMHILASTERLMEVIREELEAVRDGFG----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P +R +RGKPI+N+ L+ E+IT ILP+ +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPHATRTARGKPIVNILPLEEGERITAILPVD----EFSPEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLADEDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDESVVGLQRI 838
>gi|375130818|ref|YP_004992918.1| DNA gyrase subunit A [Vibrio furnissii NCTC 11218]
gi|315179992|gb|ADT86906.1| DNA gyrase, subunit A [Vibrio furnissii NCTC 11218]
Length = 877
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/851 (54%), Positives = 628/851 (73%), Gaps = 17/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAFIDNESITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIEA-DKHGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID+ I +IR STP EAK ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDDIIDLIRKASTPAEAKAGLVARGWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGIRDGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ YG + RR+EI + + E+
Sbjct: 476 EYKQLLEEIAELMHILASTERLMEVIREELQAVRDGYG----DARRTEITAASHDIDLEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L++ E+IT ILP++ +F + ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEDNERITAILPVT----EFSDDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L FSN R +G+IAVNL ++D LIG +T+G +IMLFS SGK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFSNVRSNGLIAVNLRDDDSLIGVDITNGDSEIMLFSKSGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L + +V++L+V +LT TENGYGKRT++ EY +R
Sbjct: 708 DQVRAMGRTASGVRGMKLMEGDQVVSLIVPKTDG-DILTVTENGYGKRTVLAEYPAKSRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG+VV A + E M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGRVVGAVQADEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQR 848
++ G+QR
Sbjct: 827 SEDEQVVGLQR 837
>gi|300723734|ref|YP_003713041.1| DNA gyrase subunit A, type II topoisomerase [Xenorhabdus
nematophila ATCC 19061]
gi|297630258|emb|CBJ90909.1| DNA gyrase, subunit A, type II topoisomerase [Xenorhabdus
nematophila ATCC 19061]
Length = 879
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/867 (54%), Positives = 626/867 (72%), Gaps = 29/867 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLEKETVDFVPNYDGTEQIPEVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEVIDGCLAYIDDENISIEGLMEYIPGPDFPTAAIINGRRGIQEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II++E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADEKTGRETIIVNEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKLLNLKDILSAFVCHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L IAL NID I++IR STP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARERAHILEALAIALANIDPVIELIRRASTPAEAKASLVSQPWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + LQ+LT +E +K+++
Sbjct: 421 AAMLEQAGDDAARPEWLEPEYGI----HEGKYYLTEQQAQAILDLRLQKLTGLEHEKLLD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y ++K + +L IL N +R++E+I +EL IK +Y + RR+E+ N+ + + ED
Sbjct: 477 EYRELLKVIAELLFILENPERLMEVIREELLAIKEQY----NDARRTELTENSADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A TK+ED+I +L +ANTHD ILC
Sbjct: 533 LINQEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARTKEEDFIERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FSN G++YW+KV+Q+P+ SR +RG+PI+N+ L E+IT ILP+ R++ +FM
Sbjct: 593 FSNKGKMYWMKVYQLPEASRGARGRPIVNLLPLGQNERITAILPV----REYEDGLNIFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ GIVKKT LS FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E
Sbjct: 649 ATASGIVKKTKLSEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAQGKVVRFLE 708
Query: 718 -------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGK 764
VRAMGR+A GV G++L KV++L++ + + +LT TENGYGK
Sbjct: 709 EEEETLEDGTVRVKGVRAMGRTATGVRGIKLSAGDKVVSLIIPRGEGE-ILTVTENGYGK 767
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT EY +R T+G+ISIK ++RNG V+ A V +IM+IT G L+RTRVSE+
Sbjct: 768 RTAESEYPTKSRATQGVISIKVSERNGNVIGAIQVEPTDQIMMITDAGTLVRTRVSEVSV 827
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCK 851
+GR+TQGV LI K+ G+QR+ +
Sbjct: 828 VGRNTQGVTLIRTAEDEKVVGLQRVAE 854
>gi|120598757|ref|YP_963331.1| DNA gyrase subunit A [Shewanella sp. W3-18-1]
gi|146293166|ref|YP_001183590.1| DNA gyrase subunit A [Shewanella putrefaciens CN-32]
gi|386313697|ref|YP_006009862.1| DNA gyrase subunit A [Shewanella putrefaciens 200]
gi|120558850|gb|ABM24777.1| DNA gyrase subunit A [Shewanella sp. W3-18-1]
gi|145564856|gb|ABP75791.1| DNA gyrase subunit A [Shewanella putrefaciens CN-32]
gi|319426322|gb|ADV54396.1| DNA gyrase, A subunit [Shewanella putrefaciens 200]
Length = 917
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/874 (54%), Positives = 627/874 (71%), Gaps = 35/874 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E+ P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDFVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 181 NIPPHNLTEVVKGCLALIEEPSLSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RA IE + R II+ E+PYQVNK L+EKI++LVK+KKLE IS LRDESDK G
Sbjct: 241 IMRALADIETEDN-GRERIIVTEIPYQVNKARLIEKIAELVKDKKLEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP +AK K++E W L V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWELGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + + Y L++ QAQ IL++ L RLT +E KII +
Sbjct: 420 Q---GMLEKAGDDAARPEWLEPQYGIRDGQYFLTEQQAQAILELRLHRLTGLEHDKIIAE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+I +EL I +YG + RR+ I N I+ S EDL
Sbjct: 477 YEELLEFIAGLLFILRSPERLMEVIKEELEEILTEYG----DARRTVINANEIDMSLEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K QP+S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 533 INEEDVVVTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR +RG+PI+N+ L + E+IT ILP+ R++ + Y+ M+
Sbjct: 593 SDFGKMYWLKVYQLPLASRTARGRPIVNLLPLSDGERITAILPV----REYAADKYIIMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L+ +SNPR +GIIAVNL + D LIG +T+G +IMLFS+ GK VRF E
Sbjct: 649 TSNGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFGEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
S+R MGR+A GV G+RLE+ QKV++L+V ++LT T
Sbjct: 709 VRDSETGEVKTDPETGEEVLSLRPMGRTATGVRGIRLEEGQKVVSLIVPKGDG-AILTVT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT + EY +R TKG++SIK ++RNG VV A V EIMLI+ G L+RT
Sbjct: 768 ENGYGKRTQLSEYPAKSRATKGVVSIKVSERNGAVVGAVQVGSNDEIMLISDKGTLVRTP 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ +GR+TQGV +I + K+ G+QR+ +I
Sbjct: 828 AKGVSIIGRNTQGVTIIRTASDEKVVGLQRIDEI 861
>gi|407792835|ref|ZP_11139871.1| DNA gyrase subunit A [Idiomarina xiamenensis 10-D-4]
gi|407217093|gb|EKE86929.1| DNA gyrase subunit A [Idiomarina xiamenensis 10-D-4]
Length = 881
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/855 (54%), Positives = 629/855 (73%), Gaps = 19/855 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+EV + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MTDLAREVAPVNIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELRNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+++LL DLDKET+DF+ NYDG E+ P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHQLLADLDKETVDFVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++ P+ I++L++ IP PDFPTA I G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVINGCLAMIDTPDIGIDELMEYIPGPDFPTAASISGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + R II+ E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 HLRAKAEIERDDNGGRETIIVTEIPYQVNKARLIEKIAELVKEKRLEGISGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIELKR E+ E+VLN LY TQ+Q FG+NM+AL QP+L NL+++L FI HR+E
Sbjct: 301 MRIVIELKRGEVGEVVLNHLYANTQMQVVFGINMVALDKNQPRLFNLRDMLEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR+++ELRKARE AHILEGL IAL NID I++IR + TP EAK + +W L DV
Sbjct: 361 VVTRRSVYELRKARERAHILEGLAIALANIDEIIELIRRSPTPAEAKEALTSRSWQLGDV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Y+L+ QAQ IL + L +LT +E +KI++
Sbjct: 421 AAMLERAGVDAARPDHLPAEFGVV----GGHYQLTLEQAQAILDLRLHKLTGLEHEKILD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++K++ L IL++++R++E+I +EL +K ++G + RR+EI + S ED
Sbjct: 477 EYKELLKQIEALLLILNSAERLMEVIREELEAVKAEFG----DARRTEITAATHDISMED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP++EY AQ+RGG+GK A KDED+I +L++ANTHD ILC
Sbjct: 533 LINEEDVVLTLSHHGYVKYQPLTEYEAQRRGGKGKSATKMKDEDFIERLWVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GR+YW+KV+Q+P +R SRG+PI+N+ L+ E+IT ILP RD+P++ +V M
Sbjct: 593 FSTLGRIYWMKVYQLPLATRISRGRPIVNLLPLEENERITAILP----TRDYPEDKFVVM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L ++S PR GIIA+NL ++D LIG +TDG +IMLFSD GK VRF E
Sbjct: 649 ATRNGTVKKTPLVDYSRPRNGGIIALNLVDDDELIGVDITDGGDEIMLFSDGGKVVRFTE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLV----SNNQKQSVLTATENGYGKRTLIKEYTK 773
+ VR+MGR+A GV G+RLE Q+V++L+V ++++ +LT T NG+GKRT I +Y
Sbjct: 709 DQVRSMGRTATGVRGIRLEPGQRVVSLIVPRAYDSDEEPKILTVTANGFGKRTGITQYPA 768
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
+R TKG++SIK + RNG VV A V +EIMLI+ G L+RTRV+E+ +GR+TQGV
Sbjct: 769 KSRATKGVVSIKVSDRNGPVVGAMEVIDGNEIMLISNKGTLVRTRVNEVSTVGRNTQGVR 828
Query: 834 LITVENKSKLCGVQR 848
LI + + G+QR
Sbjct: 829 LIRTADDETVVGLQR 843
>gi|317492550|ref|ZP_07950977.1| DNA gyrase, subunit A [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919300|gb|EFV40632.1| DNA gyrase, subunit A [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 882
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/851 (53%), Positives = 629/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P+VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + ++ L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVINGCLAYIDDENITVEGLMQHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R II+ E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 YIRAKAEVEADEKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL GQPKLL LK+ L F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNHLYSLTQMQVTFGINMVALHQGQPKLLTLKDCLQAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL+NID I++IR P EAK ++ W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALSNIDPIIELIRHAPNPAEAKALLVARGWALGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ N + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDNAARPEWLEPQFGIRDGHYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ L IL + R++E+I +EL +++++G + RR+EI N + + EDLI+
Sbjct: 480 ELLEQIAALIFILESPDRLMEVIREELIAVRDQFG----DARRTEITENTADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIINLLPLEANERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIAVNL+ D LIG LTDGS ++MLFS +GK VRF E+ V
Sbjct: 652 SGTVKKTALTDFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAAGKVVRFPESQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + +V++L++ + +LT TENGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGEDRVVSLIIPRGEG-DILTVTENGYGKRTGVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGNVVGAVQVDACDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|91793303|ref|YP_562954.1| DNA gyrase, A subunit [Shewanella denitrificans OS217]
gi|91715305|gb|ABE55231.1| DNA gyrase subunit A [Shewanella denitrificans OS217]
Length = 908
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/874 (54%), Positives = 626/874 (71%), Gaps = 35/874 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YDA+VR+AQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDAIVRLAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ LL DL+KET+DF+ NYDG E P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMQKLAHSLLADLEKETVDFVPNYDGTEMIPAVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ P SI L++ IP PDFPTA I G + D Y TG+GR
Sbjct: 181 NIPPHNLTEVVKGCLALIDEPSLSIEQLMEYIPGPDFPTAASINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++R+K IE + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 VMRSKAEIETEDN-GRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L IAL NID I +I+++ TP EAK +++ W L V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAIALANIDPIIALIKASPTPAEAKLQLVAQGWELGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + + Y L++ QAQ IL++ L RLT +E +KI+++
Sbjct: 420 Q---GMLEKAGDDAARPEWLEPEYGIRDGQYFLTEQQAQAILELRLHRLTGLEHEKILSE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE ++ + L IL + +R++E+I +EL + +YG ++RR+ I N I+ S EDL
Sbjct: 477 YEELLIVIAGLLLILRSPERLMEVIKEELEEVLEQYG----DVRRTIINENEIDMSLEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY K QP+S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 533 INEEDVVVTLSHTGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR +RG+PI+N+ L + E+IT ILP+ R++ + ++ M+
Sbjct: 593 SDFGKMYWLKVYQLPLASRTARGRPIVNLLPLSDGERITAILPV----REYADDKFIIMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L+ +SNPR +GIIAVNL + D LIG +TDGS DIMLFS+ GK VRFNE
Sbjct: 649 TAHGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITDGSDDIMLFSNEGKVVRFNEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G++LE QKV++L+V ++LT T
Sbjct: 709 ARDSETGEVKIDAETGEEIIALRPMGRTATGVRGIKLEDGQKVVSLIVPKGDG-AILTVT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT + EY +RGTKG++SIK +RNG VV A V + EIMLI+ G L+RT
Sbjct: 768 ENGYGKRTELNEYPAKSRGTKGVVSIKVTERNGAVVGAVQVGEFDEIMLISDKGTLVRTP 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ +GR+TQGV +I K+ G+QR+ +I
Sbjct: 828 AEGVSIIGRNTQGVTIIRTAEDEKVVGLQRIEEI 861
>gi|359451680|ref|ZP_09241078.1| DNA gyrase subunit A [Pseudoalteromonas sp. BSi20480]
gi|392539071|ref|ZP_10286208.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
marina mano4]
gi|358042502|dbj|GAA77327.1| DNA gyrase subunit A [Pseudoalteromonas sp. BSi20480]
Length = 899
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/879 (53%), Positives = 637/879 (72%), Gaps = 38/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DL+KET+DF+ NYDG E+ P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++ NP+ +I +L+ IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLALIVNPDLTITELMDYIPGPDFPTAAIINGKKGIEQAYQTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRARADIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR ++ E++LN LY QTQLQ FGMNM+AL+N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGDVGEVILNNLYAQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH+LEGL IAL NID I++IR + TP EAK + +W L +V
Sbjct: 361 VVTRRTVFDLRKARDRAHMLEGLAIALANIDPIIELIRKSPTPAEAKIALTARSWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ K +++ + ++ + Y +S+ QAQ IL + L +LT +E +KI+++
Sbjct: 421 KAML--EKAGEANVARPDWLADDLGIRDGQYFISEQQAQAILDLRLHKLTGLEHEKILSE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L IL++ +R++E+I DEL IK +YG RR+EI A + S EDL
Sbjct: 479 YQTLLDLIAELLHILASPERLMEVIRDELVEIKAQYGDE----RRTEINAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 ITEENVVVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ Y+FM+
Sbjct: 595 STAGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPV----REYEEDKYIFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE- 717
T+ G VKKT L+ +S R SGIIAVNL+ D LIG +TDG+ +IMLF+D+GK VRF E
Sbjct: 651 TAFGTVKKTPLTAYSRQRASGIIAVNLNEGDSLIGVDITDGTNEIMLFTDAGKVVRFKEA 710
Query: 718 ------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR+A GV G+++ +Q+V++L+V +
Sbjct: 711 EESAVVDENGNPVLDEEGNPEIRFKGVRPMGRTATGVRGIKMTDEQRVVSLIVPKTDG-A 769
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LT TENGYGKRT +++Y +R T+G++SIK ++RNG VV A V+ EIMLI+ G
Sbjct: 770 ILTVTENGYGKRTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMLISNRGT 829
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ +GR+TQGVILI ++ ++ G+QR+ +I
Sbjct: 830 LVRTRVNEVSTVGRNTQGVILIRTIDEEQVVGLQRIEEI 868
>gi|119944871|ref|YP_942551.1| DNA gyrase subunit A [Psychromonas ingrahamii 37]
gi|119863475|gb|ABM02952.1| DNA gyrase subunit A [Psychromonas ingrahamii 37]
Length = 898
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/886 (52%), Positives = 641/886 (72%), Gaps = 41/886 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++F +V I +E+E+ SYL+YAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSEFVSDVSPINIEDELKTSYLEYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLRNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+DF+ NYDG E P V+PT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMQKLAHELLADLEKETVDFVPNYDGTEFIPEVMPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ + + +I+ LI+ IP PDFPT+GII G + D Y+TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLALIEDADITIDQLIEFIPGPDFPTSGIINGRKGIIDAYHTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE ++ R I++ ELPYQVNK L+EKI++ VK+KK+E IS LRDESDK G
Sbjct: 241 KVRAKADIEVNDKTGRETIVVHELPYQVNKARLIEKIAEFVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+V+E+KR E+ E+VLN LY QTQ+Q TFG+N +AL +GQPKL NLKE+L FILHR+E
Sbjct: 301 MRMVVEVKRGEVGEVVLNNLYAQTQMQVTFGINAVALDHGQPKLFNLKEMLEAFILHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE AHILEGL I+L NI+ I +IR ++TP EAK + WNL V
Sbjct: 361 VVTRRTVFELKKARERAHILEGLAISLANIEPIIALIRHSATPGEAKIALQAQGWNLGHV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G + + ++ I ++ Y ++++QAQ IL + LQ+LT +E +KI+
Sbjct: 421 SAMLEASGVDAARPDGLA----IEFGVRDNQYFMTEVQAQAILDLRLQKLTGLEHEKILT 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++ + L IL N +R++E+I +EL IK + + RR+EI + + S ED
Sbjct: 477 EYKELLEIIAALLFILENPERLMEVIREELEEIKANFA----DPRRTEITASETDLSIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K Q +S+Y +Q+RGG+GK A KDED+I +L +A+THD ILC
Sbjct: 533 LITEEDVVVTLSHEGYVKYQVLSDYESQRRGGKGKAATKMKDEDFIEKLLVASTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SR +RG+PI+N+ L+ E+IT ILP+ RD+ + +VFM
Sbjct: 593 FSTRGRLYWLKVFQLPLASRQARGRPIVNILPLEEGERITAILPV----RDYADDKFVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS +S PR SG+IA+NL+ ++ LIG +TDGS +IM+FSD+GK VRF E
Sbjct: 649 ATANGTVKKTALSAYSRPRNSGLIAINLNEDNELIGVGITDGSNEIMIFSDAGKVVRFKE 708
Query: 718 -------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
VRAMGR+A GV G++L++ +KV++L++ N+
Sbjct: 709 AEESAVLDENGAPVLDEEGNPEIKVKGVRAMGRTATGVRGIKLKEGEKVVSLIIP-NETG 767
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LT TENGYGKRT +++Y+ +R T+G+ISIK ++RNGKVV A V+ EIMLIT G
Sbjct: 768 HILTTTENGYGKRTPLEDYSSKSRATQGVISIKVSERNGKVVGAVQVDTNDEIMLITNRG 827
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKY 858
L+RTRVSE+ +GR+TQGV LI K+ +QR+ +I + Y
Sbjct: 828 TLVRTRVSEVSVVGRNTQGVTLIRTAEGEKIVALQRIEEIEDLPVY 873
>gi|226327847|ref|ZP_03803365.1| hypothetical protein PROPEN_01728 [Proteus penneri ATCC 35198]
gi|225203551|gb|EEG85905.1| DNA gyrase, A subunit [Proteus penneri ATCC 35198]
Length = 881
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/851 (54%), Positives = 627/851 (73%), Gaps = 13/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 7 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 66
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 67 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 126
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 127 RYTEVRMAKIAHELLADLEKETVDFVPNYDGTEHIPAVMPTRIPNLLVNGSSGIAVGMAT 186
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N + +I +L++ I PDFPTA II G + D Y TG+G++
Sbjct: 187 NIPPHNLGEVIDGCLAYVDNEDITIEELMEHITGPDFPTAAIINGRRGILDAYRTGRGKI 246
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 247 YIRAQADIETDEKTGRETIIVTEIPYQVNKARLIEKIAELVKDKRIEGISGLRDESDKDG 306
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR+ + E+VLN L+ QTQ+Q +FG+NM+AL GQPKLLNLKEI+ FI HR+E
Sbjct: 307 MRIVVEIKRDAVGEVVLNHLFSQTQMQVSFGINMVALHQGQPKLLNLKEIISAFIRHRRE 366
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKAR+ AHILE L +AL NID I++IR P EAK +I W+L V
Sbjct: 367 VVTRRTIYELRKARDRAHILEALAVALANIDPVIEMIRQAPNPAEAKAALIAQPWDLGSV 426
Query: 421 SKIIGFNKKNYNTISKINNISKLQ--NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S ++ + + +++ + ++ Y L++ QAQ IL + LQ+LT +E +K++++
Sbjct: 427 STML--ERAGDSNVARPEWLEPQYGVHDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDE 484
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y +++ ++ +L IL + +R++E+I +ELN IK++Y + RR+EI N + + EDL
Sbjct: 485 YRDLLLQIAELLHILRSPERLMEVIREELNAIKDQY----NDPRRTEITENTADINIEDL 540
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCF
Sbjct: 541 INEENVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCF 600
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GRLYW+KV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + +VFM+
Sbjct: 601 SSRGRLYWMKVYQLPEASRGARGRPIINLLPLEQNERITAILPV----REYEEGKFVFMA 656
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +FS PR +GIIAVNL+ D LIG LTD + ++MLFS GK VRF E+
Sbjct: 657 TASGTVKKTPLQDFSRPRSAGIIAVNLNEGDELIGVDLTDSTNEVMLFSADGKVVRFAED 716
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+A GV GM+L KV++L++ +LT TENGYGKRT EY NR T
Sbjct: 717 CVRPMGRTATGVRGMKLSDDDKVVSLIIPRGDG-DILTVTENGYGKRTAQSEYPTKNRAT 775
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+ISIK ++RNGKVV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 776 QGVISIKVSERNGKVVGAIQVEETDQIMMITNAGTLVRTRVSEVSIVGRNTQGVTLIRTT 835
Query: 839 NKSKLCGVQRL 849
+ G+QR+
Sbjct: 836 EGELVVGLQRV 846
>gi|163748935|ref|ZP_02156186.1| DNA gyrase, A subunit [Shewanella benthica KT99]
gi|161331311|gb|EDQ02199.1| DNA gyrase, A subunit [Shewanella benthica KT99]
Length = 907
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/875 (54%), Positives = 621/875 (70%), Gaps = 37/875 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R TL+DGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYTLIDGQGNFGSVDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E P V+PTRIP LLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDFVPNYDGTEFIPEVMPTRIPTLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI G L ++ P SI L++ IP PDFPTA II G + + Y TG+GR
Sbjct: 181 NIPPHNITEVIKGCLALIEEPALSIEQLMEYIPGPDFPTAAIINGRKGIIEAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+R+K + + R II+ ELPYQVNK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 IMRSKADV-QVEDNGRERIIVHELPYQVNKARLIEKIAELVKDKKIEGITGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L IAL NID I +I+++STP EAK K++ W L V
Sbjct: 360 VVTRRTVFELRKARERAHILESLAIALANIDPIIAMIKASSTPAEAKVKLVAQGWELGHV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++ G + + I +D Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 KAMLEKAGDDAARPEWLEPEYGI----RDDRYYLTEQQAQAILDLRLHKLTGLEHEKILA 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+YE +I+ + L IL + +R++E+I +ELN I +G RR+ I N ++ S ED
Sbjct: 476 EYEELIEIIAALLYILHSPERLLEVIKEELNEILENFGDE----RRTVINANEVDMSLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+LGY K QP+++Y+AQ+RGG+GK A KDED++ +L +ANTHD ILC
Sbjct: 532 LINEEDVVVTLSHLGYAKYQPLTDYQAQRRGGKGKLAAKVKDEDFVEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS++G+LYWLKV+Q+P SR +RG+PI+N+ L E IT ILP+ RD+ + YV M
Sbjct: 592 FSDFGKLYWLKVYQLPLASRQARGRPIVNLLPLSEGEHITAILPV----RDYADDKYVIM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+TS G VKKT L +SNPR +GIIAVNL + D LIG +TDG DIMLFSD+GK VRFNE
Sbjct: 648 ATSHGTVKKTALKAYSNPRANGIIAVNLKDGDQLIGVDITDGKSDIMLFSDAGKVVRFNE 707
Query: 718 N--------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTA 757
++R MGR+A GV G+RLE QKV++L+V ++LT
Sbjct: 708 MVRDSETGLVKLDAETNEELVALRPMGRTATGVRGIRLEDGQKVVSLIVPKADG-AILTI 766
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
TENGYGKRT + EY +R TKG++SIK ++RNG VV A V EIMLI+ G L+RT
Sbjct: 767 TENGYGKRTALDEYPAKSRATKGVVSIKVSERNGAVVGAVQVGENDEIMLISDRGTLVRT 826
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ + +GR+TQGV +I K+ G+QR+ +I
Sbjct: 827 PATGVSTIGRNTQGVTIIRTAEGEKVVGLQRIDEI 861
>gi|197335945|ref|YP_002156004.1| DNA gyrase subunit A [Vibrio fischeri MJ11]
gi|423685947|ref|ZP_17660755.1| DNA gyrase subunit A [Vibrio fischeri SR5]
gi|197317435|gb|ACH66882.1| DNA gyrase, A subunit [Vibrio fischeri MJ11]
gi|371494015|gb|EHN69613.1| DNA gyrase subunit A [Vibrio fischeri SR5]
Length = 878
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/852 (54%), Positives = 628/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMDVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + N E +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLTEVVNGCLAFIENEEITIDELMNYIPGPDFPTAALISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K +IE ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKANIEA-DKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYSLTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL +AL NID I++IR+ TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARDRAHILEGLALALANIDEIIELIRNAPTPAEAKEGLISRGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I + + Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPDWLEPEFGIREGK----YFLTEQQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I DEL ++++ YG RR+EI + ED
Sbjct: 476 EYKALLDEIAELMHILASTERLMEVIRDELVMVRDMYGDE----RRTEIGAAIHDIDMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LITQEDVVVTLSREGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+PQ SR +RGKPI+N+ L+ E+IT ILP+S ++ ++ ++FM
Sbjct: 592 FSTRGKAYSLKVFQLPQASRTARGKPIVNILPLEEGERITAILPVS----EYSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+ R +G+IAVNL +D LIG +TDGS +IMLFS +GK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFAKVRANGLIAVNLREDDSLIGVDITDGSSEIMLFSKAGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VR MGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT++ EY +R
Sbjct: 708 EQVRGMGRTASGVRGMKLSGEDQVVSLIVPSNEG-DILTVTQNGYGKRTVLSEYPAKSRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A E M+IT G L+RTRVSE+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGSVVGAVQAEDGDEFMMITDAGTLVRTRVSEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ +QR+
Sbjct: 827 SENENVVALQRI 838
>gi|323494793|ref|ZP_08099892.1| DNA gyrase subunit A [Vibrio brasiliensis LMG 20546]
gi|323310986|gb|EGA64151.1| DNA gyrase subunit A [Vibrio brasiliensis LMG 20546]
Length = 876
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/852 (54%), Positives = 631/852 (74%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIEA-DKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKAR+ AHILEGL +AL NID I++IR+ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIYELRKARDRAHILEGLALALANIDEIIELIRNAPTPAEAKAGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + I Q Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPDWLEEQYGIRDGQ----YFLTETQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I +EL ++ +G + RR+EI + + E+
Sbjct: 476 EYKALLDEIAELMHILASTERLMEVIREELESVREAFG----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPIIN+ L+ E+IT ILP+S +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIINILPLEEGERITAILPVS----EFSPEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +TDG DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIAVNLRDDDSLIGVDITDGQSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLADDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ + G+QR+
Sbjct: 827 ADDENVVGLQRI 838
>gi|343503215|ref|ZP_08741043.1| DNA gyrase subunit A [Vibrio tubiashii ATCC 19109]
gi|418481682|ref|ZP_13050709.1| DNA gyrase subunit A [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342812150|gb|EGU47164.1| DNA gyrase subunit A [Vibrio tubiashii ATCC 19109]
gi|384570700|gb|EIF01259.1| DNA gyrase subunit A [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 875
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/849 (53%), Positives = 633/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++N +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAYINNEAITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADIET-DKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + + + Y L++ QAQ IL++ L RLT +E +KI+++Y+
Sbjct: 420 ASMLERAGTDAARPEWLEDQYGIHDG-QYFLTETQAQAILELRLHRLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++++R++E+I +EL +++ +G + RR+EI + + E+LIA
Sbjct: 479 ALLDEIAELMHILASTERLMEVIREELEAVRDGFG----DARRTEITAASHDIDMEELIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS
Sbjct: 535 REDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILCFST 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ Y LKV+Q+PQ SR +RGKPI+N+ L+ E+IT ILP+ +F ++ ++FM+T
Sbjct: 595 RGKTYRLKVYQLPQASRTARGKPIVNILPLEEGERITAILPVD----EFSEDKFIFMATG 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRF E+ V
Sbjct: 651 DGTVKKTPLNQFANVRANGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFAEDKV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R T+G
Sbjct: 711 RAMGRTAAGVRGMKLAEDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 770 VVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAED 829
Query: 841 SKLCGVQRL 849
+ G+QR+
Sbjct: 830 ENVVGLQRI 838
>gi|392543535|ref|ZP_10290672.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
piscicida JCM 20779]
Length = 890
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/902 (52%), Positives = 644/902 (71%), Gaps = 38/902 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MSDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKVAHELLADLEKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L V+ NP+ +I +LI I PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAVIQNPDITIEELIDYILGPDFPTAAIISGKNGIEQAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + N+ II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YIRAKAEIEVDEKTNKETIIVHEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQLQ FG+NM+AL N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGEVGEVVLNNLYAQTQLQTVFGINMVALDNNQPKCFNLKEMLDAFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH LEGL IAL NID I++IR + TP EAK + W+L +V
Sbjct: 361 VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKAALTARAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ + +++ + +++ + Y LS+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 KSML--ERTGEENVARPDWLAEELGIRDGQYYLSEQQAQAILDLRLHKLTGLEHEKILAE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L ILS +R++E+I DEL IK YG RR+EI A + S EDL
Sbjct: 479 YKELLDLIAELLYILSTPERLMEVIRDELVEIKETYGDE----RRTEITAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP+S+Y AQ+RGG+G+ A KDED+I +L +ANTHD ILCF
Sbjct: 535 INEEDVVVTLSHEGYVKYQPLSDYEAQRRGGKGRSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ ++ M+
Sbjct: 595 STSGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITTILPV----REYEEDKFIVMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ GIVKKT L+ +S R SGIIA+NL+ D LIGA +T G DIMLF++ GK VRFNE
Sbjct: 651 TASGIVKKTPLTAYSRQRASGIIAINLNEGDSLIGANITTGENDIMLFTEHGKVVRFNEK 710
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+++ KV++L+V + ++LT T
Sbjct: 711 QRDSETGEVKRDPETGEEMLALRPMGRTATGVRGIKMPDDVKVVSLIVPQSDG-AILTVT 769
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT ++EY +R T+G++SIK +RNG VV A V+ EIMLI+ G L+RTR
Sbjct: 770 ENGYGKRTPLEEYPAKSRATQGVVSIKVTERNGSVVGAVQVDDNDEIMLISNRGTLVRTR 829
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIP---VITIDGPTASGKGTV 875
V+E+ +GR+TQGVILI + K+ G+QR+ +I + + +P V ++G G+
Sbjct: 830 VNEVSTVGRNTQGVILIRTMEEEKVVGLQRIEEIEV--EALPEGDVAELEGEATPDAGSD 887
Query: 876 AQ 877
A+
Sbjct: 888 AE 889
>gi|389807669|ref|ZP_10204206.1| DNA gyrase subunit A [Rhodanobacter thiooxydans LCS2]
gi|388443794|gb|EIL99929.1| DNA gyrase subunit A [Rhodanobacter thiooxydans LCS2]
Length = 871
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/850 (54%), Positives = 633/850 (74%), Gaps = 14/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKEVI + +E+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N++N
Sbjct: 1 MAELAKEVIRVNIEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNVYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD S+YDA+VR+AQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDQSVYDAIVRLAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++S+ELL D+DKET+DF NYD E EP VLPTR+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMSRLSHELLADIDKETVDFGPNYDESEHEPLVLPTRVPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI + ++ P SI+ L+ IP PDFPT GII G S + + Y TG+GR+
Sbjct: 181 NIPPHNLNEVIAATIALIDEPALSIDQLMHYIPGPDFPTHGIINGSSGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIE-EFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
++RAK IE E N R II+ ELPYQVNK L+EKI++LVKEKKLE IS LRDESDK
Sbjct: 241 LVRAKAEIETEPN--GRETIIVHELPYQVNKARLIEKIAELVKEKKLEGISELRDESDKD 298
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIE++++ + ++VLN L++QTQLQ TFG+NM+AL++GQPKLLNLK+IL FI HR+
Sbjct: 299 GMRVVIEIRKDAMGDVVLNNLFQQTQLQVTFGINMVALLDGQPKLLNLKDILEAFIRHRR 358
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRTIF+LRKAR AHILEGLT+AL NID I++I+++S+P EA+ +++ W
Sbjct: 359 EVVTRRTIFDLRKARARAHILEGLTVALANIDEMIELIKTSSSPAEARERMVVRRWEAGL 418
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + ++ L+ D Y+LS+ QA EIL M L RLT +EQ+K+ ++Y
Sbjct: 419 VRTLLSASGAGASRPEDMDPRDGLK-ADGYQLSEAQALEILAMRLHRLTGLEQEKLSDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+++ + L +IL N R++++I +EL IK ++G + RR+EI + + + DLI
Sbjct: 478 RQILETIRGLIEILENPDRLLQVIREELEAIKVEFG----DARRTEIQHSQEDLNVLDLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS+ GYIK QP S YRAQKRGG+G+ A KDED + QL++ NTHD +L F+
Sbjct: 534 APEDMVVTLSHTGYIKRQPASTYRAQKRGGKGRSASALKDEDVVEQLWVVNTHDTLLAFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YWLKV+QIP+ +RGKPIIN+ L + EK+ +LP+ R++ + +VF +T
Sbjct: 594 STGRVYWLKVYQIPEAGPGARGKPIINLLPLGDGEKVQAVLPI----REYSDDRFVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT LS F+ + G +A+ L+++D L+ LTDG+ DI+LF+ +GK RF+EN+
Sbjct: 650 KHGTVKKTPLSEFAFQLQKGKLAIKLNDDDALVNVELTDGNSDILLFASNGKVNRFDENT 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR+MGR+A GV GM+L + +V++L+V+ + +LTATE GYGKRT + E+TK RGT+
Sbjct: 710 VRSMGRTATGVRGMKLAEGAQVVSLIVA--AEGDILTATERGYGKRTQLAEFTKKGRGTQ 767
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I I+ ++RNG +VAA V+ HE+MLI+ G L+RTRV+E+ ++GR+TQGV LI +
Sbjct: 768 GVIGIQCSERNGALVAAVQVSEAHELMLISDKGTLVRTRVAEVSQLGRNTQGVTLIRLPA 827
Query: 840 KSKLCGVQRL 849
L V RL
Sbjct: 828 DETLVSVMRL 837
>gi|365835782|ref|ZP_09377193.1| DNA gyrase, A subunit [Hafnia alvei ATCC 51873]
gi|364565338|gb|EHM43067.1| DNA gyrase, A subunit [Hafnia alvei ATCC 51873]
Length = 882
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/851 (53%), Positives = 629/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P+VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + ++ L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVINGCLAYIDDENITVEGLMQHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R II+ E+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 YIRAKAEVEADEKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL GQPKLL LK+ L F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNHLYSLTQMQVTFGINMVALHQGQPKLLTLKDCLQAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL+NID I++IR P EAK ++ W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALSNIDPIIELIRHAPNPAEAKALLVARGWVLGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ N + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDNAARPEWLEPQFGIRDGHYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ L IL + R++E+I +EL +++++G + RR+EI N + + EDLI+
Sbjct: 480 ELLEQIAALIFILESPDRLMEVIREELIAVRDQFG----DARRTEITENTADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIINLLPLEANERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIAVNL+ D LIG LTDGS ++MLFS +GK VRF E+ V
Sbjct: 652 SGTVKKTALTDFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAAGKVVRFPESQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + +V++L++ + +LT TENGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLNGEDRVVSLIIPRGEG-DILTVTENGYGKRTGVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGNVVGAVQVDACDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 EHVVGLQRVAE 841
>gi|254492429|ref|ZP_05105601.1| DNA gyrase, A subunit [Methylophaga thiooxidans DMS010]
gi|224462321|gb|EEF78598.1| DNA gyrase, A subunit [Methylophaga thiooxydans DMS010]
Length = 859
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/851 (53%), Positives = 623/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A E+ SI +E EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSEIALELDSIGIETEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNSWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGDS AAM
Sbjct: 61 SPYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQPFSMRYMLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DL+KET+DFI+NYD E EPSVLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKITHEMLADLEKETVDFIANYDESEHEPSVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++ + ++ NPE I +L++ IP PDFPT+ II G + + Y TG+GRV
Sbjct: 181 NIPPHNLTEVLNAAIAMIDNPEIGIPELMEHIPGPDFPTSAIINGARGIAEAYATGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + + +I+++ELPYQVNK LLEKI++LVKEKK++ I+ LRDESDK G
Sbjct: 241 HIRARADIETNDATGQQSIVVNELPYQVNKARLLEKIAELVKEKKIDGITALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VI L+R E+PE+VLN LY+QTQ+Q FG+NM+A+V+GQP+ LNLK++L FI HR+E
Sbjct: 301 MRMVIVLRRGEVPEVVLNNLYQQTQMQTVFGINMVAIVDGQPRTLNLKDVLAAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR+IF+LRKAR+ AHILEGL AL NID I++I+++ P EAK ++ W +
Sbjct: 361 VVTRRSIFDLRKARDRAHILEGLATALANIDEVIELIKASPNPAEAKEALLSRGWASEMI 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++G + + L + +Y LS QAQ IL M L RLT +EQ KI+ +Y
Sbjct: 421 LEMLGEAGAEASRPEDLEAEFGLVDK-LYHLSPAQAQAILDMRLHRLTGLEQDKILQEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
V+ + +L ILS+ ++ +I DEL I +YG RR+EI+ N ++ + EDLI
Sbjct: 480 EVLDLIGELLAILSDPDNLMAVIRDELVAINAEYGDE----RRTEILANHLDLTLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
++MV+TLS+ GY K+Q + Y+AQKRGG+GK A KDED+I LFIANTHD +LCFS+
Sbjct: 536 EEEMVVTLSHAGYAKTQQLDTYQAQKRGGKGKAATSMKDEDFIEHLFIANTHDTLLCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YW KV+++PQG R +RGKPI+N+ L+ E+I +L + R+F + ++FM+T+
Sbjct: 596 TGKVYWKKVYELPQGGRTARGKPIVNLLPLEEGERINAVLSI----REFEADKFIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L ++S PR +GIIAV+L ++D L+ A+TDG DIMLFS +GK +RF E V
Sbjct: 652 SGTVKKTPLVDYSRPRANGIIAVDLKDDDQLVDVAVTDGMSDIMLFSSTGKVIRFPEADV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR +RGV GMR+ +K+I+L+++ ++ ++LTATE GYGKRT + EY RG +G
Sbjct: 712 RSMGRVSRGVRGMRIADNEKIISLIIA-QEEGAILTATEFGYGKRTNLAEYRVQGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
IISI+T+ RNG VV A V +IMLIT GG L+RT V ++ +GR+TQGV LI +
Sbjct: 771 IISIQTSDRNGSVVGAVQVCDEDQIMLITNGGTLVRTPVKDVSLVGRNTQGVRLINLSKN 830
Query: 841 SKLCGVQRLCK 851
KL GV+R+ +
Sbjct: 831 EKLVGVERVLE 841
>gi|269963959|ref|ZP_06178268.1| DNA gyrase, subunit A [Vibrio harveyi 1DA3]
gi|269831302|gb|EEZ85452.1| DNA gyrase, subunit A [Vibrio harveyi 1DA3]
Length = 879
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/849 (53%), Positives = 632/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAFINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ +Y L++ QAQ IL++ L RLT +E +KI+++Y+
Sbjct: 420 ASMLERAGTDAARPEWLEDQYGIRDG-LYYLTETQAQAILELRLHRLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++++R++E+I +EL +++ YG ++RR+EI + E+LIA
Sbjct: 479 ALLDEIAELMHILASTERLMEVIREELEAVRDGYG----DVRRTEITAATHDIDMEELIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS
Sbjct: 535 REDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILCFST 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ Y LKV+Q+P +R +RGKPI+N+ L+ E+IT ILP+ +F ++FM+T
Sbjct: 595 RGKTYRLKVYQLPHATRTARGKPIVNILPLEEGERITAILPVD----EFSPEKFIFMATG 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRF+E+ V
Sbjct: 651 DGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFSEDKV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R T+G
Sbjct: 711 RAMGRTAAGVRGMKLADEDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 770 VVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAED 829
Query: 841 SKLCGVQRL 849
+ G+QR+
Sbjct: 830 ESVVGLQRI 838
>gi|399544562|ref|YP_006557870.1| DNA gyrase subunit A [Marinobacter sp. BSs20148]
gi|399159894|gb|AFP30457.1| DNA gyrase subunit A [Marinobacter sp. BSs20148]
Length = 895
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/852 (53%), Positives = 631/852 (74%), Gaps = 11/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM +NN WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYPLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL DLDKET+DF+ NYDG E+ P V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMKKIAHSLLADLDKETVDFVPNYDGTEQIPVVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ +P+ SI+ L++ IP PDFPT GII G + + + Y TG+GRV
Sbjct: 181 NIPPHNLTEVVKGCLALIDDPDLSIDQLMEFIPGPDFPTEGIINGRAGIVEAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R A+II ELPYQ+NK L+EKI++LVKEK+LE I+ LRDES+K G
Sbjct: 241 YIRARHEVEHDAKTKRDAVIITELPYQLNKSRLIEKIAELVKEKRLEGITELRDESNKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E P++++N L+KQTQL+ FG+NM+AL++G+P++LNLKE+L FI HR+E
Sbjct: 301 IRVVIELRRGENPDVIINNLFKQTQLETVFGINMVALIDGEPRILNLKEMLDAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL +AL NID I +I+++ + EAK K+I W DV
Sbjct: 361 VVTRRTIFELRKARERGHILEGLAVALANIDEIIALIKASPSAAEAKEKLIAQGWGSEDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ ++ + I L+N Y LS QAQ IL + L RLT +E +K+ N+Y
Sbjct: 421 MAMLEHAGEDACRPDDLPEIYGLRNGK-YHLSPEQAQAILDLRLHRLTGLETEKLQNEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ DL DIL N +R++++I DEL I ++G RR+EI + + + DLI
Sbjct: 480 EILERIADLLDILGNPERLMQVIRDELQAIVEEFGDE----RRTEITSSRRDLTVADLID 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++V+T+S+ GY K+Q + +Y+AQ+RGGRGK A KDED++ +L +AN+HD ILCFSN
Sbjct: 536 EEELVVTISHSGYAKTQAVEDYQAQRRGGRGKAATSMKDEDFVEKLLVANSHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWL+V++IP+ SR SRG+P++N+ L E+IT LP+ RD+P++ +V M+TS
Sbjct: 596 RGKVYWLRVFEIPRASRASRGRPMVNILPLDEGERITTFLPV----RDYPEDQFVLMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L NFS PR SG+IA++L D LIGAA+TDGS +IMLFS +GKAVRF E +V
Sbjct: 652 AGVVKKTPLPNFSRPRSSGLIALSLDEGDTLIGAAITDGSAEIMLFSTAGKAVRFKEEAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R M R+ARGV G+R+ + V++L++ + +L A+E+GYGKRT + E+ + RG++G
Sbjct: 712 RPMSRTARGVRGIRMAEGHHVVSLIIPQDNA-VLLMASEHGYGKRTNLDEFPTYGRGSQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV-EN 839
+I+++ + RNG +V A + E+MLI+ G L+RTR E+ + R+TQGV LI + +
Sbjct: 771 VIAMQCSDRNGNLVTALQLFDGDEMMLISDKGTLVRTRTDEVSVLSRNTQGVRLIKLSQE 830
Query: 840 KSKLCGVQRLCK 851
+L GV+R+ +
Sbjct: 831 DERLVGVERIAE 842
>gi|395235308|ref|ZP_10413523.1| DNA gyrase subunit A [Enterobacter sp. Ag1]
gi|394730204|gb|EJF30096.1| DNA gyrase subunit A [Enterobacter sp. Ag1]
Length = 878
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/876 (52%), Positives = 643/876 (73%), Gaps = 13/876 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G L + + S+ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNITEVINGCLAYIEDENISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR++ EAK ++ +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRNSPNAAEAKASLVARSWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGIRDGK-YFLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL +++R++E+I +EL +++++G + RR+EI N + + EDLI
Sbjct: 480 ELLEQIAELLHILGSAERLMEVIREELEAMRDQFGDN----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD IL FS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILLFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----REYAEGINVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIAVNL+ D LIG LT+GS + MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTDFSRPRSAGIIAVNLNEGDELIGVDLTNGSDEAMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G++L KV++L++ ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RTMGRTATGVRGIKLAGDDKVVSLIIPRGDG-AILTVTQNGYGKRTAAAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V +IM+IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVEDTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ G+QR+ + ++ + +IDG A G +A
Sbjct: 831 ESVVGLQRVAEPVDDEE---LDSIDGSVAEGDDDIA 863
>gi|212556769|gb|ACJ29223.1| DNA gyrase, subunit A [Shewanella piezotolerans WP3]
Length = 897
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/872 (53%), Positives = 628/872 (72%), Gaps = 31/872 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R L+DGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYPLIDGQGNFGSVDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E P+VLPTRIP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKVAHQLLADLEKETVDFVPNYDGTEFIPAVLPTRIPTLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI G L ++ +P SI L++ IP PDFPTA I+ G + D Y TG+GR
Sbjct: 181 NIPPHNLTEVIAGCLALIEDPALSIEQLMEHIPGPDFPTAAIVNGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ +E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 VMRARADVETEDN-GRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP EAK K++ W L V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPAEAKVKLVAQGWELGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + +++N Y L++ QAQ IL++ L RLT +E KII +YE
Sbjct: 420 KGMLEKAGDDAARPEWLEPEFGIRDNK-YFLTEQQAQAILELRLHRLTGLEHDKIIAEYE 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + L ILS+ +R++E+IT+EL+ + +G RR+ I N ++ S EDLI
Sbjct: 479 ELLEVIAALLLILSSPQRLMEVITEELHEVLENFGDK----RRTVINANEVDMSLEDLIN 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+LGY K Q +S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCFS+
Sbjct: 535 EEDVVVTLSHLGYAKYQALSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSD 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G++YWLKV+Q+P SR +RG+PI+N+ L E+IT ILP+ R++ + Y+ M+TS
Sbjct: 595 FGKMYWLKVYQLPLASRTARGRPIVNLLPLSEGERITAILPV----REYADDKYIIMATS 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT L+ +SNPR +GIIAVNL + D LIG +TDG+ DIMLFS+ GK VRFNE
Sbjct: 651 HGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITDGNDDIMLFSNEGKVVRFNEKAR 710
Query: 719 ------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATEN 760
++RAMGR+A GV G++LE Q V++L+V + ++LT TEN
Sbjct: 711 NAETGEVKIDPETGEEVIALRAMGRTATGVRGIKLEDGQTVVSLIVP-KEDGAILTVTEN 769
Query: 761 GYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVS 820
GYGKRT + EY +RGTKG++SIK ++RNG VV A V EIMLI+ G L+RT +
Sbjct: 770 GYGKRTALSEYPAKSRGTKGVVSIKVSERNGAVVGAVQVGDNDEIMLISDKGTLVRTPAT 829
Query: 821 EIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ +GR+TQGV +I K+ G+QR+ +I
Sbjct: 830 GVSSIGRNTQGVTIIRTAEDEKVVGLQRIDEI 861
>gi|157961888|ref|YP_001501922.1| DNA gyrase subunit A [Shewanella pealeana ATCC 700345]
gi|157846888|gb|ABV87387.1| DNA gyrase, A subunit [Shewanella pealeana ATCC 700345]
Length = 903
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/876 (53%), Positives = 626/876 (71%), Gaps = 36/876 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R L+DGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYPLIDGQGNFGSVDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E P+VLPTRIP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKVAHQLLADLEKETVDFVPNYDGTEFIPAVLPTRIPTLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G L ++ +P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 181 NIPPHNLNEVISGCLALIEDPALSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ IEE N R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 VMRARAEIEEEN--GRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 298
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 299 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 358
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP EAK K++ W L V
Sbjct: 359 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPAEAKVKLVAEGWELGHV 418
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + +D Y L++ QAQ IL++ L RLT +E KII +
Sbjct: 419 K---GMLEKAGDDAARPEWLEPEFGIRDDKYYLTEQQAQAILELRLHRLTGLEHDKIIAE 475
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+I +EL + +G RR+ I N ++ S EDL
Sbjct: 476 YEELLEIIAALLFILGSPERLMEVIKEELEEVLTNFGDE----RRTVINANEVDMSLEDL 531
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K Q +S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 532 INEEDVVVTLSHLGYAKYQVLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 591
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR +RG+PI+N+ L E+IT ILP+ R++ ++ Y+ M+
Sbjct: 592 SDFGKMYWLKVYQLPLASRTARGRPIVNLLPLAEGERITAILPV----REYAEDKYIIMA 647
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L+ +SNPR +GIIAVNL + D LIG +TDG+ DIMLFS+ GK VRFNE
Sbjct: 648 TSHGTVKKTALTAYSNPRVNGIIAVNLKDGDQLIGVDITDGNDDIMLFSNEGKVVRFNEK 707
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++RAMGR+A GV G++LE Q V++L+V + +LT T
Sbjct: 708 ARSSETGEVKIDPETGEEVIALRAMGRTATGVRGIKLEDGQTVVSLIVPKGEG-DILTVT 766
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT + EY +RGTKG++SIK ++RNG VV A V EIMLI+ G L+RT
Sbjct: 767 ENGYGKRTDLAEYPAKSRGTKGVVSIKVSERNGAVVGAVQVGENDEIMLISNKGTLVRTP 826
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITM 854
+ + +GR+TQGV +I K+ G+QR+ +I +
Sbjct: 827 ATGVSSIGRNTQGVTIIRTAEDEKVVGLQRIDEIQV 862
>gi|126668593|ref|ZP_01739546.1| DNA gyrase, A subunit [Marinobacter sp. ELB17]
gi|126626923|gb|EAZ97567.1| DNA gyrase, A subunit [Marinobacter sp. ELB17]
Length = 895
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/852 (53%), Positives = 631/852 (74%), Gaps = 11/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM +NN WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYPLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL DLDKET+DF+ NYDG E+ P V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMKKIAHSLLADLDKETVDFVPNYDGTEQIPVVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ +P+ SI+ L++ IP PDFPT GII G + + + Y TG+GRV
Sbjct: 181 NIPPHNLTEVVKGCLALIDDPDLSIDQLMEFIPGPDFPTEGIINGRAGIVEAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R A+II ELPYQ+NK L+EKI++LVKEK+LE I+ LRDES+K G
Sbjct: 241 YIRARHEVEHDAKTKRDAVIITELPYQLNKSRLIEKIAELVKEKRLEGITELRDESNKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E P++++N L+KQTQL+ FG+NM+AL++G+P++LNLKE+L FI HR+E
Sbjct: 301 IRVVIELRRGENPDVIINNLFKQTQLETVFGINMVALIDGEPRILNLKEMLDAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL +AL NID I +I+++ + EAK K+I W DV
Sbjct: 361 VVTRRTIFELRKARERGHILEGLAVALANIDEIIALIKASPSAAEAKEKLIAQGWGSEDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ ++ + I L+N Y LS QAQ IL + L RLT +E +K+ N+Y
Sbjct: 421 MAMLERAGEDACRPDDLPEIYGLRNGK-YHLSPEQAQAILDLRLHRLTGLETEKLQNEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ DL DIL N +R++++I DEL I ++G RR+EI + + + DLI
Sbjct: 480 EILERIADLLDILGNPERLMQVIRDELQAIVEEFGDE----RRTEITSSRRDLTVADLID 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++V+T+S+ GY K+Q + +Y+AQ+RGGRGK A KDED++ +L +AN+HD ILCFSN
Sbjct: 536 EEELVVTISHSGYAKTQAVEDYQAQRRGGRGKAATSMKDEDFVEKLLVANSHDTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWL+V++IP+ SR SRG+P++N+ L E+IT LP+ RD+P++ +V M+TS
Sbjct: 596 RGKVYWLRVFEIPRASRASRGRPMVNILPLDEGERITTFLPV----RDYPEDQFVLMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L NFS PR SG+IA++L D LIGAA+TDGS +IMLFS +GKAVRF E +V
Sbjct: 652 AGVVKKTPLPNFSRPRSSGLIALSLDEGDTLIGAAITDGSAEIMLFSTAGKAVRFKEEAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R M R+ARGV G+R+ + V++L++ + +L A+E+GYGKRT + E+ + RG++G
Sbjct: 712 RPMSRTARGVRGIRMAEGHHVVSLIIPQDDA-VLLMASEHGYGKRTNLNEFPTYGRGSQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV-EN 839
+I+++ + RNG +V A + E+MLI+ G L+RTR E+ + R+TQGV LI + +
Sbjct: 771 VIAMQCSDRNGNLVTALQLFDGDEMMLISDKGTLVRTRTDEVSVLSRNTQGVRLIKLSQE 830
Query: 840 KSKLCGVQRLCK 851
+L GV+R+ +
Sbjct: 831 DERLVGVERIAE 842
>gi|377576521|ref|ZP_09805505.1| DNA gyrase subunit A [Escherichia hermannii NBRC 105704]
gi|377542553|dbj|GAB50670.1| DNA gyrase subunit A [Escherichia hermannii NBRC 105704]
Length = 878
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/871 (53%), Positives = 633/871 (72%), Gaps = 13/871 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI L + + + S+ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVISACLAYIEDEDISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++ LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLIAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 KAMLEGAGDDAARPEWLEPEFGIRDGK-YWLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL ++++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLTQIAELLHILGSADRLMEVIREELELVRDQFGDK----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYAEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIAVNL+ D LIG LT S ++MLFS GK VRF +++V
Sbjct: 652 SGTVKKTALKEFSRPRTAGIIAVNLNEGDELIGVDLTSASDEVMLFSAQGKVVRFKDDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+RL V++L+V + ++LT T+NGYGKRT EY +R TKG
Sbjct: 712 RPMGRTATGVRGIRLMDGDSVVSLIVPRGEG-AILTVTQNGYGKRTAADEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTDRNGPVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
+ G+QR+ + ++ + +IDG A G
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDSIDGTVAEG 858
>gi|90581243|ref|ZP_01237041.1| putative DNA topoisomerase (ATP-hydrolyzing) [Photobacterium
angustum S14]
gi|90437614|gb|EAS62807.1| putative DNA topoisomerase (ATP-hydrolyzing) [Vibrio angustum S14]
Length = 887
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/860 (54%), Positives = 629/860 (73%), Gaps = 22/860 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPINIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L +++ + +I+ L++ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVINGCLAYINDEDITIDQLMEYIPGPDFPTAALISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E + + I++ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRAKAEI-EVEKNGKETIVVHEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPK+ NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKIFNLKEMLKCFVNHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKAR+ AHILEGL +AL NID I++IR TP EAK +I W+L +V
Sbjct: 360 VVTRRTIYELRKARDRAHILEGLALALANIDEIIELIRRAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++N Y L++ QAQ IL + L +LT +E +KI+ +Y+
Sbjct: 420 AAMLERAGTDAARPEWLEEQFGIRDNQYY-LTEQQAQAILDLRLHKLTGLEHEKILEEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L ILS+S+R++E+I +EL ++K ++ RR+EI + + EDLI
Sbjct: 479 ALLDEIAELMYILSSSERLMEVIREELELVKEQFNDE----RRTEITAASHDIDMEDLIT 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQVLSDYEAQRRGGKGKAATRMKEEDFIERLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ +VFM+T+
Sbjct: 595 RGRMYWLKVYQLPLASRTARGKPIVNILPLEENERITAILPV----REYTEDKFVFMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT L++FS PR +GIIAVNL D LIG +TDG DIMLFS GK VRF E+
Sbjct: 651 DGTVKKTPLTDFSRPRSAGIIAVNLREGDSLIGVDVTDGDCDIMLFSAFGKVVRFYESPV 710
Query: 719 ---------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIK 769
VR MGR+A GV G++L + KVI+L+V +N VLT TENGYGKRT +
Sbjct: 711 IDAEGNAKGGVRGMGRTAAGVRGIKLAEGDKVISLIVPHNDG-DVLTVTENGYGKRTELA 769
Query: 770 EYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRST 829
EY +R T+G++SIK ++RNG+VV A E M+IT G L+RTRVSE+ ++GR+T
Sbjct: 770 EYPAKSRATQGVVSIKVSERNGRVVGAVQAEDGDEFMMITNAGTLVRTRVSEVSRVGRNT 829
Query: 830 QGVILITVENKSKLCGVQRL 849
QGV LI K+ G+QR+
Sbjct: 830 QGVTLIRTTEGEKVVGLQRI 849
>gi|424033313|ref|ZP_17772727.1| DNA gyrase, A subunit [Vibrio cholerae HENC-01]
gi|408874895|gb|EKM14060.1| DNA gyrase, A subunit [Vibrio cholerae HENC-01]
Length = 879
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/849 (53%), Positives = 630/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ +Y L++ QAQ IL++ L RLT +E +KI+++Y+
Sbjct: 420 ASMLERAGTDAARPEWLEDQYGIRDG-LYYLTETQAQAILELRLHRLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++++R++E+I +EL +++ YG RR+EI + + E+LIA
Sbjct: 479 ALLDEIAELMHILASTERLMEVIREELEAVRDGYGDE----RRTEITAASHDIDMEELIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS
Sbjct: 535 REDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILCFST 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ Y LKV+Q+P +R +RGKPI+N+ L+ E+IT ILP+ +F ++FM+T
Sbjct: 595 RGKTYRLKVYQLPHATRTARGKPIVNILPLEEGERITAILPVD----EFSPEKFIFMATG 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+N R +G+IAVNL ++D LIG +T GS DIMLFS +GK VRF+E+ V
Sbjct: 651 DGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITTGSSDIMLFSKAGKVVRFSEDKV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV GM+L +V++L+V +N+ +LT T+NGYGKRT + EY R T+G
Sbjct: 711 RAMGRTAAGVRGMKLADDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 770 VVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAED 829
Query: 841 SKLCGVQRL 849
+ G+QR+
Sbjct: 830 ESVVGLQRI 838
>gi|424046717|ref|ZP_17784279.1| DNA gyrase, A subunit [Vibrio cholerae HENC-03]
gi|408884777|gb|EKM23505.1| DNA gyrase, A subunit [Vibrio cholerae HENC-03]
Length = 879
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/849 (53%), Positives = 631/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAFINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ +Y L++ QAQ IL++ L RLT +E +KI+++Y+
Sbjct: 420 ASMLERAGTDAARPEWLEDQYGIRDG-LYYLTETQAQAILELRLHRLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++++R++E+I +EL +++ YG + RR+EI + E+LIA
Sbjct: 479 ALLDEIAELMHILASTERLMEVIREELEAVRDGYG----DARRTEITAATHDIDMEELIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS
Sbjct: 535 REDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILCFST 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ Y LKV+Q+P +R +RGKPI+N+ L+ E+IT ILP+ +F ++FM+T
Sbjct: 595 RGKTYRLKVYQLPHATRTARGKPIVNILPLEEGERITAILPVD----EFSPEKFIFMATG 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRF+E+ V
Sbjct: 651 DGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFSEDKV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R T+G
Sbjct: 711 RAMGRTAAGVRGMKLADEDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 770 VVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAED 829
Query: 841 SKLCGVQRL 849
+ G+QR+
Sbjct: 830 ESVVGLQRI 838
>gi|153835279|ref|ZP_01987946.1| DNA gyrase, A subunit [Vibrio harveyi HY01]
gi|444425509|ref|ZP_21220948.1| DNA gyrase subunit A [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|148868215|gb|EDL67361.1| DNA gyrase, A subunit [Vibrio harveyi HY01]
gi|444241240|gb|ELU52767.1| DNA gyrase subunit A [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 879
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/849 (53%), Positives = 631/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAFINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ +Y L++ QAQ IL++ L RLT +E +KI+++Y+
Sbjct: 420 ASMLERAGTDAARPEWLEDQYGIRDG-LYYLTETQAQAILELRLHRLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++++R++E+I +EL +++ YG + RR+EI + E+LIA
Sbjct: 479 ALLDEIAELMHILASTERLMEVIREELEAVRDGYG----DARRTEITAATHDIDMEELIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS
Sbjct: 535 REDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILCFST 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ Y LKV+Q+P +R +RGKPI+N+ L+ E+IT ILP+ +F ++FM+T
Sbjct: 595 RGKTYRLKVYQLPHATRTARGKPIVNILPLEEGERITAILPVD----EFSPEKFIFMATG 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRF+E+ V
Sbjct: 651 DGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFSEDKV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R T+G
Sbjct: 711 RAMGRTAAGVRGMKLADEDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 770 VVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAED 829
Query: 841 SKLCGVQRL 849
+ G+QR+
Sbjct: 830 ESVVGLQRI 838
>gi|59711811|ref|YP_204587.1| DNA gyrase subunit A [Vibrio fischeri ES114]
gi|59479912|gb|AAW85699.1| DNA gyrase (type II topoisomerase), subunit A [Vibrio fischeri
ES114]
Length = 878
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/852 (54%), Positives = 628/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMDVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + N E +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLTEVVNGCLAFIENEEITIDELMNYIPGPDFPTAALISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K +IE ++ + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKANIEA-DKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYSLTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL +AL NID I++I++ TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARDRAHILEGLALALANIDEIIELIKNAPTPAEAKEGLISRGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I + + Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPDWLEPEFGIREGK----YFLTEQQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I DEL ++++ YG RR+EI + ED
Sbjct: 476 EYKALLDEIAELMHILASTERLMEVIRDELVMVRDMYGDE----RRTEIGAAIHDIDMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LITQEDVVVTLSREGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+PQ SR +RGKPI+N+ L+ E+IT ILP+S ++ ++ ++FM
Sbjct: 592 FSTRGKAYSLKVFQLPQASRTARGKPIVNILPLEEGERITAILPVS----EYSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+ R +G+IAVNL +D LIG +TDGS +IMLFS +GK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFAKVRANGLIAVNLREDDSLIGVDITDGSSEIMLFSKAGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VR MGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT++ EY +R
Sbjct: 708 EQVRGMGRTASGVRGMKLSGEDQVVSLIVPSNEG-DILTVTQNGYGKRTVLSEYPAKSRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A E M+IT G L+RTRVSE+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGSVVGAVQAEDGDEFMMITDAGTLVRTRVSEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ +QR+
Sbjct: 827 SENENVVALQRI 838
>gi|187931170|ref|YP_001891154.1| DNA gyrase subunit A [Francisella tularensis subsp. mediasiatica
FSC147]
gi|187712079|gb|ACD30376.1| DNA gyrase, A subunit [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 868
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/848 (55%), Positives = 627/848 (73%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIITKESSSINIEKELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ NP +I +LI+ IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTIALIDNPNLTIEELIEYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E + II+ E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKAQIIVTEIPYQVNKAKLVEKIAELVKDKKVAGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIELIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q + Y L++ QA IL + L RLT +EQ KI+N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQVDSSYNLTEEQADAILALRLHRLTGLEQDKIVNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I ++ L ILS+ K +I ++ DEL I++ YG R+SEII + ++ + EDLI
Sbjct: 480 KELIDRIKYLISILSDIKELIRVVKDELVEIRDNYGDQ----RKSEIIESRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 AEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L+ E+IT ++P+S F + YVFM+T
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLEKDERITAMMPISQ----FNEGWYVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDG+ IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHHNQKIVSVIVTNPDEGIVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV +I++IT G L+RT E+R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAALVENDEDIVMITDNGTLVRTSSDEVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 106/205 (51%), Gaps = 14/205 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + + + I+ FS+ G+
Sbjct: 647 VFMATKLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHHNQKIVSVI-VTN-----PDEGIVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ AAL + DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAALVENDEDIVMITDNGTLVRTSSDEVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLV 746
GRSA+GV + L +K+I+L V
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKV 840
>gi|392547445|ref|ZP_10294582.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
rubra ATCC 29570]
Length = 887
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/874 (54%), Positives = 632/874 (72%), Gaps = 33/874 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELRNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DLDKET+D++ NYDG E+ P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMSHELLADLDKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L V+ NP+ +I++LI IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAVIQNPDITIDELIDYIPGPDFPTAAIINGKKGIEQAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + + II++E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YIRARAEIETDEKTGKETIIVNEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQLQ FG+NM+AL N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGEVGEVVLNNLYAQTQLQTVFGINMVALDNNQPKCFNLKEMLEAFIVHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+++LRKAR+ AH LEGL IAL NID I++IR + TP EAK + W L V
Sbjct: 361 VVTRRTVYDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKAALTSRPWELGSV 420
Query: 421 SKIIGFNKKNYNTISKINNI-SKLQNND-MYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ + +++ + + ++L D Y LS+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 RPML--ERAGEENVARPDWLDAELGIRDGQYYLSEQQAQAILDLRLHKLTGLEHEKILGE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L ILS+ R++E+I DEL IK YG RR+EI A + S EDL
Sbjct: 479 YQELLDLIAELLLILSSPDRLMEVIRDELAEIKENYGDE----RRTEISAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 INEEDVVVTLSHEGYVKYQPLSDYEAQRRGGKGKAATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ + + + +V M+
Sbjct: 595 STSGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITTILPV----KQYEDDKFVLMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G+VKKT L+ +S R SGIIA+NL++ D LIGA +TDG++DIMLF+D GK VRFNE
Sbjct: 651 TANGVVKKTPLTAYSRQRASGIIAINLNDGDNLIGADITDGNHDIMLFTDHGKVVRFNEK 710
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+++ KV++L+V N ++LT T
Sbjct: 711 LRDSETGEVKIDPETGEEMLALRPMGRTATGVRGIKMPDDVKVVSLIVPKNDG-AILTVT 769
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT ++EY +R T+G++SIK RNG+VV A V EIMLI+ G L+RTR
Sbjct: 770 ENGYGKRTPLEEYPAKSRATQGVVSIKVTDRNGRVVGAVQVQDNDEIMLISNRGTLVRTR 829
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
V+E+ +GR+TQGVILI + ++ G+QR+ +I
Sbjct: 830 VNEVSTVGRNTQGVILIRTVDDEQVVGLQRIEEI 863
>gi|336311381|ref|ZP_08566345.1| DNA gyrase subunit A [Shewanella sp. HN-41]
gi|335865184|gb|EGM70234.1| DNA gyrase subunit A [Shewanella sp. HN-41]
Length = 919
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/874 (54%), Positives = 627/874 (71%), Gaps = 35/874 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E+ P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDFVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 181 NIPPHNLTEVVKGCLALIAEPALSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA +E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 VMRALADVETEDN-GRERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP +AK K++E W L V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + + +Y L++ QAQ IL++ L RLT +E KII +
Sbjct: 420 Q---GMLEKAGDDAARPEWLEPQYGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIAE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+I +EL I +YG + RR+ I N I+ S EDL
Sbjct: 477 YEELLEFIAGLLFILRSPERLMEVIKEELEEILAEYG----DARRTVINANEIDMSLEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K QP+S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 533 INEEDVVVTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR +RG+PI+N+ L E+IT ILP+ R++ + Y+ M+
Sbjct: 593 SDFGKMYWLKVYQLPLASRTARGRPIVNLLPLAEGERITAILPV----REYAADKYIIMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L+ +SNPR +GIIAVNL + D LIG +T+G +IMLFS+ GK VRF E
Sbjct: 649 TSHGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFGEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
S+R MGR+A GV G++LE+ QKV++L+V ++LT T
Sbjct: 709 VRDSETGEVKLDPETGEEVLSLRPMGRTATGVRGIKLEEGQKVVSLIVPKGDG-AILTVT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT + EY +R TKG++SIK ++RNG VV A V EIMLI+ G L+RT
Sbjct: 768 ENGYGKRTQLSEYPAKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGTLVRTP 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ +GR+TQGV +I + K+ G+QR+ +I
Sbjct: 828 AKGVSIIGRNTQGVTIIRTASDEKVVGLQRIDEI 861
>gi|260772916|ref|ZP_05881832.1| DNA gyrase subunit A [Vibrio metschnikovii CIP 69.14]
gi|260612055|gb|EEX37258.1| DNA gyrase subunit A [Vibrio metschnikovii CIP 69.14]
Length = 893
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/863 (54%), Positives = 623/863 (72%), Gaps = 28/863 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+DF+ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + +I++L++ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYISNEDITIDELMEYIPGPDFPTAALISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE + + II+ E+PYQVNK L+EKI+ LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-EKNGKETIIVSEIPYQVNKARLIEKIADLVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE +R+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECRRDAVAEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVNHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL++AL NID I +IR TP EAK ++ W+L V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLSLALANIDEIIDLIRKAPTPAEAKMGLVSRGWDLGHV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + L RLT +E KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGIRDGQ----YFLTEQQAQAILDLRLHRLTGLEHGKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L ILSN++R++E+I +EL + ++ +G + RR+EI + + E+
Sbjct: 476 EYKALLDEIAELIHILSNTERLMEVIREELEMARDNFG----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +++Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQVLTDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L FSN R +G+IAVNL ++D LIG +TDG DIMLFS SGK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFSNVRANGLIAVNLRDDDSLIGVEITDGESDIMLFSKSGKVVRFNE 707
Query: 718 -----------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRT 766
VR MGR+A GV GM+L K +V++L+V +LT TENGYGKRT
Sbjct: 708 KPIVDDEGNVKGGVRPMGRTASGVRGMKLVKGDQVVSLIVPKTDG-DILTVTENGYGKRT 766
Query: 767 LIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMG 826
+ EY +R T+G++SIK ++RNGKVV A + E M+IT L+RTRVSE+ ++G
Sbjct: 767 QLSEYPAKSRATQGVVSIKVSERNGKVVGAVQADEGDEFMMITNAATLVRTRVSEVSQVG 826
Query: 827 RSTQGVILITVENKSKLCGVQRL 849
R+TQGV LI K+ G+QR+
Sbjct: 827 RNTQGVTLIRTSEGEKVVGLQRI 849
>gi|156975008|ref|YP_001445915.1| DNA gyrase subunit A [Vibrio harveyi ATCC BAA-1116]
gi|156526602|gb|ABU71688.1| hypothetical protein VIBHAR_02730 [Vibrio harveyi ATCC BAA-1116]
Length = 878
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/849 (53%), Positives = 630/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I+ L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAFINNEEITIDQLMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ +Y L++ QAQ IL++ L RLT +E +KI+++Y+
Sbjct: 420 ASMLERAGTDAARPEWLEDQYGIRDG-LYYLTETQAQAILELRLHRLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++++R++E+I +EL +++ YG + RR+EI + E+LIA
Sbjct: 479 ALLDEIAELMHILASTERLMEVIREELEAVRDGYG----DARRTEITAATHDIDMEELIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS
Sbjct: 535 REDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILCFST 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ Y LKV+Q+P +R +RGKPI+N+ L+ E+IT ILP+ +F ++FM+T
Sbjct: 595 RGKTYRLKVYQLPHATRTARGKPIVNILPLEEGERITAILPVD----EFSPEKFIFMATG 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRF+E+ V
Sbjct: 651 DGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFSEDKV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R T+G
Sbjct: 711 RAMGRTAAGVRGMKLADEDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 770 VVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAED 829
Query: 841 SKLCGVQRL 849
+ G+QR+
Sbjct: 830 ESVVGLQRI 838
>gi|429335746|ref|ZP_19216366.1| DNA gyrase subunit A [Pseudomonas putida CSV86]
gi|428759636|gb|EKX81930.1| DNA gyrase subunit A [Pseudomonas putida CSV86]
Length = 878
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/850 (52%), Positives = 634/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N E ++++L++ IP PDFPTAG+I G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNSEITVDELMQFIPGPDFPTAGLINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIGTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADSCRPENLDEQYGLRDGKYY-LSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS+++R++E+I +EL +I+ +YG + RR+EII ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSAERLMEVIREELELIRAEYG----DARRTEIIDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I+ L +AN+H +L FS
Sbjct: 536 PEEDRVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYISHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEHITTMLPVE----EYTEGHYIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L FS R G+IA+ L D LI AA+TDG ++MLFSD+GK RF E+
Sbjct: 652 ANGTVKKTPLEQFSRQRSVGLIALELDEGDILISAAITDGEREVMLFSDAGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++++ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLAEGQKLISMIIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNERNGRLVGAVQVQEGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|157375440|ref|YP_001474040.1| DNA topoisomerase [Shewanella sediminis HAW-EB3]
gi|157317814|gb|ABV36912.1| DNA topoisomerase (ATP-hydrolyzing) [Shewanella sediminis HAW-EB3]
Length = 904
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/874 (53%), Positives = 629/874 (71%), Gaps = 35/874 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R TLVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYTLVDGQGNFGSVDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E PSVLPTRIP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKVAHQLLADLEKETVDFVPNYDGTEFIPSVLPTRIPTLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EV+ G L ++ NP+ +IN+L++ IP PDFPTA II G + D Y+TG+GR
Sbjct: 181 NIPPHNINEVVSGCLALIENPDLTINELMEYIPGPDFPTAAIINGRKGIIDAYHTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK +E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 VMRAKADVETEDN-GRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVVEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILE L IAL NID I +I+++ TP EAK K+I W L V
Sbjct: 360 VVTRRTVFELRKARDRAHILESLAIALANIDPIIALIKASPTPAEAKVKLIAEGWELGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + + Y L++ QAQ IL + L +LT +E +KI+ +
Sbjct: 420 Q---GMLEKAGDDAARPEWLEPEYGIRDGRYYLTEQQAQAILDLRLHKLTGLEHEKILKE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+IT+EL + +G RR+ I N ++ S EDL
Sbjct: 477 YEELLEIIAALLYILRSPERLMEVITEELQEVLENFGDE----RRTVINANEVDMSLEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K Q +++Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 533 INEEDVVVTLSHLGYAKYQALTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR +RG+PI+N+ L E+IT ILP+ R++ + Y+ M+
Sbjct: 593 SDFGKMYWLKVYQLPLASRTARGRPIVNILPLSEGERITAILPV----REYADDKYIIMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L+ +SNPR +GIIAVNL + D LIG +T+G +IMLFSD+GK VRFNE
Sbjct: 649 TAHGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGEDEIMLFSDAGKVVRFNEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+RLE QKV++L+V + ++LT T
Sbjct: 709 VRDSETGQVKLDPETGEEVLALRPMGRTATGVRGIRLEDDQKVVSLIVPKDDG-AILTVT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT + EY +R TKG++SIK ++RNG VV A V EIMLI+ G L+RT
Sbjct: 768 ENGYGKRTDLSEYPAKSRATKGVVSIKISERNGAVVGAVQVGENDEIMLISDKGTLVRTP 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ + +GR+TQGV +I + K+ G+QR+ +I
Sbjct: 828 ATGVSSIGRNTQGVTIIRTAEEEKVVGLQRIDEI 861
>gi|334705035|ref|ZP_08520901.1| DNA gyrase, A subunit [Aeromonas caviae Ae398]
Length = 915
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/925 (51%), Positives = 644/925 (69%), Gaps = 56/925 (6%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPTLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N + +I++L+ + PDFPT GII G S + Y TG+G V
Sbjct: 181 NIPPHNLTEIVNGCLALIENGDLTIDELMIHVTGPDFPTGGIINGRSGIVQAYRTGRGSV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + +R II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E EIVLN LYK TQ+Q TFG+NM+AL N QPK++NLKEIL F+LHR+E
Sbjct: 301 MRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINMVALDNNQPKVMNLKEILDAFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL +AL NID I++IR ++TP +AK ++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAVALANIDPIIELIRHSATPADAKAALVAKGWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Q Y L++IQAQ IL + L +LT +E +KI+
Sbjct: 421 AAMLEKAGDDAARPEWLEPEFGIREGQ----YFLTEIQAQAILDLRLHKLTGLEHEKILE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y++++ + +L IL++ +R++E+I DEL ++ +YG RR+EI +++ + ED
Sbjct: 477 EYQSLLDLIAELLHILASPERLMEVIRDELLAVREQYGDE----RRTEISMSSAEINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED++ +L +ANTHD ILC
Sbjct: 533 LITPEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G++YWLKV+Q+P+ SR +RG+PIIN+ L E+IT ILP+ +++ + YVF
Sbjct: 593 FSTRGKVYWLKVYQLPEASRGARGRPIINLLPLDEGERITAILPV----KEYDADKYVFF 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS+FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRF E
Sbjct: 649 ATANGTVKKTSLSDFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFAE 708
Query: 718 NS--------------------------------------VRAMGRSARGVIGMRLEKKQ 739
S VR MGR+A GV G++L
Sbjct: 709 GSGRADADATDEVDTDDDAGNDDDGSDNGEGTESKGTFKGVRPMGRTAAGVRGIKLGAGD 768
Query: 740 KVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLV 799
KV++L+V ++LTATENGYGKRT + EY +RGT+G+ISIK ++RNGKV+ A V
Sbjct: 769 KVVSLIVPRGDG-AILTATENGYGKRTALDEYPTKSRGTQGVISIKVDERNGKVIDAIQV 827
Query: 800 NRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYI 859
+IMLIT GG L+RTRVSE+ +GR+T GV LI + G+QR+ + ++
Sbjct: 828 EDTDQIMLITNGGTLVRTRVSEVSVIGRNTGGVRLIRTGEDETVVGLQRVAESD--EEET 885
Query: 860 PVITIDGPTASGKGTVAQLVASKLG 884
+ ++G + G T A A G
Sbjct: 886 EALAVEGEVSEGTDTAADAGAVDTG 910
>gi|343512378|ref|ZP_08749510.1| DNA gyrase, A subunit [Vibrio scophthalmi LMG 19158]
gi|342795510|gb|EGU31230.1| DNA gyrase, A subunit [Vibrio scophthalmi LMG 19158]
Length = 886
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/855 (54%), Positives = 639/855 (74%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD+++Y+++VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDIAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+ ELL DL+KET+DF+ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAGELLTDLEKETVDFVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-ETEKNGRETIIVSEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL +GQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDHGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KARE AHILE L +AL NID I++IR+ +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELKKARERAHILEALALALANIDEIIELIRNAATPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 AAMLESAGNDAARPDWLEPEFGIRDGQ----YFLTETQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ YG + RR+EI + + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELELVREAYG----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+S +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILPVS----EFSADKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL ++D LIG +TDG DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITDGQSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GMRL + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMRLADEDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ +I
Sbjct: 827 AADENVVGLQRIDEI 841
>gi|374261872|ref|ZP_09620449.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
drancourtii LLAP12]
gi|363537716|gb|EHL31133.1| DNA gyrase, subunit A, type II topoisomerase [Legionella
drancourtii LLAP12]
Length = 871
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/852 (54%), Positives = 636/852 (74%), Gaps = 16/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MVYLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ LL DLDKET+DF NYD E P VLP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKVAHALLADLDKETVDFSPNYDETEFAPVVLPSRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++ + ++ NPE S++++++IIP PDFPTA II G + + GY TGKGRV
Sbjct: 181 NIPPHNLTEVVNACIALVDNPELSLDEIMEIIPGPDFPTAAIINGRAGIIQGYRTGKGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA+T IE NR AIII ELPYQVNK L+E+I++LV++KK+E IS LRDESDK G
Sbjct: 241 VIRARTEIETDKDTNRQAIIIHELPYQVNKARLVERIAELVRDKKIEGISGLRDESDKQG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIE+KRNE+ +++LN LY TQ+QN FG+NM+ALV+GQP+ LNLK+IL YFI HR+E
Sbjct: 301 MRVVIEIKRNEVADVILNNLYAHTQMQNVFGINMVALVDGQPRTLNLKQILEYFIKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KAR AH+LEGL IAL NID I +I+ + TPQ+AK ++ W V
Sbjct: 361 VVTRRTLFELKKARARAHLLEGLGIALANIDEMIALIKQSPTPQDAKEGLLAKAWQPGMV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++ G N + ++ +S + Y+LS QAQ IL++ L RLT +EQ KI+
Sbjct: 421 KSMLERAGSNASRPDDLAAEFGLS----DAGYRLSAAQAQAILELRLHRLTALEQDKILG 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
++E ++ + +L DIL++ +R++++I DEL IK ++G RR+EI + + + ED
Sbjct: 477 EFEELLILIKELLDILASPERLMQVIRDELLEIKTQFGDE----RRTEITASQEDLTIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +++V+TLS+ GY+K QP++ Y+AQ+RGG+GK A KDED++++L IA+THD +LC
Sbjct: 533 LITEENVVVTLSHQGYVKYQPLTAYQAQRRGGKGKSATNVKDEDFVSRLVIASTHDTLLC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FSN+G+LYWLK +Q+P SR SRG+PIIN+ L E+I +LP+ R++ + YVFM
Sbjct: 593 FSNHGKLYWLKAYQLPLASRISRGRPIINILPLAEGEEINAMLPV----REYQEGFYVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKK L+ FS PR +GIIAV+L D L+G +TDG+ DIMLF+D+GK +RF+E
Sbjct: 649 ATRNGTVKKVPLNAFSRPRSNGIIAVDLDENDRLVGVDITDGTRDIMLFTDAGKVIRFDE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR GR+ARGV G+R+E+ Q VI+L+V+ + ++LTATE+GYGKRT I EY RG
Sbjct: 709 SKVRPTGRTARGVRGIRIEEDQAVISLIVA-HPNGTILTATEHGYGKRTDIDEYRVSGRG 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+ISI+ +RNGKVV + VN E MLIT G L+R RVSE+ +GR+TQGV LI V
Sbjct: 768 GQGVISIQVTERNGKVVRSVQVNDSDEAMLITDKGTLVRFRVSELSIIGRNTQGVRLINV 827
Query: 838 ENKSKLCGVQRL 849
+ + G+Q++
Sbjct: 828 SSGELVVGMQKI 839
>gi|386823378|ref|ZP_10110528.1| DNA gyrase subunit A [Serratia plymuthica PRI-2C]
gi|386379716|gb|EIJ20503.1| DNA gyrase subunit A [Serratia plymuthica PRI-2C]
Length = 883
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/851 (54%), Positives = 624/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEVINGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YLRARAEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVVEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALHQGQPKLLNLKDILQAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 GAMLERAGDDAARPEWLEPEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N R++E+I +EL +K Y + RR+EI N + + EDLI
Sbjct: 480 ELLTFIAELIFILENPDRLMEVIREELMAVKELY----NDGRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS +GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + VI+L+V + +LT T+NGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLGEGDGVISLIVPRGEG-DILTVTQNGYGKRTAVTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG+VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGQVVGAVQVETTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|86148463|ref|ZP_01066753.1| DNA gyrase, subunit A [Vibrio sp. MED222]
gi|85833760|gb|EAQ51928.1| DNA gyrase, subunit A [Vibrio sp. MED222]
Length = 890
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/852 (53%), Positives = 630/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+++VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+ ELL DLDK+T+DF+ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAGELLTDLDKDTVDFVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L ++N + +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVVDGCLAFINNEDITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R++ IE + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSRAEIET-EKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L N+K++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYSQTQLQTTFGINMVALNNGQPQLFNIKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELKKARDRAHILEALSLALANIDEIIELIKNAPTPAEAKVGLVSRGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPDWLEDQYGIRDGQ----YFLTETQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ YG RR+EI + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELEAVRDIYGDE----RRTEITAAVHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLSN GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSNAGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+PQ SR +RGKPI+N+ L+ E+IT ILP+S +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPQASRTARGKPIVNILPLEEGERITAILPVS----EFSNEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +TDG+ DIMLFS SGK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIAVNLRDDDSLIGVDITDGNSDIMLFSKSGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR MGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRPMGRTASGVRGMKLPEDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK + RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSDRNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDENVVGLQRI 838
>gi|422017616|ref|ZP_16364181.1| DNA gyrase subunit A [Providencia alcalifaciens Dmel2]
gi|414105766|gb|EKT67323.1| DNA gyrase subunit A [Providencia alcalifaciens Dmel2]
Length = 867
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/854 (53%), Positives = 629/854 (73%), Gaps = 16/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSEIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHEMLADLEKETVDFVPNYDGTEQIPEVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + + SI L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVINGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II++E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDEKNGRETIIVNEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+LNLK+I+ F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I +W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRKAPTPAEAKAGLIARSWALGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y L++ QAQ IL + LQ+LT +E +K++
Sbjct: 421 AAMLERAGDDAARPEWLEPQYGVHEGQ----YFLTEQQAQAILDLRLQKLTGLEHEKLLE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y ++K++ +L IL + +R++E+I +EL I++ Y + RR+EI N + + ED
Sbjct: 477 EYRELLKQIEELLFILRSPERLMEVIREELEAIRDAY----NDPRRTEITENTADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILC
Sbjct: 533 LINQEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + YVFM
Sbjct: 593 FSSRGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----REYEEGYYVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS PR +GIIAVNL+ D LIG LT+GS ++MLFS GK VRF E
Sbjct: 649 ATASGTVKKTPLQDFSRPRSAGIIAVNLNEGDELIGVDLTNGSNEVMLFSAQGKVVRFAE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
++VRAMGR+A GV G++L KV++L++ + +LT TENG+GKRT EY +R
Sbjct: 709 DAVRAMGRTATGVRGIKLMDNDKVVSLIIPRGEGH-ILTVTENGFGKRTEEAEYPTKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ISIK ++RNG VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 768 TQGVISIKVSERNGHVVGAIQVEDTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRT 827
Query: 838 ENKSKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 828 AEDEKVVGLQRVAE 841
>gi|167627420|ref|YP_001677920.1| DNA topoisomerase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|167597421|gb|ABZ87419.1| DNA topoisomerase (ATP-hydrolyzing) [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 864
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/848 (55%), Positives = 628/848 (74%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIPTKESSSINIEKELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMQKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ N + +I DLI+ IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTMALIDNSQLTIEDLIQYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E ++ I+I E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKVDIHEDEASGKSQIVITEIPYQVNKAKLVEKIAELVKDKKVTGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I +I+++ +P EAK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIDLIKASPSPAEAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q + Y L++ QA+ IL + L RLT +EQ KI N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQADSSYNLTEEQAEAILALRLHRLTGLEQDKITNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I+++ L ILS+ +I ++ +EL I++ YG R+SEII++ ++ + EDLI
Sbjct: 480 KELIERIKYLIGILSDVSELIRVVKEELVEIRDNYGDE----RKSEIIVSRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 TEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L E+IT ++P+S +F + YVFMST
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLDKNERITALMPIS----EFTEGWYVFMST 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDG+ IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHDNQKIVSVIVTNPDEGVVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV+ +I++IT G L+RT ++R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVDNDEDIVMITDNGTLVRTSSDQVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + + + I+ FS+ G+
Sbjct: 647 VFMSTKLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHDNQKIVSVI-VTN-----PDEGVVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L D DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVDNDEDIVMITDNGTLVRTSSDQVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
GRSA+GV + L +K+I+L V + +
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKVVKQEDE 846
>gi|335420685|ref|ZP_08551722.1| DNA gyrase, A subunit [Salinisphaera shabanensis E1L3A]
gi|334894421|gb|EGM32617.1| DNA gyrase, A subunit [Salinisphaera shabanensis E1L3A]
Length = 892
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/852 (52%), Positives = 618/852 (72%), Gaps = 13/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE++SI LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MADVAKEILSINLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++E+L D++K+T+DFI NYD E EP+VLPTR+PNLL+NG +GIAVGMAT
Sbjct: 121 RYTEVRMARLAHEILADIEKDTVDFIPNYDESESEPAVLPTRLPNLLVNGGTGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++ VL V+ +P+ SI L++ +P PDFPTA +I G + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVVNAVLAVMDDPQISIAGLMEHVPGPDFPTAAMINGADGIREAYETGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ H E+ + + +I++ ELPYQVNK LLEKI++LVK+K++E I+ LRDESDK G
Sbjct: 241 YMRARAHFEDVDERGKQSIVVTELPYQVNKARLLEKIAELVKDKRIEGITELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+V+EL+R E PE+VLN LY+ +Q+Q FG+NM+AL +GQP+ LNLK++L FI HR+E
Sbjct: 301 MRMVVELRRGETPEVVLNNLYRHSQMQTVFGINMVALGDGQPRTLNLKQLLEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT +EL KAR AH+LEGLTIAL NID I +I+++S P EA+ +I W V
Sbjct: 361 VVTRRTQYELAKARARAHVLEGLTIALANIDEVIALIKASSGPAEAREALINREWPPGQV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + ++ LQ N Y+L++ QAQ IL + L RLT +EQ KII ++E
Sbjct: 421 VDMLDRAGAESSRPADLSKAYGLQENGSYRLTETQAQAILDLRLHRLTGLEQSKIIEEFE 480
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ K+ D +ILSN R+ E+I +EL I+ YG +K +EI+ + ++ +T DLIA
Sbjct: 481 QLLDKIADYIEILSNMARLFEVIREELEAIRRDYGDERK----TEILDSHLDLTTADLIA 536
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TL++ GY+KSQP+ YRAQ+RGGRGK A TKD D+I++L++A+THD +LCFS+
Sbjct: 537 PEDVVVTLTHEGYVKSQPLDAYRAQRRGGRGKSATQTKDADFIDKLWVAHTHDTLLCFSS 596
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ YWLKV+++P R +RGKPI+N+ L+ E+I+ +LP+ +DF + VF +T
Sbjct: 597 AGKAYWLKVYELPSAGRGARGKPIVNLLPLEADERISQVLPI----KDFSTSQNVFFATR 652
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIA++L ++D L+G LT G ++MLFS GK +RF E V
Sbjct: 653 NGTVKKTALEQFSRPRSNGIIAIDLRDDDALVGVDLTGGDDELMLFSSGGKVIRFAERDV 712
Query: 721 RAMGRSARGVIGMRL---EKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
R MGR+A GV G+RL E VIAL+V + +LT TE GYGKRT + +Y RG
Sbjct: 713 REMGRNAAGVRGIRLPEDEADAAVIALIVIRD--GDILTVTEQGYGKRTPVGDYPLRGRG 770
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G++S+K + ++G VV AT V EIMLI+ G LIRT V+EI +GR+TQGV +I V
Sbjct: 771 GQGVLSLKQSDKSGAVVGATQVLEDDEIMLISNMGTLIRTAVAEISVLGRNTQGVRIIRV 830
Query: 838 ENKSKLCGVQRL 849
+ L GV R+
Sbjct: 831 ADDQHLVGVDRI 842
>gi|2731385|gb|AAB95117.1| DNA gyrase [Serratia marcescens]
Length = 880
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/851 (54%), Positives = 625/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV++G L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLAEVVNGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YLRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYALTQLQVTFGINMVALHQGQPKLLNLKDILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL + +R++E+I +EL +K Y + RR+EI N + + EDLI
Sbjct: 480 ELLNFIAELIFILESPERLMEVIREELVAVKELY----NDGRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS +GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + VI+L+V + +LT T+NG+GKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLGEGDSVISLIVPRGEG-DILTVTQNGFGKRTAVTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG+VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGQVVGAVQVETSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|212712305|ref|ZP_03320433.1| hypothetical protein PROVALCAL_03391 [Providencia alcalifaciens DSM
30120]
gi|212685051|gb|EEB44579.1| hypothetical protein PROVALCAL_03391 [Providencia alcalifaciens DSM
30120]
Length = 867
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/854 (53%), Positives = 629/854 (73%), Gaps = 16/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSEIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHEMLADLEKETVDFVPNYDGTEQIPEVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + + SI L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVINGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II++E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDEKNGRETIIVNEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+LNLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK +I +W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRKAPTPAEAKAGLIARSWALGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y L++ QAQ IL + LQ+LT +E +K++
Sbjct: 421 AAMLERAGDDAARPEWLEPQYGVHEGQ----YFLTEQQAQAILDLRLQKLTGLEHEKLLE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y ++K++ +L IL + +R++E+I +EL I++ Y + RR+EI N + + ED
Sbjct: 477 EYRELLKQIEELLFILRSPERLMEVIREELEAIRDAY----NDPRRTEITENTADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILC
Sbjct: 533 LINQEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + YVFM
Sbjct: 593 FSSRGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----REYEEGYYVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS PR +GIIAVNL+ D LIG LT+GS ++MLFS GK VRF E
Sbjct: 649 ATASGTVKKTPLQDFSRPRSAGIIAVNLNEGDELIGVDLTNGSNEVMLFSAQGKVVRFAE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
++VRAMGR+A GV G++L KV++L++ + +LT TENG+GKRT EY +R
Sbjct: 709 DAVRAMGRTATGVRGIKLMDNDKVVSLIIPRGEGH-ILTVTENGFGKRTEEAEYPTKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ISIK ++RNG VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 768 TQGVISIKVSERNGHVVGAIQVEDTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRT 827
Query: 838 ENKSKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 828 AEDEKVVGLQRVAE 841
>gi|254876524|ref|ZP_05249234.1| DNA gyrase subunit A gyrA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842545|gb|EET20959.1| DNA gyrase subunit A gyrA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 864
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/848 (55%), Positives = 628/848 (74%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIPTKESSSINIEKELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMQKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ N + +I DLI+ IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTMALIDNSQLTIEDLIQYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E ++ I+I E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKSQIVITEIPYQVNKAKLVEKIAELVKDKKVTGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I +I+++ +P EAK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIDLIKASPSPAEAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q + Y L++ QA+ IL + L RLT +EQ KI N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQADSSYNLTEEQAEAILALRLHRLTGLEQDKITNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I+++ L ILS+ +I ++ +EL I++ YG R+SEII++ ++ + EDLI
Sbjct: 480 KELIERIKYLIGILSDVSELIRVVKEELVEIRDNYGDE----RKSEIIVSRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 TEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L E+IT ++P+S +F + YVFMST
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLDKNERITALMPIS----EFTEGWYVFMST 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDG+ IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHDNQKIVSVIVTNPDEGVVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV+ +I++IT G L+RT ++R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVDNDEDIVMITDNGTLVRTSSDQVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + + + I+ FS+ G+
Sbjct: 647 VFMSTKLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHDNQKIVSVI-VTN-----PDEGVVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L D DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVDNDEDIVMITDNGTLVRTSSDQVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
GRSA+GV + L +K+I+L V + +
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKVVKQEDE 846
>gi|387129110|ref|YP_006292000.1| DNA gyrase subunit A [Methylophaga sp. JAM7]
gi|386270399|gb|AFJ01313.1| DNA gyrase subunit A [Methylophaga sp. JAM7]
Length = 859
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/853 (52%), Positives = 622/853 (72%), Gaps = 14/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A E+ SI +EEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MSEIALELDSIGIEEEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNNWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD AAM
Sbjct: 61 APYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQPFSMRYMLVDGQGNFGSVDGDPPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DL+KET+DFI NYD E EP+VLP +IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHEMLADLEKETVDFIPNYDESESEPAVLPAKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E++D + ++ P + L+ +P PDFPT+ II G + + Y TG+GRV
Sbjct: 181 NIPPHNLNEILDACIAIIDEPGIDVAGLMTHVPGPDFPTSAIINGARGIAEAYQTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + +I+++ELPYQVNK LLEKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YIRARAEIETNEATGQQSIVVNELPYQVNKARLLEKIAELVKEKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VI L+R E+PE+VLN LY+QTQ+Q FG+NM+A+V+GQP+ LNLKE+L FI HR+E
Sbjct: 301 MRMVIVLRRGEVPEVVLNNLYQQTQMQTVFGINMVAIVDGQPRTLNLKEVLDAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR+IFELRKARE AHILEGL AL NID I++I+++ +P EA+ ++ W +
Sbjct: 361 VVTRRSIFELRKARERAHILEGLATALANIDEVIELIKASPSPAEAREALLARGWRSEMI 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+++G S+ N++ + Y LS +QAQ IL M L RLT +EQ KI+ +
Sbjct: 421 LEMLGAAGA---AASRPENLAAEFGLVDGQYHLSPVQAQAILDMRLHRLTGLEQDKILQE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y +V+ ++ DL ILS++ ++ +I EL +K +YG + RR+EI+ ++ + EDL
Sbjct: 478 YRDVLDQIRDLLAILSDADNLMAVIRQELVDVKEEYG----DARRTEILDAHLDLTLEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I ++MV+TLS+ GY K+ + Y+AQ+RGG+GK A KDED++ LFIANTHD +LCF
Sbjct: 534 ICEEEMVVTLSHAGYAKTTQLDTYQAQRRGGKGKAATSMKDEDFVEHLFIANTHDTLLCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ G++YW KV+++PQG R +RGKPI+N+ L+ E+I +LP+ R+F + ++FM+
Sbjct: 594 SSAGKVYWKKVYELPQGGRTARGKPIVNLLPLEEGERINAVLPI----REFEADKFIFMA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L ++S PR +GIIAV+L +D L+ ALTDG+ D+MLFS +GK +RF E
Sbjct: 650 TASGTVKKTPLVDYSRPRANGIIAVDLKEDDVLVDVALTDGASDVMLFSTNGKVIRFPET 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR+MGR +RGV GMRL +K+I+L+++ ++ ++LTATE G+GKRT + EY RG
Sbjct: 710 DVRSMGRVSRGVRGMRLTDGEKIISLIIARSEG-AILTATEFGFGKRTHLDEYRVQGRGG 768
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+GIISI+T+ RNG+VV A V+ +IM+IT GG L+RT V + +GR+TQGV LI +
Sbjct: 769 QGIISIQTSARNGQVVGAVQVDDEDQIMMITNGGTLVRTPVKHVSLVGRNTQGVKLINLT 828
Query: 839 NKSKLCGVQRLCK 851
+L GV+R+ +
Sbjct: 829 KDERLVGVERVIE 841
>gi|423201630|ref|ZP_17188209.1| DNA gyrase subunit A [Aeromonas veronii AER39]
gi|404616662|gb|EKB13615.1| DNA gyrase subunit A [Aeromonas veronii AER39]
Length = 915
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/925 (51%), Positives = 642/925 (69%), Gaps = 56/925 (6%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N + +I++L+ I PDFPT GII G S + Y TG+G +
Sbjct: 181 NIPPHNLTEIVNGCLALIENGDLTIDELMTYITGPDFPTGGIINGRSGIVQAYRTGRGSI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + +R II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E EIVLN LYK TQ+Q TFG+NM+AL N QPK++NLKEIL F+LHR+E
Sbjct: 301 MRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINMVALDNNQPKVMNLKEILDAFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL +AL NID I++IR ++TP +AK ++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAVALANIDPIIELIRHSATPADAKAGLVAKGWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 421 AAMLEKAGDDAARPEWLEPEFGIREGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y++++ + +L IL++ R++E+I DEL ++ +YG RR+EI +++ + ED
Sbjct: 477 EYQSLLDLIAELLHILASPARLMEVIRDELLAVREQYGDE----RRTEISMSSAEINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED++ +L +ANTHD ILC
Sbjct: 533 LITPEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G++YWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ +++ YVF
Sbjct: 593 FSTRGKVYWLKVYQLPEASRGARGRPIINLLPLEEGERITAILPV----KEYDAEKYVFF 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS+FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRF E
Sbjct: 649 ATANGTVKKTSLSDFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFAE 708
Query: 718 NS--------------------------------------VRAMGRSARGVIGMRLEKKQ 739
S VR MGR+A GV G++L
Sbjct: 709 GSGRADADVSDDVETDDDAGNDDDGSDNGEGTESKGTFKGVRPMGRTAAGVRGIKLGAGD 768
Query: 740 KVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLV 799
KV++L+V + ++LTATENGYGKRT + EY +RGT+G+ISIK ++RNGKV+ A V
Sbjct: 769 KVVSLIVPRGEG-AILTATENGYGKRTALAEYPTKSRGTQGVISIKVDERNGKVIDAIQV 827
Query: 800 NRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYI 859
+IMLIT GG L+RTRV+E+ +GR+T GV LI + G+QR+ + +
Sbjct: 828 EDTDQIMLITNGGTLVRTRVAEVSVIGRNTGGVRLIRTGEDETVVGLQRIAESDEDEN-- 885
Query: 860 PVITIDGPTASGKGTVAQLVASKLG 884
+ +DG + G T A G
Sbjct: 886 DALAVDGEVSEGTDTATGTDAVDAG 910
>gi|373949592|ref|ZP_09609553.1| DNA gyrase, A subunit [Shewanella baltica OS183]
gi|386324572|ref|YP_006020689.1| DNA gyrase subunit A [Shewanella baltica BA175]
gi|333818717|gb|AEG11383.1| DNA gyrase, A subunit [Shewanella baltica BA175]
gi|373886192|gb|EHQ15084.1| DNA gyrase, A subunit [Shewanella baltica OS183]
Length = 916
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/874 (54%), Positives = 626/874 (71%), Gaps = 35/874 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDFVPNYDGTELIPAVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 181 NIPPHNLTEVVKGCLALIEEPSLSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RA +E + R II+ E+PYQVNK L+EKI++LVK+KKLE IS LRDESDK G
Sbjct: 241 IMRALADVETEDN-GRERIIVTEIPYQVNKARLIEKIAELVKDKKLEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP +AK K++E W L V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWELGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + + Y L++ QAQ IL++ L RLT +E KII +
Sbjct: 420 Q---GMLEKAGDDAARPEWLEPQYGIRDGQYFLTEQQAQAILELRLHRLTGLEHDKIIAE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+I +EL I ++YG + RR+ I N ++ S EDL
Sbjct: 477 YEELLEFIAGLLFILRSPERLMEVIKEELVQILDEYG----DARRTVINANEVDMSLEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K QP+++Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 533 INEEDVVVTLSHLGYAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR +RG+PI+N+ L + E+IT ILP+ R++ + Y+ M+
Sbjct: 593 SDFGKMYWLKVYQLPLASRTARGRPIVNLLPLSDGERITAILPV----REYAADKYIIMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L+ +SNPR +GIIAVNL + D LIG +T+G +IMLFS+ GK VRF E
Sbjct: 649 TSHGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFGEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
S+R MGR+A GV G+RLE+ QKV++L+V ++LT T
Sbjct: 709 VRDSETGEVKTDPETGEEVLSLRPMGRTATGVRGIRLEEGQKVVSLIVPKGDG-AILTVT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT + EY +R TKG++SIK ++RNG VV A V E+MLI+ G L+RT
Sbjct: 768 ENGYGKRTQLSEYPAKSRATKGVVSIKVSERNGAVVGAVQVGLNDELMLISDKGTLVRTP 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ +GR+TQGV +I K+ G+QR+ +I
Sbjct: 828 AGGVSIIGRNTQGVTIIRTAGDEKVVGLQRIDEI 861
>gi|84393089|ref|ZP_00991854.1| DNA gyrase, subunit A [Vibrio splendidus 12B01]
gi|84376246|gb|EAP93129.1| DNA gyrase, subunit A [Vibrio splendidus 12B01]
Length = 895
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/852 (53%), Positives = 631/852 (74%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+++VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+ ELL DLDK+T+DF+ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAGELLTDLDKDTVDFVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L ++N + +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVVDGCLAFINNEDITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R++ +I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSRANI-EMEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L N+K++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYSQTQLQTTFGINMVALNNGQPQLFNIKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELKKARDRAHILEALSLALANIDEIIELIKNAPTPAEAKVGLVSRGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPDWLEDQYGIRDGQ----YFLTETQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ YG RR+EI + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELEAVRDIYGDE----RRTEITAAVHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLSN GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSNAGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+PQ SR +RGKPI+N+ L+ E+IT ILP+S +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPQASRTARGKPIVNILPLEEGERITAILPVS----EFSNEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +TDG+ DIMLFS SGK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIAVNLRDDDSLIGVDITDGNSDIMLFSKSGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR MGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRPMGRTASGVRGMKLPEDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK + RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSDRNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDENVVGLQRI 838
>gi|453063757|gb|EMF04733.1| DNA gyrase subunit A [Serratia marcescens VGH107]
Length = 880
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/851 (54%), Positives = 625/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV++G L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLAEVVNGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YLRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYALTQLQVTFGINMVALHQGQPKLLNLKDILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL + +R++E+I +EL +K Y + RR+EI N + + EDLI
Sbjct: 480 ELLNFIAELIFILESPERLMEVIREELVAVKELY----NDGRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS +GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + VI+L+V + +LT T+NG+GKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLGEGDSVISLIVPRGEG-DILTVTQNGFGKRTAVTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG+VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGQVVGAVQVETSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|115314422|ref|YP_763145.1| DNA gyrase subunit A [Francisella tularensis subsp. holarctica
OSU18]
gi|115129321|gb|ABI82508.1| DNA topoisomerase (ATP-hydrolyzing) [Francisella tularensis subsp.
holarctica OSU18]
Length = 868
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/848 (55%), Positives = 626/848 (73%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIITKESSSINIEKELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ NP +I +LI+ IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTIALIDNPNLTIEELIEYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E + II+ E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKAQIIVTEIPYQVNKAKLVEKIAELVKDKKVAGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIELIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + + +Q + Y L++ QA IL + L RLT +EQ KI+N++
Sbjct: 421 KSMLEGVDVKMYRK-ETLASYYGIQVDSSYNLTEEQADAILALRLHRLTGLEQDKIVNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I ++ L ILS+ K +I ++ DEL I++ YG R+SEII + ++ + EDLI
Sbjct: 480 KELIDRIKYLISILSDIKELICVVKDELVEIRDNYGDQ----RKSEIIESRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 AEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L+ E+IT ++P+S F + YVFM+T
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLEKDERITAMMPISQ----FNEGWYVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDG+ IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHHNQKIVSVIVTNPDEGIVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV +I++IT G L+RT E+R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 105/205 (51%), Gaps = 14/205 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + + + I+ FS+ G+
Sbjct: 647 VFMATKLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHHNQKIVSVI-VTN-----PDEGIVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L + DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLV 746
GRSA+GV + L +K+I+L V
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKV 840
>gi|448243135|ref|YP_007407188.1| DNA gyrase subunit A [Serratia marcescens WW4]
gi|445213499|gb|AGE19169.1| DNA gyrase subunit A [Serratia marcescens WW4]
Length = 880
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/851 (54%), Positives = 625/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV++G L + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLAEVVNGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YLRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYALTQLQVTFGINMVALHQGQPKLLNLKDILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLERAGDDAARPEWLEPEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL + +R++E+I +EL +K Y + RR+EI N + + EDLI
Sbjct: 480 ELLNFIAELIFILESPERLMEVIREELVAVKELY----NDGRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS +GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + VI+L+V + +LT T+NG+GKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLGEGDSVISLIVPRGEG-DILTVTQNGFGKRTAVTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG+VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGQVVGAVQVETSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|406677146|ref|ZP_11084331.1| DNA gyrase subunit A [Aeromonas veronii AMC35]
gi|404625460|gb|EKB22277.1| DNA gyrase subunit A [Aeromonas veronii AMC35]
Length = 915
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/925 (51%), Positives = 642/925 (69%), Gaps = 56/925 (6%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N + +I++L+ I PDFPT GII G S + Y TG+G +
Sbjct: 181 NIPPHNLTEIVNGCLALIENGDLTIDELMTYITGPDFPTGGIINGRSGIVQAYRTGRGSI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + +R II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E EIVLN LYK TQ+Q TFG+NM+AL N QPK++NLKEIL F+LHR+E
Sbjct: 301 MRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINMVALDNNQPKVMNLKEILDAFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL +AL NID I++IR ++TP +AK ++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAVALANIDPIIELIRHSATPADAKAGLVAKGWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 421 AAMLEKAGDDAARPEWLEPEFGIREGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y++++ + +L IL++ R++E+I DEL ++ +YG RR+EI +++ + ED
Sbjct: 477 EYQSLLDLIAELLHILASPARLMEVIRDELLAVREQYGDE----RRTEISMSSAEINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED++ +L +ANTHD ILC
Sbjct: 533 LITPEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G++YWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ +++ YVF
Sbjct: 593 FSTRGKVYWLKVYQLPEASRGARGRPIINLLPLEEGERITAILPV----KEYDAEKYVFF 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS+FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRF E
Sbjct: 649 ATANGTVKKTSLSDFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFAE 708
Query: 718 NS--------------------------------------VRAMGRSARGVIGMRLEKKQ 739
S VR MGR+A GV G++L
Sbjct: 709 GSGRADADVSDDVETDDDAGNDDDGSDNGEGTESKGTFKGVRPMGRTAAGVRGIKLGAGD 768
Query: 740 KVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLV 799
KV++L+V + ++LTATENGYGKRT + EY +RGT+G+ISIK ++RNGKV+ A V
Sbjct: 769 KVVSLIVPRGEG-AILTATENGYGKRTALAEYPTKSRGTQGVISIKVDERNGKVIDAIQV 827
Query: 800 NRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYI 859
+IMLIT GG L+RTRV+E+ +GR+T GV LI + G+QR+ + +
Sbjct: 828 EDTDQIMLITNGGTLVRTRVAEVSVIGRNTGGVRLIRTGEDETVVGLQRIAESDEDEN-- 885
Query: 860 PVITIDGPTASGKGTVAQLVASKLG 884
+ +DG + G T A G
Sbjct: 886 DALAVDGEVSEGTDTATGTDAVDAG 910
>gi|270262776|ref|ZP_06191047.1| DNA gyrase subunit A [Serratia odorifera 4Rx13]
gi|333928304|ref|YP_004501883.1| DNA gyrase subunit A [Serratia sp. AS12]
gi|333933257|ref|YP_004506835.1| DNA gyrase subunit A [Serratia plymuthica AS9]
gi|386330127|ref|YP_006026297.1| DNA gyrase subunit A [Serratia sp. AS13]
gi|421784627|ref|ZP_16221064.1| DNA gyrase, A subunit [Serratia plymuthica A30]
gi|270043460|gb|EFA16553.1| DNA gyrase subunit A [Serratia odorifera 4Rx13]
gi|333474864|gb|AEF46574.1| DNA gyrase, A subunit [Serratia plymuthica AS9]
gi|333492364|gb|AEF51526.1| DNA gyrase, A subunit [Serratia sp. AS12]
gi|333962460|gb|AEG29233.1| DNA gyrase, A subunit [Serratia sp. AS13]
gi|407753096|gb|EKF63242.1| DNA gyrase, A subunit [Serratia plymuthica A30]
Length = 883
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/851 (54%), Positives = 624/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEVINGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YLRARAEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+E
Sbjct: 301 MRIVVEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALHQGQPKLLNLKDILQAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLVAQAWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 GAMLERAGDDAARPEWLEPEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL N R++E+I +EL +K Y + RR+EI N + + EDLI
Sbjct: 480 ELLTFIAELIFILENPDRLMEVIREELVAVKELY----NDGRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS +GK VRF E V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + VI+L+V + +LT T+NGYGKRT + EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLGEGDGVISLIVPRGEG-DILTVTQNGYGKRTAVTEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG+VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGQVVGAVQVETTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|352081374|ref|ZP_08952252.1| DNA gyrase, A subunit [Rhodanobacter sp. 2APBS1]
gi|351683415|gb|EHA66499.1| DNA gyrase, A subunit [Rhodanobacter sp. 2APBS1]
Length = 857
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/850 (54%), Positives = 626/850 (73%), Gaps = 14/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKEVI + +E+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N+WN
Sbjct: 1 MAELAKEVIRVNIEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD S+YDA+VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDQSVYDAIVRMAQPFSLRYLLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++ELL D+DKET+DF NYD E EP VLPTR+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMSRLTHELLADIDKETVDFGPNYDESEHEPLVLPTRVPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI + ++ P SI++L+ IP PDFPT GII G S + + Y TG+GR+
Sbjct: 181 NIPPHNLNEVIAATIALIDEPTLSIDELMHYIPGPDFPTHGIINGSSGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIE-EFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
++RAK IE E N R II+ ELPYQVNK L+EKI++LVKEKKLE IS LRDESDK
Sbjct: 241 LVRAKAEIETESN--GRETIIVHELPYQVNKARLIEKIAELVKEKKLEGISELRDESDKD 298
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIE++++ + ++VLN L++QTQLQ TFG+NM+AL++GQPKLLNLK+IL FI HR+
Sbjct: 299 GMRVVIEIRKDAMGDVVLNNLFQQTQLQVTFGINMVALLDGQPKLLNLKDILEAFIRHRR 358
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRTIFELRKAR AHILEGLT+AL NID I++I+++S+P EA+ +++ W
Sbjct: 359 EVVTRRTIFELRKARARAHILEGLTVALANIDEMIELIKTSSSPAEARERMVARRWEAGL 418
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + ++ L+ +D Y+LS+ QA EIL M L RLT +EQ+K+ ++Y
Sbjct: 419 VRALLSATGADASRPEDMDPRDGLK-DDGYQLSEAQALEILAMRLHRLTGLEQEKLSDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+++ + L +IL N R++E+I +EL +K ++G + RR+EI + + + DLI
Sbjct: 478 RQILETIRGLIEILENPNRLLEVIREELEAVKAEFG----DARRTEIQHSQEDLNVLDLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS+ GY+K QP S YRAQ+RGG+G+ A KDED + QL++ NTHD +L F+
Sbjct: 534 APEDMVVTLSHTGYVKRQPASTYRAQRRGGKGRSASALKDEDVVEQLWVVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YWLKV+QIP+ +RGKPIIN+ L EK+ +LP+ R++ + YVF +T
Sbjct: 594 STGRVYWLKVYQIPEAGPGARGKPIINLLPLGEGEKVQAVLPV----REYSDDRYVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT L+ F+ + G A+ L D L+ LTDG+ DI+LF+ +GK RF+EN+
Sbjct: 650 RHGTVKKTPLTEFAYQLQKGKQAIKLDEGDALVNVELTDGNSDILLFASNGKVNRFDENT 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR+MGR+A GV GM+L +V++L+V+ + +LTAT GYGKRT + E+ K RGT+
Sbjct: 710 VRSMGRTATGVRGMKLVGGAEVVSLIVA--AEGDILTATARGYGKRTELAEFAKKGRGTQ 767
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I I+ ++RNG +VAA V HE+MLI+ G L+RTRV+E+ ++GR+TQGV LI +
Sbjct: 768 GVIGIQCSERNGALVAAVQVTEAHELMLISNQGTLVRTRVAEVSQLGRNTQGVTLIRLPA 827
Query: 840 KSKLCGVQRL 849
L V RL
Sbjct: 828 DETLVSVMRL 837
>gi|330829610|ref|YP_004392562.1| DNA gyrase subunit A [Aeromonas veronii B565]
gi|423209750|ref|ZP_17196304.1| DNA gyrase subunit A [Aeromonas veronii AER397]
gi|328804746|gb|AEB49945.1| DNA gyrase, A subunit [Aeromonas veronii B565]
gi|404617608|gb|EKB14544.1| DNA gyrase subunit A [Aeromonas veronii AER397]
Length = 915
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/925 (51%), Positives = 642/925 (69%), Gaps = 56/925 (6%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N + +I++L+ I PDFPT GII G S + Y TG+G +
Sbjct: 181 NIPPHNLTEIVNGCLALIENGDLTIDELMTYITGPDFPTGGIINGRSGIVQAYRTGRGSI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + +R II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E EIVLN LYK TQ+Q TFG+NM+AL N QPK++NLKEIL F+LHR+E
Sbjct: 301 MRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINMVALDNNQPKVMNLKEILDAFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL +AL NID I++IR ++TP +AK ++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAVALANIDPIIELIRHSATPADAKAGLVAKGWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 421 AAMLEKAGDDAARPEWLEPEFGIREGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y++++ + +L IL++ R++E+I DEL ++ +YG RR+EI +++ + ED
Sbjct: 477 EYQSLLDLIAELLHILASPARLMEVIRDELLAVREQYGDE----RRTEISMSSAEINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED++ +L +ANTHD ILC
Sbjct: 533 LITPEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G++YWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ +++ YVF
Sbjct: 593 FSTRGKVYWLKVYQLPEASRGARGRPIINLLPLEEGERITAILPV----KEYDAEKYVFF 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS+FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRF E
Sbjct: 649 ATANGTVKKTSLSDFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFAE 708
Query: 718 NS--------------------------------------VRAMGRSARGVIGMRLEKKQ 739
S VR MGR+A GV G++L
Sbjct: 709 GSGRADADVSDDVETDDDAGNDDDGSDNGEGTESKGTFKGVRPMGRTAAGVRGIKLGAGD 768
Query: 740 KVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLV 799
KV++L+V + ++LTATENGYGKRT + EY +RGT+G+ISIK ++RNGKV+ A V
Sbjct: 769 KVVSLIVPRGEG-AILTATENGYGKRTALAEYPTKSRGTQGVISIKVDERNGKVIDAIQV 827
Query: 800 NRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYI 859
+IMLIT GG L+RTRV+E+ +GR+T GV LI + G+QR+ + +
Sbjct: 828 EDTDQIMLITNGGTLVRTRVAEVSVIGRNTGGVRLIRTGEDETVVGLQRIAESDEDEN-- 885
Query: 860 PVITIDGPTASGKGTVAQLVASKLG 884
+ +DG + G T A G
Sbjct: 886 DALAVDGEVSEGTDTATGTDAVDAG 910
>gi|389794732|ref|ZP_10197878.1| DNA gyrase subunit A [Rhodanobacter fulvus Jip2]
gi|388431946|gb|EIL88986.1| DNA gyrase subunit A [Rhodanobacter fulvus Jip2]
Length = 886
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/849 (53%), Positives = 628/849 (73%), Gaps = 12/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKEVI + +E+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N+WN
Sbjct: 1 MAELAKEVIRVNIEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD S+YDA+VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDQSVYDAIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++ELL D+DK+T+DF NYD E+EP VLP+R+PNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMSRLTHELLADIDKDTVDFGFNYDESEREPLVLPSRVPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI + ++ P I+DL+ IP PDFPT GII G S + + Y TG+GR+
Sbjct: 181 NIPPHNLNEVIAATIALIDEPSLGIDDLMHYIPGPDFPTCGIINGSSGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK + E + R I+I ELPYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 LVRAKAEV-ETDAHGRETILIHELPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIE++++ + ++VLN L++QTQLQ TFG+NM+AL++GQPKLLNLK+IL FI HR+E
Sbjct: 300 MRVVIEIRKDAMGDVVLNNLFQQTQLQVTFGINMVALLDGQPKLLNLKDILEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIF+LRKAR AHILEGLT+AL NID I++I+++S+P EA+ +++ W V
Sbjct: 360 VVTRRTIFDLRKARARAHILEGLTVALANIDEMIELIKTSSSPAEARERMVARRWEAGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + +++ L+ +D Y+LS+ QA EIL M L RLT +EQ+K+ ++Y
Sbjct: 420 RALLSATGSEASRPEEMDPRDGLK-DDGYQLSEAQALEILAMRLHRLTGLEQEKLSDEYR 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + L +IL N R++E+I +EL + ++G + RR+EI + + + DLIA
Sbjct: 479 QILETIRGLIEILENPARLLEVIREELEAVNAEFG----DARRTEIQHSQEDLNVLDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+TLS+ GY+K QP S YR+Q+RGG+G+ A K+ED + QL++ NTHD +L F++
Sbjct: 535 PEDMVVTLSHTGYVKRQPASTYRSQRRGGKGRSASALKEEDVVEQLWVVNTHDTLLTFTS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YWL V+QIP+ S +RGKPI+N+ L E + +LP+ RD+ + YVF +T
Sbjct: 595 TGRVYWLNVYQIPEASPGARGKPIVNLLPLGEGEHVQAVLPI----RDYSDDRYVFFATR 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L F+ + G +A+ L+ +D L+ LTDG+ DI+LF+ +GK RF+EN+V
Sbjct: 651 QGTVKKTPLGEFAFQLQKGKLAIRLNEDDALVNVELTDGNSDILLFASNGKVNRFDENTV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV GM+L K V++L+V+ + +LTATE GYGKRT + E+TK RGT+G
Sbjct: 711 RSMGRTAAGVRGMKLAKDAHVVSLIVA--AEGDILTATERGYGKRTPLVEFTKKGRGTQG 768
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I I+ ++RNG +VAA V HE+MLI+ G L+RTRV+E+ ++GR+TQGV LI +
Sbjct: 769 VIGIQCSERNGALVAAAQVTEEHELMLISDQGTLVRTRVAEVSQLGRNTQGVTLIRLPAD 828
Query: 841 SKLCGVQRL 849
KL V RL
Sbjct: 829 EKLVSVMRL 837
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 552 GYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQ 611
G +K P+ E+ Q + +GK A+ ++D + + + + + IL F++ G++
Sbjct: 652 GTVKKTPLGEFAFQLQ--KGKLAIRLNEDDALVNVELTDGNSDILLFASNGKVNRFDENT 709
Query: 612 IPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSN 671
+ R + G + M K+ +++I+ + + +T G K+T L
Sbjct: 710 VRSMGRTAAG--VRGMKLAKDAHVVSLIVAAEGD---------ILTATERGYGKRTPLVE 758
Query: 672 FSNPRKS--GIIAVNLSNED-FLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
F+ + G+I + S + L+ AA +++ML SD G VR V +GR+ +
Sbjct: 759 FTKKGRGTQGVIGIQCSERNGALVAAAQVTEEHELMLISDQGTLVRTRVAEVSQLGRNTQ 818
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSV 754
GV +RL +K+++++ + ++ +V
Sbjct: 819 GVTLIRLPADEKLVSVMRLDAEEDAV 844
>gi|293395209|ref|ZP_06639495.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Serratia odorifera
DSM 4582]
gi|291422386|gb|EFE95629.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Serratia odorifera
DSM 4582]
Length = 921
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/848 (54%), Positives = 626/848 (73%), Gaps = 10/848 (1%)
Query: 4 FAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPF 63
A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN+P+
Sbjct: 45 LAREITPVNIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKPY 104
Query: 64 VKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYT 123
K ARVVG+ +GKYHPHGD ++YD +VR+AQ FSLR LVDGQGNFGS+DGDSAAAMRYT
Sbjct: 105 KKSARVVGDVIGKYHPHGDSAVYDTIVRLAQPFSLRYMLVDGQGNFGSVDGDSAAAMRYT 164
Query: 124 ECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIP 183
E R++KI++ELL DL+KET+DF+ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMATNIP
Sbjct: 165 EVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMATNIP 224
Query: 184 PHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIR 243
PHNL+EVI G L + + SI L++ IP PDFPTA II G + + Y TG+G+V IR
Sbjct: 225 PHNLSEVISGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIR 284
Query: 244 AKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRI 303
A+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK GMRI
Sbjct: 285 ARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRI 344
Query: 304 VIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIK 363
V+E+KR+ + E+VLN LY TQLQ TFG+NM+AL GQPKLLNLK+IL F+ HR+EV+
Sbjct: 345 VVEVKRDAVGEVVLNNLYSLTQLQVTFGINMVALHQGQPKLLNLKDILQAFVRHRREVVT 404
Query: 364 RRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKI 423
RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK ++ W+L +V +
Sbjct: 405 RRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNVGAM 464
Query: 424 IGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVI 483
+ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+ ++
Sbjct: 465 LERAGDDAARPEWLEPEFGIRDGKYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYKELL 523
Query: 484 KKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQD 543
+ +L IL + R++E+I +EL +++++G RR+EI N+ + + EDLI +D
Sbjct: 524 NFIAELIFILQSPDRLMEVIREELEAVRDQFGDQ----RRTEITANSSDINIEDLINQED 579
Query: 544 MVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGR 603
+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+ GR
Sbjct: 580 VVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGR 639
Query: 604 LYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGI 663
LYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + +VFM+T+ G
Sbjct: 640 LYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGRHVFMATASGT 695
Query: 664 VKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAM 723
VKKT L+ FS PR +GIIAVNL+ D LIG LTDGS ++MLFS +GK VRF E+ VR+M
Sbjct: 696 VKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPESQVRSM 755
Query: 724 GRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIIS 783
GR+A GV G+ L + VI+L+V + +LT T+NGYGKRT + EY +R T+G+IS
Sbjct: 756 GRTATGVRGINLGEGDSVISLIVPRGEG-DILTVTQNGYGKRTAVTEYPTKSRATQGVIS 814
Query: 784 IKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKL 843
IK ++RNG+VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI +
Sbjct: 815 IKVSERNGQVVGAVQVETTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDENV 874
Query: 844 CGVQRLCK 851
G+QR+ +
Sbjct: 875 VGLQRVAE 882
>gi|422009175|ref|ZP_16356158.1| DNA gyrase subunit A [Providencia rettgeri Dmel1]
gi|414092993|gb|EKT54665.1| DNA gyrase subunit A [Providencia rettgeri Dmel1]
Length = 871
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/854 (54%), Positives = 627/854 (73%), Gaps = 16/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSEIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELLADLEKETVDFVPNYDGTEQIPEVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + + SI L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVINGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRASAEVEVDEKNGRETIIVSEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+LNLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRKAPTPAEAKAGLIARSWDLGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y L++ QAQ IL + LQ+LT +E +K++
Sbjct: 421 AAMLERAGDDAARPEWLEPQFGVHEGQ----YFLTEQQAQAILDLRLQKLTGLEHEKLLE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y ++ ++ L IL + +R++E+I +EL II++ Y + RR+EI N + + ED
Sbjct: 477 EYRELLVQIEALLFILRSPERLMEVIREELEIIRDTY----NDPRRTEITENTADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A TKDED+I +L +ANTHD ILC
Sbjct: 533 LINQEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARTKDEDFIERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM
Sbjct: 593 FSSRGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----REYEEGYNVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L FS PR +GIIAVNL++ D LIG LTDGS ++MLFS GK VRF E
Sbjct: 649 ATASGTVKKTPLQEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSAQGKVVRFAE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
++VR MGR+A GV G++L KV++L++ + +LT TENGYGKRT EY +R
Sbjct: 709 DAVRPMGRTATGVRGIKLMDNDKVVSLIIPRGEGH-ILTVTENGYGKRTEEAEYPTKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 768 TQGVISIKVSERNGNVVGAIQVDETDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRT 827
Query: 838 ENKSKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 828 AEDEKVVGLQRVAE 841
>gi|388602228|ref|ZP_10160624.1| DNA gyrase subunit A [Vibrio campbellii DS40M4]
Length = 880
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/849 (53%), Positives = 631/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAFINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ +Y L++ QAQ IL++ L RLT +E +KI+++Y+
Sbjct: 420 ASMLERAGTDAARPEWLEDQYGIRDG-LYYLTETQAQAILELRLHRLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++++R++E+I +EL +++ YG + RR+EI + E+LIA
Sbjct: 479 ALLDEIAELMHILASTERLMEVIREELEAVRDGYG----DARRTEITAATHDIDMEELIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS
Sbjct: 535 REDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILCFST 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ Y LKV+Q+P +R +RGKPI+N+ L+ E+IT ILP+ +F ++FM+T
Sbjct: 595 RGKTYRLKVYQLPHATRTARGKPIVNILPLEEGERITAILPVD----EFSPEKFIFMATG 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRF+E+ V
Sbjct: 651 DGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFSEDKV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R T+G
Sbjct: 711 RAMGRTAAGVRGMKLADEDQVVSLIVPSNEG-DILTVTQNGYGKRTELVEYPTKGRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 770 VVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAED 829
Query: 841 SKLCGVQRL 849
+ G+QR+
Sbjct: 830 ESVVGLQRI 838
>gi|118498055|ref|YP_899105.1| DNA gyrase subunit A [Francisella novicida U112]
gi|194323280|ref|ZP_03057064.1| DNA gyrase, A subunit [Francisella novicida FTE]
gi|208779535|ref|ZP_03246880.1| DNA gyrase, A subunit [Francisella novicida FTG]
gi|254374873|ref|ZP_04990354.1| DNA gyrase [Francisella novicida GA99-3548]
gi|118423961|gb|ABK90351.1| DNA gyrase, subunit A [Francisella novicida U112]
gi|151572592|gb|EDN38246.1| DNA gyrase [Francisella novicida GA99-3548]
gi|194322644|gb|EDX20124.1| DNA gyrase, A subunit [Francisella tularensis subsp. novicida FTE]
gi|208744496|gb|EDZ90795.1| DNA gyrase, A subunit [Francisella novicida FTG]
Length = 868
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/848 (55%), Positives = 626/848 (73%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIITKESSSINIEKELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ NP +I +LI+ IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTIALIDNPNLTIEELIEYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E + II+ E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKAQIIVTEIPYQVNKAKLVEKIAELVKDKKVAGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIELIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q + Y L++ QA IL + L RLT +EQ KI+N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQVDSSYNLTEEQADAILALRLHRLTGLEQDKIVNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I ++ L ILS+ +I ++ DEL I++ YG R+SEII + ++ + EDLI
Sbjct: 480 KELIDRIKYLISILSDINELIRVVKDELVEIRDNYGDQ----RKSEIIESRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 AEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L+ E+IT ++P+S F + YVFM+T
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLEKDERITAMMPISQ----FNEGWYVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDG+ IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHHNQKIVSVIVTNPDEGIVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV +I++IT G L+RT E+R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 105/205 (51%), Gaps = 14/205 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + + + I+ FS+ G+
Sbjct: 647 VFMATKLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHHNQKIVSVI-VTN-----PDEGIVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L + DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLV 746
GRSA+GV + L +K+I+L V
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKV 840
>gi|389774744|ref|ZP_10192863.1| DNA gyrase subunit A [Rhodanobacter spathiphylli B39]
gi|388438343|gb|EIL95098.1| DNA gyrase subunit A [Rhodanobacter spathiphylli B39]
Length = 870
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/850 (53%), Positives = 629/850 (74%), Gaps = 14/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + +E+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N+WN
Sbjct: 1 MAELAKEIIRVNIEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD S+YDA+VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDQSVYDAIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++ELL D+DK+T+DF NYD E EP VLP+R+P LL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMSRLTHELLADIDKDTVDFGPNYDESEHEPLVLPSRVPTLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI + ++ P SI+ L+ +P PDFPT+GII G S + + Y TG+GR+
Sbjct: 181 NIPPHNLNEVIAATIALIDEPALSIDQLMHYVPGPDFPTSGIINGSSGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIE-EFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
++RA+ IE E N R III ELPYQVNK L+EKI++LVKEKKLE IS LRDESDK
Sbjct: 241 LVRARAEIETEAN--GRETIIIHELPYQVNKARLIEKIAELVKEKKLEGISELRDESDKD 298
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIE++++ + ++VLN L++QTQLQ TFG+NM+AL++GQPKLLNLK+IL FI HR+
Sbjct: 299 GMRVVIEIRKDAMGDVVLNNLFQQTQLQVTFGINMVALLDGQPKLLNLKDILEAFIRHRR 358
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRTIFELRKAR AHILEGLT+AL NID I++I+++S+P EA+ +++ W
Sbjct: 359 EVVTRRTIFELRKARARAHILEGLTVALANIDEMIELIKTSSSPAEARERMLARKWQPGM 418
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + ++ L+ D Y+LS+IQAQEIL M L RLT +EQ+K+ ++Y
Sbjct: 419 VGALLSAAGADASRPEDMDPREGLK-ADGYQLSEIQAQEILAMRLHRLTGLEQEKLSDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+++ + L +IL N R++E+I +EL IK ++G + RR+EI + + + DLI
Sbjct: 478 RQILEAIRALIEILENPDRLLEVIREELEAIKAEFG----DARRTEIQHSQEDLNVLDLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+TLS+ GYIK QP S YRAQKRGG+G+ A KDED++ QL++ NTHD +L F+
Sbjct: 534 APEDVVVTLSHTGYIKRQPASTYRAQKRGGKGRSASALKDEDFVEQLWVVNTHDTLLAFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+QIP+ +RGKPIIN+ L EK+ +LP+ R++ ++ +VF +T
Sbjct: 594 STGRVYWQKVYQIPESGPGARGKPIINLLPLGEGEKVQAVLPI----REYAEDRFVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT LS F+ + G +A+ L ++D L+ LTDG+ DI+LF+ +GK RF+EN+
Sbjct: 650 RHGTVKKTPLSEFAFQLQKGKLAIKLHDDDALVNVELTDGNSDILLFASNGKVNRFDENT 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR+MGR+A GV GM+L +V++L+V+ + +LTAT GYGKRT + E+TK RGT+
Sbjct: 710 VRSMGRTASGVRGMKLVGGAEVVSLIVA--AEGDILTATARGYGKRTELAEFTKKGRGTQ 767
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I I+ ++RNG +V A V HE+MLI+ G L+RTRV+E+ ++GR+TQGV LI +
Sbjct: 768 GVIGIQCSERNGALVGAVQVTEAHELMLISDQGTLVRTRVAEVSQLGRNTQGVTLIKLPA 827
Query: 840 KSKLCGVQRL 849
L V RL
Sbjct: 828 DETLVSVMRL 837
>gi|411009394|ref|ZP_11385723.1| DNA gyrase subunit A [Aeromonas aquariorum AAK1]
Length = 913
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/920 (51%), Positives = 642/920 (69%), Gaps = 48/920 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD+++YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N + +I++L+ I PDFPT GII G S + Y TG+G +
Sbjct: 181 NIPPHNLTEIVNGCLALIENGDLTIDELMTYITGPDFPTGGIINGRSGIVQAYRTGRGSI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + +R II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E EIVLN LYK TQ+Q TFG+NM+AL N QPK++NLKEIL F+LHR+E
Sbjct: 301 MRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINMVALDNNQPKVMNLKEILDAFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL +AL NID I++IR ++TP +AK ++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAVALANIDPVIELIRHSATPADAKAGLVAKGWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ Y L++ QAQ IL + L +LT +E +KI+ +Y+
Sbjct: 421 AAMLEKAGDDAARPEWLEPEFGIREGHYY-LTEQQAQAILDLRLHKLTGLEHEKILEEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + +L IL++ R++E+I DEL ++ +YG RR+EI +++ + EDLI
Sbjct: 480 SLLDLIAELLFILASPVRLMEVIRDELLAVREQYGDE----RRTEISMSSAEINIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED++ +L +ANTHD ILCFS
Sbjct: 536 PEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILCFST 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+Q+P+ SR +RG+PIIN+ L E+IT ILP+ +++ + YVF +T+
Sbjct: 596 RGKVYWLKVYQLPEASRGARGRPIINLLPLDEGERITAILPV----KEYDADKYVFFATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS- 719
G VKKT LS+FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRF E S
Sbjct: 652 NGTVKKTSLSDFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFAEGSG 711
Query: 720 -----------------------------------VRAMGRSARGVIGMRLEKKQKVIAL 744
VR MGR+A GV G++L KV++L
Sbjct: 712 RADATDEVDTDDDAGNDDDGSDNGEGTESKGTFKGVRPMGRTAAGVRGIKLGAGDKVVSL 771
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
+V ++LTATENGYGKRT + EY +RGT+G+ISIK ++RNGKV+ A V +
Sbjct: 772 IVPRGDG-AILTATENGYGKRTALDEYPTKSRGTQGVISIKVDERNGKVIDAIQVEDTDQ 830
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPVITI 864
IMLIT GG L+RTRV+E+ +GR+T GV LI + G+QR+ + ++ + +
Sbjct: 831 IMLITNGGTLVRTRVAEVSVIGRNTGGVRLIRTGEDETVVGLQRVAESD--EEETEALAV 888
Query: 865 DGPTASGKGTVAQLVASKLG 884
+G + G T A A G
Sbjct: 889 EGEVSEGTDTAADTGAVDAG 908
>gi|89255940|ref|YP_513302.1| DNA gyrase subunit A [Francisella tularensis subsp. holarctica LVS]
gi|156501933|ref|YP_001427998.1| DNA gyrase subunit A [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254367295|ref|ZP_04983322.1| DNA gyrase subunit A gyrA [Francisella tularensis subsp. holarctica
257]
gi|254368771|ref|ZP_04984784.1| DNA topoisomerase [Francisella tularensis subsp. holarctica FSC022]
gi|290954615|ref|ZP_06559236.1| DNA gyrase, subunit A [Francisella tularensis subsp. holarctica
URFT1]
gi|422938393|ref|YP_007011540.1| DNA gyrase subunit A [Francisella tularensis subsp. holarctica
FSC200]
gi|423050270|ref|YP_007008704.1| DNA gyrase subunit A [Francisella tularensis subsp. holarctica F92]
gi|89143771|emb|CAJ78973.1| DNA gyrase, subunit A [Francisella tularensis subsp. holarctica
LVS]
gi|134253112|gb|EBA52206.1| DNA gyrase subunit A gyrA [Francisella tularensis subsp. holarctica
257]
gi|156252536|gb|ABU61042.1| DNA gyrase, A subunit [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121692|gb|EDO65862.1| DNA topoisomerase [Francisella tularensis subsp. holarctica FSC022]
gi|407293544|gb|AFT92450.1| DNA gyrase, subunit A [Francisella tularensis subsp. holarctica
FSC200]
gi|421950992|gb|AFX70241.1| DNA gyrase subunit A [Francisella tularensis subsp. holarctica F92]
Length = 868
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/848 (55%), Positives = 627/848 (73%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIITKESSSINIEKELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ NP +I +LI+ IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTIALIDNPNLTIEELIEYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E + II+ E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKAQIIVTEIPYQVNKAKLVEKIAELVKDKKVAGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIELIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q + Y L++ QA IL + L RLT +EQ KI+N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQVDSSYNLTEEQADAILALRLHRLTGLEQDKIVNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I ++ L ILS+ K +I ++ DEL I++ YG R+SEII + ++ + EDLI
Sbjct: 480 KELIDRIKYLISILSDIKELICVVKDELVEIRDNYGDQ----RKSEIIESRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 AEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L+ E+IT ++P+S F + YVFM+T
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLEKDERITAMMPISQ----FNEGWYVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDG+ IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHHNQKIVSVIVTNPDEGIVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV +I++IT G L+RT E+R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 105/205 (51%), Gaps = 14/205 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + + + I+ FS+ G+
Sbjct: 647 VFMATKLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHHNQKIVSVI-VTN-----PDEGIVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L + DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLV 746
GRSA+GV + L +K+I+L V
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKV 840
>gi|385793452|ref|YP_005826428.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678777|gb|AEE87906.1| DNA gyrase subunit A [Francisella cf. novicida Fx1]
Length = 868
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/848 (55%), Positives = 625/848 (73%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIITKESSSINIEKELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ NP +I +LI+ IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTIALIDNPNLTIEELIEYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E + II+ E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKAQIIVTEIPYQVNKAKLVEKIAELVKDKKVAGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIELIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q + Y L++ QA IL + L RLT +EQ KI+N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQVDSSYNLTEEQADAILALRLHRLTGLEQDKIVNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I ++ L ILS+ +I ++ DEL I++ YG R+SEII + ++ + EDLI
Sbjct: 480 KELIDRIKYLISILSDINELIRVVKDELVEIRDNYGDQ----RKSEIIESRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 AEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L+ E+IT ++P+S F + YVFM+T
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLEKDERITAMMPISQ----FNEGWYVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDG IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGDKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHHNQKIVSVIVTNPDEGIVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV +I++IT G L+RT E+R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 104/205 (50%), Gaps = 14/205 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + + I+ FS+ G+
Sbjct: 647 VFMATKLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDGDKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHHNQKIVSVI-VTN-----PDEGIVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L + DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLV 746
GRSA+GV + L +K+I+L V
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKV 840
>gi|254373410|ref|ZP_04988898.1| hypothetical protein FTCG_01000 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151571136|gb|EDN36790.1| hypothetical protein FTCG_01000 [Francisella novicida GA99-3549]
Length = 868
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/848 (55%), Positives = 626/848 (73%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIITKESSSINIEKELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ NP +I +LI+ IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTIALIDNPNLTIEELIEYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E + II+ E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKAQIIVTEIPYQVNKAKLVEKIAELVKDKKVAGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIELIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q + Y L++ QA IL + L RLT +EQ KI+N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQVDSSYNLTEEQADAILALRLHRLTGLEQDKIVNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I ++ L ILS+ +I ++ DEL I++ YG R+SEII + ++ + EDLI
Sbjct: 480 KELIDRIKYLISILSDINELIRVVKDELVEIRDNYGDQ----RKSEIIESRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 AEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L+ E+IT ++P+S F + YVFM+T
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLEKDERITAMMPISQ----FNEGWYVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDG+ IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHHNQKIVSVIVTNPDEGIVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV +I++IT G L+RT E+R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 105/205 (51%), Gaps = 14/205 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + + + I+ FS+ G+
Sbjct: 647 VFMATKLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHHNQKIVSVI-VTN-----PDEGIVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L + DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLV 746
GRSA+GV + L +K+I+L V
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKV 840
>gi|218709923|ref|YP_002417544.1| DNA gyrase subunit A [Vibrio splendidus LGP32]
gi|218322942|emb|CAV19119.1| DNA gyrase, subunit A [Vibrio splendidus LGP32]
Length = 890
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/852 (53%), Positives = 630/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+++VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+ ELL DLDK+T+DF+ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAGELLTDLDKDTVDFVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L ++N + +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVVDGCLAFINNEDITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R++ IE + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSRAEIET-EKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L N+K++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYSQTQLQTTFGINMVALNNGQPQLFNIKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELKKARDRAHILEALSLALANIDEIIELIKNAPTPAEAKVGLVSRGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPDWLEDQYGIRDGQ----YFLTETQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ YG RR+EI + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELEAVRDIYGDE----RRTEITAAVHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLSN GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSNAGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+PQ SR +RGKPI+N+ L+ E+IT ILP+S +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPQASRTARGKPIVNILPLEEGERITAILPVS----EFSNEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +TDG+ DIMLFS SGK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIAVNLRDDDSLIGVDITDGNSDIMLFSKSGKVVRFNE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR MGR+A GV GM+L + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRPMGRTASGVRGMKLPEDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK + RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSDRNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDENVVGLQRI 838
>gi|419805516|ref|ZP_14330650.1| DNA gyrase subunit A [Escherichia coli AI27]
gi|384471473|gb|EIE55550.1| DNA gyrase subunit A [Escherichia coli AI27]
Length = 875
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/884 (52%), Positives = 641/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ MY L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-MYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|433658041|ref|YP_007275420.1| DNA gyrase subunit A [Vibrio parahaemolyticus BB22OP]
gi|432508729|gb|AGB10246.1| DNA gyrase subunit A [Vibrio parahaemolyticus BB22OP]
Length = 878
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/852 (54%), Positives = 626/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-EKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I +IR TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGIRDGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILA 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ + + RR+EI + + E+
Sbjct: 476 EYKELLEEIAELMHILASTERLMEVIREELEAVRDGFA----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L++ E+IT ILP+ +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEDGERITAILPVD----EFSADKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +T GS DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIAVNLRDDDSLIGVDITTGSSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLADDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDESVVGLQRI 838
>gi|89074076|ref|ZP_01160577.1| putative DNA topoisomerase (ATP-hydrolyzing) [Photobacterium sp.
SKA34]
gi|89050214|gb|EAR55725.1| putative DNA topoisomerase (ATP-hydrolyzing) [Photobacterium sp.
SKA34]
Length = 887
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/860 (54%), Positives = 628/860 (73%), Gaps = 22/860 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPINIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L +++ + +I+ L++ IP PDFPTA +I G + D Y+TG+G+V
Sbjct: 181 NIPPHNLGEVINGCLAYINDEDITIDQLMEYIPGPDFPTAAMISGRKGIIDAYHTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRAKADI-EVEKNGKETIIVHEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPK+ NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKIFNLKEMLKCFVNHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKAR+ AHILEGL +AL NID I++IR TP EAK +I W+L +V
Sbjct: 360 VVTRRTIYELRKARDRAHILEGLALALANIDEIIELIRRAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++N Y L++ QAQ IL + L +LT +E +KI+ +Y+
Sbjct: 420 SAMLERAGTDAARPEWLEEQFGIRDN-QYFLTEQQAQAILDLRLHKLTGLEHEKILEEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L ILS+S R++E+I +EL ++K ++ RR+EI + + EDLI
Sbjct: 479 ALLDEIAELMYILSSSDRLMEVIREELELVKEQFNDE----RRTEITAASHDIDLEDLIT 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQILSDYEAQRRGGKGKAATRMKEEDFIERLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ +VFM+T+
Sbjct: 595 RGRMYWLKVYQLPLASRTARGKPIVNILPLEENERITAILPV----REYTEDKFVFMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT L++FS PR +GIIAVNL D LIG +TDG DIMLFS GK VRF E+
Sbjct: 651 DGTVKKTPLTDFSRPRSAGIIAVNLREGDSLIGVDVTDGDCDIMLFSAFGKVVRFYESPV 710
Query: 719 ---------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIK 769
VR MGR+A GV G++L + KVI+L+V +N VLT TENGYGKRT +
Sbjct: 711 IDAEGNAKGGVRGMGRTAAGVRGIKLAEGDKVISLIVPHNDG-DVLTVTENGYGKRTELA 769
Query: 770 EYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRST 829
EY +R T+G++SIK ++RNG VV A E M+IT G L+RTRVSE+ ++GR+T
Sbjct: 770 EYPAKSRATQGVVSIKVSERNGSVVGAIQAEDGDEFMMITNAGTLVRTRVSEVSRVGRNT 829
Query: 830 QGVILITVENKSKLCGVQRL 849
QGV LI K+ G+QR+
Sbjct: 830 QGVTLIRTIEGEKVVGLQRI 849
>gi|167623965|ref|YP_001674259.1| DNA gyrase subunit A [Shewanella halifaxensis HAW-EB4]
gi|167353987|gb|ABZ76600.1| DNA gyrase, A subunit [Shewanella halifaxensis HAW-EB4]
Length = 908
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/887 (52%), Positives = 630/887 (71%), Gaps = 41/887 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R L+DGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYPLIDGQGNFGSVDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E P+VLPTRIP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKVAHQLLADLEKETVDFVPNYDGTEFIPAVLPTRIPTLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EVI G L ++ +P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 181 NIPPHNINEVISGCLALIEDPALSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++R++ IEE N R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 VMRSRAEIEEEN--GRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 298
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 299 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 358
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP EAK K++ W L V
Sbjct: 359 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPAEAKVKLVAEGWELGHV 418
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + +D Y L++ QAQ IL++ L RLT +E KII +
Sbjct: 419 K---GMLEKAGDDAARPEWLEPEFGIRDDKYYLTEQQAQAILELRLHRLTGLEHDKIIAE 475
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+I +EL + +G RR+ I N ++ S EDL
Sbjct: 476 YEELLEIIAALLFILGSPQRLMEVIKEELEEVLANFGDE----RRTVINANEVDMSLEDL 531
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K Q +S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 532 INEEDVVVTLSHLGYAKYQVLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 591
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR +RG+PI+N+ L E+IT ILP+ R++ ++ Y+ M+
Sbjct: 592 SDFGKMYWLKVYQLPLASRTARGRPIVNLLPLAEGERITAILPV----REYAEDKYIIMA 647
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L+ +SNPR +GIIAVNL + D LIG +TDG+ DIMLFS+ GK VRFNE
Sbjct: 648 TSHGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITDGNNDIMLFSNEGKVVRFNEK 707
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++RAMGR+A GV G++LE Q V++L+V + +LT T
Sbjct: 708 ARSSETGEVKIDPETGEEVIALRAMGRTATGVRGIKLEDGQTVVSLIVPKGEG-DILTVT 766
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT + EY +RGTKG++SIK ++RNG VV A V EIMLI+ G L+RT
Sbjct: 767 ENGYGKRTDLAEYPAKSRGTKGVVSIKVSERNGAVVGAVQVGENDEIMLISNKGTLVRTP 826
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPVITID 865
+ + +GR+TQGV +I K+ G+QR+ +I +P + +D
Sbjct: 827 ATGVSSIGRNTQGVTIIRTAEDEKVVGLQRIDEIQ-----VPEVELD 868
>gi|366158408|ref|ZP_09458270.1| DNA gyrase subunit A [Escherichia sp. TW09308]
gi|432372907|ref|ZP_19615947.1| DNA gyrase subunit A [Escherichia coli KTE11]
gi|430895712|gb|ELC17967.1| DNA gyrase subunit A [Escherichia coli KTE11]
Length = 875
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/879 (52%), Positives = 640/879 (72%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPQFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + ++ + TIDG A G +A V
Sbjct: 831 ENVVGLQRVAEPVDDEE---LDTIDGSAAEGDDEIAPEV 866
>gi|1170143|sp|P41513.1|GYRA_ERWCA RecName: Full=DNA gyrase subunit A
gi|525202|emb|CAA56777.1| DNA topoisomerase (ATP-hydrolysing) [Pectobacterium carotovorum]
Length = 878
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/866 (52%), Positives = 633/866 (73%), Gaps = 11/866 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + + S+ L++ I PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL GQPK++ LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR ++P EAK +I W L V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT ME +K++++Y+
Sbjct: 421 ATMLERAGDDAARPEWLEPEFGIRDGRYY-LTEQQAQAILDLRLQKLTGMEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL K +Y RR+EI N + + EDLI
Sbjct: 480 ELLAEIAELLYILNSPERLMEVIREELEAFKTQYSDE----RRTEITANTADINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + ++FM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPV----REYEEGRHIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS SGIIAVNL+ D LIG LTDGS + MLFS GK VRF+E +V
Sbjct: 652 SGTVKKTALTEFSR-HVSGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L+ + +V++L++ + +LT T+NG+GKRT + EY +R TKG
Sbjct: 711 RSMGRTATGVRGINLQGEDRVVSLIIPRGEG-DILTVTQNGFGKRTAVSEYPTKSRATKG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNGKVV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 770 VISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAED 829
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDG 866
+ G+QR+ + ++ V+ ++G
Sbjct: 830 EHVVGLQRVAEPVEDEELDGVVKVEG 855
>gi|332290506|ref|YP_004421358.1| DNA gyrase subunit A [Gallibacterium anatis UMN179]
gi|330433402|gb|AEC18461.1| DNA gyrase subunit A [Gallibacterium anatis UMN179]
Length = 877
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/876 (53%), Positives = 636/876 (72%), Gaps = 37/876 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AK++I + +EEEM SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM N +N
Sbjct: 1 MSDLAKDIIPVNIEEEMKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMAVGGNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGDS AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYPLVDGQGNFGSIDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL DLDKET+D+ NYDG E P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTQIAHELLADLDKETVDYQPNYDGSEMIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVVDGCLAYIDNEQITIDELMSYIPGPDFPTAAIINGKRGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE ++ R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YIRAKADIETDDK-GRESIIVHEIPYQVNKARLIEKIAELVKEKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + EIVLN LY TQLQ TFG+N++AL +GQPKLLNLKE++ F+LHR+E
Sbjct: 300 MRIVIEVKRDAVGEIVLNNLYALTQLQVTFGINIVALDHGQPKLLNLKELIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE AHILEGL IAL NID I++IR+ TP AK ++ W L +V
Sbjct: 360 VVTRRTVYELRKARERAHILEGLAIALANIDPIIELIRNAPTPAAAKEGLLSQPWQLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + ++ ++ +Y LS+ QAQ IL + LQ+LT +E +KI+++Y+
Sbjct: 420 EAMLAAAGVDAARPEDLDENLGIRGG-VYHLSEAQAQAILDLRLQKLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + +L IL + R++E+I +EL IK +Y + RR+EI ++ + + EDLI
Sbjct: 479 SLLDVIAELLHILHSPARLMEVIREELEKIKAQY----NDPRRTEITASSGDINLEDLIN 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS+
Sbjct: 535 PEDVVVTLSHEGYVKYQPLSDYEAQRRGGKGKSATKMKDEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+ +++ ++ ++ M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGARGRPIVNLLPLEENERITAILPV----KEYAEDKFIVMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L+ FS PR +GIIAVNL ++D LIG +T+G+ +IMLFS G+ VRF+EN+V
Sbjct: 651 GGLVKKTALTEFSRPRANGIIAVNLRDDDELIGVDITEGNNEIMLFSAQGRVVRFDENAV 710
Query: 721 RAMGRSARGVIGMRL-------------------EKKQ-------KVIALLVSNNQKQSV 754
RAMGR+A GV G++L E Q KV++L++ ++
Sbjct: 711 RAMGRTAAGVRGIKLALTNDISDEENDNEESGNDETDQSLDLSIDKVVSLVIPKTNG-AI 769
Query: 755 LTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGIL 814
LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G L
Sbjct: 770 LTATQNGYGKRTDLAEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITDAGTL 829
Query: 815 IRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
+RTRV+EI +GR+TQGV LI + ++ ++R+C
Sbjct: 830 VRTRVAEISLVGRNTQGVRLIRTSDTEQVVSIERVC 865
>gi|419392321|ref|ZP_13933133.1| DNA gyrase, A subunit [Escherichia coli DEC15A]
gi|419397361|ref|ZP_13938129.1| DNA gyrase, A subunit [Escherichia coli DEC15B]
gi|419402703|ref|ZP_13943427.1| DNA gyrase, A subunit [Escherichia coli DEC15C]
gi|419407820|ref|ZP_13948509.1| DNA gyrase, A subunit [Escherichia coli DEC15D]
gi|419413408|ref|ZP_13954060.1| DNA gyrase, A subunit [Escherichia coli DEC15E]
gi|378237521|gb|EHX97544.1| DNA gyrase, A subunit [Escherichia coli DEC15A]
gi|378243482|gb|EHY03428.1| DNA gyrase, A subunit [Escherichia coli DEC15B]
gi|378247237|gb|EHY07156.1| DNA gyrase, A subunit [Escherichia coli DEC15C]
gi|378254199|gb|EHY14063.1| DNA gyrase, A subunit [Escherichia coli DEC15D]
gi|378258840|gb|EHY18656.1| DNA gyrase, A subunit [Escherichia coli DEC15E]
Length = 875
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ MY L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-MYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|126174283|ref|YP_001050432.1| DNA gyrase subunit A [Shewanella baltica OS155]
gi|153000807|ref|YP_001366488.1| DNA gyrase subunit A [Shewanella baltica OS185]
gi|217973234|ref|YP_002357985.1| DNA gyrase subunit A [Shewanella baltica OS223]
gi|386341012|ref|YP_006037378.1| DNA gyrase subunit A [Shewanella baltica OS117]
gi|418025311|ref|ZP_12664290.1| DNA gyrase, A subunit [Shewanella baltica OS625]
gi|125997488|gb|ABN61563.1| DNA gyrase subunit A [Shewanella baltica OS155]
gi|151365425|gb|ABS08425.1| DNA gyrase, A subunit [Shewanella baltica OS185]
gi|217498369|gb|ACK46562.1| DNA gyrase, A subunit [Shewanella baltica OS223]
gi|334863413|gb|AEH13884.1| DNA gyrase, A subunit [Shewanella baltica OS117]
gi|353535295|gb|EHC04858.1| DNA gyrase, A subunit [Shewanella baltica OS625]
Length = 916
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/874 (54%), Positives = 626/874 (71%), Gaps = 35/874 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDFVPNYDGTELIPAVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 181 NIPPHNLTEVVKGCLALIEEPSLSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RA +E + R II+ E+PYQVNK L+EKI++LVK+KKLE IS LRDESDK G
Sbjct: 241 IMRALADVETEDN-GRERIIVTEIPYQVNKARLIEKIAELVKDKKLEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP +AK K++E W L V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWELGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + + Y L++ QAQ IL++ L RLT +E KII +
Sbjct: 420 Q---GMLEKAGDDAARPEWLEPQYGIRDGQYFLTEQQAQAILELRLHRLTGLEHDKIIAE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+I +EL I ++YG + RR+ I N ++ S EDL
Sbjct: 477 YEELLEFIAGLLFILRSPERLMEVIKEELVQILDEYG----DARRTVINANEVDMSLEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K QP+++Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 533 INEEDVVVTLSHLGYAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR +RG+PI+N+ L + E+IT ILP+ R++ + Y+ M+
Sbjct: 593 SDFGKMYWLKVYQLPLASRTARGRPIVNLLPLSDGERITAILPV----REYAADKYIIMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L+ +SNPR +GIIAVNL + D LIG +T+G +IMLFS+ GK VRF E
Sbjct: 649 TSHGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFGEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
S+R MGR+A GV G+RLE+ QKV++L+V ++LT T
Sbjct: 709 VRDSETGEVKTDPETGEEVLSLRPMGRTATGVRGIRLEEGQKVVSLIVPKGDG-AILTVT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT + EY +R TKG++SIK ++RNG VV A V E+MLI+ G L+RT
Sbjct: 768 ENGYGKRTQLSEYPAKSRATKGVVSIKVSERNGAVVGAVQVGLNDELMLISDKGTLVRTP 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ +GR+TQGV +I K+ G+QR+ +I
Sbjct: 828 AGGVSIIGRNTQGVTIIRTAGDEKVVGLQRIDEI 861
>gi|343515357|ref|ZP_08752415.1| DNA gyrase, A subunit [Vibrio sp. N418]
gi|342798516|gb|EGU34123.1| DNA gyrase, A subunit [Vibrio sp. N418]
Length = 886
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/855 (54%), Positives = 638/855 (74%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+++VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+ ELL DL+KET+DF+ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAGELLTDLEKETVDFVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-ETEKNGRETIIVSEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL +GQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDHGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KARE AHILE L +AL NID I++IR+ +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELKKARERAHILEALALALANIDEIIELIRNAATPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 AAMLESAGNDAARPDWLEPEFGIRDGQ----YFLTETQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ YG + RR+EI + + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELELVREAYG----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+S +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILPVS----EFSADKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL ++D LIG +TDG DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITDGQSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GMRL + +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMRLADEDQVVSLIVPSNEG-DILTVTQNGYGKRTELSEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ +I
Sbjct: 827 AADENVVGLQRIDEI 841
>gi|417319539|ref|ZP_12106097.1| DNA gyrase subunit A [Vibrio parahaemolyticus 10329]
gi|328474729|gb|EGF45534.1| DNA gyrase subunit A [Vibrio parahaemolyticus 10329]
Length = 878
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/852 (54%), Positives = 626/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-EKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I +IR TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGIRDGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILA 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ + + RR+EI + + E+
Sbjct: 476 EYKELLEEIAELMHILASTERLMEVIREELEAVRDGFA----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L++ E+IT ILP+ +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEDGERITAILPVD----EFSADKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +T GS DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIAVNLRDDDSLIGVDITTGSSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLADDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDESVVGLQRI 838
>gi|28898706|ref|NP_798311.1| DNA gyrase subunit A [Vibrio parahaemolyticus RIMD 2210633]
gi|153839549|ref|ZP_01992216.1| DNA gyrase, A subunit [Vibrio parahaemolyticus AQ3810]
gi|260363695|ref|ZP_05776479.1| DNA gyrase, A subunit [Vibrio parahaemolyticus K5030]
gi|260879738|ref|ZP_05892093.1| DNA gyrase, A subunit [Vibrio parahaemolyticus AN-5034]
gi|260898788|ref|ZP_05907229.1| DNA gyrase, A subunit [Vibrio parahaemolyticus Peru-466]
gi|260901601|ref|ZP_05909996.1| DNA gyrase, A subunit [Vibrio parahaemolyticus AQ4037]
gi|28806924|dbj|BAC60195.1| DNA gyrase, subunit A [Vibrio parahaemolyticus RIMD 2210633]
gi|149746930|gb|EDM57918.1| DNA gyrase, A subunit [Vibrio parahaemolyticus AQ3810]
gi|308086608|gb|EFO36303.1| DNA gyrase, A subunit [Vibrio parahaemolyticus Peru-466]
gi|308093282|gb|EFO42977.1| DNA gyrase, A subunit [Vibrio parahaemolyticus AN-5034]
gi|308108685|gb|EFO46225.1| DNA gyrase, A subunit [Vibrio parahaemolyticus AQ4037]
gi|308113396|gb|EFO50936.1| DNA gyrase, A subunit [Vibrio parahaemolyticus K5030]
Length = 878
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/852 (54%), Positives = 626/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-EKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I +IR TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGIRDGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILA 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ + + RR+EI + + E+
Sbjct: 476 EYKELLEEIAELMHILASTERLMEVIREELEAVRDGFA----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L++ E+IT ILP+ +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEDGERITAILPVD----EFSADKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +T GS DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIAVNLRDDDSLIGVDITTGSSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLADDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDESVVGLQRI 838
>gi|117617684|ref|YP_856853.1| DNA gyrase subunit A [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117559091|gb|ABK36039.1| DNA gyrase, A subunit [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 915
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/922 (51%), Positives = 641/922 (69%), Gaps = 50/922 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N + +I++L+ I PDFPT GII G S + Y TG+G V
Sbjct: 181 NIPPHNLTEIVNGCLALIENGDLTIDELMTYITGPDFPTGGIINGRSGIVQAYRTGRGSV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + +R II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E EIVLN LYK TQ+Q TFG+NM+AL N QPK++NLKEIL F+LHR+E
Sbjct: 301 MRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINMVALDNNQPKVMNLKEILDAFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL +AL NID I++IR ++TP +AK ++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAVALANIDPVIELIRHSATPADAKAGLVARGWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ Y L++ QAQ IL + L +LT +E +KI+ +Y+
Sbjct: 421 ASMLEKAGDDAARPEWLEPEFGIREGHYY-LTEQQAQAILDLRLHKLTGLEHEKILEEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + +L IL++ R++E+I DEL ++ +YG RR+EI +++ + EDLI
Sbjct: 480 SLLDLIAELLFILASPVRLMEVIRDELLAVREQYGDE----RRTEISMSSAEINIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED++ +L +ANTHD ILCFS
Sbjct: 536 PEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILCFST 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+Q+P+ SR +RG+PIIN+ L E+IT ILP+ +++ + YVF +T+
Sbjct: 596 RGKVYWLKVYQLPEASRGARGRPIINLLPLDEGERITAILPV----KEYDADKYVFFATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS- 719
G VKKT LS+FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRF E S
Sbjct: 652 NGTVKKTSLSDFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFAEGSG 711
Query: 720 -------------------------------------VRAMGRSARGVIGMRLEKKQKVI 742
VR MGR+A GV G++L KV+
Sbjct: 712 RADADATDEVDTDDDAGNDDDGSDNGEGTESKGTFKGVRPMGRTAAGVRGIKLGAGDKVV 771
Query: 743 ALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
+L+V ++LTATENGYGKRT + EY +RGT+G+ISIK ++RNGKV+ A V
Sbjct: 772 SLIVPRGDG-AILTATENGYGKRTALDEYPTKSRGTQGVISIKVDERNGKVIDAIQVEDT 830
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPVI 862
+IMLIT GG L+RTRVSE+ +GR+T GV LI + G+QR+ + + V+
Sbjct: 831 DQIMLITNGGTLVRTRVSEVSVIGRNTGGVRLIRTGEDETVVGLQRVAESDEDEN--EVL 888
Query: 863 TIDGPTASGKGTVAQLVASKLG 884
++G + G T A A G
Sbjct: 889 AVEGEVSEGTDTAADTGAVDAG 910
>gi|423206592|ref|ZP_17193148.1| DNA gyrase subunit A [Aeromonas veronii AMC34]
gi|404622144|gb|EKB19009.1| DNA gyrase subunit A [Aeromonas veronii AMC34]
Length = 920
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/930 (50%), Positives = 642/930 (69%), Gaps = 61/930 (6%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N + +I++L+ I PDFPT GII G S + Y TG+G +
Sbjct: 181 NIPPHNLTEIVNGCLALIENGDLTIDELMTYITGPDFPTGGIINGRSGIVQAYRTGRGSI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + +R II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E EIVLN LYK TQ+Q TFG+NM+AL N QPK++NLKEIL F+LHR+E
Sbjct: 301 MRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINMVALDNNQPKVMNLKEILDAFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL +AL NID I++IR ++TP +AK ++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAVALANIDPIIELIRHSATPADAKAGLVAKGWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 421 AAMLEKAGDDAARPEWLEPEFGIREGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y++++ + +L IL++ R++E+I DEL ++ +YG RR+EI +++ + ED
Sbjct: 477 EYQSLLDLIAELLHILASPARLMEVIRDELLAVREQYGDE----RRTEISMSSAEINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED++ +L +ANTHD ILC
Sbjct: 533 LITPEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G++YWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ +++ YVF
Sbjct: 593 FSTRGKVYWLKVYQLPEASRGARGRPIINLLPLEEGERITAILPV----KEYDAEKYVFF 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS+FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRF E
Sbjct: 649 ATANGTVKKTSLSDFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFAE 708
Query: 718 NS-------------------------------------------VRAMGRSARGVIGMR 734
S VR MGR+A GV G++
Sbjct: 709 GSGRSETDRADADVSDDVETDDDAGNDDDGSDNGEGTESKGTFKGVRPMGRTAAGVRGIK 768
Query: 735 LEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVV 794
L KV++L+V + ++LTATENGYGKRT + EY +RGT+G+ISIK ++RNGKV+
Sbjct: 769 LGAGDKVVSLIVPRGEG-AILTATENGYGKRTALDEYPTKSRGTQGVISIKVDERNGKVI 827
Query: 795 AATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITM 854
A V +IMLIT GG L+RTRV+E+ +GR+T GV LI + G+QR+ +
Sbjct: 828 DAIQVEDTDQIMLITNGGTLVRTRVAEVSVIGRNTGGVRLIRTGEDETVVGLQRIAESDE 887
Query: 855 IKKYIPVITIDGPTASGKGTVAQLVASKLG 884
+ + +DG + G T A G
Sbjct: 888 DEN--DALAVDGEVSEGTDTATGTDAVDAG 915
>gi|423690704|ref|ZP_17665224.1| DNA gyrase, A subunit [Pseudomonas fluorescens SS101]
gi|388000284|gb|EIK61613.1| DNA gyrase, A subunit [Pseudomonas fluorescens SS101]
Length = 884
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/850 (52%), Positives = 633/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV+E+ +GR+TQGV LI +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAK 830
Query: 840 KSKLCGVQRL 849
KL G++R+
Sbjct: 831 DEKLVGLERV 840
>gi|343504515|ref|ZP_08742226.1| DNA gyrase, A subunit [Vibrio ichthyoenteri ATCC 700023]
gi|342811373|gb|EGU46416.1| DNA gyrase, A subunit [Vibrio ichthyoenteri ATCC 700023]
Length = 885
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/852 (54%), Positives = 635/852 (74%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+++VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+ ELL DLDKET+DF+ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAGELLTDLDKETVDFVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++N + +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAYINNEDITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-ETEKNGRETIIVSEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL +GQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDHGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KARE AHILE L +AL NID I++IR+ +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELKKARERAHILEALALALANIDEIIELIRNAATPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 AAMLESAGNDAARPDWLEPEYGIRDGQ----YFLTETQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ YG + RR+EI + + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELELVREAYG----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L++ E+IT ILP+S +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEDGERITAILPVS----EFSAEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL ++D LIG +TDG DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTPLNQFANVRANGLIAVNLRDDDSLIGVDITDGQSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GMRL +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTASGVRGMRLAGDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 ATDENVVGLQRI 838
>gi|421497870|ref|ZP_15945018.1| DNA gyrase subunit A [Aeromonas media WS]
gi|407183193|gb|EKE57102.1| DNA gyrase subunit A [Aeromonas media WS]
Length = 926
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/931 (50%), Positives = 645/931 (69%), Gaps = 62/931 (6%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD+++YD +VRMAQ FS+R LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++P LLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPTLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N +I++L+ + PDFPT GII G S + Y TG+G V
Sbjct: 181 NIPPHNLTEIVNGCLALIENGALTIDELMTYVTGPDFPTGGIINGRSGIVQAYRTGRGSV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + +R II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E EIVLN LYK TQ+Q TFG+NM+AL N QPK++NLKEIL F+LHR+E
Sbjct: 301 MRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINMVALDNNQPKVMNLKEILDAFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL +AL NID I++IR ++TP +AK ++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAVALANIDPIIELIRHSATPADAKAGLVAKGWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Q Y L++IQAQ IL + L +LT +E +KI+
Sbjct: 421 AAMLEKAGDDAARPEWLEPEFGIREGQ----YFLTEIQAQAILDLRLHKLTGLEHEKILE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y++++ + +L IL++ +R++E+I DEL ++ +YG RR+EI +++ + ED
Sbjct: 477 EYQSLLDLIAELLFILASPERLMEVIRDELLAVREQYGDE----RRTEISMSSAEINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED++ +L +ANTHD ILC
Sbjct: 533 LITPEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G++YWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ +++ YVF
Sbjct: 593 FSTRGKVYWLKVYQLPEASRGARGRPIINLLPLEEGERITAILPV----KEYDAEKYVFF 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS+FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRFNE
Sbjct: 649 ATANGTVKKTSLSDFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFNE 708
Query: 718 NS--------------------------------------------VRAMGRSARGVIGM 733
S VR MGR+A GV G+
Sbjct: 709 GSGRADAADSDASDDVETDDDAGNDEDGSDNGESTEGTESKGTFKGVRPMGRTAAGVRGI 768
Query: 734 RLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKV 793
+L KV++L+V ++LTATENGYGKRT + EY +RGT+G+ SIK ++RNGKV
Sbjct: 769 KLGAGDKVVSLIVPRGVG-AILTATENGYGKRTALDEYPTKSRGTQGVRSIKVDERNGKV 827
Query: 794 VAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKIT 853
+ A V +IMLIT GG L+RTRV+E+ +GR+T GV LI + G+QR+ +
Sbjct: 828 IDAIQVEDTDQIMLITNGGTLVRTRVAEVSVIGRNTGGVRLIRTGEDETVVGLQRIAESD 887
Query: 854 MIKKYIPVITIDGPTASGKGTVAQLVASKLG 884
++ ++ +DG + G T ++ G
Sbjct: 888 --EEENDIVAVDGEVSEGTDTAPDAGSADAG 916
>gi|291326671|ref|ZP_06125386.2| DNA gyrase, A subunit [Providencia rettgeri DSM 1131]
gi|291313392|gb|EFE53845.1| DNA gyrase, A subunit [Providencia rettgeri DSM 1131]
Length = 898
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/854 (54%), Positives = 627/854 (73%), Gaps = 16/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 33 MSEIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 92
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++Y+ +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 93 KPYKKSARIVGDVIGKYHPHGDSAVYETIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 152
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYDG E+ P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 153 RYTEIRMAKIAHELLADLEKETVDFVPNYDGTEQIPEVMPTKIPNLLVNGSSGIAVGMAT 212
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + + SI L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 213 NIPPHNLGEVINGCLAYIEDEDISIEGLMEHIPGPDFPTAAIINGRRGIIDAYRTGRGKV 272
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 273 YIRASAEVEVDEKNGRETIIVSEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 332
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+LNLK+I+ F+ HR+E
Sbjct: 333 MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILNLKDIIAAFVRHRRE 392
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 393 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRKAPTPAEAKAGLIARSWDLGNV 452
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y L++ QAQ IL + LQ+LT +E +K++
Sbjct: 453 AAMLERAGDDAARPEWLEPQFGVHEGQ----YFLTEQQAQAILDLRLQKLTGLEHEKLLE 508
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y +++ ++ L IL + +R++E+I +EL II++ Y + RR+EI N + + ED
Sbjct: 509 EYRDLLVQIEALLFILRSPERLMEVIREELEIIRDTY----NDPRRTEITENTADINIED 564
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A TKDED+I +L +ANTHD ILC
Sbjct: 565 LINQEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARTKDEDFIERLLVANTHDTILC 624
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM
Sbjct: 625 FSSRGRLYWMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPV----REYEEGYNVFM 680
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L FS PR +GIIAVNL+ D LIG LTDGS ++MLFS GK VRF E
Sbjct: 681 ATASGTVKKTPLQEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAQGKVVRFAE 740
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
++VR MGR+A GV G++L KV++L++ + +LT TENGYGKRT EY +R
Sbjct: 741 DAVRPMGRTATGVRGIKLMDNDKVVSLIIPRGEGH-ILTVTENGYGKRTEEAEYPTKSRA 799
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ISIK ++RNG VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 800 TQGVISIKVSERNGNVVGAIQVDETDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRT 859
Query: 838 ENKSKLCGVQRLCK 851
K+ G+QR+ +
Sbjct: 860 AEDEKVVGLQRVAE 873
>gi|407470116|ref|YP_006783441.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407481221|ref|YP_006778370.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481768|ref|YP_006769314.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417805791|ref|ZP_12452740.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. LB226692]
gi|417863447|ref|ZP_12508495.1| gyrA [Escherichia coli O104:H4 str. C227-11]
gi|422988349|ref|ZP_16979122.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. C227-11]
gi|422995240|ref|ZP_16986004.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. C236-11]
gi|423010557|ref|ZP_17001291.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-3677]
gi|423019784|ref|ZP_17010493.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4404]
gi|423024951|ref|ZP_17015648.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4522]
gi|423030772|ref|ZP_17021460.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4623]
gi|423038598|ref|ZP_17029272.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423043717|ref|ZP_17034384.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045446|ref|ZP_17036106.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423053985|ref|ZP_17042792.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423060960|ref|ZP_17049756.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4632 C5]
gi|429719829|ref|ZP_19254760.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-9450]
gi|429771711|ref|ZP_19303734.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02030]
gi|429781643|ref|ZP_19313572.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785383|ref|ZP_19317281.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02092]
gi|429791272|ref|ZP_19323129.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02093]
gi|429797099|ref|ZP_19328907.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02281]
gi|429798697|ref|ZP_19330498.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02318]
gi|429807210|ref|ZP_19338937.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02913]
gi|429812110|ref|ZP_19343796.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-03439]
gi|429817630|ref|ZP_19349271.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-04080]
gi|429822841|ref|ZP_19354439.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-03943]
gi|429904221|ref|ZP_19370200.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908358|ref|ZP_19374322.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914229|ref|ZP_19380177.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919260|ref|ZP_19385192.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925079|ref|ZP_19390993.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929016|ref|ZP_19394918.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935555|ref|ZP_19401441.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941235|ref|ZP_19407109.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-5603]
gi|429943915|ref|ZP_19409778.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951515|ref|ZP_19417361.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec12-0465]
gi|429954827|ref|ZP_19420659.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec12-0466]
gi|432809884|ref|ZP_20043777.1| DNA gyrase subunit A [Escherichia coli KTE101]
gi|340739703|gb|EGR73935.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. LB226692]
gi|341916736|gb|EGT66353.1| gyrA [Escherichia coli O104:H4 str. C227-11]
gi|354862075|gb|EHF22513.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. C236-11]
gi|354867360|gb|EHF27782.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. C227-11]
gi|354880040|gb|EHF40376.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-3677]
gi|354889464|gb|EHF49713.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4404]
gi|354893059|gb|EHF53263.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4522]
gi|354895196|gb|EHF55385.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354897470|gb|EHF57628.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4623]
gi|354898831|gb|EHF58982.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354912882|gb|EHF72880.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354915887|gb|EHF75863.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354917802|gb|EHF77764.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-4632 C4]
gi|406776930|gb|AFS56354.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053518|gb|AFS73569.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 2011C-3493]
gi|407066151|gb|AFS87198.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429346220|gb|EKY83001.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02033-1]
gi|429348972|gb|EKY85728.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02092]
gi|429361194|gb|EKY97851.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02030]
gi|429362625|gb|EKY99272.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02093]
gi|429362896|gb|EKY99541.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02281]
gi|429366014|gb|EKZ02626.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02318]
gi|429376869|gb|EKZ13397.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-02913]
gi|429379343|gb|EKZ15844.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-03439]
gi|429380911|gb|EKZ17400.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-03943]
gi|429393132|gb|EKZ29531.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 11-04080]
gi|429405233|gb|EKZ41499.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-4984]
gi|429406999|gb|EKZ43253.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-9990]
gi|429410747|gb|EKZ46968.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-9450]
gi|429414459|gb|EKZ50634.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-4987]
gi|429421068|gb|EKZ57190.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-4986]
gi|429429402|gb|EKZ65471.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-5604]
gi|429432089|gb|EKZ68129.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436295|gb|EKZ72311.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-5603]
gi|429438500|gb|EKZ74493.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-6006]
gi|429448122|gb|EKZ84039.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451840|gb|EKZ87728.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec11-9941]
gi|429457784|gb|EKZ93622.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. Ec12-0466]
gi|431362652|gb|ELG49230.1| DNA gyrase subunit A [Escherichia coli KTE101]
Length = 875
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDAAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|262274466|ref|ZP_06052277.1| DNA gyrase subunit A [Grimontia hollisae CIP 101886]
gi|262221029|gb|EEY72343.1| DNA gyrase subunit A [Grimontia hollisae CIP 101886]
Length = 875
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/849 (53%), Positives = 628/849 (73%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P V+PTRIPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPEVMPTRIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + N + +I +L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCLAYIENEDITIEELMTHIPGPDFPTAAMINGRKGIEDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + I++ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YLRSKADIET-DKNGKETIVVTEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E++LN LY QTQLQ +FG+NM+AL N QP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVAEVILNNLYAQTQLQTSFGINMVALDNNQPRLFNLKDMLKCFVNHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR+ TP A+ + W+L V
Sbjct: 360 VVTRRTIFELRKARDRAHILEGLAIALANIDEIIELIRNAQTPAVAREALQNRGWDLGTV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ Y L++ QAQ IL + L +LT +E +KI+++Y+
Sbjct: 420 AVMLEATGVDAARPEWLEDEFGVRDGKYY-LTEQQAQAILDLRLHKLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L ILS+ +R++E+I +EL +++ +G RR+EI + + EDLI
Sbjct: 479 ELLTLIGELMFILSSPERLMEVIREELEAVRDGFGDE----RRTEITAASADIDIEDLIN 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS
Sbjct: 535 QEDVVVTLSHEGYVKYQPLTDYEAQRRGGKGKSATRMKEEDFIERLLVANTHDTILCFST 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ +++ + +VFM+TS
Sbjct: 595 RGRMYWLKVYQLPLASRTARGKPIVNLLPLEQDERITAILPV----KEYEDDKFVFMATS 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIAVNL D LIG +T G D+MLFS SGK VRF+E+ V
Sbjct: 651 DGTVKKTPLTDFSRPRSAGIIAVNLREGDSLIGVDITWGDNDVMLFSKSGKVVRFHESQV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + KV++L+V +N+ VLT TENGYGKRT + EY +R T+G
Sbjct: 711 RAMGRTAAGVRGIKLAEGDKVVSLIVPHNEG-DVLTVTENGYGKRTELCEYPAKSRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V+ +E M+IT GG L+RTRV+E+ ++GR+TQGV LI
Sbjct: 770 VVSIKVSERNGCVVGAVQVDTGYEFMMITNGGTLVRTRVAEVSQVGRNTQGVRLIRTSEG 829
Query: 841 SKLCGVQRL 849
++ G+QR+
Sbjct: 830 ERVVGLQRI 838
>gi|444378763|ref|ZP_21177953.1| DNA gyrase subunit A [Enterovibrio sp. AK16]
gi|443677105|gb|ELT83796.1| DNA gyrase subunit A [Enterovibrio sp. AK16]
Length = 877
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/849 (54%), Positives = 622/849 (73%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P V+PTRIPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPEVMPTRIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + +I +L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIENEDITIEELMTHIPGPDFPTAAMINGRKGIEDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YLRSKADI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E++LN LY QTQLQ +FG+NM+AL N QP+L LK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVILNNLYAQTQLQTSFGINMVALDNNQPRLFGLKDMLKCFVNHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL IAL NID I++IR+ TP A+ ++ W L V
Sbjct: 360 VVTRRTIFELRKARDRAHILEGLAIALANIDEIIEMIRNAQTPAIAREELQNRGWELGTV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ Y L++ QAQ IL + L +LT +E +KI+++Y+
Sbjct: 420 AAMLEATGVDAARPEWLEDEFGVRDGKYY-LTEQQAQAILDLRLHKLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L ILS+ +R++E+IT+EL +++ +G RR+EI + + EDLI
Sbjct: 479 ELLALIGELMFILSSPERLMEVITEELTAVRDGFGDE----RRTEITAASADIDIEDLIN 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPLTDYEAQRRGGKGKSATRMKEEDYIERLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ +++ ++ +VFM+T
Sbjct: 595 RGRMYWLKVYQLPLASRTARGKPIVNLLPLEQDERITAILPV----KEYEEDKFVFMATG 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++FS PR +GIIAVNL D LIG +T G DIMLFS SGK VRFNE V
Sbjct: 651 DGTVKKTPLTDFSRPRSAGIIAVNLRENDSLIGVDITTGDNDIMLFSKSGKVVRFNEGQV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G++L + KV++L+V +N VLT TENGYGKRT + EY +R T+G
Sbjct: 711 RGMGRTAAGVRGIKLAEGDKVVSLIVPHNDG-DVLTVTENGYGKRTELVEYPAKSRATQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
++SIK ++RNG VV A V E M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 770 VVSIKVSERNGCVVGAVQVETGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRTSED 829
Query: 841 SKLCGVQRL 849
K+ G+QR+
Sbjct: 830 EKVVGLQRI 838
Score = 47.4 bits (111), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 544 MVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGR 603
V + G +K P++++ + G A+ ++ D + + I + I+ FS G+
Sbjct: 644 FVFMATGDGTVKKTPLTDFSRPRSAG--IIAVNLRENDSLIGVDITTGDNDIMLFSKSGK 701
Query: 604 LYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGI 663
+ Q+ R + G + L +K+ V L + +N D V T G
Sbjct: 702 VVRFNEGQVRGMGRTAAG---VRGIKLAEGDKV-VSLIVPHNDGD------VLTVTENGY 751
Query: 664 VKKTLLSNFSNPRKS----GIIAVNLSNED-FLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
K+T L + P KS G++++ +S + ++GA + + M+ +++G VR
Sbjct: 752 GKRTELVEY--PAKSRATQGVVSIKVSERNGCVVGAVQVETGDEFMMITNAGTLVRTRVA 809
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENG 761
V +GR+ +GV +R + +KV+ L + + +L E+G
Sbjct: 810 EVSQVGRNTQGVTLIRTSEDEKVVGLQRIDEPDEELLPLDEDG 852
>gi|188495176|ref|ZP_03002446.1| DNA gyrase, A subunit [Escherichia coli 53638]
gi|194436036|ref|ZP_03068138.1| DNA gyrase, A subunit [Escherichia coli 101-1]
gi|251785593|ref|YP_002999897.1| DNA gyrase, subunit A, subunit of DNA gyrase [Escherichia coli
BL21(DE3)]
gi|253772846|ref|YP_003035677.1| DNA gyrase subunit A [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162242|ref|YP_003045350.1| DNA gyrase subunit A [Escherichia coli B str. REL606]
gi|254289003|ref|YP_003054751.1| DNA gyrase subunit A [Escherichia coli BL21(DE3)]
gi|300931424|ref|ZP_07146753.1| DNA gyrase, A subunit [Escherichia coli MS 187-1]
gi|422786848|ref|ZP_16839587.1| hypothetical protein ERGG_01998 [Escherichia coli H489]
gi|422790513|ref|ZP_16843217.1| hypothetical protein ERHG_00995 [Escherichia coli TA007]
gi|442598033|ref|ZP_21015807.1| DNA gyrase subunit A [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|188490375|gb|EDU65478.1| DNA gyrase, A subunit [Escherichia coli 53638]
gi|194424764|gb|EDX40749.1| DNA gyrase, A subunit [Escherichia coli 101-1]
gi|242377866|emb|CAQ32633.1| DNA gyrase, subunit A, subunit of DNA gyrase [Escherichia coli
BL21(DE3)]
gi|253323890|gb|ACT28492.1| DNA gyrase, A subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974143|gb|ACT39814.1| DNA gyrase subunit A [Escherichia coli B str. REL606]
gi|253978310|gb|ACT43980.1| DNA gyrase subunit A [Escherichia coli BL21(DE3)]
gi|300460794|gb|EFK24287.1| DNA gyrase, A subunit [Escherichia coli MS 187-1]
gi|323961537|gb|EGB57145.1| hypothetical protein ERGG_01998 [Escherichia coli H489]
gi|323973067|gb|EGB68261.1| hypothetical protein ERHG_00995 [Escherichia coli TA007]
gi|441653307|emb|CCQ01510.1| DNA gyrase subunit A [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 875
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V + ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGEG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|389798957|ref|ZP_10201965.1| DNA gyrase subunit A [Rhodanobacter sp. 116-2]
gi|388444312|gb|EIM00432.1| DNA gyrase subunit A [Rhodanobacter sp. 116-2]
Length = 857
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/850 (54%), Positives = 626/850 (73%), Gaps = 14/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKEVI + +E+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N+WN
Sbjct: 1 MAELAKEVIRVNIEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD S+YDA+VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDQSVYDAIVRMAQPFSLRYLLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++ELL D+DKET+DF NYD E EP VLPTR+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMSRLTHELLADIDKETVDFGPNYDESEHEPLVLPTRVPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI + ++ P SI++L+ IP PDFPT GII G S + + Y TG+GR+
Sbjct: 181 NIPPHNLNEVIAATIALIDEPTLSIDELMHYIPGPDFPTHGIINGSSGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIE-EFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
++RAK IE E N R II+ ELPYQVNK L+EKI++LVKEKKLE IS LRDESDK
Sbjct: 241 LVRAKAEIETESN--GRETIIVHELPYQVNKARLIEKIAELVKEKKLEGISELRDESDKD 298
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIE++++ + ++VLN L++QTQLQ TFG+NM+AL++GQPKLLNLK+IL FI HR+
Sbjct: 299 GMRVVIEIRKDAMGDVVLNNLFQQTQLQVTFGINMVALLDGQPKLLNLKDILEAFIRHRR 358
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRTIF+LRKAR AHILEGLT+AL NID I++I+++S+P EA+ +++ W
Sbjct: 359 EVVTRRTIFDLRKARARAHILEGLTVALANIDEMIELIKTSSSPAEARERMVARRWEAGL 418
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + ++ L+ +D Y+LS+ QA EIL M L RLT +EQ+K+ ++Y
Sbjct: 419 VRALLSATGADASRPEDMDPRDGLK-DDGYQLSEAQALEILAMRLHRLTGLEQEKLSDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+++ + L +IL N R++E+I +EL +K ++G + RR+EI + + + DLI
Sbjct: 478 RQILETIRGLIEILENPNRLLEVIREELEAVKAEFG----DARRTEIQHSQEDLNVLDLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS+ GY+K QP S YRAQ+RGG+G+ A KDED + QL++ NTHD +L F+
Sbjct: 534 APEDMVVTLSHTGYVKRQPASTYRAQRRGGKGRSASALKDEDVVEQLWVVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YWLKV+QIP+ +RGKPIIN+ L EK+ +LP+ R++ + YVF +T
Sbjct: 594 STGRVYWLKVYQIPEAGPGARGKPIINLLPLGEGEKVQAVLPV----REYSDDRYVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT L+ F+ + G A+ L D L+ LTDG+ DI+LF+ +GK RF+EN+
Sbjct: 650 RHGTVKKTPLTEFAYQLQKGKQAIKLDEGDALVNVELTDGNSDILLFASNGKVNRFDENT 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR+MGR+A GV GM+L +V++L+V+ + +LTAT GYGKRT + E+ K RGT+
Sbjct: 710 VRSMGRTATGVRGMKLVGGAEVVSLIVA--AEGDILTATARGYGKRTELAEFAKKGRGTQ 767
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I I+ ++RNG +VAA V HE+MLI+ G L+RTRV+E+ ++GR+TQGV LI +
Sbjct: 768 GVIGIQCSERNGALVAAVQVTEAHELMLISDKGTLVRTRVAEVSQLGRNTQGVTLIRLPA 827
Query: 840 KSKLCGVQRL 849
L V RL
Sbjct: 828 DETLVSVMRL 837
>gi|384543887|ref|YP_005727950.1| DNA gyrase subunit A [Shigella flexneri 2002017]
gi|281601673|gb|ADA74657.1| DNA gyrase subunit A [Shigella flexneri 2002017]
Length = 875
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 641/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|160875516|ref|YP_001554832.1| DNA gyrase subunit A [Shewanella baltica OS195]
gi|378708714|ref|YP_005273608.1| DNA gyrase subunit A [Shewanella baltica OS678]
gi|160861038|gb|ABX49572.1| DNA gyrase, A subunit [Shewanella baltica OS195]
gi|315267703|gb|ADT94556.1| DNA gyrase, A subunit [Shewanella baltica OS678]
Length = 916
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/874 (54%), Positives = 625/874 (71%), Gaps = 35/874 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDFVPNYDGTELIPAVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 181 NIPPHNLTEVVKGCLALIEEPSLSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RA +E + R II+ E+PYQVNK L+EKI++LVK+KKLE IS LRDESDK G
Sbjct: 241 IMRALADVETEDN-GRERIIVTEIPYQVNKARLIEKIAELVKDKKLEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP +AK K++E W L V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWELGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + + Y L++ QAQ IL++ L RLT +E KII +
Sbjct: 420 Q---GMLEKAGDDAARPEWLEPQYGIRDGQYFLTEQQAQAILELRLHRLTGLEHDKIIAE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+I +EL I +YG + RR+ I N ++ S EDL
Sbjct: 477 YEELLEFIAGLLFILRSPERLMEVIKEELVQILEEYG----DARRTVINANEVDMSLEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K QP+++Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 533 INEEDVVVTLSHLGYAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR +RG+PI+N+ L + E+IT ILP+ R++ + Y+ M+
Sbjct: 593 SDFGKMYWLKVYQLPLASRTARGRPIVNLLPLSDGERITAILPV----REYAADKYIIMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L+ +SNPR +GIIAVNL + D LIG +T+G +IMLFS+ GK VRF E
Sbjct: 649 TSHGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFGEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
S+R MGR+A GV G+RLE+ QKV++L+V ++LT T
Sbjct: 709 VRDSETGEVKTDPETGEEVLSLRPMGRTATGVRGIRLEEGQKVVSLIVPKGDG-AILTVT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENGYGKRT + EY +R TKG++SIK ++RNG VV A V E+MLI+ G L+RT
Sbjct: 768 ENGYGKRTQLSEYPAKSRATKGVVSIKVSERNGAVVGAVQVGLNDELMLISDKGTLVRTP 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ +GR+TQGV +I K+ G+QR+ +I
Sbjct: 828 AGGVSIIGRNTQGVTIIRTAGDEKVVGLQRIDEI 861
>gi|218548315|ref|YP_002382106.1| DNA gyrase subunit A [Escherichia fergusonii ATCC 35469]
gi|218355856|emb|CAQ88469.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia
fergusonii ATCC 35469]
Length = 878
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/886 (52%), Positives = 641/886 (72%), Gaps = 23/886 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLVAS 881
+ G+QR+ + PV TIDG A G +A V S
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEVES 868
>gi|24373958|ref|NP_718001.1| DNA gyrase subunit GyrA [Shewanella oneidensis MR-1]
gi|24348396|gb|AAN55445.1| DNA gyrase subunit GyrA [Shewanella oneidensis MR-1]
Length = 919
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/880 (54%), Positives = 630/880 (71%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+D++ NYDG E+ P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ +P SI L+ IP PDFPTA II G + D Y TG+GR
Sbjct: 181 NIPPHNLTEVVKGCLALIADPALSIEQLMDYIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
I+RA +E EN R II+ E+PYQVNK L+EKI++LVK+KKLE IS LRDESDK
Sbjct: 241 IMRALAEVE--TEENGRERIIVTEIPYQVNKARLIEKIAELVKDKKLEGISGLRDESDKD 298
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+
Sbjct: 299 GMRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRR 358
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP +AK K++E W L
Sbjct: 359 EVVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGH 418
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
V G +K + ++ + + +Y L++ QAQ IL++ L RLT +E KII
Sbjct: 419 VQ---GMLEKAGDDAARPEWLEPEYGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIA 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+YE +++ + L IL + +R++E+I +EL I +YG + RR+ I N I+ S ED
Sbjct: 476 EYEELLEFIAGLLFILRSPERLMEVIKEELEEILAEYG----DARRTVINANEIDMSLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+LGY K QP+S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILC
Sbjct: 532 LINEEDVVVTLSHLGYAKYQPLSDYQAQRRGGKGKVATKVKDEDFVEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS++G++YWLKV+Q+P SR SRG+PI+N+ L + E+IT ILP+ R++ ++ Y+ M
Sbjct: 592 FSDFGKMYWLKVYQLPLASRTSRGRPIVNLLPLADGERITAILPV----REYAEDKYIIM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+TS G VKKT L+ +SNPR +GIIAVNL + D LIG +T+G +IMLFS+ GK VRF E
Sbjct: 648 ATSNGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
VR MGR A GV G++LE+ Q+V++L+V +
Sbjct: 708 GEEVAVLDENGNPVLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQRVVSLIVPKDDG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
++LT TENGYGKRT + EY +R TKG++SIK ++RNG VV A V EIMLI+ G
Sbjct: 767 AILTVTENGYGKRTELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RT + + +GR+TQGV +I + K+ G+QR+ +I
Sbjct: 827 TLVRTPANGVSIIGRNTQGVTIIRTASDEKVVGLQRIDEI 866
>gi|386614842|ref|YP_006134508.1| DNA gyrase, A subunit GyrA [Escherichia coli UMNK88]
gi|332344011|gb|AEE57345.1| DNA gyrase, A subunit GyrA [Escherichia coli UMNK88]
Length = 875
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 HGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|54309620|ref|YP_130640.1| DNA topoisomerase (ATP-hydrolyzing) [Photobacterium profundum SS9]
gi|46914058|emb|CAG20838.1| putative DNA topoisomerase (ATP-hydrolyzing) [Photobacterium
profundum SS9]
Length = 894
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/859 (54%), Positives = 624/859 (72%), Gaps = 24/859 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E P V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLDKETVDYVPNYDGTEFIPVVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + N + ++ L+ IP PDFPTA +I G + D Y+TG+G+V
Sbjct: 181 NIPPHNLGEVINGCLAFIDNEDITVEQLMDYIPGPDFPTAALINGRKGIIDAYHTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +I E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRAKANI-EVEKNGRETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E KR+ + E++LN LY QTQLQ TFG+NM+AL +GQPKL LKE+L F+ HR+E
Sbjct: 300 MRIVVECKRDAVGEVILNNLYSQTQLQTTFGINMVALDHGQPKLFGLKEMLKCFVNHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AH+LEGL IAL NID I++I+S TPQ A+ ++ S W L DV
Sbjct: 360 VVTRRTIFELRKARERAHLLEGLAIALVNIDAIIELIKSAPTPQVAREGLLASPWQLGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL++ L RLT +E +KI+
Sbjct: 420 AAMLERGGVDAARPEWLEPQYGIHGGQ----YFLTEPQAQAILELRLHRLTGLEHEKILE 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ + +L IL + +R++E+I DEL+ +K ++ RR+EI + + ED
Sbjct: 476 EYKGLLDVIEELLLILGSPERLMEVIRDELHAVKEQFNDE----RRTEITAASHDIDLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LITQEDVVVTLSHEGYVKYQILSDYEAQRRGGKGKIATRMKDEDFIERLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GR+YWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ + YVFM
Sbjct: 592 FSSRGRMYWLKVYQLPLASRTARGKPIVNILPLEEGERITAILPV----REYEADKYVFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L++FS PR +GIIAVNL + D LIG +T+ + DIMLFS GK VRF E
Sbjct: 648 ATADGTVKKTPLTDFSRPRSAGIIAVNLRDGDSLIGVDITNSTDDIMLFSKFGKVVRFYE 707
Query: 718 NS-------VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKE 770
++ VR MGR+A GV GM+L KV++L+V +N+ VLT TENGYGKRT + E
Sbjct: 708 SADENGKGGVRGMGRTAAGVRGMKLAAGDKVVSLIVPHNEG-DVLTVTENGYGKRTALTE 766
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
Y +R T+G++SIK + RNG VV A E M+IT GG L+RTRV+E+ ++GR+TQ
Sbjct: 767 YPAKSRATQGVVSIKVSDRNGSVVGAVQAEDGDEFMMITNGGTLVRTRVAEVSRVGRNTQ 826
Query: 831 GVILITVENKSKLCGVQRL 849
GV LI +K + G+QR+
Sbjct: 827 GVTLIRTADKELVVGLQRI 845
>gi|312967532|ref|ZP_07781747.1| DNA gyrase, A subunit [Escherichia coli 2362-75]
gi|312287729|gb|EFR15634.1| DNA gyrase, A subunit [Escherichia coli 2362-75]
Length = 875
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|429214717|ref|ZP_19205880.1| DNA gyrase subunit A [Pseudomonas sp. M1]
gi|428155003|gb|EKX01553.1| DNA gyrase subunit A [Pseudomonas sp. M1]
Length = 919
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/895 (50%), Positives = 639/895 (71%), Gaps = 44/895 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDKET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE S+++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPELSVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ + NR III ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARADIEDMEKGGNRQQIIITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L FI HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFIRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+++ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKTSPTPAEAKERLIATPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLREGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N +R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILTLIGELIRILTNPQRLMEVIREELEKVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYEAQRRGGKGKSASGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL----------------- 642
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L +
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEAVRAQFAGEEGDDD 655
Query: 643 ---------------------SNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGII 681
++ +D P Y+FM+T G VKKT L F+ PR +G+I
Sbjct: 656 DVVAEQVAEVVEAEEAEEGDDADFSQDEPTGAYIFMATMKGTVKKTPLIQFTKPRSNGLI 715
Query: 682 AVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKV 741
A+ L D LI AA+TDGS D+M+FSD+GK +RF E+ VR MGR+ARGV GMRL + Q++
Sbjct: 716 ALKLEEGDSLIAAAITDGSKDVMMFSDAGKVIRFKESKVRIMGRNARGVRGMRLAEDQRI 775
Query: 742 IALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNR 801
I++L+ ++ +LTA+E GYGKRT + +Y + RG +G+I++ N+RNGK+V A V
Sbjct: 776 ISMLIPECREAQILTASERGYGKRTPLADYPRRGRGGQGVIAMVINERNGKLVGAVQVLD 835
Query: 802 YHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIK 856
EIMLI+ G L+RTRV E+R GR+TQGVILI + L G++R+ + T+++
Sbjct: 836 GEEIMLISDQGTLVRTRVDEVRGAGRNTQGVILIKLAADETLVGLERVQEPTVVE 890
>gi|417662843|ref|ZP_12312424.1| DNA gyrase subunit A [Escherichia coli AA86]
gi|330912061|gb|EGH40571.1| DNA gyrase subunit A [Escherichia coli AA86]
Length = 875
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 641/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|319787325|ref|YP_004146800.1| DNA gyrase subunit alpha [Pseudoxanthomonas suwonensis 11-1]
gi|317465837|gb|ADV27569.1| DNA gyrase, A subunit [Pseudoxanthomonas suwonensis 11-1]
Length = 868
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/849 (53%), Positives = 631/849 (74%), Gaps = 11/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE+I + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N
Sbjct: 1 MTDLAKEIIPVNLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYYKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYLLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLTHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G+L ++ PE ++ L++ IP PDFPTAGII G+ + Y TG+GRV
Sbjct: 181 NIPPHNLTEVVNGLLALIDEPELDVDALMQYIPGPDFPTAGIINGVGGIQLAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 RIRAKADIEVAD-NGRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQL++ FG+NM+ALV+G+P+L+NLK+IL F+ HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQLESVFGINMVALVDGRPQLVNLKQILEAFLRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I+++ PQ AK ++++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSDNPQVAKERMLDRTWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + L Y+L+++QAQ+IL+M L RLT +EQ+K+ +Y
Sbjct: 420 GALLAATGAEASRPDDLPAGVGLVEG-RYRLTEVQAQQILEMRLHRLTGLEQEKLTEEYR 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + L +IL + + ++++I ELN +K ++G RRSEI + + DLIA
Sbjct: 479 QLLETIRALIEILEDPEVLLQVIRTELNELKAEFGDD----RRSEIRASEEDLDILDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY K QP+S YRAQKRGGRG+ A TKDED+I++L++ NTHD +L F++
Sbjct: 535 PEDVVVTLSHAGYAKRQPVSAYRAQKRGGRGRSAAATKDEDFIDRLWLVNTHDTLLTFTS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++WL V Q+P+ N+RG+PIIN L+ E++ +LP+ R++ + +VF +T
Sbjct: 595 SGKVFWLPVHQLPEAGSNARGRPIINWIPLEEGEQVQAVLPV----REYAEGFFVFFATR 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+ G IA+NL + D L+G ALTDG D+MLF+ +GKAVRF+E+ V
Sbjct: 651 NGTVKKTPLTEFAFRLARGKIAINLDDGDNLVGVALTDGGRDVMLFASNGKAVRFDESEV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G+RL + ++V++L+V + + +LTA+E GYGKRT + EY K RGT+G
Sbjct: 711 RAMGRTATGVRGIRLAEGEEVVSLVVPDGEG-DILTASERGYGKRTPLSEYPKKGRGTQG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+T++RNG++V A ++ HE++LI+ GG L+RTR SEI ++GR+TQGV LI +
Sbjct: 770 VIAIQTSERNGRLVGAIQLSEQHEVLLISDGGTLVRTRASEISQVGRNTQGVTLIRLGEG 829
Query: 841 SKLCGVQRL 849
L V+R+
Sbjct: 830 ESLQAVERV 838
>gi|422806230|ref|ZP_16854662.1| hypothetical protein ERIG_02373 [Escherichia fergusonii B253]
gi|324112768|gb|EGC06744.1| hypothetical protein ERIG_02373 [Escherichia fergusonii B253]
Length = 878
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/886 (52%), Positives = 641/886 (72%), Gaps = 23/886 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLVAS 881
+ G+QR+ + PV TIDG A G +A V S
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEVES 868
>gi|415798400|ref|ZP_11498418.1| DNA gyrase, A subunit [Escherichia coli E128010]
gi|323161692|gb|EFZ47575.1| DNA gyrase, A subunit [Escherichia coli E128010]
Length = 875
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 641/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID+ I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDSIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|421683301|ref|ZP_16123096.1| DNA gyrase, A subunit [Shigella flexneri 1485-80]
gi|404338800|gb|EJZ65244.1| DNA gyrase, A subunit [Shigella flexneri 1485-80]
Length = 875
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELKLVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|423196580|ref|ZP_17183163.1| DNA gyrase subunit A [Aeromonas hydrophila SSU]
gi|404632034|gb|EKB28663.1| DNA gyrase subunit A [Aeromonas hydrophila SSU]
Length = 915
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/922 (50%), Positives = 641/922 (69%), Gaps = 50/922 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+E+ N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N + +I++L+ I PDFPT GII G S + Y TG+G +
Sbjct: 181 NIPPHNLTEIVNGCLALIENGDLTIDELMTYITGPDFPTGGIINGRSGIVQAYRTGRGSI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + +R II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E EIVLN LYK TQ+Q TFG+NM+AL N QPK++NLKEIL F+LHR+E
Sbjct: 301 MRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINMVALDNNQPKVMNLKEILDAFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL +AL NID I++IR ++TP +AK ++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAVALANIDPVIELIRHSATPADAKAGLVAKGWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ Y L++ QAQ IL + L +LT +E +KI+ +Y+
Sbjct: 421 AAMLEKAGDDAARPEWLEPEFGIREGHYY-LTEQQAQAILDLRLHKLTGLEHEKILEEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + +L IL++ R++E+I DEL ++ +YG RR+EI +++ + EDLI
Sbjct: 480 SLLDLIAELLFILASPVRLMEVIRDELLAVREQYGDE----RRTEISMSSAEINIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGGRGK A K+ED++ +L +ANTHD ILCFS
Sbjct: 536 PEDVVVTLSHQGYVKYQPLSDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILCFST 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+Q+P+ SR +RG+PIIN+ L E+IT ILP+ +++ + YVF +T+
Sbjct: 596 RGKVYWLKVYQLPEASRGARGRPIINLLPLDEGERITAILPV----KEYDADKYVFFATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS- 719
G VKKT LS+FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRF E S
Sbjct: 652 NGTVKKTSLSDFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFAEGSG 711
Query: 720 -------------------------------------VRAMGRSARGVIGMRLEKKQKVI 742
VR MGR+A GV G++L KV+
Sbjct: 712 RADADATDEVETDDDAGNDDDGSDNGEGTESKGTFKGVRPMGRTAAGVRGIKLGAGDKVV 771
Query: 743 ALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
+L+V ++LTATENGYGKRT + EY +RGT+G+ISIK ++RNGKV+ A V
Sbjct: 772 SLIVPRGDG-AILTATENGYGKRTALDEYPTKSRGTQGVISIKVDERNGKVIDAIQVEDT 830
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPVI 862
+IMLIT GG L+RTRV+E+ +GR+T GV LI + G+QR+ + ++ +
Sbjct: 831 DQIMLITNGGTLVRTRVAEVSVIGRNTGGVRLIRTGEDETVVGLQRVAESD--EEETEAL 888
Query: 863 TIDGPTASGKGTVAQLVASKLG 884
++G + G T A A G
Sbjct: 889 AVEGEVSEGTDTAADTGAVDAG 910
>gi|424815709|ref|ZP_18240860.1| DNA gyrase subunit A [Escherichia fergusonii ECD227]
gi|325496729|gb|EGC94588.1| DNA gyrase subunit A [Escherichia fergusonii ECD227]
Length = 878
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/886 (52%), Positives = 642/886 (72%), Gaps = 23/886 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLVAS 881
+ G+QR+ + PV +IDG A G +A V S
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDSIDGSAAEGDDEIAPEVES 868
>gi|430761099|ref|YP_007216956.1| DNA gyrase subunit A [Thioalkalivibrio nitratireducens DSM 14787]
gi|430010723|gb|AGA33475.1| DNA gyrase subunit A [Thioalkalivibrio nitratireducens DSM 14787]
Length = 870
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/854 (53%), Positives = 629/854 (73%), Gaps = 15/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKE+ + LE+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N +N
Sbjct: 1 MAEFAKEIFPVNLEDEMQQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNEYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YDA+VRMAQ FS+R L+DGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDAIVRMAQPFSVRYMLIDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I+ ELL D+DKET+DF+ NYDG E+EPSVLP++ P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMARIAQELLADIDKETVDFVDNYDGSEREPSVLPSKFPHLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
N+PPHNL EVID + ++ +PE ++ L++ +P PDFPTA II G+ + D Y TG+GRV
Sbjct: 181 NVPPHNLGEVIDACVALIDDPEIGVDGLMEHLPGPDFPTAAIINGVDGIRDAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+TH E R AII+ ELPYQVNK L+EKI++LVKE+++E IS LRDESDK G
Sbjct: 241 YIRARTHTEPLEGGQREAIIVSELPYQVNKARLIEKIAELVKERRIEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E+PE+VLN L+ TQ+QN FG+NM+ALV+GQP+LL+L++IL F+ HR+E
Sbjct: 301 MRIVIELRRGEVPEVVLNHLFMHTQMQNVFGINMVALVDGQPRLLDLRQILEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIF+LRKARE AHILEGL +AL NID I +I++ P EAK ++ W V
Sbjct: 361 VVTRRTIFDLRKARERAHILEGLAVALANIDEIIALIKAAPNPAEAKAGLLGRAWPPGMV 420
Query: 421 SKIIGFNKKNYNTISKINNISKL--QNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ ++ ++ S+ ++ D Y+LS+ QAQ IL + L RLT +EQ+KI+++
Sbjct: 421 TTML---ERAGAHASRPEELAAEFGPGEDGYRLSEAQAQAILDLRLHRLTGLEQEKILDE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y +++ + DL DIL + +R+ E I +EL ++ +YG +IRRSEI N + DL
Sbjct: 478 YRQLLELIDDLLDILGSGERLQEEIRNELLAVREQYG----DIRRSEIREAHANLTLADL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP++ YRAQ+RGGRGK A ++ED+I+++ +ANTHD ILCF
Sbjct: 534 IGEEDVVVTLSHAGYVKYQPLTAYRAQRRGGRGKAATSFREEDFIDRVLVANTHDTILCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YW+KV+++PQGSR +RGKPI+N+ L+ E+I ILP+ R + ++ +VFM
Sbjct: 594 SSRGRVYWIKVYELPQGSRAARGKPIVNLLPLEQDERINAILPV----RGYAEDRFVFMV 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L++FS PR +GIIAV+L + D L+ ALTDG ++ML + +GKAVRF E
Sbjct: 650 TAGGTVKKTPLTDFSRPRTAGIIAVDLRDGDRLVDVALTDGDQEVMLVTSAGKAVRFPET 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VRAMGR A GV G+R+++ +VIALL+ + S L A+E GYGKRT E+ H RG
Sbjct: 710 DVRAMGRVACGVRGIRMDETHRVIALLIVG--EGSALFASEFGYGKRTGFDEFPVHRRGG 767
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I+I+ RNG +V A V E+MLIT G L+RT V++I +GR+TQGV LI +
Sbjct: 768 QGVIAIQCAGRNGMLVGAARVLDDQEVMLITDAGTLVRTPVAQIPLIGRNTQGVRLIRLS 827
Query: 839 NKSKLCGVQRLCKI 852
KL + R+ ++
Sbjct: 828 EDEKLVELARVERL 841
>gi|157161714|ref|YP_001459032.1| DNA gyrase subunit A [Escherichia coli HS]
gi|432627883|ref|ZP_19863859.1| DNA gyrase subunit A [Escherichia coli KTE77]
gi|157067394|gb|ABV06649.1| DNA gyrase, A subunit [Escherichia coli HS]
gi|431162494|gb|ELE62935.1| DNA gyrase subunit A [Escherichia coli KTE77]
Length = 875
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/884 (52%), Positives = 639/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|387825133|ref|YP_005824604.1| DNA gyrase subunit A [Francisella cf. novicida 3523]
gi|332184599|gb|AEE26853.1| DNA gyrase subunit A [Francisella cf. novicida 3523]
Length = 862
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/848 (55%), Positives = 627/848 (73%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIITKESSSINIEKELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMQKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ N E +I DLI IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTIALIDNSELTIEDLIHYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E + I++ E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKAQIVVTEIPYQVNKAKLVEKIAELVKDKKVTGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIELIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q++ Y L++ QA+ IL + L RLT +EQ KI N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQSDSSYNLTEEQAEAILALRLHRLTGLEQDKITNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I+++ L ILS+ +I ++ +EL I++ YG R+SEII + ++ + EDLI
Sbjct: 480 KELIERIKYLIGILSDVNELIRVVKEELVEIRDNYGDE----RKSEIIESRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A ++MV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 AEENMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L+ E+IT ++P+S F + YVFM+T
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLEKDERITAMMPISQ----FNEGWYVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDG+ IM+FSD+GKA+RF+E+
Sbjct: 652 RLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMR+ QK++++LV+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRIHPDQKIVSMLVTNPDEGVVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV +I++IT G L+RT E+R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 104/205 (50%), Gaps = 14/205 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + + + I+ FS+ G+
Sbjct: 647 VFMATRLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + + +KI +L ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRIHPDQKIVSML-VTN-----PDEGVVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L + DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLV 746
GRSA+GV + L +K+I+L V
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKV 840
>gi|417828650|ref|ZP_12475202.1| DNA gyrase, A subunit [Shigella flexneri J1713]
gi|335574864|gb|EGM61180.1| DNA gyrase, A subunit [Shigella flexneri J1713]
Length = 875
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/879 (52%), Positives = 640/879 (72%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVQVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + + + TIDG A G +A V
Sbjct: 831 ENVVGLQRVAEPVDEED---LDTIDGSAAEGDDEIAPEV 866
>gi|432869593|ref|ZP_20090186.1| DNA gyrase subunit A [Escherichia coli KTE147]
gi|431410179|gb|ELG93341.1| DNA gyrase subunit A [Escherichia coli KTE147]
Length = 878
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/886 (52%), Positives = 640/886 (72%), Gaps = 23/886 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLVAS 881
+ G+QR+ + PV TIDG A G +A V S
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEVES 868
>gi|432500717|ref|ZP_19742474.1| DNA gyrase subunit A [Escherichia coli KTE216]
gi|432695092|ref|ZP_19930291.1| DNA gyrase subunit A [Escherichia coli KTE162]
gi|433106523|ref|ZP_20292498.1| DNA gyrase subunit A [Escherichia coli KTE148]
gi|431028294|gb|ELD41338.1| DNA gyrase subunit A [Escherichia coli KTE216]
gi|431233674|gb|ELF29261.1| DNA gyrase subunit A [Escherichia coli KTE162]
gi|431627230|gb|ELI95641.1| DNA gyrase subunit A [Escherichia coli KTE148]
Length = 875
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 641/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTTGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|386281300|ref|ZP_10058962.1| DNA gyrase subunit A [Escherichia sp. 4_1_40B]
gi|417833530|ref|ZP_12479978.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 01-09591]
gi|423000315|ref|ZP_16991069.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 09-7901]
gi|423003984|ref|ZP_16994730.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 04-8351]
gi|427805369|ref|ZP_18972436.1| DNA gyrase, subunit A, type II topoisomerase [Escherichia coli
chi7122]
gi|340734412|gb|EGR63542.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 01-09591]
gi|354869431|gb|EHF29841.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 04-8351]
gi|354873286|gb|EHF33663.1| DNA gyrase subunit A [Escherichia coli O104:H4 str. 09-7901]
gi|386121439|gb|EIG70054.1| DNA gyrase subunit A [Escherichia sp. 4_1_40B]
gi|412963551|emb|CCK47476.1| DNA gyrase, subunit A, type II topoisomerase [Escherichia coli
chi7122]
Length = 875
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 641/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|359435066|ref|ZP_09225296.1| DNA gyrase subunit A [Pseudoalteromonas sp. BSi20652]
gi|357918279|dbj|GAA61545.1| DNA gyrase subunit A [Pseudoalteromonas sp. BSi20652]
Length = 899
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/879 (53%), Positives = 634/879 (72%), Gaps = 38/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DL+KET+DF+ NYDG E P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEFIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++ NP+ +I +L+ IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLTEVVNGCLALIQNPDLTILELMDYIPGPDFPTAAIINGKKGIEQAYLTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRARADIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR ++ E++LN LY QTQLQ FGMNM+AL+N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGDVGEVILNNLYSQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH LEGL IAL NID I++IR + TP EAK + W L V
Sbjct: 361 VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKIALTARPWELGHV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ K N +++ + ++ + Y +S+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 QGML--EKAGENNVARPDWLAADLGIRDGQYYISEQQAQAILDLRLHKLTGLEHEKILTE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +++ + +L IL+ +R++E+I DEL IK +YG RR+EI A + S EDL
Sbjct: 479 YQALLELIAELLYILATPERLMEVIRDELVEIKAQYGDE----RRTEINAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 ITEENVVVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ +N Y+FM+
Sbjct: 595 STAGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPV----REYAENKYIFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE- 717
T+ G VKKT L+ +S R SGIIAVNL++ D LIG +TDGS +IMLF+D+GK VRF E
Sbjct: 651 TAFGTVKKTPLTAYSRQRASGIIAVNLNDGDSLIGVDITDGSNEIMLFTDAGKVVRFKEA 710
Query: 718 ------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR+A GV G+++ +Q+V++L+V +
Sbjct: 711 EETTVVDENGNPVLDEEGNPEIRFKGVRPMGRTATGVRGIKMPDEQRVVSLIVPKTDG-A 769
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LT TENGYGKRT +++Y +R T+G++SIK ++RNG VV A V+ EIM+I+ G
Sbjct: 770 ILTVTENGYGKRTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGT 829
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ +GR+TQGVILI ++ ++ G+QR+ +I
Sbjct: 830 LVRTRVNEVSTVGRNTQGVILIRTIDEEQVVGLQRIEEI 868
>gi|16130166|ref|NP_416734.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
str. K-12 substr. MG1655]
gi|24113610|ref|NP_708120.1| DNA gyrase subunit A [Shigella flexneri 2a str. 301]
gi|30063664|ref|NP_837835.1| DNA gyrase subunit A [Shigella flexneri 2a str. 2457T]
gi|82544525|ref|YP_408472.1| DNA gyrase subunit A [Shigella boydii Sb227]
gi|110642439|ref|YP_670169.1| DNA gyrase subunit A [Escherichia coli 536]
gi|157154912|ref|YP_001463578.1| DNA gyrase subunit A [Escherichia coli E24377A]
gi|170081849|ref|YP_001731169.1| DNA gyrase subunit A [Escherichia coli str. K-12 substr. DH10B]
gi|187732271|ref|YP_001881059.1| DNA gyrase subunit A [Shigella boydii CDC 3083-94]
gi|191166476|ref|ZP_03028306.1| DNA gyrase, A subunit [Escherichia coli B7A]
gi|191169998|ref|ZP_03031552.1| DNA gyrase, A subunit [Escherichia coli F11]
gi|193062390|ref|ZP_03043485.1| DNA gyrase, A subunit [Escherichia coli E22]
gi|193068181|ref|ZP_03049145.1| DNA gyrase, A subunit [Escherichia coli E110019]
gi|209919683|ref|YP_002293767.1| DNA gyrase subunit A [Escherichia coli SE11]
gi|218554794|ref|YP_002387707.1| DNA gyrase subunit A [Escherichia coli IAI1]
gi|218695837|ref|YP_002403504.1| DNA gyrase subunit A [Escherichia coli 55989]
gi|238901404|ref|YP_002927200.1| DNA gyrase subunit A [Escherichia coli BW2952]
gi|260844827|ref|YP_003222605.1| DNA gyrase subunit A [Escherichia coli O103:H2 str. 12009]
gi|260856281|ref|YP_003230172.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. 11368]
gi|260868961|ref|YP_003235363.1| DNA gyrase subunit A [Escherichia coli O111:H- str. 11128]
gi|293446574|ref|ZP_06662996.1| A subunit [Escherichia coli B088]
gi|300822680|ref|ZP_07102818.1| DNA gyrase, A subunit [Escherichia coli MS 119-7]
gi|300918607|ref|ZP_07135195.1| DNA gyrase, A subunit [Escherichia coli MS 115-1]
gi|300981257|ref|ZP_07175434.1| DNA gyrase, A subunit [Escherichia coli MS 200-1]
gi|301024225|ref|ZP_07187922.1| DNA gyrase, A subunit [Escherichia coli MS 196-1]
gi|301328721|ref|ZP_07221774.1| DNA gyrase, A subunit [Escherichia coli MS 78-1]
gi|301647679|ref|ZP_07247473.1| DNA gyrase, A subunit [Escherichia coli MS 146-1]
gi|307311202|ref|ZP_07590846.1| DNA gyrase, A subunit [Escherichia coli W]
gi|312973514|ref|ZP_07787686.1| DNA gyrase, A subunit [Escherichia coli 1827-70]
gi|331642860|ref|ZP_08343995.1| DNA gyrase, A subunit [Escherichia coli H736]
gi|331663736|ref|ZP_08364646.1| DNA gyrase, A subunit [Escherichia coli TA143]
gi|332278618|ref|ZP_08391031.1| DNA gyrase subunit A [Shigella sp. D9]
gi|378712327|ref|YP_005277220.1| DNA gyrase subunit A [Escherichia coli KO11FL]
gi|386609614|ref|YP_006125100.1| DNA gyrase subunit A [Escherichia coli W]
gi|386700789|ref|YP_006164626.1| DNA gyrase subunit A [Escherichia coli KO11FL]
gi|386705490|ref|YP_006169337.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Escherichia coli P12b]
gi|386710099|ref|YP_006173820.1| DNA gyrase subunit A [Escherichia coli W]
gi|388478278|ref|YP_490470.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
str. K-12 substr. W3110]
gi|415778289|ref|ZP_11489335.1| DNA gyrase, A subunit [Escherichia coli 3431]
gi|415784045|ref|ZP_11492044.1| DNA gyrase, A subunit [Escherichia coli EPECa14]
gi|415813368|ref|ZP_11505177.1| DNA gyrase, A subunit [Escherichia coli LT-68]
gi|415822887|ref|ZP_11511406.1| DNA gyrase, A subunit [Escherichia coli OK1180]
gi|415829078|ref|ZP_11515461.1| DNA gyrase, A subunit [Escherichia coli OK1357]
gi|415853369|ref|ZP_11529378.1| DNA gyrase, A subunit [Shigella flexneri 2a str. 2457T]
gi|416259976|ref|ZP_11640159.1| DNA gyrase subunit A [Shigella dysenteriae CDC 74-1112]
gi|416343793|ref|ZP_11677693.1| DNA gyrase subunit A [Escherichia coli EC4100B]
gi|416898295|ref|ZP_11927859.1| DNA gyrase, A subunit [Escherichia coli STEC_7v]
gi|417116016|ref|ZP_11967152.1| DNA gyrase, A subunit [Escherichia coli 1.2741]
gi|417122174|ref|ZP_11971432.1| DNA gyrase, A subunit [Escherichia coli 97.0246]
gi|417135134|ref|ZP_11979919.1| DNA gyrase, A subunit [Escherichia coli 5.0588]
gi|417145949|ref|ZP_11986907.1| DNA gyrase, A subunit [Escherichia coli 1.2264]
gi|417155270|ref|ZP_11993399.1| DNA gyrase, A subunit [Escherichia coli 96.0497]
gi|417163686|ref|ZP_11998874.1| DNA gyrase, A subunit [Escherichia coli 99.0741]
gi|417175533|ref|ZP_12005329.1| DNA gyrase, A subunit [Escherichia coli 3.2608]
gi|417182869|ref|ZP_12009426.1| DNA gyrase, A subunit [Escherichia coli 93.0624]
gi|417191987|ref|ZP_12014087.1| DNA gyrase, A subunit [Escherichia coli 4.0522]
gi|417208739|ref|ZP_12020470.1| DNA gyrase, A subunit [Escherichia coli JB1-95]
gi|417223082|ref|ZP_12026522.1| DNA gyrase, A subunit [Escherichia coli 96.154]
gi|417231959|ref|ZP_12033357.1| DNA gyrase, A subunit [Escherichia coli 5.0959]
gi|417238106|ref|ZP_12035837.1| DNA gyrase, A subunit [Escherichia coli 9.0111]
gi|417254083|ref|ZP_12045839.1| DNA gyrase, A subunit [Escherichia coli 4.0967]
gi|417259938|ref|ZP_12047461.1| DNA gyrase, A subunit [Escherichia coli 2.3916]
gi|417269944|ref|ZP_12057304.1| DNA gyrase, A subunit [Escherichia coli 3.3884]
gi|417272892|ref|ZP_12060241.1| DNA gyrase, A subunit [Escherichia coli 2.4168]
gi|417277604|ref|ZP_12064927.1| DNA gyrase, A subunit [Escherichia coli 3.2303]
gi|417292115|ref|ZP_12079396.1| DNA gyrase, A subunit [Escherichia coli B41]
gi|417299674|ref|ZP_12086901.1| DNA gyrase, A subunit [Escherichia coli 900105 (10e)]
gi|417581751|ref|ZP_12232553.1| DNA gyrase, A subunit [Escherichia coli STEC_B2F1]
gi|417592525|ref|ZP_12243222.1| DNA gyrase, A subunit [Escherichia coli 2534-86]
gi|417597547|ref|ZP_12248188.1| DNA gyrase, A subunit [Escherichia coli 3030-1]
gi|417602839|ref|ZP_12253409.1| DNA gyrase, A subunit [Escherichia coli STEC_94C]
gi|417608874|ref|ZP_12259377.1| DNA gyrase, A subunit [Escherichia coli STEC_DG131-3]
gi|417613701|ref|ZP_12264159.1| DNA gyrase, A subunit [Escherichia coli STEC_EH250]
gi|417618827|ref|ZP_12269241.1| DNA gyrase, A subunit [Escherichia coli G58-1]
gi|417624124|ref|ZP_12274423.1| DNA gyrase, A subunit [Escherichia coli STEC_H.1.8]
gi|417635164|ref|ZP_12285377.1| DNA gyrase, A subunit [Escherichia coli STEC_S1191]
gi|417639985|ref|ZP_12290126.1| DNA gyrase, A subunit [Escherichia coli TX1999]
gi|417667647|ref|ZP_12317192.1| DNA gyrase, A subunit [Escherichia coli STEC_O31]
gi|417682613|ref|ZP_12331968.1| DNA gyrase, A subunit [Shigella boydii 3594-74]
gi|417708273|ref|ZP_12357306.1| DNA gyrase, A subunit [Shigella flexneri VA-6]
gi|417713281|ref|ZP_12362247.1| DNA gyrase, A subunit [Shigella flexneri K-272]
gi|417718121|ref|ZP_12367021.1| DNA gyrase, A subunit [Shigella flexneri K-227]
gi|417723786|ref|ZP_12372591.1| DNA gyrase, A subunit [Shigella flexneri K-304]
gi|417734086|ref|ZP_12382737.1| DNA gyrase, A subunit [Shigella flexneri 2747-71]
gi|417739065|ref|ZP_12387645.1| DNA gyrase, A subunit [Shigella flexneri 4343-70]
gi|417744108|ref|ZP_12392634.1| DNA gyrase, A subunit [Shigella flexneri 2930-71]
gi|417947051|ref|ZP_12590254.1| DNA gyrase subunit A [Escherichia coli XH140A]
gi|417975458|ref|ZP_12616257.1| DNA gyrase subunit A [Escherichia coli XH001]
gi|418041859|ref|ZP_12680073.1| DNA gyrase, A subunit [Escherichia coli W26]
gi|418257200|ref|ZP_12880884.1| DNA gyrase, A subunit [Shigella flexneri 6603-63]
gi|418303624|ref|ZP_12915418.1| DNA gyrase, A subunit [Escherichia coli UMNF18]
gi|418957398|ref|ZP_13509322.1| DNA gyrase, A subunit [Escherichia coli J53]
gi|419143171|ref|ZP_13687909.1| DNA gyrase, A subunit [Escherichia coli DEC6A]
gi|419149485|ref|ZP_13694138.1| DNA gyrase, A subunit [Escherichia coli DEC6B]
gi|419159908|ref|ZP_13704413.1| DNA gyrase, A subunit [Escherichia coli DEC6D]
gi|419165035|ref|ZP_13709492.1| DNA gyrase, A subunit [Escherichia coli DEC6E]
gi|419170906|ref|ZP_13714792.1| DNA gyrase, A subunit [Escherichia coli DEC7A]
gi|419175767|ref|ZP_13719605.1| DNA gyrase, A subunit [Escherichia coli DEC7B]
gi|419181551|ref|ZP_13725164.1| DNA gyrase, A subunit [Escherichia coli DEC7C]
gi|419186991|ref|ZP_13730505.1| DNA gyrase, A subunit [Escherichia coli DEC7D]
gi|419192283|ref|ZP_13735736.1| DNA gyrase, A subunit [Escherichia coli DEC7E]
gi|419197740|ref|ZP_13741126.1| DNA gyrase, A subunit [Escherichia coli DEC8A]
gi|419204193|ref|ZP_13747375.1| DNA gyrase, A subunit [Escherichia coli DEC8B]
gi|419210442|ref|ZP_13753519.1| DNA gyrase, A subunit [Escherichia coli DEC8C]
gi|419216313|ref|ZP_13759313.1| DNA gyrase, A subunit [Escherichia coli DEC8D]
gi|419222240|ref|ZP_13765162.1| DNA gyrase, A subunit [Escherichia coli DEC8E]
gi|419227486|ref|ZP_13770342.1| DNA gyrase, A subunit [Escherichia coli DEC9A]
gi|419233280|ref|ZP_13776056.1| DNA gyrase, A subunit [Escherichia coli DEC9B]
gi|419238537|ref|ZP_13781252.1| DNA gyrase, A subunit [Escherichia coli DEC9C]
gi|419244005|ref|ZP_13786643.1| DNA gyrase, A subunit [Escherichia coli DEC9D]
gi|419249828|ref|ZP_13792411.1| DNA gyrase, A subunit [Escherichia coli DEC9E]
gi|419255695|ref|ZP_13798211.1| DNA gyrase, A subunit [Escherichia coli DEC10A]
gi|419261918|ref|ZP_13804335.1| DNA gyrase, A subunit [Escherichia coli DEC10B]
gi|419268063|ref|ZP_13810415.1| DNA gyrase, A subunit [Escherichia coli DEC10C]
gi|419273407|ref|ZP_13815702.1| DNA gyrase, A subunit [Escherichia coli DEC10D]
gi|419278734|ref|ZP_13820981.1| DNA gyrase, A subunit [Escherichia coli DEC10E]
gi|419284920|ref|ZP_13827093.1| DNA gyrase, A subunit [Escherichia coli DEC10F]
gi|419290173|ref|ZP_13832265.1| DNA gyrase, A subunit [Escherichia coli DEC11A]
gi|419295500|ref|ZP_13837546.1| DNA gyrase, A subunit [Escherichia coli DEC11B]
gi|419307092|ref|ZP_13848992.1| DNA gyrase, A subunit [Escherichia coli DEC11D]
gi|419312098|ref|ZP_13853960.1| DNA gyrase, A subunit [Escherichia coli DEC11E]
gi|419317510|ref|ZP_13859313.1| DNA gyrase, A subunit [Escherichia coli DEC12A]
gi|419323686|ref|ZP_13865379.1| DNA gyrase, A subunit [Escherichia coli DEC12B]
gi|419329650|ref|ZP_13871254.1| DNA gyrase, A subunit [Escherichia coli DEC12C]
gi|419335213|ref|ZP_13876746.1| DNA gyrase, A subunit [Escherichia coli DEC12D]
gi|419340680|ref|ZP_13882144.1| DNA gyrase, A subunit [Escherichia coli DEC12E]
gi|419345901|ref|ZP_13887275.1| DNA gyrase, A subunit [Escherichia coli DEC13A]
gi|419350315|ref|ZP_13891653.1| DNA gyrase, A subunit [Escherichia coli DEC13B]
gi|419355783|ref|ZP_13897040.1| DNA gyrase, A subunit [Escherichia coli DEC13C]
gi|419360878|ref|ZP_13902095.1| DNA gyrase, A subunit [Escherichia coli DEC13D]
gi|419365962|ref|ZP_13907123.1| DNA gyrase, A subunit [Escherichia coli DEC13E]
gi|419370733|ref|ZP_13911852.1| DNA gyrase, A subunit [Escherichia coli DEC14A]
gi|419376167|ref|ZP_13917191.1| DNA gyrase, A subunit [Escherichia coli DEC14B]
gi|419381501|ref|ZP_13922452.1| DNA gyrase, A subunit [Escherichia coli DEC14C]
gi|419386808|ref|ZP_13927686.1| DNA gyrase, A subunit [Escherichia coli DEC14D]
gi|419809961|ref|ZP_14334844.1| DNA gyrase subunit A [Escherichia coli O32:H37 str. P4]
gi|419862562|ref|ZP_14385156.1| DNA gyrase subunit A [Escherichia coli O103:H25 str. CVM9340]
gi|419870597|ref|ZP_14392690.1| DNA gyrase subunit A [Escherichia coli O103:H2 str. CVM9450]
gi|419879391|ref|ZP_14400827.1| DNA gyrase subunit A [Escherichia coli O111:H11 str. CVM9534]
gi|419880894|ref|ZP_14402259.1| DNA gyrase subunit A [Escherichia coli O111:H11 str. CVM9545]
gi|419889679|ref|ZP_14410042.1| DNA gyrase subunit A [Escherichia coli O111:H8 str. CVM9570]
gi|419894815|ref|ZP_14414699.1| DNA gyrase subunit A [Escherichia coli O111:H8 str. CVM9574]
gi|419904767|ref|ZP_14423753.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM9942]
gi|419911303|ref|ZP_14429796.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM10026]
gi|419922098|ref|ZP_14440121.1| DNA gyrase subunit A [Escherichia coli 541-15]
gi|419950533|ref|ZP_14466745.1| DNA gyrase subunit A [Escherichia coli CUMT8]
gi|420093675|ref|ZP_14605321.1| DNA gyrase subunit A [Escherichia coli O111:H8 str. CVM9634]
gi|420102125|ref|ZP_14613150.1| DNA gyrase subunit A [Escherichia coli O111:H11 str. CVM9455]
gi|420108465|ref|ZP_14618720.1| DNA gyrase subunit A [Escherichia coli O111:H11 str. CVM9553]
gi|420116784|ref|ZP_14626161.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM10021]
gi|420120187|ref|ZP_14629408.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM10030]
gi|420125096|ref|ZP_14633931.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM10224]
gi|420133639|ref|ZP_14641842.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM9952]
gi|420321127|ref|ZP_14822956.1| DNA gyrase, A subunit [Shigella flexneri 2850-71]
gi|420326379|ref|ZP_14828130.1| DNA gyrase, A subunit [Shigella flexneri CCH060]
gi|420332065|ref|ZP_14833721.1| DNA gyrase, A subunit [Shigella flexneri K-1770]
gi|420340910|ref|ZP_14842419.1| DNA gyrase, A subunit [Shigella flexneri K-404]
gi|420354596|ref|ZP_14855677.1| DNA gyrase, A subunit [Shigella boydii 4444-74]
gi|420386296|ref|ZP_14885646.1| DNA gyrase, A subunit [Escherichia coli EPECa12]
gi|420391959|ref|ZP_14891212.1| DNA gyrase, A subunit [Escherichia coli EPEC C342-62]
gi|422375571|ref|ZP_16455836.1| DNA gyrase, A subunit [Escherichia coli MS 60-1]
gi|422762260|ref|ZP_16816017.1| hypothetical protein ERBG_02182 [Escherichia coli E1167]
gi|422766840|ref|ZP_16820567.1| hypothetical protein ERCG_02100 [Escherichia coli E1520]
gi|422771923|ref|ZP_16825612.1| hypothetical protein ERDG_02479 [Escherichia coli E482]
gi|422777517|ref|ZP_16831169.1| hypothetical protein EREG_03495 [Escherichia coli H120]
gi|422799537|ref|ZP_16848036.1| hypothetical protein ERJG_00701 [Escherichia coli M863]
gi|422819593|ref|ZP_16867804.1| DNA gyrase subunit A [Escherichia coli M919]
gi|423704387|ref|ZP_17678812.1| DNA gyrase subunit A [Escherichia coli H730]
gi|423706270|ref|ZP_17680653.1| DNA gyrase subunit A [Escherichia coli B799]
gi|424753105|ref|ZP_18181070.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CFSAN001629]
gi|424761985|ref|ZP_18189514.1| DNA gyrase subunit A [Escherichia coli O111:H11 str. CFSAN001630]
gi|424774433|ref|ZP_18201448.1| DNA gyrase subunit A [Escherichia coli O111:H8 str. CFSAN001632]
gi|424838602|ref|ZP_18263239.1| DNA gyrase subunit A [Shigella flexneri 5a str. M90T]
gi|425115644|ref|ZP_18517445.1| DNA gyrase, A subunit [Escherichia coli 8.0566]
gi|425120369|ref|ZP_18522068.1| DNA gyrase, A subunit [Escherichia coli 8.0569]
gi|425273395|ref|ZP_18664807.1| DNA gyrase, A subunit [Escherichia coli TW15901]
gi|425283939|ref|ZP_18674978.1| DNA gyrase, A subunit [Escherichia coli TW00353]
gi|425289242|ref|ZP_18680090.1| DNA gyrase, A subunit [Escherichia coli 3006]
gi|425380291|ref|ZP_18764329.1| DNA gyrase, A subunit [Escherichia coli EC1865]
gi|425423049|ref|ZP_18804217.1| DNA gyrase, A subunit [Escherichia coli 0.1288]
gi|432370471|ref|ZP_19613557.1| DNA gyrase subunit A [Escherichia coli KTE10]
gi|432377397|ref|ZP_19620388.1| DNA gyrase subunit A [Escherichia coli KTE12]
gi|432417704|ref|ZP_19660308.1| DNA gyrase subunit A [Escherichia coli KTE44]
gi|432471598|ref|ZP_19713644.1| DNA gyrase subunit A [Escherichia coli KTE206]
gi|432481602|ref|ZP_19723559.1| DNA gyrase subunit A [Escherichia coli KTE210]
gi|432486037|ref|ZP_19727952.1| DNA gyrase subunit A [Escherichia coli KTE212]
gi|432489906|ref|ZP_19731780.1| DNA gyrase subunit A [Escherichia coli KTE213]
gi|432534505|ref|ZP_19771480.1| DNA gyrase subunit A [Escherichia coli KTE234]
gi|432564484|ref|ZP_19801066.1| DNA gyrase subunit A [Escherichia coli KTE51]
gi|432576509|ref|ZP_19812969.1| DNA gyrase subunit A [Escherichia coli KTE56]
gi|432637478|ref|ZP_19873348.1| DNA gyrase subunit A [Escherichia coli KTE81]
gi|432661468|ref|ZP_19897112.1| DNA gyrase subunit A [Escherichia coli KTE111]
gi|432671303|ref|ZP_19906832.1| DNA gyrase subunit A [Escherichia coli KTE119]
gi|432675342|ref|ZP_19910801.1| DNA gyrase subunit A [Escherichia coli KTE142]
gi|432686064|ref|ZP_19921361.1| DNA gyrase subunit A [Escherichia coli KTE156]
gi|432692204|ref|ZP_19927432.1| DNA gyrase subunit A [Escherichia coli KTE161]
gi|432705024|ref|ZP_19940125.1| DNA gyrase subunit A [Escherichia coli KTE171]
gi|432714010|ref|ZP_19949050.1| DNA gyrase subunit A [Escherichia coli KTE8]
gi|432737745|ref|ZP_19972503.1| DNA gyrase subunit A [Escherichia coli KTE42]
gi|432750709|ref|ZP_19985313.1| DNA gyrase subunit A [Escherichia coli KTE29]
gi|432765621|ref|ZP_20000059.1| DNA gyrase subunit A [Escherichia coli KTE48]
gi|432806385|ref|ZP_20040313.1| DNA gyrase subunit A [Escherichia coli KTE91]
gi|432832254|ref|ZP_20065828.1| DNA gyrase subunit A [Escherichia coli KTE135]
gi|432835213|ref|ZP_20068752.1| DNA gyrase subunit A [Escherichia coli KTE136]
gi|432839914|ref|ZP_20073400.1| DNA gyrase subunit A [Escherichia coli KTE140]
gi|432862824|ref|ZP_20087113.1| DNA gyrase subunit A [Escherichia coli KTE146]
gi|432935019|ref|ZP_20134456.1| DNA gyrase subunit A [Escherichia coli KTE184]
gi|432948104|ref|ZP_20143260.1| DNA gyrase subunit A [Escherichia coli KTE196]
gi|432955750|ref|ZP_20147628.1| DNA gyrase subunit A [Escherichia coli KTE197]
gi|432968333|ref|ZP_20157248.1| DNA gyrase subunit A [Escherichia coli KTE203]
gi|433043808|ref|ZP_20231303.1| DNA gyrase subunit A [Escherichia coli KTE117]
gi|433048609|ref|ZP_20235962.1| DNA gyrase subunit A [Escherichia coli KTE120]
gi|433078408|ref|ZP_20264946.1| DNA gyrase subunit A [Escherichia coli KTE131]
gi|433092615|ref|ZP_20278882.1| DNA gyrase subunit A [Escherichia coli KTE138]
gi|433130802|ref|ZP_20316237.1| DNA gyrase subunit A [Escherichia coli KTE163]
gi|433135464|ref|ZP_20320808.1| DNA gyrase subunit A [Escherichia coli KTE166]
gi|433174152|ref|ZP_20358677.1| DNA gyrase subunit A [Escherichia coli KTE232]
gi|433194306|ref|ZP_20378296.1| DNA gyrase subunit A [Escherichia coli KTE90]
gi|433203847|ref|ZP_20387623.1| DNA gyrase subunit A [Escherichia coli KTE95]
gi|443618310|ref|YP_007382166.1| DNA gyrase subunit A [Escherichia coli APEC O78]
gi|450245870|ref|ZP_21900727.1| DNA gyrase subunit A [Escherichia coli S17]
gi|84028817|sp|P0AES4.1|GYRA_ECOLI RecName: Full=DNA gyrase subunit A
gi|84028818|sp|P0AES5.1|GYRA_SHIFL RecName: Full=DNA gyrase subunit A
gi|41634|emb|CAA29919.1| unnamed protein product [Escherichia coli]
gi|41636|emb|CAA29676.1| unnamed protein product [Escherichia coli]
gi|1788562|gb|AAC75291.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
str. K-12 substr. MG1655]
gi|1799575|dbj|BAA16048.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
str. K12 substr. W3110]
gi|24052667|gb|AAN43827.1| DNA gyrase, subunit A, type II topoisomerase [Shigella flexneri 2a
str. 301]
gi|30041919|gb|AAP17645.1| DNA gyrase, subunit A, type II topoisomerase [Shigella flexneri 2a
str. 2457T]
gi|81245936|gb|ABB66644.1| DNA gyrase, subunit A [Shigella boydii Sb227]
gi|110344031|gb|ABG70268.1| DNA gyrase subunit A [Escherichia coli 536]
gi|157076942|gb|ABV16650.1| DNA gyrase, A subunit [Escherichia coli E24377A]
gi|169889684|gb|ACB03391.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
str. K-12 substr. DH10B]
gi|187429263|gb|ACD08537.1| DNA gyrase, A subunit [Shigella boydii CDC 3083-94]
gi|190903436|gb|EDV63155.1| DNA gyrase, A subunit [Escherichia coli B7A]
gi|190909514|gb|EDV69099.1| DNA gyrase, A subunit [Escherichia coli F11]
gi|192932056|gb|EDV84655.1| DNA gyrase, A subunit [Escherichia coli E22]
gi|192958460|gb|EDV88899.1| DNA gyrase, A subunit [Escherichia coli E110019]
gi|209912942|dbj|BAG78016.1| DNA gyrase subunit A [Escherichia coli SE11]
gi|218352569|emb|CAU98348.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
55989]
gi|218361562|emb|CAQ99153.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
IAI1]
gi|238860817|gb|ACR62815.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
BW2952]
gi|257754930|dbj|BAI26432.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. 11368]
gi|257759974|dbj|BAI31471.1| DNA gyrase subunit A [Escherichia coli O103:H2 str. 12009]
gi|257765317|dbj|BAI36812.1| DNA gyrase subunit A [Escherichia coli O111:H- str. 11128]
gi|291323404|gb|EFE62832.1| A subunit [Escherichia coli B088]
gi|299880518|gb|EFI88729.1| DNA gyrase, A subunit [Escherichia coli MS 196-1]
gi|300307621|gb|EFJ62141.1| DNA gyrase, A subunit [Escherichia coli MS 200-1]
gi|300414259|gb|EFJ97569.1| DNA gyrase, A subunit [Escherichia coli MS 115-1]
gi|300524880|gb|EFK45949.1| DNA gyrase, A subunit [Escherichia coli MS 119-7]
gi|300844869|gb|EFK72629.1| DNA gyrase, A subunit [Escherichia coli MS 78-1]
gi|301074209|gb|EFK89015.1| DNA gyrase, A subunit [Escherichia coli MS 146-1]
gi|306908708|gb|EFN39205.1| DNA gyrase, A subunit [Escherichia coli W]
gi|310332109|gb|EFP99344.1| DNA gyrase, A subunit [Escherichia coli 1827-70]
gi|313651346|gb|EFS15744.1| DNA gyrase, A subunit [Shigella flexneri 2a str. 2457T]
gi|315061531|gb|ADT75858.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli W]
gi|315615492|gb|EFU96124.1| DNA gyrase, A subunit [Escherichia coli 3431]
gi|320177201|gb|EFW52210.1| DNA gyrase subunit A [Shigella dysenteriae CDC 74-1112]
gi|320199825|gb|EFW74414.1| DNA gyrase subunit A [Escherichia coli EC4100B]
gi|323156508|gb|EFZ42662.1| DNA gyrase, A subunit [Escherichia coli EPECa14]
gi|323171909|gb|EFZ57553.1| DNA gyrase, A subunit [Escherichia coli LT-68]
gi|323176842|gb|EFZ62432.1| DNA gyrase, A subunit [Escherichia coli OK1180]
gi|323184151|gb|EFZ69528.1| DNA gyrase, A subunit [Escherichia coli OK1357]
gi|323377888|gb|ADX50156.1| DNA gyrase, A subunit [Escherichia coli KO11FL]
gi|323936845|gb|EGB33130.1| hypothetical protein ERCG_02100 [Escherichia coli E1520]
gi|323941075|gb|EGB37262.1| hypothetical protein ERDG_02479 [Escherichia coli E482]
gi|323945040|gb|EGB41105.1| hypothetical protein EREG_03495 [Escherichia coli H120]
gi|323967672|gb|EGB63084.1| hypothetical protein ERJG_00701 [Escherichia coli M863]
gi|324013124|gb|EGB82343.1| DNA gyrase, A subunit [Escherichia coli MS 60-1]
gi|324117886|gb|EGC11785.1| hypothetical protein ERBG_02182 [Escherichia coli E1167]
gi|327252499|gb|EGE64158.1| DNA gyrase, A subunit [Escherichia coli STEC_7v]
gi|331039658|gb|EGI11878.1| DNA gyrase, A subunit [Escherichia coli H736]
gi|331059535|gb|EGI31512.1| DNA gyrase, A subunit [Escherichia coli TA143]
gi|332094134|gb|EGI99186.1| DNA gyrase, A subunit [Shigella boydii 3594-74]
gi|332100970|gb|EGJ04316.1| DNA gyrase subunit A [Shigella sp. D9]
gi|332754876|gb|EGJ85241.1| DNA gyrase, A subunit [Shigella flexneri 4343-70]
gi|332756160|gb|EGJ86511.1| DNA gyrase, A subunit [Shigella flexneri 2747-71]
gi|332766049|gb|EGJ96259.1| DNA gyrase, A subunit [Shigella flexneri 2930-71]
gi|333001373|gb|EGK20941.1| DNA gyrase, A subunit [Shigella flexneri VA-6]
gi|333002596|gb|EGK22156.1| DNA gyrase, A subunit [Shigella flexneri K-272]
gi|333016644|gb|EGK35973.1| DNA gyrase, A subunit [Shigella flexneri K-304]
gi|333016790|gb|EGK36117.1| DNA gyrase, A subunit [Shigella flexneri K-227]
gi|339415722|gb|AEJ57394.1| DNA gyrase, A subunit [Escherichia coli UMNF18]
gi|342361237|gb|EGU25381.1| DNA gyrase subunit A [Escherichia coli XH140A]
gi|344195023|gb|EGV49094.1| DNA gyrase subunit A [Escherichia coli XH001]
gi|345337522|gb|EGW69954.1| DNA gyrase, A subunit [Escherichia coli STEC_B2F1]
gi|345338862|gb|EGW71289.1| DNA gyrase, A subunit [Escherichia coli 2534-86]
gi|345350505|gb|EGW82780.1| DNA gyrase, A subunit [Escherichia coli STEC_94C]
gi|345353535|gb|EGW85767.1| DNA gyrase, A subunit [Escherichia coli 3030-1]
gi|345358083|gb|EGW90271.1| DNA gyrase, A subunit [Escherichia coli STEC_DG131-3]
gi|345361895|gb|EGW94052.1| DNA gyrase, A subunit [Escherichia coli STEC_EH250]
gi|345375541|gb|EGX07488.1| DNA gyrase, A subunit [Escherichia coli G58-1]
gi|345377085|gb|EGX09017.1| DNA gyrase, A subunit [Escherichia coli STEC_H.1.8]
gi|345387447|gb|EGX17269.1| DNA gyrase, A subunit [Escherichia coli STEC_S1191]
gi|345392987|gb|EGX22765.1| DNA gyrase, A subunit [Escherichia coli TX1999]
gi|359332573|dbj|BAL39020.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
str. K-12 substr. MDS42]
gi|377992607|gb|EHV55754.1| DNA gyrase, A subunit [Escherichia coli DEC6B]
gi|377993684|gb|EHV56815.1| DNA gyrase, A subunit [Escherichia coli DEC6A]
gi|378007252|gb|EHV70221.1| DNA gyrase, A subunit [Escherichia coli DEC6D]
gi|378011117|gb|EHV74062.1| DNA gyrase, A subunit [Escherichia coli DEC6E]
gi|378014950|gb|EHV77847.1| DNA gyrase, A subunit [Escherichia coli DEC7A]
gi|378023184|gb|EHV85861.1| DNA gyrase, A subunit [Escherichia coli DEC7C]
gi|378028983|gb|EHV91599.1| DNA gyrase, A subunit [Escherichia coli DEC7D]
gi|378033170|gb|EHV95750.1| DNA gyrase, A subunit [Escherichia coli DEC7B]
gi|378038347|gb|EHW00862.1| DNA gyrase, A subunit [Escherichia coli DEC7E]
gi|378046297|gb|EHW08676.1| DNA gyrase, A subunit [Escherichia coli DEC8A]
gi|378048018|gb|EHW10374.1| DNA gyrase, A subunit [Escherichia coli DEC8B]
gi|378053138|gb|EHW15438.1| DNA gyrase, A subunit [Escherichia coli DEC8C]
gi|378061327|gb|EHW23512.1| DNA gyrase, A subunit [Escherichia coli DEC8D]
gi|378065329|gb|EHW27477.1| DNA gyrase, A subunit [Escherichia coli DEC8E]
gi|378074161|gb|EHW36200.1| DNA gyrase, A subunit [Escherichia coli DEC9A]
gi|378077022|gb|EHW39020.1| DNA gyrase, A subunit [Escherichia coli DEC9B]
gi|378083576|gb|EHW45507.1| DNA gyrase, A subunit [Escherichia coli DEC9C]
gi|378089941|gb|EHW51781.1| DNA gyrase, A subunit [Escherichia coli DEC9D]
gi|378094850|gb|EHW56641.1| DNA gyrase, A subunit [Escherichia coli DEC9E]
gi|378099634|gb|EHW61337.1| DNA gyrase, A subunit [Escherichia coli DEC10A]
gi|378105608|gb|EHW67247.1| DNA gyrase, A subunit [Escherichia coli DEC10B]
gi|378110714|gb|EHW72308.1| DNA gyrase, A subunit [Escherichia coli DEC10C]
gi|378115894|gb|EHW77427.1| DNA gyrase, A subunit [Escherichia coli DEC10D]
gi|378128159|gb|EHW89544.1| DNA gyrase, A subunit [Escherichia coli DEC10E]
gi|378129974|gb|EHW91344.1| DNA gyrase, A subunit [Escherichia coli DEC11A]
gi|378131260|gb|EHW92618.1| DNA gyrase, A subunit [Escherichia coli DEC10F]
gi|378142587|gb|EHX03789.1| DNA gyrase, A subunit [Escherichia coli DEC11B]
gi|378149079|gb|EHX10212.1| DNA gyrase, A subunit [Escherichia coli DEC11D]
gi|378157726|gb|EHX18757.1| DNA gyrase, A subunit [Escherichia coli DEC11E]
gi|378164762|gb|EHX25703.1| DNA gyrase, A subunit [Escherichia coli DEC12B]
gi|378169093|gb|EHX29993.1| DNA gyrase, A subunit [Escherichia coli DEC12A]
gi|378169966|gb|EHX30852.1| DNA gyrase, A subunit [Escherichia coli DEC12C]
gi|378182292|gb|EHX42945.1| DNA gyrase, A subunit [Escherichia coli DEC12D]
gi|378185349|gb|EHX45974.1| DNA gyrase, A subunit [Escherichia coli DEC13A]
gi|378187591|gb|EHX48202.1| DNA gyrase, A subunit [Escherichia coli DEC12E]
gi|378200045|gb|EHX60501.1| DNA gyrase, A subunit [Escherichia coli DEC13C]
gi|378200493|gb|EHX60948.1| DNA gyrase, A subunit [Escherichia coli DEC13B]
gi|378202525|gb|EHX62952.1| DNA gyrase, A subunit [Escherichia coli DEC13D]
gi|378212271|gb|EHX72594.1| DNA gyrase, A subunit [Escherichia coli DEC13E]
gi|378217327|gb|EHX77606.1| DNA gyrase, A subunit [Escherichia coli DEC14A]
gi|378218890|gb|EHX79159.1| DNA gyrase, A subunit [Escherichia coli DEC14B]
gi|378227868|gb|EHX88036.1| DNA gyrase, A subunit [Escherichia coli DEC14C]
gi|378231335|gb|EHX91446.1| DNA gyrase, A subunit [Escherichia coli DEC14D]
gi|383103658|gb|AFG41167.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Escherichia coli P12b]
gi|383392316|gb|AFH17274.1| DNA gyrase subunit A [Escherichia coli KO11FL]
gi|383405791|gb|AFH12034.1| DNA gyrase subunit A [Escherichia coli W]
gi|383467654|gb|EID62675.1| DNA gyrase subunit A [Shigella flexneri 5a str. M90T]
gi|383475262|gb|EID67227.1| DNA gyrase, A subunit [Escherichia coli W26]
gi|384380045|gb|EIE37912.1| DNA gyrase, A subunit [Escherichia coli J53]
gi|385157045|gb|EIF19038.1| DNA gyrase subunit A [Escherichia coli O32:H37 str. P4]
gi|385537006|gb|EIF83891.1| DNA gyrase subunit A [Escherichia coli M919]
gi|385706626|gb|EIG43665.1| DNA gyrase subunit A [Escherichia coli H730]
gi|385712154|gb|EIG49109.1| DNA gyrase subunit A [Escherichia coli B799]
gi|386141435|gb|EIG82587.1| DNA gyrase, A subunit [Escherichia coli 1.2741]
gi|386147454|gb|EIG93894.1| DNA gyrase, A subunit [Escherichia coli 97.0246]
gi|386152988|gb|EIH04277.1| DNA gyrase, A subunit [Escherichia coli 5.0588]
gi|386163401|gb|EIH25196.1| DNA gyrase, A subunit [Escherichia coli 1.2264]
gi|386168359|gb|EIH34875.1| DNA gyrase, A subunit [Escherichia coli 96.0497]
gi|386172911|gb|EIH44925.1| DNA gyrase, A subunit [Escherichia coli 99.0741]
gi|386178225|gb|EIH55704.1| DNA gyrase, A subunit [Escherichia coli 3.2608]
gi|386184722|gb|EIH67461.1| DNA gyrase, A subunit [Escherichia coli 93.0624]
gi|386190869|gb|EIH79615.1| DNA gyrase, A subunit [Escherichia coli 4.0522]
gi|386196700|gb|EIH90920.1| DNA gyrase, A subunit [Escherichia coli JB1-95]
gi|386202884|gb|EII01875.1| DNA gyrase, A subunit [Escherichia coli 96.154]
gi|386204958|gb|EII09469.1| DNA gyrase, A subunit [Escherichia coli 5.0959]
gi|386213884|gb|EII24309.1| DNA gyrase, A subunit [Escherichia coli 9.0111]
gi|386216010|gb|EII32502.1| DNA gyrase, A subunit [Escherichia coli 4.0967]
gi|386226661|gb|EII48963.1| DNA gyrase, A subunit [Escherichia coli 2.3916]
gi|386228749|gb|EII56105.1| DNA gyrase, A subunit [Escherichia coli 3.3884]
gi|386236592|gb|EII68568.1| DNA gyrase, A subunit [Escherichia coli 2.4168]
gi|386239672|gb|EII76599.1| DNA gyrase, A subunit [Escherichia coli 3.2303]
gi|386254437|gb|EIJ04127.1| DNA gyrase, A subunit [Escherichia coli B41]
gi|386256509|gb|EIJ12003.1| DNA gyrase, A subunit [Escherichia coli 900105 (10e)]
gi|388332163|gb|EIK98851.1| DNA gyrase subunit A [Escherichia coli O111:H11 str. CVM9534]
gi|388339398|gb|EIL05783.1| DNA gyrase subunit A [Escherichia coli O103:H2 str. CVM9450]
gi|388344702|gb|EIL10526.1| DNA gyrase subunit A [Escherichia coli O103:H25 str. CVM9340]
gi|388356821|gb|EIL21480.1| DNA gyrase subunit A [Escherichia coli O111:H8 str. CVM9570]
gi|388362901|gb|EIL26866.1| DNA gyrase subunit A [Escherichia coli O111:H8 str. CVM9574]
gi|388366826|gb|EIL30540.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM9942]
gi|388367186|gb|EIL30880.1| DNA gyrase subunit A [Escherichia coli O111:H11 str. CVM9545]
gi|388369722|gb|EIL33297.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM10026]
gi|388396783|gb|EIL57853.1| DNA gyrase subunit A [Escherichia coli 541-15]
gi|388416634|gb|EIL76515.1| DNA gyrase subunit A [Escherichia coli CUMT8]
gi|391247648|gb|EIQ06894.1| DNA gyrase, A subunit [Shigella flexneri 2850-71]
gi|391249896|gb|EIQ09119.1| DNA gyrase, A subunit [Shigella flexneri CCH060]
gi|391250960|gb|EIQ10179.1| DNA gyrase, A subunit [Shigella flexneri K-1770]
gi|391271440|gb|EIQ30314.1| DNA gyrase, A subunit [Shigella flexneri K-404]
gi|391274865|gb|EIQ33664.1| DNA gyrase, A subunit [Shigella boydii 4444-74]
gi|391305006|gb|EIQ62801.1| DNA gyrase, A subunit [Escherichia coli EPECa12]
gi|391312640|gb|EIQ70248.1| DNA gyrase, A subunit [Escherichia coli EPEC C342-62]
gi|394396125|gb|EJE72505.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM10224]
gi|394398774|gb|EJE74916.1| DNA gyrase subunit A [Escherichia coli O111:H8 str. CVM9634]
gi|394403075|gb|EJE78751.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM10021]
gi|394409866|gb|EJE84323.1| DNA gyrase subunit A [Escherichia coli O111:H11 str. CVM9553]
gi|394412574|gb|EJE86704.1| DNA gyrase subunit A [Escherichia coli O111:H11 str. CVM9455]
gi|394424771|gb|EJE97842.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM9952]
gi|394429932|gb|EJF02321.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CVM10030]
gi|397784793|gb|EJK95646.1| DNA gyrase, A subunit [Escherichia coli STEC_O31]
gi|397897353|gb|EJL13762.1| DNA gyrase, A subunit [Shigella flexneri 6603-63]
gi|408193177|gb|EKI18730.1| DNA gyrase, A subunit [Escherichia coli TW15901]
gi|408201629|gb|EKI26778.1| DNA gyrase, A subunit [Escherichia coli TW00353]
gi|408213794|gb|EKI38273.1| DNA gyrase, A subunit [Escherichia coli 3006]
gi|408296357|gb|EKJ14598.1| DNA gyrase, A subunit [Escherichia coli EC1865]
gi|408343604|gb|EKJ57998.1| DNA gyrase, A subunit [Escherichia coli 0.1288]
gi|408568131|gb|EKK44169.1| DNA gyrase, A subunit [Escherichia coli 8.0566]
gi|408569122|gb|EKK45127.1| DNA gyrase, A subunit [Escherichia coli 8.0569]
gi|421934382|gb|EKT92157.1| DNA gyrase subunit A [Escherichia coli O111:H8 str. CFSAN001632]
gi|421936151|gb|EKT93819.1| DNA gyrase subunit A [Escherichia coli O26:H11 str. CFSAN001629]
gi|421941860|gb|EKT99236.1| DNA gyrase subunit A [Escherichia coli O111:H11 str. CFSAN001630]
gi|430884683|gb|ELC07618.1| DNA gyrase subunit A [Escherichia coli KTE10]
gi|430898696|gb|ELC20829.1| DNA gyrase subunit A [Escherichia coli KTE12]
gi|430938948|gb|ELC59171.1| DNA gyrase subunit A [Escherichia coli KTE44]
gi|430997987|gb|ELD14236.1| DNA gyrase subunit A [Escherichia coli KTE206]
gi|431006974|gb|ELD21943.1| DNA gyrase subunit A [Escherichia coli KTE210]
gi|431015246|gb|ELD28801.1| DNA gyrase subunit A [Escherichia coli KTE212]
gi|431020523|gb|ELD33868.1| DNA gyrase subunit A [Escherichia coli KTE213]
gi|431060141|gb|ELD69475.1| DNA gyrase subunit A [Escherichia coli KTE234]
gi|431093270|gb|ELD98938.1| DNA gyrase subunit A [Escherichia coli KTE51]
gi|431114544|gb|ELE18072.1| DNA gyrase subunit A [Escherichia coli KTE56]
gi|431170672|gb|ELE70861.1| DNA gyrase subunit A [Escherichia coli KTE81]
gi|431199205|gb|ELE97958.1| DNA gyrase subunit A [Escherichia coli KTE111]
gi|431210222|gb|ELF08284.1| DNA gyrase subunit A [Escherichia coli KTE119]
gi|431213877|gb|ELF11732.1| DNA gyrase subunit A [Escherichia coli KTE142]
gi|431221846|gb|ELF19143.1| DNA gyrase subunit A [Escherichia coli KTE156]
gi|431226552|gb|ELF23711.1| DNA gyrase subunit A [Escherichia coli KTE161]
gi|431242694|gb|ELF37106.1| DNA gyrase subunit A [Escherichia coli KTE171]
gi|431256787|gb|ELF49722.1| DNA gyrase subunit A [Escherichia coli KTE8]
gi|431282205|gb|ELF73090.1| DNA gyrase subunit A [Escherichia coli KTE42]
gi|431296691|gb|ELF86402.1| DNA gyrase subunit A [Escherichia coli KTE29]
gi|431309796|gb|ELF97989.1| DNA gyrase subunit A [Escherichia coli KTE48]
gi|431354527|gb|ELG41253.1| DNA gyrase subunit A [Escherichia coli KTE91]
gi|431376224|gb|ELG61547.1| DNA gyrase subunit A [Escherichia coli KTE135]
gi|431385573|gb|ELG69560.1| DNA gyrase subunit A [Escherichia coli KTE136]
gi|431389087|gb|ELG72802.1| DNA gyrase subunit A [Escherichia coli KTE140]
gi|431404863|gb|ELG88109.1| DNA gyrase subunit A [Escherichia coli KTE146]
gi|431453187|gb|ELH33597.1| DNA gyrase subunit A [Escherichia coli KTE184]
gi|431458082|gb|ELH38419.1| DNA gyrase subunit A [Escherichia coli KTE196]
gi|431467136|gb|ELH47147.1| DNA gyrase subunit A [Escherichia coli KTE197]
gi|431471450|gb|ELH51343.1| DNA gyrase subunit A [Escherichia coli KTE203]
gi|431555646|gb|ELI29485.1| DNA gyrase subunit A [Escherichia coli KTE117]
gi|431564380|gb|ELI37554.1| DNA gyrase subunit A [Escherichia coli KTE120]
gi|431596638|gb|ELI66590.1| DNA gyrase subunit A [Escherichia coli KTE131]
gi|431609945|gb|ELI79250.1| DNA gyrase subunit A [Escherichia coli KTE138]
gi|431645599|gb|ELJ13143.1| DNA gyrase subunit A [Escherichia coli KTE163]
gi|431656142|gb|ELJ23163.1| DNA gyrase subunit A [Escherichia coli KTE166]
gi|431691896|gb|ELJ57341.1| DNA gyrase subunit A [Escherichia coli KTE232]
gi|431715756|gb|ELJ79901.1| DNA gyrase subunit A [Escherichia coli KTE90]
gi|431721396|gb|ELJ85391.1| DNA gyrase subunit A [Escherichia coli KTE95]
gi|443422818|gb|AGC87722.1| DNA gyrase subunit A [Escherichia coli APEC O78]
gi|449319942|gb|EMD09984.1| DNA gyrase subunit A [Escherichia coli S17]
Length = 875
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|41642|emb|CAA40461.1| DNA gyrase subunit A [Escherichia coli K-12]
Length = 875
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPEPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|387892904|ref|YP_006323201.1| DNA gyrase subunit A [Pseudomonas fluorescens A506]
gi|387161526|gb|AFJ56725.1| DNA gyrase, A subunit [Pseudomonas fluorescens A506]
Length = 884
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/850 (52%), Positives = 633/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV+E+ +GR+TQGV LI +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAK 830
Query: 840 KSKLCGVQRL 849
KL G++R+
Sbjct: 831 DEKLVGLERV 840
>gi|194433361|ref|ZP_03065641.1| DNA gyrase, A subunit [Shigella dysenteriae 1012]
gi|416286531|ref|ZP_11648430.1| DNA gyrase subunit A [Shigella boydii ATCC 9905]
gi|417671531|ref|ZP_12321020.1| DNA gyrase, A subunit [Shigella dysenteriae 155-74]
gi|417688578|ref|ZP_12337821.1| DNA gyrase, A subunit [Shigella boydii 5216-82]
gi|420348121|ref|ZP_14849510.1| DNA gyrase, A subunit [Shigella boydii 965-58]
gi|432602785|ref|ZP_19839029.1| DNA gyrase subunit A [Escherichia coli KTE66]
gi|194418455|gb|EDX34544.1| DNA gyrase, A subunit [Shigella dysenteriae 1012]
gi|320178796|gb|EFW53759.1| DNA gyrase subunit A [Shigella boydii ATCC 9905]
gi|332093869|gb|EGI98923.1| DNA gyrase, A subunit [Shigella boydii 5216-82]
gi|332096157|gb|EGJ01160.1| DNA gyrase, A subunit [Shigella dysenteriae 155-74]
gi|391269124|gb|EIQ28036.1| DNA gyrase, A subunit [Shigella boydii 965-58]
gi|431141359|gb|ELE43124.1| DNA gyrase subunit A [Escherichia coli KTE66]
Length = 875
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 639/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDGKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|4886573|dbj|BAA77788.1| DNA gyrase [Vibrio parahaemolyticus]
Length = 878
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/852 (54%), Positives = 625/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFP A +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPAAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-EKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I +IR TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGIRDGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILA 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ + + RR+EI + + E+
Sbjct: 476 EYKELLEEIAELMHILASTERLMEVIREELEAVRDGFA----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L++ E+IT ILP+ +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEDGERITAILPVD----EFSADKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +T GS DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIAVNLRDDDSLIGVDITTGSSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L +V++L+V +N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLADDDQVVSLIVPSNEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDESVVGLQRI 838
>gi|74312751|ref|YP_311170.1| DNA gyrase subunit A [Shigella sonnei Ss046]
gi|424463048|ref|ZP_17913527.1| DNA gyrase, A subunit [Escherichia coli PA39]
gi|432476458|ref|ZP_19718457.1| DNA gyrase subunit A [Escherichia coli KTE208]
gi|432543841|ref|ZP_19780684.1| DNA gyrase subunit A [Escherichia coli KTE236]
gi|432549331|ref|ZP_19786099.1| DNA gyrase subunit A [Escherichia coli KTE237]
gi|73856228|gb|AAZ88935.1| DNA gyrase subunit A [Shigella sonnei Ss046]
gi|390769051|gb|EIO38007.1| DNA gyrase, A subunit [Escherichia coli PA39]
gi|431005626|gb|ELD20647.1| DNA gyrase subunit A [Escherichia coli KTE208]
gi|431074251|gb|ELD81815.1| DNA gyrase subunit A [Escherichia coli KTE236]
gi|431079609|gb|ELD86563.1| DNA gyrase subunit A [Escherichia coli KTE237]
Length = 875
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|331647885|ref|ZP_08348977.1| DNA gyrase, A subunit [Escherichia coli M605]
gi|387830165|ref|YP_003350102.1| DNA gyrase subunit A [Escherichia coli SE15]
gi|432398058|ref|ZP_19640839.1| DNA gyrase subunit A [Escherichia coli KTE25]
gi|432407286|ref|ZP_19649995.1| DNA gyrase subunit A [Escherichia coli KTE28]
gi|432422579|ref|ZP_19665124.1| DNA gyrase subunit A [Escherichia coli KTE178]
gi|432711282|ref|ZP_19946342.1| DNA gyrase subunit A [Escherichia coli KTE6]
gi|432723682|ref|ZP_19958602.1| DNA gyrase subunit A [Escherichia coli KTE17]
gi|432728269|ref|ZP_19963148.1| DNA gyrase subunit A [Escherichia coli KTE18]
gi|432741963|ref|ZP_19976682.1| DNA gyrase subunit A [Escherichia coli KTE23]
gi|432895248|ref|ZP_20106968.1| DNA gyrase subunit A [Escherichia coli KTE165]
gi|432919695|ref|ZP_20123809.1| DNA gyrase subunit A [Escherichia coli KTE173]
gi|432927597|ref|ZP_20129026.1| DNA gyrase subunit A [Escherichia coli KTE175]
gi|432981659|ref|ZP_20170434.1| DNA gyrase subunit A [Escherichia coli KTE211]
gi|432991270|ref|ZP_20179934.1| DNA gyrase subunit A [Escherichia coli KTE217]
gi|433097101|ref|ZP_20283285.1| DNA gyrase subunit A [Escherichia coli KTE139]
gi|433111481|ref|ZP_20297346.1| DNA gyrase subunit A [Escherichia coli KTE150]
gi|281179322|dbj|BAI55652.1| DNA gyrase subunit A [Escherichia coli SE15]
gi|331043609|gb|EGI15747.1| DNA gyrase, A subunit [Escherichia coli M605]
gi|430916162|gb|ELC37240.1| DNA gyrase subunit A [Escherichia coli KTE25]
gi|430930045|gb|ELC50554.1| DNA gyrase subunit A [Escherichia coli KTE28]
gi|430944191|gb|ELC64290.1| DNA gyrase subunit A [Escherichia coli KTE178]
gi|431248962|gb|ELF43137.1| DNA gyrase subunit A [Escherichia coli KTE6]
gi|431266236|gb|ELF57798.1| DNA gyrase subunit A [Escherichia coli KTE17]
gi|431273958|gb|ELF65032.1| DNA gyrase subunit A [Escherichia coli KTE18]
gi|431283654|gb|ELF74513.1| DNA gyrase subunit A [Escherichia coli KTE23]
gi|431421615|gb|ELH03827.1| DNA gyrase subunit A [Escherichia coli KTE165]
gi|431443739|gb|ELH24765.1| DNA gyrase subunit A [Escherichia coli KTE173]
gi|431444120|gb|ELH25144.1| DNA gyrase subunit A [Escherichia coli KTE175]
gi|431490968|gb|ELH70575.1| DNA gyrase subunit A [Escherichia coli KTE211]
gi|431495352|gb|ELH74938.1| DNA gyrase subunit A [Escherichia coli KTE217]
gi|431615449|gb|ELI84578.1| DNA gyrase subunit A [Escherichia coli KTE139]
gi|431628785|gb|ELI97161.1| DNA gyrase subunit A [Escherichia coli KTE150]
Length = 875
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|432875869|ref|ZP_20094029.1| DNA gyrase subunit A [Escherichia coli KTE154]
gi|431420141|gb|ELH02473.1| DNA gyrase subunit A [Escherichia coli KTE154]
Length = 875
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVTNPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|300926335|ref|ZP_07142135.1| DNA gyrase, A subunit [Escherichia coli MS 182-1]
gi|422956403|ref|ZP_16968877.1| DNA gyrase subunit A [Escherichia coli H494]
gi|300417612|gb|EFK00923.1| DNA gyrase, A subunit [Escherichia coli MS 182-1]
gi|371599938|gb|EHN88716.1| DNA gyrase subunit A [Escherichia coli H494]
Length = 875
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTTED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|83647663|ref|YP_436098.1| DNA gyrase subunit A [Hahella chejuensis KCTC 2396]
gi|83635706|gb|ABC31673.1| DNA gyrase, A subunit [Hahella chejuensis KCTC 2396]
Length = 879
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/851 (52%), Positives = 631/851 (74%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MAELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGSIDGDSAAAM
Sbjct: 61 KSYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DLDKET+DF NYDG E+ P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKIAHEMLADLDKETVDFAPNYDGSEQIPVVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L L N + +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVVNGCLAYLDNSDITIDELMEFIPGPDFPTAAIINGRAGILEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE+ + ++ I+I E+PYQVNK L+EKI++LVKEKK+E I+ LRDES K G
Sbjct: 241 YIRARYEIEQDKKTSKETIVITEIPYQVNKAKLVEKIAELVKEKKVEGITELRDESSKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL+R E ++++N L+ T L+ FG+NM+AL+NG+PKLLNLK+ + F+ HR+E
Sbjct: 301 MRVVIELRRGENADVLMNNLFALTPLETVFGINMVALINGEPKLLNLKDCIECFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE HILEG +AL NID I +I+++ST EAK +++ W V
Sbjct: 361 VVTRRTIYELRKARERGHILEGQAVALANIDPVIAVIKASSTGAEAKERLMAQGWAPGAV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ ++ + L+ +Y LS++QAQ IL + LQ+LT +E +KI ++Y
Sbjct: 421 TGMLERAGEDACRPDDLAPEFGLREG-LYYLSEVQAQSILDLRLQKLTGLEIEKINDEYR 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++I+++ +L +IL N +R++ +I +EL ++ ++G ++R +EI + + + DLIA
Sbjct: 480 SIIEQIAELLEILQNPERLMAVIREELEAVREEFG----DVRVTEITASKRDLTIADLIA 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+TLS+ GY K+QP+ Y+AQKRGG+GK A +DED++ +L IAN+HD ILCF++
Sbjct: 536 EEDMVVTLSHKGYAKTQPLEAYQAQKRGGKGKAATAIRDEDFVEKLLIANSHDTILCFTS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+LYWLK ++IPQ SR SRG+PI+N+ L E+IT +LP+ R++ ++YVFM+T
Sbjct: 596 HGKLYWLKTYEIPQASRISRGRPIVNILPLAENERITTMLPV----REYTADHYVFMATR 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L NFS PR SG+IA+ L D LIGAA+TDG D+MLFS SGKA+RFNE+ V
Sbjct: 652 QGTVKKTPLENFSRPRSSGLIALALDEGDMLIGAAITDGKKDVMLFSSSGKAIRFNEDDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+RL + Q V++L++ + +LTA+ GYGKRT + E+ + RG +G
Sbjct: 712 RPMGRTARGVRGIRLAQGQTVVSLIIP-QEDAYILTASRKGYGKRTAVSEFPVYGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+ ++RNG +V+A V ++MLI+ G L+RTR E+ +GR+TQGV LI +
Sbjct: 771 VIAIQCSERNGDLVSAVQVISGDQLMLISNQGTLVRTRSDEVSIVGRNTQGVRLIRLSES 830
Query: 841 SKLCGVQRLCK 851
L GV+R+ +
Sbjct: 831 EDLVGVERIAE 841
>gi|134301444|ref|YP_001121412.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
WY96-3418]
gi|421751196|ref|ZP_16188251.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
AS_713]
gi|421753051|ref|ZP_16190056.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis 831]
gi|421756783|ref|ZP_16193679.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
80700103]
gi|421758649|ref|ZP_16195492.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
70102010]
gi|424673918|ref|ZP_18110846.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
70001275]
gi|134049221|gb|ABO46292.1| DNA gyrase, A subunit [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409088414|gb|EKM88485.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis 831]
gi|409088668|gb|EKM88731.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
AS_713]
gi|409091928|gb|EKM91912.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
70102010]
gi|409093218|gb|EKM93171.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
80700103]
gi|417435461|gb|EKT90362.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
70001275]
Length = 868
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/848 (55%), Positives = 626/848 (73%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIITKESSSINIEKELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ NP +I +LI+ I APDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTIALIDNPNLTIEELIEYILAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E + II+ E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKAQIIVTEIPYQVNKAKLVEKIAELVKDKKVAGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIELIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q + Y L++ QA IL + L RLT +EQ KI+N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQVDSSYNLTEEQADAILALRLHRLTGLEQDKIVNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I ++ L ILS+ K +I ++ DEL I++ YG R+SEII + ++ + EDLI
Sbjct: 480 KELIDRIKYLISILSDIKELIRVVKDELVEIRDNYGDQ----RKSEIIESRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 AEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L+ E+IT ++P+S F + YVFM+T
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLEKDERITAMMPISQ----FNEGWYVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDG+ IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHHNQKIVSVIVTNPDEGIVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV +I++IT G L+RT E+R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 105/205 (51%), Gaps = 14/205 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + + + I+ FS+ G+
Sbjct: 647 VFMATKLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHHNQKIVSVI-VTN-----PDEGIVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L + DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLV 746
GRSA+GV + L +K+I+L V
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKV 840
>gi|15832368|ref|NP_311141.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. Sakai]
gi|168749632|ref|ZP_02774654.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4113]
gi|168754976|ref|ZP_02779983.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4401]
gi|168761339|ref|ZP_02786346.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4501]
gi|168767849|ref|ZP_02792856.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4486]
gi|168773053|ref|ZP_02798060.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4196]
gi|168780078|ref|ZP_02805085.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4076]
gi|168787135|ref|ZP_02812142.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC869]
gi|168798393|ref|ZP_02823400.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC508]
gi|195935604|ref|ZP_03080986.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. EC4024]
gi|208809585|ref|ZP_03251922.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4206]
gi|208814055|ref|ZP_03255384.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4045]
gi|208818870|ref|ZP_03259190.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4042]
gi|209395953|ref|YP_002271637.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. EC4115]
gi|217326866|ref|ZP_03442949.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. TW14588]
gi|218705761|ref|YP_002413280.1| DNA gyrase subunit A [Escherichia coli UMN026]
gi|254794122|ref|YP_003078959.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. TW14359]
gi|261223316|ref|ZP_05937597.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259134|ref|ZP_05951667.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
O157:H7 str. FRIK966]
gi|291283475|ref|YP_003500293.1| DNA gyrase, A subunit [Escherichia coli O55:H7 str. CB9615]
gi|293405697|ref|ZP_06649689.1| DNA gyrase subunit A [Escherichia coli FVEC1412]
gi|293410594|ref|ZP_06654170.1| A subunit [Escherichia coli B354]
gi|293415524|ref|ZP_06658167.1| A subunit [Escherichia coli B185]
gi|298381378|ref|ZP_06990977.1| DNA gyrase subunit A [Escherichia coli FVEC1302]
gi|300936783|ref|ZP_07151676.1| DNA gyrase, A subunit [Escherichia coli MS 21-1]
gi|331653665|ref|ZP_08354666.1| DNA gyrase, A subunit [Escherichia coli M718]
gi|331673745|ref|ZP_08374508.1| DNA gyrase, A subunit [Escherichia coli TA280]
gi|331683907|ref|ZP_08384503.1| DNA gyrase, A subunit [Escherichia coli H299]
gi|383179200|ref|YP_005457205.1| DNA gyrase subunit A [Shigella sonnei 53G]
gi|387507617|ref|YP_006159873.1| DNA gyrase subunit A [Escherichia coli O55:H7 str. RM12579]
gi|387607922|ref|YP_006096778.1| DNA gyrase subunit A [Escherichia coli 042]
gi|387883445|ref|YP_006313747.1| DNA gyrase subunit A [Escherichia coli Xuzhou21]
gi|415844496|ref|ZP_11524238.1| DNA gyrase, A subunit [Shigella sonnei 53G]
gi|416310901|ref|ZP_11656636.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. 1044]
gi|416318201|ref|ZP_11660911.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. EC1212]
gi|416330569|ref|ZP_11669519.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. 1125]
gi|416775512|ref|ZP_11874352.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. G5101]
gi|416787173|ref|ZP_11879261.1| DNA gyrase subunit A [Escherichia coli O157:H- str. 493-89]
gi|416798829|ref|ZP_11884178.1| DNA gyrase subunit A [Escherichia coli O157:H- str. H 2687]
gi|416809200|ref|ZP_11888863.1| DNA gyrase subunit A [Escherichia coli O55:H7 str. 3256-97]
gi|416819700|ref|ZP_11893422.1| DNA gyrase subunit A [Escherichia coli O55:H7 str. USDA 5905]
gi|417138971|ref|ZP_11982498.1| DNA gyrase, A subunit [Escherichia coli 97.0259]
gi|417587246|ref|ZP_12238016.1| DNA gyrase, A subunit [Escherichia coli STEC_C165-02]
gi|417629491|ref|ZP_12279728.1| DNA gyrase, A subunit [Escherichia coli STEC_MHI813]
gi|418266630|ref|ZP_12886111.1| DNA gyrase, A subunit [Shigella sonnei str. Moseley]
gi|419046364|ref|ZP_13593301.1| DNA gyrase, A subunit [Escherichia coli DEC3A]
gi|419051942|ref|ZP_13598814.1| DNA gyrase, A subunit [Escherichia coli DEC3B]
gi|419057976|ref|ZP_13604781.1| DNA gyrase, A subunit [Escherichia coli DEC3C]
gi|419063444|ref|ZP_13610172.1| DNA gyrase, A subunit [Escherichia coli DEC3D]
gi|419070340|ref|ZP_13615963.1| DNA gyrase, A subunit [Escherichia coli DEC3E]
gi|419076418|ref|ZP_13621936.1| DNA gyrase, A subunit [Escherichia coli DEC3F]
gi|419081432|ref|ZP_13626880.1| DNA gyrase, A subunit [Escherichia coli DEC4A]
gi|419087207|ref|ZP_13632564.1| DNA gyrase, A subunit [Escherichia coli DEC4B]
gi|419093355|ref|ZP_13638640.1| DNA gyrase, A subunit [Escherichia coli DEC4C]
gi|419099099|ref|ZP_13644298.1| DNA gyrase, A subunit [Escherichia coli DEC4D]
gi|419104795|ref|ZP_13649924.1| DNA gyrase, A subunit [Escherichia coli DEC4E]
gi|419110252|ref|ZP_13655310.1| DNA gyrase, A subunit [Escherichia coli DEC4F]
gi|419115566|ref|ZP_13660583.1| DNA gyrase, A subunit [Escherichia coli DEC5A]
gi|419121194|ref|ZP_13666150.1| DNA gyrase, A subunit [Escherichia coli DEC5B]
gi|419126728|ref|ZP_13671613.1| DNA gyrase, A subunit [Escherichia coli DEC5C]
gi|419132249|ref|ZP_13677086.1| DNA gyrase, A subunit [Escherichia coli DEC5D]
gi|419137282|ref|ZP_13682078.1| DNA gyrase, A subunit [Escherichia coli DEC5E]
gi|419920612|ref|ZP_14438724.1| DNA gyrase subunit A [Escherichia coli KD2]
gi|420270765|ref|ZP_14773123.1| DNA gyrase, A subunit [Escherichia coli PA22]
gi|420276245|ref|ZP_14778529.1| DNA gyrase, A subunit [Escherichia coli PA40]
gi|420281494|ref|ZP_14783732.1| DNA gyrase, A subunit [Escherichia coli TW06591]
gi|420287605|ref|ZP_14789796.1| DNA gyrase, A subunit [Escherichia coli TW10246]
gi|420293184|ref|ZP_14795307.1| DNA gyrase, A subunit [Escherichia coli TW11039]
gi|420299059|ref|ZP_14801108.1| DNA gyrase, A subunit [Escherichia coli TW09109]
gi|420305065|ref|ZP_14807061.1| DNA gyrase, A subunit [Escherichia coli TW10119]
gi|420310415|ref|ZP_14812348.1| DNA gyrase, A subunit [Escherichia coli EC1738]
gi|420315841|ref|ZP_14817717.1| DNA gyrase, A subunit [Escherichia coli EC1734]
gi|420359307|ref|ZP_14860281.1| DNA gyrase, A subunit [Shigella sonnei 3226-85]
gi|420363992|ref|ZP_14864875.1| DNA gyrase, A subunit [Shigella sonnei 4822-66]
gi|421813151|ref|ZP_16248875.1| DNA gyrase, A subunit [Escherichia coli 8.0416]
gi|421819036|ref|ZP_16254534.1| DNA gyrase, A subunit [Escherichia coli 10.0821]
gi|421824861|ref|ZP_16260228.1| DNA gyrase, A subunit [Escherichia coli FRIK920]
gi|421831762|ref|ZP_16267049.1| DNA gyrase, A subunit [Escherichia coli PA7]
gi|422334284|ref|ZP_16415291.1| DNA gyrase subunit A [Escherichia coli 4_1_47FAA]
gi|422834609|ref|ZP_16882670.1| DNA gyrase subunit A [Escherichia coli E101]
gi|422979009|ref|ZP_16977788.1| DNA gyrase subunit A [Escherichia coli TA124]
gi|423725821|ref|ZP_17699931.1| DNA gyrase, A subunit [Escherichia coli PA31]
gi|424078261|ref|ZP_17815265.1| DNA gyrase, A subunit [Escherichia coli FDA505]
gi|424084718|ref|ZP_17821228.1| DNA gyrase, A subunit [Escherichia coli FDA517]
gi|424091200|ref|ZP_17827145.1| DNA gyrase, A subunit [Escherichia coli FRIK1996]
gi|424097776|ref|ZP_17833113.1| DNA gyrase, A subunit [Escherichia coli FRIK1985]
gi|424103975|ref|ZP_17838774.1| DNA gyrase, A subunit [Escherichia coli FRIK1990]
gi|424110678|ref|ZP_17844936.1| DNA gyrase, A subunit [Escherichia coli 93-001]
gi|424116567|ref|ZP_17850431.1| DNA gyrase, A subunit [Escherichia coli PA3]
gi|424122782|ref|ZP_17856130.1| DNA gyrase, A subunit [Escherichia coli PA5]
gi|424128921|ref|ZP_17861845.1| DNA gyrase, A subunit [Escherichia coli PA9]
gi|424135174|ref|ZP_17867660.1| DNA gyrase, A subunit [Escherichia coli PA10]
gi|424141775|ref|ZP_17873688.1| DNA gyrase, A subunit [Escherichia coli PA14]
gi|424148205|ref|ZP_17879603.1| DNA gyrase, A subunit [Escherichia coli PA15]
gi|424154081|ref|ZP_17885057.1| DNA gyrase, A subunit [Escherichia coli PA24]
gi|424247905|ref|ZP_17890540.1| DNA gyrase, A subunit [Escherichia coli PA25]
gi|424324441|ref|ZP_17896462.1| DNA gyrase, A subunit [Escherichia coli PA28]
gi|424450465|ref|ZP_17902190.1| DNA gyrase, A subunit [Escherichia coli PA32]
gi|424456661|ref|ZP_17907823.1| DNA gyrase, A subunit [Escherichia coli PA33]
gi|424469412|ref|ZP_17919258.1| DNA gyrase, A subunit [Escherichia coli PA41]
gi|424475952|ref|ZP_17925295.1| DNA gyrase, A subunit [Escherichia coli PA42]
gi|424481703|ref|ZP_17930702.1| DNA gyrase, A subunit [Escherichia coli TW07945]
gi|424487852|ref|ZP_17936440.1| DNA gyrase, A subunit [Escherichia coli TW09098]
gi|424494442|ref|ZP_17942215.1| DNA gyrase, A subunit [Escherichia coli TW09195]
gi|424501222|ref|ZP_17948146.1| DNA gyrase, A subunit [Escherichia coli EC4203]
gi|424507454|ref|ZP_17953884.1| DNA gyrase, A subunit [Escherichia coli EC4196]
gi|424514779|ref|ZP_17959495.1| DNA gyrase, A subunit [Escherichia coli TW14313]
gi|424521100|ref|ZP_17965243.1| DNA gyrase, A subunit [Escherichia coli TW14301]
gi|424526936|ref|ZP_17970670.1| DNA gyrase, A subunit [Escherichia coli EC4421]
gi|424533097|ref|ZP_17976462.1| DNA gyrase, A subunit [Escherichia coli EC4422]
gi|424539161|ref|ZP_17982130.1| DNA gyrase, A subunit [Escherichia coli EC4013]
gi|424545181|ref|ZP_17987630.1| DNA gyrase, A subunit [Escherichia coli EC4402]
gi|424551436|ref|ZP_17993320.1| DNA gyrase, A subunit [Escherichia coli EC4439]
gi|424557622|ref|ZP_17999059.1| DNA gyrase, A subunit [Escherichia coli EC4436]
gi|424563969|ref|ZP_18004989.1| DNA gyrase, A subunit [Escherichia coli EC4437]
gi|424570094|ref|ZP_18010679.1| DNA gyrase, A subunit [Escherichia coli EC4448]
gi|424576257|ref|ZP_18016360.1| DNA gyrase, A subunit [Escherichia coli EC1845]
gi|424582101|ref|ZP_18021770.1| DNA gyrase, A subunit [Escherichia coli EC1863]
gi|425098820|ref|ZP_18501572.1| DNA gyrase, A subunit [Escherichia coli 3.4870]
gi|425104949|ref|ZP_18507278.1| DNA gyrase, A subunit [Escherichia coli 5.2239]
gi|425110868|ref|ZP_18512803.1| DNA gyrase, A subunit [Escherichia coli 6.0172]
gi|425126808|ref|ZP_18528004.1| DNA gyrase, A subunit [Escherichia coli 8.0586]
gi|425132566|ref|ZP_18533430.1| DNA gyrase, A subunit [Escherichia coli 8.2524]
gi|425139034|ref|ZP_18539440.1| DNA gyrase, A subunit [Escherichia coli 10.0833]
gi|425144897|ref|ZP_18544906.1| DNA gyrase, A subunit [Escherichia coli 10.0869]
gi|425150940|ref|ZP_18550574.1| DNA gyrase, A subunit [Escherichia coli 88.0221]
gi|425156823|ref|ZP_18556104.1| DNA gyrase, A subunit [Escherichia coli PA34]
gi|425163261|ref|ZP_18562156.1| DNA gyrase, A subunit [Escherichia coli FDA506]
gi|425168927|ref|ZP_18567426.1| DNA gyrase, A subunit [Escherichia coli FDA507]
gi|425175060|ref|ZP_18573190.1| DNA gyrase, A subunit [Escherichia coli FDA504]
gi|425181091|ref|ZP_18578797.1| DNA gyrase, A subunit [Escherichia coli FRIK1999]
gi|425187357|ref|ZP_18584640.1| DNA gyrase, A subunit [Escherichia coli FRIK1997]
gi|425194126|ref|ZP_18590909.1| DNA gyrase, A subunit [Escherichia coli NE1487]
gi|425200561|ref|ZP_18596791.1| DNA gyrase, A subunit [Escherichia coli NE037]
gi|425206984|ref|ZP_18602796.1| DNA gyrase, A subunit [Escherichia coli FRIK2001]
gi|425212674|ref|ZP_18608095.1| DNA gyrase, A subunit [Escherichia coli PA4]
gi|425218790|ref|ZP_18613781.1| DNA gyrase, A subunit [Escherichia coli PA23]
gi|425225318|ref|ZP_18619819.1| DNA gyrase, A subunit [Escherichia coli PA49]
gi|425231682|ref|ZP_18625731.1| DNA gyrase, A subunit [Escherichia coli PA45]
gi|425237599|ref|ZP_18631329.1| DNA gyrase, A subunit [Escherichia coli TT12B]
gi|425243818|ref|ZP_18637138.1| DNA gyrase, A subunit [Escherichia coli MA6]
gi|425249943|ref|ZP_18642892.1| DNA gyrase, A subunit [Escherichia coli 5905]
gi|425255800|ref|ZP_18648335.1| DNA gyrase, A subunit [Escherichia coli CB7326]
gi|425262019|ref|ZP_18654049.1| DNA gyrase, A subunit [Escherichia coli EC96038]
gi|425268055|ref|ZP_18659699.1| DNA gyrase, A subunit [Escherichia coli 5412]
gi|425295490|ref|ZP_18685710.1| DNA gyrase, A subunit [Escherichia coli PA38]
gi|425305953|ref|ZP_18695664.1| DNA gyrase, A subunit [Escherichia coli N1]
gi|425312158|ref|ZP_18701360.1| DNA gyrase, A subunit [Escherichia coli EC1735]
gi|425318105|ref|ZP_18706915.1| DNA gyrase, A subunit [Escherichia coli EC1736]
gi|425324206|ref|ZP_18712596.1| DNA gyrase, A subunit [Escherichia coli EC1737]
gi|425330489|ref|ZP_18718378.1| DNA gyrase, A subunit [Escherichia coli EC1846]
gi|425336653|ref|ZP_18724060.1| DNA gyrase, A subunit [Escherichia coli EC1847]
gi|425343061|ref|ZP_18729978.1| DNA gyrase, A subunit [Escherichia coli EC1848]
gi|425348861|ref|ZP_18735360.1| DNA gyrase, A subunit [Escherichia coli EC1849]
gi|425355158|ref|ZP_18741248.1| DNA gyrase, A subunit [Escherichia coli EC1850]
gi|425361118|ref|ZP_18746791.1| DNA gyrase, A subunit [Escherichia coli EC1856]
gi|425367288|ref|ZP_18752486.1| DNA gyrase, A subunit [Escherichia coli EC1862]
gi|425373664|ref|ZP_18758330.1| DNA gyrase, A subunit [Escherichia coli EC1864]
gi|425386511|ref|ZP_18770091.1| DNA gyrase, A subunit [Escherichia coli EC1866]
gi|425393234|ref|ZP_18776364.1| DNA gyrase, A subunit [Escherichia coli EC1868]
gi|425399330|ref|ZP_18782060.1| DNA gyrase, A subunit [Escherichia coli EC1869]
gi|425405409|ref|ZP_18787665.1| DNA gyrase, A subunit [Escherichia coli EC1870]
gi|425411814|ref|ZP_18793605.1| DNA gyrase, A subunit [Escherichia coli NE098]
gi|425418145|ref|ZP_18799439.1| DNA gyrase, A subunit [Escherichia coli FRIK523]
gi|425429474|ref|ZP_18810100.1| DNA gyrase, A subunit [Escherichia coli 0.1304]
gi|428947844|ref|ZP_19020150.1| DNA gyrase, A subunit [Escherichia coli 88.1467]
gi|428953945|ref|ZP_19025760.1| DNA gyrase, A subunit [Escherichia coli 88.1042]
gi|428959882|ref|ZP_19031216.1| DNA gyrase, A subunit [Escherichia coli 89.0511]
gi|428966451|ref|ZP_19037229.1| DNA gyrase, A subunit [Escherichia coli 90.0091]
gi|428972184|ref|ZP_19042546.1| DNA gyrase, A subunit [Escherichia coli 90.0039]
gi|428978783|ref|ZP_19048626.1| DNA gyrase, A subunit [Escherichia coli 90.2281]
gi|428984484|ref|ZP_19053896.1| DNA gyrase, A subunit [Escherichia coli 93.0055]
gi|428990704|ref|ZP_19059711.1| DNA gyrase, A subunit [Escherichia coli 93.0056]
gi|428996504|ref|ZP_19065133.1| DNA gyrase, A subunit [Escherichia coli 94.0618]
gi|429002745|ref|ZP_19070906.1| DNA gyrase, A subunit [Escherichia coli 95.0183]
gi|429008884|ref|ZP_19076428.1| DNA gyrase, A subunit [Escherichia coli 95.1288]
gi|429015329|ref|ZP_19082250.1| DNA gyrase, A subunit [Escherichia coli 95.0943]
gi|429021217|ref|ZP_19087756.1| DNA gyrase, A subunit [Escherichia coli 96.0428]
gi|429027293|ref|ZP_19093326.1| DNA gyrase, A subunit [Escherichia coli 96.0427]
gi|429033500|ref|ZP_19099042.1| DNA gyrase, A subunit [Escherichia coli 96.0939]
gi|429039599|ref|ZP_19104732.1| DNA gyrase, A subunit [Escherichia coli 96.0932]
gi|429045406|ref|ZP_19110137.1| DNA gyrase, A subunit [Escherichia coli 96.0107]
gi|429050899|ref|ZP_19115477.1| DNA gyrase, A subunit [Escherichia coli 97.0003]
gi|429056235|ref|ZP_19120584.1| DNA gyrase, A subunit [Escherichia coli 97.1742]
gi|429061775|ref|ZP_19125814.1| DNA gyrase, A subunit [Escherichia coli 97.0007]
gi|429068080|ref|ZP_19131564.1| DNA gyrase, A subunit [Escherichia coli 99.0672]
gi|429073984|ref|ZP_19137248.1| DNA gyrase, A subunit [Escherichia coli 99.0678]
gi|429079181|ref|ZP_19142328.1| DNA gyrase, A subunit [Escherichia coli 99.0713]
gi|429827183|ref|ZP_19358261.1| DNA gyrase, A subunit [Escherichia coli 96.0109]
gi|429833509|ref|ZP_19363906.1| DNA gyrase, A subunit [Escherichia coli 97.0010]
gi|432354169|ref|ZP_19597442.1| DNA gyrase subunit A [Escherichia coli KTE2]
gi|432392743|ref|ZP_19635573.1| DNA gyrase subunit A [Escherichia coli KTE21]
gi|432402521|ref|ZP_19645273.1| DNA gyrase subunit A [Escherichia coli KTE26]
gi|432426785|ref|ZP_19669286.1| DNA gyrase subunit A [Escherichia coli KTE181]
gi|432450387|ref|ZP_19692652.1| DNA gyrase subunit A [Escherichia coli KTE193]
gi|432461251|ref|ZP_19703400.1| DNA gyrase subunit A [Escherichia coli KTE204]
gi|432518300|ref|ZP_19755488.1| DNA gyrase subunit A [Escherichia coli KTE228]
gi|432527007|ref|ZP_19764100.1| DNA gyrase subunit A [Escherichia coli KTE233]
gi|432538421|ref|ZP_19775323.1| DNA gyrase subunit A [Escherichia coli KTE235]
gi|432622481|ref|ZP_19858512.1| DNA gyrase subunit A [Escherichia coli KTE76]
gi|432632016|ref|ZP_19867942.1| DNA gyrase subunit A [Escherichia coli KTE80]
gi|432641730|ref|ZP_19877564.1| DNA gyrase subunit A [Escherichia coli KTE83]
gi|432666625|ref|ZP_19902206.1| DNA gyrase subunit A [Escherichia coli KTE116]
gi|432680841|ref|ZP_19916215.1| DNA gyrase subunit A [Escherichia coli KTE143]
gi|432719352|ref|ZP_19954321.1| DNA gyrase subunit A [Escherichia coli KTE9]
gi|432775314|ref|ZP_20009593.1| DNA gyrase subunit A [Escherichia coli KTE54]
gi|432793445|ref|ZP_20027529.1| DNA gyrase subunit A [Escherichia coli KTE78]
gi|432799403|ref|ZP_20033425.1| DNA gyrase subunit A [Escherichia coli KTE79]
gi|432815983|ref|ZP_20049767.1| DNA gyrase subunit A [Escherichia coli KTE115]
gi|432851520|ref|ZP_20081905.1| DNA gyrase subunit A [Escherichia coli KTE144]
gi|432887211|ref|ZP_20101285.1| DNA gyrase subunit A [Escherichia coli KTE158]
gi|432913409|ref|ZP_20119106.1| DNA gyrase subunit A [Escherichia coli KTE190]
gi|433019298|ref|ZP_20207519.1| DNA gyrase subunit A [Escherichia coli KTE105]
gi|433034066|ref|ZP_20221782.1| DNA gyrase subunit A [Escherichia coli KTE112]
gi|433053838|ref|ZP_20241018.1| DNA gyrase subunit A [Escherichia coli KTE122]
gi|433068543|ref|ZP_20255333.1| DNA gyrase subunit A [Escherichia coli KTE128]
gi|433159272|ref|ZP_20344110.1| DNA gyrase subunit A [Escherichia coli KTE177]
gi|433179085|ref|ZP_20363485.1| DNA gyrase subunit A [Escherichia coli KTE82]
gi|444925770|ref|ZP_21245086.1| DNA gyrase, A subunit [Escherichia coli 09BKT078844]
gi|444931475|ref|ZP_21250532.1| DNA gyrase, A subunit [Escherichia coli 99.0814]
gi|444936884|ref|ZP_21255679.1| DNA gyrase, A subunit [Escherichia coli 99.0815]
gi|444942511|ref|ZP_21261047.1| DNA gyrase, A subunit [Escherichia coli 99.0816]
gi|444947971|ref|ZP_21266293.1| DNA gyrase, A subunit [Escherichia coli 99.0839]
gi|444953581|ref|ZP_21271692.1| DNA gyrase, A subunit [Escherichia coli 99.0848]
gi|444959071|ref|ZP_21276940.1| DNA gyrase, A subunit [Escherichia coli 99.1753]
gi|444966760|ref|ZP_21284275.1| DNA gyrase, A subunit [Escherichia coli 99.1775]
gi|444970206|ref|ZP_21287582.1| DNA gyrase, A subunit [Escherichia coli 99.1793]
gi|444975462|ref|ZP_21292608.1| DNA gyrase, A subunit [Escherichia coli 99.1805]
gi|444980936|ref|ZP_21297855.1| DNA gyrase, A subunit [Escherichia coli ATCC 700728]
gi|444986286|ref|ZP_21303079.1| DNA gyrase, A subunit [Escherichia coli PA11]
gi|444991599|ref|ZP_21308255.1| DNA gyrase, A subunit [Escherichia coli PA19]
gi|444996894|ref|ZP_21313405.1| DNA gyrase, A subunit [Escherichia coli PA13]
gi|445002449|ref|ZP_21318849.1| DNA gyrase, A subunit [Escherichia coli PA2]
gi|445007948|ref|ZP_21324201.1| DNA gyrase, A subunit [Escherichia coli PA47]
gi|445012981|ref|ZP_21329099.1| DNA gyrase, A subunit [Escherichia coli PA48]
gi|445018859|ref|ZP_21334835.1| DNA gyrase, A subunit [Escherichia coli PA8]
gi|445024365|ref|ZP_21340200.1| DNA gyrase, A subunit [Escherichia coli 7.1982]
gi|445029640|ref|ZP_21345328.1| DNA gyrase, A subunit [Escherichia coli 99.1781]
gi|445035102|ref|ZP_21350644.1| DNA gyrase, A subunit [Escherichia coli 99.1762]
gi|445040727|ref|ZP_21356116.1| DNA gyrase, A subunit [Escherichia coli PA35]
gi|445045925|ref|ZP_21361189.1| DNA gyrase, A subunit [Escherichia coli 3.4880]
gi|445051496|ref|ZP_21366560.1| DNA gyrase, A subunit [Escherichia coli 95.0083]
gi|445057257|ref|ZP_21372127.1| DNA gyrase, A subunit [Escherichia coli 99.0670]
gi|450190795|ref|ZP_21890956.1| DNA gyrase subunit A [Escherichia coli SEPT362]
gi|452971978|ref|ZP_21970205.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. EC4009]
gi|13362583|dbj|BAB36537.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. Sakai]
gi|187771122|gb|EDU34966.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4196]
gi|188016049|gb|EDU54171.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4113]
gi|189002080|gb|EDU71066.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4076]
gi|189357583|gb|EDU76002.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4401]
gi|189362953|gb|EDU81372.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4486]
gi|189368282|gb|EDU86698.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4501]
gi|189372927|gb|EDU91343.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC869]
gi|189378991|gb|EDU97407.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC508]
gi|208729386|gb|EDZ78987.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4206]
gi|208735332|gb|EDZ84019.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4045]
gi|208738993|gb|EDZ86675.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4042]
gi|209157353|gb|ACI34786.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. EC4115]
gi|209765558|gb|ACI81091.1| DNA gyrase subunit A [Escherichia coli]
gi|209765560|gb|ACI81092.1| DNA gyrase subunit A [Escherichia coli]
gi|209765562|gb|ACI81093.1| DNA gyrase subunit A [Escherichia coli]
gi|209765564|gb|ACI81094.1| DNA gyrase subunit A [Escherichia coli]
gi|209765566|gb|ACI81095.1| DNA gyrase subunit A [Escherichia coli]
gi|217319233|gb|EEC27658.1| DNA gyrase, A subunit [Escherichia coli O157:H7 str. TW14588]
gi|218432858|emb|CAR13752.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
UMN026]
gi|254593522|gb|ACT72883.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
O157:H7 str. TW14359]
gi|284922222|emb|CBG35304.1| DNA gyrase subunit A [Escherichia coli 042]
gi|290763348|gb|ADD57309.1| DNA gyrase, A subunit [Escherichia coli O55:H7 str. CB9615]
gi|291427905|gb|EFF00932.1| DNA gyrase subunit A [Escherichia coli FVEC1412]
gi|291433172|gb|EFF06151.1| A subunit [Escherichia coli B185]
gi|291471062|gb|EFF13546.1| A subunit [Escherichia coli B354]
gi|298278820|gb|EFI20334.1| DNA gyrase subunit A [Escherichia coli FVEC1302]
gi|300458113|gb|EFK21606.1| DNA gyrase, A subunit [Escherichia coli MS 21-1]
gi|320192148|gb|EFW66793.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. EC1212]
gi|320641057|gb|EFX10536.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. G5101]
gi|320646446|gb|EFX15365.1| DNA gyrase subunit A [Escherichia coli O157:H- str. 493-89]
gi|320651543|gb|EFX19923.1| DNA gyrase subunit A [Escherichia coli O157:H- str. H 2687]
gi|320657295|gb|EFX25097.1| DNA gyrase subunit A [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320663122|gb|EFX30435.1| DNA gyrase subunit A [Escherichia coli O55:H7 str. USDA 5905]
gi|323168608|gb|EFZ54288.1| DNA gyrase, A subunit [Shigella sonnei 53G]
gi|326339578|gb|EGD63389.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. 1125]
gi|326344040|gb|EGD67801.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. 1044]
gi|331048514|gb|EGI20590.1| DNA gyrase, A subunit [Escherichia coli M718]
gi|331069018|gb|EGI40410.1| DNA gyrase, A subunit [Escherichia coli TA280]
gi|331078859|gb|EGI50061.1| DNA gyrase, A subunit [Escherichia coli H299]
gi|345336382|gb|EGW68818.1| DNA gyrase, A subunit [Escherichia coli STEC_C165-02]
gi|345372238|gb|EGX04202.1| DNA gyrase, A subunit [Escherichia coli STEC_MHI813]
gi|371592362|gb|EHN81270.1| DNA gyrase subunit A [Escherichia coli TA124]
gi|371601401|gb|EHN90151.1| DNA gyrase subunit A [Escherichia coli E101]
gi|373244671|gb|EHP64151.1| DNA gyrase subunit A [Escherichia coli 4_1_47FAA]
gi|374359611|gb|AEZ41318.1| DNA gyrase subunit A [Escherichia coli O55:H7 str. RM12579]
gi|377893194|gb|EHU57633.1| DNA gyrase, A subunit [Escherichia coli DEC3A]
gi|377893627|gb|EHU58061.1| DNA gyrase, A subunit [Escherichia coli DEC3B]
gi|377904563|gb|EHU68841.1| DNA gyrase, A subunit [Escherichia coli DEC3C]
gi|377909919|gb|EHU74117.1| DNA gyrase, A subunit [Escherichia coli DEC3D]
gi|377912170|gb|EHU76333.1| DNA gyrase, A subunit [Escherichia coli DEC3E]
gi|377921459|gb|EHU85458.1| DNA gyrase, A subunit [Escherichia coli DEC3F]
gi|377926062|gb|EHU89997.1| DNA gyrase, A subunit [Escherichia coli DEC4A]
gi|377930397|gb|EHU94280.1| DNA gyrase, A subunit [Escherichia coli DEC4B]
gi|377941797|gb|EHV05534.1| DNA gyrase, A subunit [Escherichia coli DEC4C]
gi|377942209|gb|EHV05945.1| DNA gyrase, A subunit [Escherichia coli DEC4D]
gi|377947278|gb|EHV10945.1| DNA gyrase, A subunit [Escherichia coli DEC4E]
gi|377957134|gb|EHV20670.1| DNA gyrase, A subunit [Escherichia coli DEC4F]
gi|377960160|gb|EHV23644.1| DNA gyrase, A subunit [Escherichia coli DEC5A]
gi|377966418|gb|EHV29829.1| DNA gyrase, A subunit [Escherichia coli DEC5B]
gi|377974840|gb|EHV38165.1| DNA gyrase, A subunit [Escherichia coli DEC5C]
gi|377975212|gb|EHV38533.1| DNA gyrase, A subunit [Escherichia coli DEC5D]
gi|377984275|gb|EHV47510.1| DNA gyrase, A subunit [Escherichia coli DEC5E]
gi|386157616|gb|EIH13956.1| DNA gyrase, A subunit [Escherichia coli 97.0259]
gi|386796903|gb|AFJ29937.1| DNA gyrase subunit A [Escherichia coli Xuzhou21]
gi|388384496|gb|EIL46225.1| DNA gyrase subunit A [Escherichia coli KD2]
gi|390641808|gb|EIN21232.1| DNA gyrase, A subunit [Escherichia coli FRIK1996]
gi|390643199|gb|EIN22562.1| DNA gyrase, A subunit [Escherichia coli FDA517]
gi|390644227|gb|EIN23520.1| DNA gyrase, A subunit [Escherichia coli FDA505]
gi|390660893|gb|EIN38583.1| DNA gyrase, A subunit [Escherichia coli 93-001]
gi|390662330|gb|EIN39934.1| DNA gyrase, A subunit [Escherichia coli FRIK1985]
gi|390664197|gb|EIN41659.1| DNA gyrase, A subunit [Escherichia coli FRIK1990]
gi|390677999|gb|EIN53999.1| DNA gyrase, A subunit [Escherichia coli PA3]
gi|390681212|gb|EIN57016.1| DNA gyrase, A subunit [Escherichia coli PA5]
gi|390683901|gb|EIN59553.1| DNA gyrase, A subunit [Escherichia coli PA9]
gi|390697122|gb|EIN71556.1| DNA gyrase, A subunit [Escherichia coli PA10]
gi|390701067|gb|EIN75322.1| DNA gyrase, A subunit [Escherichia coli PA15]
gi|390701876|gb|EIN76094.1| DNA gyrase, A subunit [Escherichia coli PA14]
gi|390714277|gb|EIN87191.1| DNA gyrase, A subunit [Escherichia coli PA22]
gi|390723064|gb|EIN95684.1| DNA gyrase, A subunit [Escherichia coli PA25]
gi|390724636|gb|EIN97185.1| DNA gyrase, A subunit [Escherichia coli PA24]
gi|390727827|gb|EIO00210.1| DNA gyrase, A subunit [Escherichia coli PA28]
gi|390743079|gb|EIO14066.1| DNA gyrase, A subunit [Escherichia coli PA31]
gi|390743375|gb|EIO14352.1| DNA gyrase, A subunit [Escherichia coli PA32]
gi|390745914|gb|EIO16694.1| DNA gyrase, A subunit [Escherichia coli PA33]
gi|390757655|gb|EIO27125.1| DNA gyrase, A subunit [Escherichia coli PA40]
gi|390767858|gb|EIO36924.1| DNA gyrase, A subunit [Escherichia coli PA41]
gi|390769516|gb|EIO38443.1| DNA gyrase, A subunit [Escherichia coli PA42]
gi|390781781|gb|EIO49458.1| DNA gyrase, A subunit [Escherichia coli TW06591]
gi|390790362|gb|EIO57790.1| DNA gyrase, A subunit [Escherichia coli TW10246]
gi|390791404|gb|EIO58795.1| DNA gyrase, A subunit [Escherichia coli TW07945]
gi|390797270|gb|EIO64526.1| DNA gyrase, A subunit [Escherichia coli TW11039]
gi|390806574|gb|EIO73477.1| DNA gyrase, A subunit [Escherichia coli TW09098]
gi|390806754|gb|EIO73656.1| DNA gyrase, A subunit [Escherichia coli TW09109]
gi|390816087|gb|EIO82599.1| DNA gyrase, A subunit [Escherichia coli TW10119]
gi|390826297|gb|EIO92153.1| DNA gyrase, A subunit [Escherichia coli EC4203]
gi|390830783|gb|EIO96278.1| DNA gyrase, A subunit [Escherichia coli TW09195]
gi|390831591|gb|EIO96959.1| DNA gyrase, A subunit [Escherichia coli EC4196]
gi|390846315|gb|EIP09919.1| DNA gyrase, A subunit [Escherichia coli TW14301]
gi|390847304|gb|EIP10852.1| DNA gyrase, A subunit [Escherichia coli TW14313]
gi|390850867|gb|EIP14208.1| DNA gyrase, A subunit [Escherichia coli EC4421]
gi|390861703|gb|EIP23947.1| DNA gyrase, A subunit [Escherichia coli EC4422]
gi|390865904|gb|EIP27898.1| DNA gyrase, A subunit [Escherichia coli EC4013]
gi|390871181|gb|EIP32623.1| DNA gyrase, A subunit [Escherichia coli EC4402]
gi|390878921|gb|EIP39731.1| DNA gyrase, A subunit [Escherichia coli EC4439]
gi|390884012|gb|EIP44401.1| DNA gyrase, A subunit [Escherichia coli EC4436]
gi|390893994|gb|EIP53528.1| DNA gyrase, A subunit [Escherichia coli EC4437]
gi|390896257|gb|EIP55648.1| DNA gyrase, A subunit [Escherichia coli EC4448]
gi|390899694|gb|EIP58930.1| DNA gyrase, A subunit [Escherichia coli EC1738]
gi|390907831|gb|EIP66672.1| DNA gyrase, A subunit [Escherichia coli EC1734]
gi|390919606|gb|EIP77955.1| DNA gyrase, A subunit [Escherichia coli EC1863]
gi|390920574|gb|EIP78842.1| DNA gyrase, A subunit [Escherichia coli EC1845]
gi|391281988|gb|EIQ40625.1| DNA gyrase, A subunit [Shigella sonnei 3226-85]
gi|391293655|gb|EIQ51914.1| DNA gyrase, A subunit [Shigella sonnei 4822-66]
gi|397899455|gb|EJL15829.1| DNA gyrase, A subunit [Shigella sonnei str. Moseley]
gi|408064134|gb|EKG98616.1| DNA gyrase, A subunit [Escherichia coli PA7]
gi|408067913|gb|EKH02341.1| DNA gyrase, A subunit [Escherichia coli FRIK920]
gi|408071207|gb|EKH05560.1| DNA gyrase, A subunit [Escherichia coli PA34]
gi|408078849|gb|EKH12977.1| DNA gyrase, A subunit [Escherichia coli FDA506]
gi|408083159|gb|EKH17077.1| DNA gyrase, A subunit [Escherichia coli FDA507]
gi|408091418|gb|EKH24649.1| DNA gyrase, A subunit [Escherichia coli FDA504]
gi|408097531|gb|EKH30422.1| DNA gyrase, A subunit [Escherichia coli FRIK1999]
gi|408104239|gb|EKH36561.1| DNA gyrase, A subunit [Escherichia coli FRIK1997]
gi|408108467|gb|EKH40470.1| DNA gyrase, A subunit [Escherichia coli NE1487]
gi|408115128|gb|EKH46594.1| DNA gyrase, A subunit [Escherichia coli NE037]
gi|408121301|gb|EKH52262.1| DNA gyrase, A subunit [Escherichia coli FRIK2001]
gi|408127710|gb|EKH58147.1| DNA gyrase, A subunit [Escherichia coli PA4]
gi|408138811|gb|EKH68467.1| DNA gyrase, A subunit [Escherichia coli PA23]
gi|408140418|gb|EKH69934.1| DNA gyrase, A subunit [Escherichia coli PA49]
gi|408146083|gb|EKH75226.1| DNA gyrase, A subunit [Escherichia coli PA45]
gi|408155440|gb|EKH83763.1| DNA gyrase, A subunit [Escherichia coli TT12B]
gi|408160097|gb|EKH88141.1| DNA gyrase, A subunit [Escherichia coli MA6]
gi|408163801|gb|EKH91648.1| DNA gyrase, A subunit [Escherichia coli 5905]
gi|408173573|gb|EKI00593.1| DNA gyrase, A subunit [Escherichia coli CB7326]
gi|408180686|gb|EKI07291.1| DNA gyrase, A subunit [Escherichia coli EC96038]
gi|408182697|gb|EKI09181.1| DNA gyrase, A subunit [Escherichia coli 5412]
gi|408218048|gb|EKI42282.1| DNA gyrase, A subunit [Escherichia coli PA38]
gi|408227689|gb|EKI51271.1| DNA gyrase, A subunit [Escherichia coli EC1735]
gi|408228578|gb|EKI52112.1| DNA gyrase, A subunit [Escherichia coli N1]
gi|408238657|gb|EKI61443.1| DNA gyrase, A subunit [Escherichia coli EC1736]
gi|408243175|gb|EKI65719.1| DNA gyrase, A subunit [Escherichia coli EC1737]
gi|408247551|gb|EKI69751.1| DNA gyrase, A subunit [Escherichia coli EC1846]
gi|408256634|gb|EKI78009.1| DNA gyrase, A subunit [Escherichia coli EC1847]
gi|408259336|gb|EKI80523.1| DNA gyrase, A subunit [Escherichia coli EC1848]
gi|408265728|gb|EKI86410.1| DNA gyrase, A subunit [Escherichia coli EC1849]
gi|408275076|gb|EKI95058.1| DNA gyrase, A subunit [Escherichia coli EC1850]
gi|408277314|gb|EKI97124.1| DNA gyrase, A subunit [Escherichia coli EC1856]
gi|408287148|gb|EKJ06044.1| DNA gyrase, A subunit [Escherichia coli EC1862]
gi|408291317|gb|EKJ09951.1| DNA gyrase, A subunit [Escherichia coli EC1864]
gi|408308374|gb|EKJ25644.1| DNA gyrase, A subunit [Escherichia coli EC1868]
gi|408308518|gb|EKJ25787.1| DNA gyrase, A subunit [Escherichia coli EC1866]
gi|408319525|gb|EKJ35661.1| DNA gyrase, A subunit [Escherichia coli EC1869]
gi|408326118|gb|EKJ41947.1| DNA gyrase, A subunit [Escherichia coli EC1870]
gi|408326926|gb|EKJ42695.1| DNA gyrase, A subunit [Escherichia coli NE098]
gi|408336826|gb|EKJ51574.1| DNA gyrase, A subunit [Escherichia coli FRIK523]
gi|408346727|gb|EKJ61013.1| DNA gyrase, A subunit [Escherichia coli 0.1304]
gi|408550203|gb|EKK27548.1| DNA gyrase, A subunit [Escherichia coli 5.2239]
gi|408550861|gb|EKK28177.1| DNA gyrase, A subunit [Escherichia coli 3.4870]
gi|408551118|gb|EKK28405.1| DNA gyrase, A subunit [Escherichia coli 6.0172]
gi|408570333|gb|EKK46313.1| DNA gyrase, A subunit [Escherichia coli 8.0586]
gi|408579932|gb|EKK55380.1| DNA gyrase, A subunit [Escherichia coli 10.0833]
gi|408581571|gb|EKK56906.1| DNA gyrase, A subunit [Escherichia coli 8.2524]
gi|408591618|gb|EKK66039.1| DNA gyrase, A subunit [Escherichia coli 10.0869]
gi|408596663|gb|EKK70788.1| DNA gyrase, A subunit [Escherichia coli 88.0221]
gi|408601457|gb|EKK75260.1| DNA gyrase, A subunit [Escherichia coli 8.0416]
gi|408612793|gb|EKK86127.1| DNA gyrase, A subunit [Escherichia coli 10.0821]
gi|427205094|gb|EKV75354.1| DNA gyrase, A subunit [Escherichia coli 88.1042]
gi|427207471|gb|EKV77640.1| DNA gyrase, A subunit [Escherichia coli 89.0511]
gi|427208703|gb|EKV78792.1| DNA gyrase, A subunit [Escherichia coli 88.1467]
gi|427222268|gb|EKV91060.1| DNA gyrase, A subunit [Escherichia coli 90.0091]
gi|427224566|gb|EKV93271.1| DNA gyrase, A subunit [Escherichia coli 90.2281]
gi|427227926|gb|EKV96410.1| DNA gyrase, A subunit [Escherichia coli 90.0039]
gi|427242332|gb|EKW09747.1| DNA gyrase, A subunit [Escherichia coli 93.0056]
gi|427242786|gb|EKW10183.1| DNA gyrase, A subunit [Escherichia coli 93.0055]
gi|427246485|gb|EKW13699.1| DNA gyrase, A subunit [Escherichia coli 94.0618]
gi|427261743|gb|EKW27660.1| DNA gyrase, A subunit [Escherichia coli 95.0183]
gi|427262305|gb|EKW28206.1| DNA gyrase, A subunit [Escherichia coli 95.0943]
gi|427265062|gb|EKW30689.1| DNA gyrase, A subunit [Escherichia coli 95.1288]
gi|427276779|gb|EKW41344.1| DNA gyrase, A subunit [Escherichia coli 96.0428]
gi|427279696|gb|EKW44107.1| DNA gyrase, A subunit [Escherichia coli 96.0427]
gi|427283462|gb|EKW47670.1| DNA gyrase, A subunit [Escherichia coli 96.0939]
gi|427292224|gb|EKW55580.1| DNA gyrase, A subunit [Escherichia coli 96.0932]
gi|427299498|gb|EKW62469.1| DNA gyrase, A subunit [Escherichia coli 96.0107]
gi|427300825|gb|EKW63750.1| DNA gyrase, A subunit [Escherichia coli 97.0003]
gi|427313441|gb|EKW75553.1| DNA gyrase, A subunit [Escherichia coli 97.1742]
gi|427316061|gb|EKW78035.1| DNA gyrase, A subunit [Escherichia coli 97.0007]
gi|427319770|gb|EKW81573.1| DNA gyrase, A subunit [Escherichia coli 99.0672]
gi|427328590|gb|EKW89952.1| DNA gyrase, A subunit [Escherichia coli 99.0678]
gi|427329511|gb|EKW90837.1| DNA gyrase, A subunit [Escherichia coli 99.0713]
gi|429254257|gb|EKY38697.1| DNA gyrase, A subunit [Escherichia coli 96.0109]
gi|429255853|gb|EKY40137.1| DNA gyrase, A subunit [Escherichia coli 97.0010]
gi|430875342|gb|ELB98884.1| DNA gyrase subunit A [Escherichia coli KTE2]
gi|430917899|gb|ELC38938.1| DNA gyrase subunit A [Escherichia coli KTE21]
gi|430924992|gb|ELC45665.1| DNA gyrase subunit A [Escherichia coli KTE26]
gi|430955717|gb|ELC74499.1| DNA gyrase subunit A [Escherichia coli KTE181]
gi|430979777|gb|ELC96542.1| DNA gyrase subunit A [Escherichia coli KTE193]
gi|430988941|gb|ELD05410.1| DNA gyrase subunit A [Escherichia coli KTE204]
gi|431050922|gb|ELD60598.1| DNA gyrase subunit A [Escherichia coli KTE228]
gi|431063266|gb|ELD72515.1| DNA gyrase subunit A [Escherichia coli KTE233]
gi|431069310|gb|ELD77639.1| DNA gyrase subunit A [Escherichia coli KTE235]
gi|431159281|gb|ELE59838.1| DNA gyrase subunit A [Escherichia coli KTE76]
gi|431170216|gb|ELE70410.1| DNA gyrase subunit A [Escherichia coli KTE80]
gi|431181613|gb|ELE81475.1| DNA gyrase subunit A [Escherichia coli KTE83]
gi|431200919|gb|ELE99637.1| DNA gyrase subunit A [Escherichia coli KTE116]
gi|431220238|gb|ELF17618.1| DNA gyrase subunit A [Escherichia coli KTE143]
gi|431263164|gb|ELF55153.1| DNA gyrase subunit A [Escherichia coli KTE9]
gi|431318353|gb|ELG06119.1| DNA gyrase subunit A [Escherichia coli KTE54]
gi|431339108|gb|ELG26170.1| DNA gyrase subunit A [Escherichia coli KTE78]
gi|431343269|gb|ELG30233.1| DNA gyrase subunit A [Escherichia coli KTE79]
gi|431364207|gb|ELG50751.1| DNA gyrase subunit A [Escherichia coli KTE115]
gi|431399858|gb|ELG83248.1| DNA gyrase subunit A [Escherichia coli KTE144]
gi|431416209|gb|ELG98696.1| DNA gyrase subunit A [Escherichia coli KTE158]
gi|431439709|gb|ELH21042.1| DNA gyrase subunit A [Escherichia coli KTE190]
gi|431531199|gb|ELI07868.1| DNA gyrase subunit A [Escherichia coli KTE105]
gi|431551072|gb|ELI25059.1| DNA gyrase subunit A [Escherichia coli KTE112]
gi|431570238|gb|ELI43164.1| DNA gyrase subunit A [Escherichia coli KTE122]
gi|431584170|gb|ELI56157.1| DNA gyrase subunit A [Escherichia coli KTE128]
gi|431677911|gb|ELJ43924.1| DNA gyrase subunit A [Escherichia coli KTE177]
gi|431701450|gb|ELJ66369.1| DNA gyrase subunit A [Escherichia coli KTE82]
gi|444538712|gb|ELV18559.1| DNA gyrase, A subunit [Escherichia coli 99.0814]
gi|444540202|gb|ELV19901.1| DNA gyrase, A subunit [Escherichia coli 09BKT078844]
gi|444547862|gb|ELV26419.1| DNA gyrase, A subunit [Escherichia coli 99.0815]
gi|444557551|gb|ELV34877.1| DNA gyrase, A subunit [Escherichia coli 99.0839]
gi|444558924|gb|ELV36185.1| DNA gyrase, A subunit [Escherichia coli 99.0816]
gi|444563895|gb|ELV40871.1| DNA gyrase, A subunit [Escherichia coli 99.0848]
gi|444569536|gb|ELV46118.1| DNA gyrase, A subunit [Escherichia coli 99.1775]
gi|444573590|gb|ELV49955.1| DNA gyrase, A subunit [Escherichia coli 99.1753]
gi|444579759|gb|ELV55736.1| DNA gyrase, A subunit [Escherichia coli 99.1793]
gi|444593731|gb|ELV68938.1| DNA gyrase, A subunit [Escherichia coli ATCC 700728]
gi|444593991|gb|ELV69195.1| DNA gyrase, A subunit [Escherichia coli PA11]
gi|444596239|gb|ELV71322.1| DNA gyrase, A subunit [Escherichia coli 99.1805]
gi|444607450|gb|ELV82028.1| DNA gyrase, A subunit [Escherichia coli PA13]
gi|444607753|gb|ELV82321.1| DNA gyrase, A subunit [Escherichia coli PA19]
gi|444616308|gb|ELV90476.1| DNA gyrase, A subunit [Escherichia coli PA2]
gi|444624212|gb|ELV98117.1| DNA gyrase, A subunit [Escherichia coli PA47]
gi|444624623|gb|ELV98505.1| DNA gyrase, A subunit [Escherichia coli PA48]
gi|444630255|gb|ELW03920.1| DNA gyrase, A subunit [Escherichia coli PA8]
gi|444639069|gb|ELW12390.1| DNA gyrase, A subunit [Escherichia coli 7.1982]
gi|444641975|gb|ELW15191.1| DNA gyrase, A subunit [Escherichia coli 99.1781]
gi|444645606|gb|ELW18668.1| DNA gyrase, A subunit [Escherichia coli 99.1762]
gi|444654802|gb|ELW27449.1| DNA gyrase, A subunit [Escherichia coli PA35]
gi|444660222|gb|ELW32595.1| DNA gyrase, A subunit [Escherichia coli 3.4880]
gi|444665097|gb|ELW37247.1| DNA gyrase, A subunit [Escherichia coli 95.0083]
gi|444670006|gb|ELW41940.1| DNA gyrase, A subunit [Escherichia coli 99.0670]
gi|449320103|gb|EMD10140.1| DNA gyrase subunit A [Escherichia coli SEPT362]
Length = 875
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 639/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|450218574|ref|ZP_21895948.1| DNA gyrase subunit A [Escherichia coli O08]
gi|449317634|gb|EMD07719.1| DNA gyrase subunit A [Escherichia coli O08]
Length = 875
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 641/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKM 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTTED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|56708601|ref|YP_170497.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110671072|ref|YP_667629.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
FSC198]
gi|254371233|ref|ZP_04987235.1| DNA gyrase [Francisella tularensis subsp. tularensis FSC033]
gi|254875466|ref|ZP_05248176.1| DNA gyrase A [Francisella tularensis subsp. tularensis MA00-2987]
gi|379717831|ref|YP_005306167.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
TIGB03]
gi|379726434|ref|YP_005318620.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
TI0902]
gi|385795295|ref|YP_005831701.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
NE061598]
gi|421756235|ref|ZP_16193158.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
80700075]
gi|56605093|emb|CAG46208.1| DNA gyrase, subunit A [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110321405|emb|CAL09591.1| DNA gyrase, subunit A [Francisella tularensis subsp. tularensis
FSC198]
gi|151569473|gb|EDN35127.1| DNA gyrase [Francisella tularensis subsp. tularensis FSC033]
gi|254841465|gb|EET19901.1| DNA gyrase A [Francisella tularensis subsp. tularensis MA00-2987]
gi|282159830|gb|ADA79221.1| DNA gyrase, subunit A [Francisella tularensis subsp. tularensis
NE061598]
gi|377827883|gb|AFB81131.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
TI0902]
gi|377829508|gb|AFB79587.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
TIGB03]
gi|409085325|gb|EKM85470.1| DNA gyrase subunit A [Francisella tularensis subsp. tularensis
80700075]
Length = 868
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/848 (55%), Positives = 625/848 (73%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIITKESSSINIEKELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ NP +I +LI+ I APDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTIALIDNPNLTIEELIEYILAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E + II+ E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKAQIIVTEIPYQVNKAKLVEKIAELVKDKKVAGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIKLIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q + Y L++ QA IL + L RLT +EQ KI+N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQVDSSYNLTEEQADAILALRLHRLTGLEQDKIVNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I +V L ILS+ K +I ++ DEL I++ YG R+SEII + ++ + EDLI
Sbjct: 480 KELIDRVKYLISILSDIKELIRVVKDELVEIRDNYGDQ----RKSEIIESRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 AEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L+ E+IT ++P+S F + YVFM+T
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLEKDERITAMMPISQ----FNEGWYVFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR G IA+ L++ D L ALTDG+ IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSKGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHHNQKIVSVIVTNPDEGIVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV +I++IT G L+RT E+R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 106/205 (51%), Gaps = 14/205 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R +GK A+ D D ++ + + + + I+ FS+ G+
Sbjct: 647 VFMATKLGRVKKVDLSEF-ARPRS-KGKIAIGLNDGDELSYVALTDGNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHHNQKIVSVI-VTN-----PDEGIVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L + DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVENDEDIVMITDNGTLVRTSSDEVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLV 746
GRSA+GV + L +K+I+L V
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKV 840
>gi|442592167|ref|ZP_21010147.1| DNA gyrase subunit A [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441608320|emb|CCP99173.1| DNA gyrase subunit A [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
Length = 875
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|388470875|ref|ZP_10145084.1| DNA gyrase, A subunit [Pseudomonas synxantha BG33R]
gi|388007572|gb|EIK68838.1| DNA gyrase, A subunit [Pseudomonas synxantha BG33R]
Length = 884
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/850 (52%), Positives = 633/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV+E+ +GR+TQGV LI +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAK 830
Query: 840 KSKLCGVQRL 849
KL G++R+
Sbjct: 831 DEKLVGLERV 840
>gi|336451294|ref|ZP_08621732.1| DNA gyrase, A subunit [Idiomarina sp. A28L]
gi|336281665|gb|EGN74937.1| DNA gyrase, A subunit [Idiomarina sp. A28L]
Length = 888
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/851 (53%), Positives = 624/851 (73%), Gaps = 15/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKEV+ I +E+E+ SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAM + N +N
Sbjct: 1 MSDLAKEVMPINIEDELKNSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMSVLGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR L DGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLADGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+++LL DLDKET+DF+ NYDG E P VLPTRIPNLL NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHQLLADLDKETVDFVPNYDGTEFIPEVLPTRIPNLLANGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++ NP+ + +L++ IP PDFPTAGI+ G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAMVDNPDIQLEELMEHIPGPDFPTAGIVSGRQGIIDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ + R II+ ELPYQVNK L+EKI+ LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARADVITDENTGRDTIIVHELPYQVNKAKLIEKIADLVKEKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+V+ELKR E E++LN LY+ TQ+Q FG NM+AL GQPKL L+E+L FI HR+E
Sbjct: 301 MRMVVELKRGESGEVMLNHLYQNTQMQVAFGFNMVALDKGQPKLFTLREMLECFITHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE AHILEGL +AL NI+ I++I+ + +P EAK ++I WNL DV
Sbjct: 361 VVTRRTVYELRKARERAHILEGLAVALANINEIIEMIKRSPSPAEAKAQLIAQGWNLGDV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G + + + + + +Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 421 SIMLERAGVDAARPDWVEPGFGVI----DGIYHLTENQAQAILDLRLHKLTGLEHEKILD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ + +L IL++S+R++E+I +EL + ++G RR+EI ++ + + ED
Sbjct: 477 EYKGLLGVIAELMHILASSERLMEVIREELVQAQAEFGDE----RRTEITNSSHDINLED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K Q + EY AQKRGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 533 LIEQEDVVVTLSHQGYVKYQSLKEYEAQKRGGKGKAATKMKDEDFIERLLVANTHDMILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GR+YW+K + +P SR +RGKPI+N+ L++ E+I ILP++N F ++ +V M
Sbjct: 593 FSSRGRVYWMKTYNLPYASRAARGKPIVNLLPLQDDERINAILPIAN----FEEDKFVIM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+++S PR SGIIA+NL++ D LIG +TDG+ +IMLFSD+GK VRF E
Sbjct: 649 ATRKGTVKKTPLADYSRPRTSGIIALNLTDGDELIGVDITDGNSEIMLFSDAGKVVRFTE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR+MGR+A GV GMR+E +QK+++LL+ + +VLT TENGYGKRT + EY +R
Sbjct: 709 DQVRSMGRTATGVRGMRIEPEQKIVSLLIPRTDEGAVLTVTENGYGKRTPLAEYPAKSRA 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
TKG++SIK ++RNG VV A V +MLI+ G L+RTRV E+ ++GR+TQGV LI
Sbjct: 769 TKGVVSIKVSERNGAVVGAMEVVPGEHLMLISNRGTLVRTRVDEVSQVGRNTQGVTLIRT 828
Query: 838 ENKSKLCGVQR 848
+ G+ R
Sbjct: 829 AADEFVVGMAR 839
>gi|170767272|ref|ZP_02901725.1| DNA gyrase, A subunit [Escherichia albertii TW07627]
gi|170123606|gb|EDS92537.1| DNA gyrase, A subunit [Escherichia albertii TW07627]
Length = 875
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/879 (52%), Positives = 639/879 (72%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A KDED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKDEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT ++EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVEEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEG 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + + + IDG A G +A V
Sbjct: 831 ENVVGLQRVAEPVDDED---LDAIDGSAAEGDDEIAPEV 866
>gi|410635051|ref|ZP_11345671.1| DNA gyrase subunit A [Glaciecola lipolytica E3]
gi|410145388|dbj|GAC12876.1| DNA gyrase subunit A [Glaciecola lipolytica E3]
Length = 895
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/876 (53%), Positives = 633/876 (72%), Gaps = 39/876 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MTDNANEILPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+DF+ NYDG E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLEKETVDFVPNYDGTEHIPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G + ++ NP+ ++ ++++ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCIALIDNPDMTVEEIMQHIPGPDFPTAALISGRKGIDDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA+ IE EN + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YMRARAEIE--TEENGKETIIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKD 298
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIV+E+KRNE E++LN LY QTQLQ FG+NM+AL N QP++ NLK+IL F+LHR+
Sbjct: 299 GMRIVVEVKRNESAEVLLNHLYAQTQLQTVFGINMVALDNNQPRVFNLKDILEAFVLHRR 358
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FEL+KAR+ AHILEGL IAL NID I +I+++ +P +AK ++ W L D
Sbjct: 359 EVVTRRTVFELKKARDRAHILEGLAIALVNIDEIIALIKASQSPSDAKASLVARGWALGD 418
Query: 420 VSKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
V++++ G + + + IS+ + Y L++ QAQ IL + L +LT +E KI+
Sbjct: 419 VAEMLARAGDDAARPDWLEPQYGISEGK----YFLTEQQAQAILDLRLHKLTGLEHDKIL 474
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
+Y+ ++ + +L ILS+S+R++E+I +EL I+++YG + RR+EI + E
Sbjct: 475 AEYKELLDIIAELLLILSSSERLMEVIREELEKIRDEYG----DARRTEITAATHDIDME 530
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLI +D+V+TLS GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD+IL
Sbjct: 531 DLIEREDVVVTLSREGYVKYQKLSDYEAQRRGGKGKSATKMKNEDFIEKLLVANTHDHIL 590
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CFS GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + YV
Sbjct: 591 CFSTRGRLYWLKVYQLPYASRNARGRPIVNILPLEENERITAILPI----QEFEEGKYVL 646
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
M+T+ G VKKT L +S PR +GIIAVNL+ D LIG +TDG DIMLFSD+GK VRFN
Sbjct: 647 MATANGTVKKTELVQYSRPRSNGIIAVNLNEGDELIGVDITDGESDIMLFSDAGKVVRFN 706
Query: 717 EN--------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLT 756
E ++R MGR+A GV G+RL+ QKV++L+V ++LT
Sbjct: 707 EKQRDSETGEVKRDPETGEELLALRPMGRTATGVRGIRLQDGQKVVSLIVPKADG-AILT 765
Query: 757 ATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIR 816
ATENG+GKRT I +Y +R T+G++SIK ++RNG VV A V EIMLI+ G L+R
Sbjct: 766 ATENGFGKRTPIADYPAKSRATQGVVSIKVSERNGAVVGAVQVFDGQEIMLISDQGTLVR 825
Query: 817 TRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
TRV E+ +GR+TQGV LI + G+Q++ +I
Sbjct: 826 TRVDEVSTVGRNTQGVRLIRTGADEHVVGLQKIEEI 861
>gi|26248619|ref|NP_754659.1| DNA gyrase subunit A [Escherichia coli CFT073]
gi|91211524|ref|YP_541510.1| DNA gyrase subunit A [Escherichia coli UTI89]
gi|117624425|ref|YP_853338.1| DNA gyrase subunit A [Escherichia coli APEC O1]
gi|215487448|ref|YP_002329879.1| DNA gyrase subunit A [Escherichia coli O127:H6 str. E2348/69]
gi|218559148|ref|YP_002392061.1| DNA gyrase subunit A [Escherichia coli S88]
gi|218690394|ref|YP_002398606.1| DNA gyrase subunit A [Escherichia coli ED1a]
gi|222156987|ref|YP_002557126.1| DNA gyrase subunit A [Escherichia coli LF82]
gi|227887288|ref|ZP_04005093.1| DNA gyrase subunit A [Escherichia coli 83972]
gi|237704706|ref|ZP_04535187.1| subunit A [Escherichia sp. 3_2_53FAA]
gi|300983263|ref|ZP_07176502.1| DNA gyrase, A subunit [Escherichia coli MS 45-1]
gi|301048980|ref|ZP_07195968.1| DNA gyrase, A subunit [Escherichia coli MS 185-1]
gi|306814656|ref|ZP_07448818.1| DNA gyrase subunit A [Escherichia coli NC101]
gi|331658310|ref|ZP_08359272.1| DNA gyrase, A subunit [Escherichia coli TA206]
gi|386600109|ref|YP_006101615.1| DNA gyrase subunit A [Escherichia coli IHE3034]
gi|386603747|ref|YP_006110047.1| DNA gyrase subunit A [Escherichia coli UM146]
gi|386630027|ref|YP_006149747.1| DNA gyrase subunit A [Escherichia coli str. 'clone D i2']
gi|386634947|ref|YP_006154666.1| DNA gyrase subunit A [Escherichia coli str. 'clone D i14']
gi|386639805|ref|YP_006106603.1| DNA gyrase [Escherichia coli ABU 83972]
gi|387617591|ref|YP_006120613.1| DNA gyrase subunit A [Escherichia coli O83:H1 str. NRG 857C]
gi|415840585|ref|ZP_11522013.1| DNA gyrase, A subunit [Escherichia coli RN587/1]
gi|416335416|ref|ZP_11672109.1| DNA gyrase subunit A [Escherichia coli WV_060327]
gi|417280366|ref|ZP_12067666.1| DNA gyrase, A subunit [Escherichia coli 3003]
gi|417286688|ref|ZP_12073977.1| DNA gyrase, A subunit [Escherichia coli TW07793]
gi|419002781|ref|ZP_13550308.1| DNA gyrase, A subunit [Escherichia coli DEC1B]
gi|419008475|ref|ZP_13555906.1| DNA gyrase, A subunit [Escherichia coli DEC1C]
gi|419014159|ref|ZP_13561509.1| DNA gyrase, A subunit [Escherichia coli DEC1D]
gi|419019158|ref|ZP_13566465.1| DNA gyrase, A subunit [Escherichia coli DEC1E]
gi|419024661|ref|ZP_13571887.1| DNA gyrase, A subunit [Escherichia coli DEC2A]
gi|419029700|ref|ZP_13576863.1| DNA gyrase, A subunit [Escherichia coli DEC2C]
gi|419040386|ref|ZP_13587414.1| DNA gyrase, A subunit [Escherichia coli DEC2E]
gi|419701066|ref|ZP_14228668.1| DNA gyrase subunit A [Escherichia coli SCI-07]
gi|419914485|ref|ZP_14432882.1| DNA gyrase subunit A [Escherichia coli KD1]
gi|419947164|ref|ZP_14463523.1| DNA gyrase subunit A [Escherichia coli HM605]
gi|422360329|ref|ZP_16440963.1| DNA gyrase, A subunit [Escherichia coli MS 110-3]
gi|422365113|ref|ZP_16445617.1| DNA gyrase, A subunit [Escherichia coli MS 153-1]
gi|422370192|ref|ZP_16450586.1| DNA gyrase, A subunit [Escherichia coli MS 16-3]
gi|422382185|ref|ZP_16462346.1| DNA gyrase, A subunit [Escherichia coli MS 57-2]
gi|422749510|ref|ZP_16803422.1| hypothetical protein ERKG_01737 [Escherichia coli H252]
gi|422755655|ref|ZP_16809479.1| hypothetical protein ERLG_02778 [Escherichia coli H263]
gi|422837715|ref|ZP_16885688.1| DNA gyrase subunit A [Escherichia coli H397]
gi|425301094|ref|ZP_18690992.1| DNA gyrase, A subunit [Escherichia coli 07798]
gi|432363308|ref|ZP_19606475.1| DNA gyrase subunit A [Escherichia coli KTE5]
gi|432381971|ref|ZP_19624914.1| DNA gyrase subunit A [Escherichia coli KTE15]
gi|432387783|ref|ZP_19630672.1| DNA gyrase subunit A [Escherichia coli KTE16]
gi|432412444|ref|ZP_19655107.1| DNA gyrase subunit A [Escherichia coli KTE39]
gi|432432519|ref|ZP_19674948.1| DNA gyrase subunit A [Escherichia coli KTE187]
gi|432436957|ref|ZP_19679345.1| DNA gyrase subunit A [Escherichia coli KTE188]
gi|432441727|ref|ZP_19684067.1| DNA gyrase subunit A [Escherichia coli KTE189]
gi|432446841|ref|ZP_19689140.1| DNA gyrase subunit A [Escherichia coli KTE191]
gi|432457339|ref|ZP_19699523.1| DNA gyrase subunit A [Escherichia coli KTE201]
gi|432466391|ref|ZP_19708479.1| DNA gyrase subunit A [Escherichia coli KTE205]
gi|432496340|ref|ZP_19738136.1| DNA gyrase subunit A [Escherichia coli KTE214]
gi|432505078|ref|ZP_19746802.1| DNA gyrase subunit A [Escherichia coli KTE220]
gi|432514533|ref|ZP_19751757.1| DNA gyrase subunit A [Escherichia coli KTE224]
gi|432524429|ref|ZP_19761557.1| DNA gyrase subunit A [Escherichia coli KTE230]
gi|432554320|ref|ZP_19791043.1| DNA gyrase subunit A [Escherichia coli KTE47]
gi|432569311|ref|ZP_19805823.1| DNA gyrase subunit A [Escherichia coli KTE53]
gi|432574310|ref|ZP_19810790.1| DNA gyrase subunit A [Escherichia coli KTE55]
gi|432584486|ref|ZP_19820880.1| DNA gyrase subunit A [Escherichia coli KTE57]
gi|432588558|ref|ZP_19824914.1| DNA gyrase subunit A [Escherichia coli KTE58]
gi|432593497|ref|ZP_19829814.1| DNA gyrase subunit A [Escherichia coli KTE60]
gi|432598217|ref|ZP_19834493.1| DNA gyrase subunit A [Escherichia coli KTE62]
gi|432608118|ref|ZP_19844303.1| DNA gyrase subunit A [Escherichia coli KTE67]
gi|432612041|ref|ZP_19848203.1| DNA gyrase subunit A [Escherichia coli KTE72]
gi|432646803|ref|ZP_19882593.1| DNA gyrase subunit A [Escherichia coli KTE86]
gi|432651804|ref|ZP_19887558.1| DNA gyrase subunit A [Escherichia coli KTE87]
gi|432656385|ref|ZP_19892089.1| DNA gyrase subunit A [Escherichia coli KTE93]
gi|432699662|ref|ZP_19934816.1| DNA gyrase subunit A [Escherichia coli KTE169]
gi|432732966|ref|ZP_19967799.1| DNA gyrase subunit A [Escherichia coli KTE45]
gi|432746274|ref|ZP_19980940.1| DNA gyrase subunit A [Escherichia coli KTE43]
gi|432755045|ref|ZP_19989595.1| DNA gyrase subunit A [Escherichia coli KTE22]
gi|432760052|ref|ZP_19994546.1| DNA gyrase subunit A [Escherichia coli KTE46]
gi|432779170|ref|ZP_20013413.1| DNA gyrase subunit A [Escherichia coli KTE59]
gi|432784197|ref|ZP_20018376.1| DNA gyrase subunit A [Escherichia coli KTE63]
gi|432802449|ref|ZP_20036428.1| DNA gyrase subunit A [Escherichia coli KTE84]
gi|432821566|ref|ZP_20055258.1| DNA gyrase subunit A [Escherichia coli KTE118]
gi|432827698|ref|ZP_20061350.1| DNA gyrase subunit A [Escherichia coli KTE123]
gi|432845201|ref|ZP_20078034.1| DNA gyrase subunit A [Escherichia coli KTE141]
gi|432899249|ref|ZP_20109941.1| DNA gyrase subunit A [Escherichia coli KTE192]
gi|432905490|ref|ZP_20114357.1| DNA gyrase subunit A [Escherichia coli KTE194]
gi|432938583|ref|ZP_20136861.1| DNA gyrase subunit A [Escherichia coli KTE183]
gi|432972434|ref|ZP_20161301.1| DNA gyrase subunit A [Escherichia coli KTE207]
gi|432974379|ref|ZP_20163218.1| DNA gyrase subunit A [Escherichia coli KTE209]
gi|432985990|ref|ZP_20174713.1| DNA gyrase subunit A [Escherichia coli KTE215]
gi|432995967|ref|ZP_20184572.1| DNA gyrase subunit A [Escherichia coli KTE218]
gi|433000554|ref|ZP_20189079.1| DNA gyrase subunit A [Escherichia coli KTE223]
gi|433005688|ref|ZP_20194117.1| DNA gyrase subunit A [Escherichia coli KTE227]
gi|433008271|ref|ZP_20196688.1| DNA gyrase subunit A [Escherichia coli KTE229]
gi|433014496|ref|ZP_20202844.1| DNA gyrase subunit A [Escherichia coli KTE104]
gi|433024114|ref|ZP_20212102.1| DNA gyrase subunit A [Escherichia coli KTE106]
gi|433029206|ref|ZP_20217065.1| DNA gyrase subunit A [Escherichia coli KTE109]
gi|433039231|ref|ZP_20226830.1| DNA gyrase subunit A [Escherichia coli KTE113]
gi|433058750|ref|ZP_20245796.1| DNA gyrase subunit A [Escherichia coli KTE124]
gi|433073431|ref|ZP_20260085.1| DNA gyrase subunit A [Escherichia coli KTE129]
gi|433083189|ref|ZP_20269646.1| DNA gyrase subunit A [Escherichia coli KTE133]
gi|433087911|ref|ZP_20274282.1| DNA gyrase subunit A [Escherichia coli KTE137]
gi|433101777|ref|ZP_20287863.1| DNA gyrase subunit A [Escherichia coli KTE145]
gi|433116165|ref|ZP_20301956.1| DNA gyrase subunit A [Escherichia coli KTE153]
gi|433125833|ref|ZP_20311392.1| DNA gyrase subunit A [Escherichia coli KTE160]
gi|433139902|ref|ZP_20325158.1| DNA gyrase subunit A [Escherichia coli KTE167]
gi|433144821|ref|ZP_20329965.1| DNA gyrase subunit A [Escherichia coli KTE168]
gi|433149819|ref|ZP_20334840.1| DNA gyrase subunit A [Escherichia coli KTE174]
gi|433154352|ref|ZP_20339294.1| DNA gyrase subunit A [Escherichia coli KTE176]
gi|433164105|ref|ZP_20348843.1| DNA gyrase subunit A [Escherichia coli KTE179]
gi|433169210|ref|ZP_20353838.1| DNA gyrase subunit A [Escherichia coli KTE180]
gi|433183903|ref|ZP_20368153.1| DNA gyrase subunit A [Escherichia coli KTE85]
gi|433189015|ref|ZP_20373113.1| DNA gyrase subunit A [Escherichia coli KTE88]
gi|433198866|ref|ZP_20382768.1| DNA gyrase subunit A [Escherichia coli KTE94]
gi|433208405|ref|ZP_20392079.1| DNA gyrase subunit A [Escherichia coli KTE97]
gi|433213142|ref|ZP_20396732.1| DNA gyrase subunit A [Escherichia coli KTE99]
gi|433323705|ref|ZP_20401036.1| DNA gyrase subunit A [Escherichia coli J96]
gi|442608008|ref|ZP_21022768.1| DNA gyrase subunit A [Escherichia coli Nissle 1917]
gi|26109024|gb|AAN81227.1|AE016763_186 DNA gyrase subunit A [Escherichia coli CFT073]
gi|91073098|gb|ABE07979.1| DNA gyrase subunit A [Escherichia coli UTI89]
gi|115513549|gb|ABJ01624.1| DNA gyrase subunit A [Escherichia coli APEC O1]
gi|215265520|emb|CAS09923.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
O127:H6 str. E2348/69]
gi|218365917|emb|CAR03659.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
S88]
gi|218427958|emb|CAR08878.2| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
ED1a]
gi|222033992|emb|CAP76733.1| DNA gyrase subunit A [Escherichia coli LF82]
gi|226901072|gb|EEH87331.1| subunit A [Escherichia sp. 3_2_53FAA]
gi|227835638|gb|EEJ46104.1| DNA gyrase subunit A [Escherichia coli 83972]
gi|294491822|gb|ADE90578.1| DNA gyrase, A subunit [Escherichia coli IHE3034]
gi|300299211|gb|EFJ55596.1| DNA gyrase, A subunit [Escherichia coli MS 185-1]
gi|300408597|gb|EFJ92135.1| DNA gyrase, A subunit [Escherichia coli MS 45-1]
gi|305852050|gb|EFM52502.1| DNA gyrase subunit A [Escherichia coli NC101]
gi|307554297|gb|ADN47072.1| DNA gyrase [Escherichia coli ABU 83972]
gi|307626231|gb|ADN70535.1| DNA gyrase subunit A [Escherichia coli UM146]
gi|312946852|gb|ADR27679.1| DNA gyrase subunit A [Escherichia coli O83:H1 str. NRG 857C]
gi|315285852|gb|EFU45292.1| DNA gyrase, A subunit [Escherichia coli MS 110-3]
gi|315292186|gb|EFU51538.1| DNA gyrase, A subunit [Escherichia coli MS 153-1]
gi|315298065|gb|EFU57334.1| DNA gyrase, A subunit [Escherichia coli MS 16-3]
gi|320196099|gb|EFW70723.1| DNA gyrase subunit A [Escherichia coli WV_060327]
gi|323188042|gb|EFZ73337.1| DNA gyrase, A subunit [Escherichia coli RN587/1]
gi|323952025|gb|EGB47899.1| hypothetical protein ERKG_01737 [Escherichia coli H252]
gi|323955999|gb|EGB51752.1| hypothetical protein ERLG_02778 [Escherichia coli H263]
gi|324006614|gb|EGB75833.1| DNA gyrase, A subunit [Escherichia coli MS 57-2]
gi|331056558|gb|EGI28567.1| DNA gyrase, A subunit [Escherichia coli TA206]
gi|355420926|gb|AER85123.1| DNA gyrase subunit A [Escherichia coli str. 'clone D i2']
gi|355425846|gb|AER90042.1| DNA gyrase subunit A [Escherichia coli str. 'clone D i14']
gi|371610624|gb|EHN99152.1| DNA gyrase subunit A [Escherichia coli H397]
gi|377843993|gb|EHU09030.1| DNA gyrase, A subunit [Escherichia coli DEC1C]
gi|377847660|gb|EHU12658.1| DNA gyrase, A subunit [Escherichia coli DEC1B]
gi|377857012|gb|EHU21867.1| DNA gyrase, A subunit [Escherichia coli DEC1D]
gi|377860212|gb|EHU25038.1| DNA gyrase, A subunit [Escherichia coli DEC1E]
gi|377863445|gb|EHU28250.1| DNA gyrase, A subunit [Escherichia coli DEC2A]
gi|377877882|gb|EHU42471.1| DNA gyrase, A subunit [Escherichia coli DEC2C]
gi|377890426|gb|EHU54883.1| DNA gyrase, A subunit [Escherichia coli DEC2E]
gi|380347812|gb|EIA36098.1| DNA gyrase subunit A [Escherichia coli SCI-07]
gi|386244695|gb|EII86425.1| DNA gyrase, A subunit [Escherichia coli 3003]
gi|386250147|gb|EII96316.1| DNA gyrase, A subunit [Escherichia coli TW07793]
gi|388386506|gb|EIL48150.1| DNA gyrase subunit A [Escherichia coli KD1]
gi|388411429|gb|EIL71608.1| DNA gyrase subunit A [Escherichia coli HM605]
gi|408213480|gb|EKI37965.1| DNA gyrase, A subunit [Escherichia coli 07798]
gi|430886527|gb|ELC09382.1| DNA gyrase subunit A [Escherichia coli KTE5]
gi|430906431|gb|ELC28031.1| DNA gyrase subunit A [Escherichia coli KTE16]
gi|430907446|gb|ELC28944.1| DNA gyrase subunit A [Escherichia coli KTE15]
gi|430934851|gb|ELC55198.1| DNA gyrase subunit A [Escherichia coli KTE39]
gi|430952944|gb|ELC71858.1| DNA gyrase subunit A [Escherichia coli KTE187]
gi|430962288|gb|ELC80145.1| DNA gyrase subunit A [Escherichia coli KTE188]
gi|430966181|gb|ELC83589.1| DNA gyrase subunit A [Escherichia coli KTE189]
gi|430973114|gb|ELC90082.1| DNA gyrase subunit A [Escherichia coli KTE191]
gi|430982073|gb|ELC98792.1| DNA gyrase subunit A [Escherichia coli KTE201]
gi|430993197|gb|ELD09551.1| DNA gyrase subunit A [Escherichia coli KTE205]
gi|431023598|gb|ELD36793.1| DNA gyrase subunit A [Escherichia coli KTE214]
gi|431038172|gb|ELD49141.1| DNA gyrase subunit A [Escherichia coli KTE220]
gi|431041929|gb|ELD52424.1| DNA gyrase subunit A [Escherichia coli KTE224]
gi|431051545|gb|ELD61208.1| DNA gyrase subunit A [Escherichia coli KTE230]
gi|431084125|gb|ELD90296.1| DNA gyrase subunit A [Escherichia coli KTE47]
gi|431100025|gb|ELE05041.1| DNA gyrase subunit A [Escherichia coli KTE53]
gi|431107908|gb|ELE12072.1| DNA gyrase subunit A [Escherichia coli KTE55]
gi|431115845|gb|ELE19339.1| DNA gyrase subunit A [Escherichia coli KTE57]
gi|431120891|gb|ELE23889.1| DNA gyrase subunit A [Escherichia coli KTE58]
gi|431127597|gb|ELE29897.1| DNA gyrase subunit A [Escherichia coli KTE60]
gi|431131084|gb|ELE33167.1| DNA gyrase subunit A [Escherichia coli KTE62]
gi|431138004|gb|ELE39844.1| DNA gyrase subunit A [Escherichia coli KTE67]
gi|431148215|gb|ELE49506.1| DNA gyrase subunit A [Escherichia coli KTE72]
gi|431180840|gb|ELE80727.1| DNA gyrase subunit A [Escherichia coli KTE86]
gi|431190251|gb|ELE89651.1| DNA gyrase subunit A [Escherichia coli KTE87]
gi|431190855|gb|ELE90241.1| DNA gyrase subunit A [Escherichia coli KTE93]
gi|431243411|gb|ELF37798.1| DNA gyrase subunit A [Escherichia coli KTE169]
gi|431276153|gb|ELF67180.1| DNA gyrase subunit A [Escherichia coli KTE45]
gi|431291313|gb|ELF81826.1| DNA gyrase subunit A [Escherichia coli KTE43]
gi|431302254|gb|ELF91442.1| DNA gyrase subunit A [Escherichia coli KTE22]
gi|431307706|gb|ELF95996.1| DNA gyrase subunit A [Escherichia coli KTE46]
gi|431327323|gb|ELG14668.1| DNA gyrase subunit A [Escherichia coli KTE59]
gi|431328620|gb|ELG15924.1| DNA gyrase subunit A [Escherichia coli KTE63]
gi|431348238|gb|ELG35096.1| DNA gyrase subunit A [Escherichia coli KTE84]
gi|431368413|gb|ELG54881.1| DNA gyrase subunit A [Escherichia coli KTE118]
gi|431372947|gb|ELG58609.1| DNA gyrase subunit A [Escherichia coli KTE123]
gi|431394623|gb|ELG78156.1| DNA gyrase subunit A [Escherichia coli KTE141]
gi|431426901|gb|ELH08945.1| DNA gyrase subunit A [Escherichia coli KTE192]
gi|431432725|gb|ELH14402.1| DNA gyrase subunit A [Escherichia coli KTE194]
gi|431463318|gb|ELH43511.1| DNA gyrase subunit A [Escherichia coli KTE183]
gi|431481936|gb|ELH61643.1| DNA gyrase subunit A [Escherichia coli KTE207]
gi|431489240|gb|ELH68868.1| DNA gyrase subunit A [Escherichia coli KTE209]
gi|431500227|gb|ELH79243.1| DNA gyrase subunit A [Escherichia coli KTE215]
gi|431505527|gb|ELH84133.1| DNA gyrase subunit A [Escherichia coli KTE218]
gi|431508540|gb|ELH86812.1| DNA gyrase subunit A [Escherichia coli KTE223]
gi|431514675|gb|ELH92516.1| DNA gyrase subunit A [Escherichia coli KTE227]
gi|431523601|gb|ELI00738.1| DNA gyrase subunit A [Escherichia coli KTE229]
gi|431530594|gb|ELI07273.1| DNA gyrase subunit A [Escherichia coli KTE104]
gi|431535807|gb|ELI12146.1| DNA gyrase subunit A [Escherichia coli KTE106]
gi|431542946|gb|ELI17942.1| DNA gyrase subunit A [Escherichia coli KTE109]
gi|431551331|gb|ELI25317.1| DNA gyrase subunit A [Escherichia coli KTE113]
gi|431569005|gb|ELI41967.1| DNA gyrase subunit A [Escherichia coli KTE124]
gi|431587705|gb|ELI59057.1| DNA gyrase subunit A [Escherichia coli KTE129]
gi|431602081|gb|ELI71590.1| DNA gyrase subunit A [Escherichia coli KTE133]
gi|431604422|gb|ELI73831.1| DNA gyrase subunit A [Escherichia coli KTE137]
gi|431619371|gb|ELI88295.1| DNA gyrase subunit A [Escherichia coli KTE145]
gi|431633927|gb|ELJ02189.1| DNA gyrase subunit A [Escherichia coli KTE153]
gi|431645067|gb|ELJ12720.1| DNA gyrase subunit A [Escherichia coli KTE160]
gi|431660215|gb|ELJ27103.1| DNA gyrase subunit A [Escherichia coli KTE167]
gi|431661516|gb|ELJ28329.1| DNA gyrase subunit A [Escherichia coli KTE168]
gi|431670488|gb|ELJ36841.1| DNA gyrase subunit A [Escherichia coli KTE174]
gi|431673895|gb|ELJ40083.1| DNA gyrase subunit A [Escherichia coli KTE176]
gi|431687410|gb|ELJ52961.1| DNA gyrase subunit A [Escherichia coli KTE179]
gi|431688062|gb|ELJ53603.1| DNA gyrase subunit A [Escherichia coli KTE180]
gi|431705721|gb|ELJ70311.1| DNA gyrase subunit A [Escherichia coli KTE88]
gi|431706153|gb|ELJ70727.1| DNA gyrase subunit A [Escherichia coli KTE85]
gi|431721570|gb|ELJ85564.1| DNA gyrase subunit A [Escherichia coli KTE94]
gi|431729690|gb|ELJ93309.1| DNA gyrase subunit A [Escherichia coli KTE97]
gi|431734167|gb|ELJ97568.1| DNA gyrase subunit A [Escherichia coli KTE99]
gi|432347803|gb|ELL42260.1| DNA gyrase subunit A [Escherichia coli J96]
gi|441710613|emb|CCQ08745.1| DNA gyrase subunit A [Escherichia coli Nissle 1917]
Length = 875
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 639/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|387886406|ref|YP_006316705.1| DNA topoisomerase [Francisella noatunensis subsp. orientalis str.
Toba 04]
gi|386871222|gb|AFJ43229.1| DNA topoisomerase (ATP-hydrolyzing) [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 864
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/848 (55%), Positives = 628/848 (74%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIPTKESSSINIEKELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID+DKET+DF NYD E P VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMQKLTHELLIDIDKETVDFSPNYDNTELVPDVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ N + +I DLI+ IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTMALIDNSQLTIEDLIQYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK I E ++ I+I E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKADIHEDEASGKSQIVITEIPYQVNKAKLVEKIAELVKDKKVTSISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIELIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + ++ +Q + Y L++ QA+ IL + L RLT +EQ KI N++
Sbjct: 421 KSMLEGVDVKMYRKETLASHYG-IQVDSSYNLTEEQAEAILALRLHRLTGLEQDKITNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I+++ L ILS+ +I ++ +EL I+ YG R+SEII++ ++ + EDLI
Sbjct: 480 KELIERIKYLIGILSDVNELIRVVKEELVEIRGNYGDE----RKSEIIVSRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 TEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L E+IT ++P+S +F + YVFMST
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLDKNERITALMPIS----EFTEGWYVFMST 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTD + IM+FSD+GKA+RF+E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDSNKQIMMFSDAGKAIRFDESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY K R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHDNQKIVSVIVTNPDEGVVLAATENGYGKRTAVSEYRKTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T++RNGKVV A LV+ +I++IT G L+RT ++R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSERNGKVVVAVLVDNDEDIVMITDNGTLVRTSSDQVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
KL ++
Sbjct: 832 NEKLISLK 839
Score = 67.8 bits (164), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 108/211 (51%), Gaps = 14/211 (6%)
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V + LG +K +SE+ A+ R GK A+ D D ++ + + +++ I+ FS+ G+
Sbjct: 647 VFMSTKLGRVKKVDLSEF-ARPRS-TGKIAIGLNDGDELSYVALTDSNKQIMMFSDAGKA 704
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
+ R++ G + L + +KI ++ ++N P V +T G
Sbjct: 705 IRFDESDVRAMGRSAAG---VTGMRLHDNQKIVSVI-VTN-----PDEGVVLAATENGYG 755
Query: 665 KKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
K+T +S + +++ G+IA++ S + ++ A L D DI++ +D+G VR + + VR
Sbjct: 756 KRTAVSEYRKTKRASQGVIAISTSERNGKVVVAVLVDNDEDIVMITDNGTLVRTSSDQVR 815
Query: 722 AMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
GRSA+GV + L +K+I+L V + +
Sbjct: 816 ECGRSAQGVRLINLRNNEKLISLKVVKQEDE 846
>gi|315633980|ref|ZP_07889269.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Aggregatibacter
segnis ATCC 33393]
gi|315477230|gb|EFU67973.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Aggregatibacter
segnis ATCC 33393]
Length = 885
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/880 (52%), Positives = 637/880 (72%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ F +++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N
Sbjct: 1 MSDFVQDITPVSIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI++ VKEKK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIAEFVKEKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRQAPNPESAKRELLARPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++++ + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 AEMLAATGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + +L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLEAIGELLYILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPIS+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPISDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR SRG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGSRGRPIVNILPLNENERITAILPVTA----YEEDKFVVMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +TDG+ +IMLFS G+ VRF+E++V
Sbjct: 651 GGIVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGNNEIMLFSSQGRVVRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLNDDESAGEIEEVSDDNTEETLDLNIDKVVSLVIPKNDGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT ++EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G
Sbjct: 771 -ILTATQNGYGKRTKLEEYPTKSRNTKGVISIKVSERNGKVVAATQVVDTDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C +
Sbjct: 830 TLVRTRVSEVSIVGRNTQGVRLIRTSENEHVVSLERICDV 869
>gi|417756493|ref|ZP_12404568.1| DNA gyrase, A subunit [Escherichia coli DEC2B]
gi|418997416|ref|ZP_13545010.1| DNA gyrase, A subunit [Escherichia coli DEC1A]
gi|377843243|gb|EHU08283.1| DNA gyrase, A subunit [Escherichia coli DEC1A]
gi|377873909|gb|EHU38540.1| DNA gyrase, A subunit [Escherichia coli DEC2B]
Length = 875
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 638/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L + IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLTEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|194427093|ref|ZP_03059644.1| DNA gyrase, A subunit [Escherichia coli B171]
gi|194414714|gb|EDX30985.1| DNA gyrase, A subunit [Escherichia coli B171]
Length = 875
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRSAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|416830636|ref|ZP_11898709.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. LSU-61]
gi|320667814|gb|EFX34722.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. LSU-61]
Length = 875
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 639/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIASFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|300897701|ref|ZP_07116099.1| DNA gyrase, A subunit [Escherichia coli MS 198-1]
gi|300358579|gb|EFJ74449.1| DNA gyrase, A subunit [Escherichia coli MS 198-1]
Length = 875
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/879 (52%), Positives = 638/879 (72%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGEGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + + + TIDG A G +A V
Sbjct: 831 ENVVGLQRVAEPVDEED---LDTIDGSAAEGDDEIAPEV 866
>gi|82777638|ref|YP_403987.1| DNA gyrase subunit A [Shigella dysenteriae Sd197]
gi|309785078|ref|ZP_07679711.1| DNA gyrase, A subunit [Shigella dysenteriae 1617]
gi|81241786|gb|ABB62496.1| DNA gyrase, subunit A [Shigella dysenteriae Sd197]
gi|308927448|gb|EFP72922.1| DNA gyrase, A subunit [Shigella dysenteriae 1617]
Length = 875
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 639/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLVYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEMEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|421778139|ref|ZP_16214722.1| DNA gyrase, A subunit [Escherichia coli AD30]
gi|408456812|gb|EKJ80620.1| DNA gyrase, A subunit [Escherichia coli AD30]
Length = 875
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 641/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|440739716|ref|ZP_20919222.1| DNA gyrase subunit A [Pseudomonas fluorescens BRIP34879]
gi|447915928|ref|YP_007396496.1| DNA gyrase subunit A [Pseudomonas poae RE*1-1-14]
gi|440379046|gb|ELQ15651.1| DNA gyrase subunit A [Pseudomonas fluorescens BRIP34879]
gi|445199791|gb|AGE25000.1| DNA gyrase subunit A [Pseudomonas poae RE*1-1-14]
Length = 884
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/850 (52%), Positives = 634/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I+ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEDRVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ D+ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVD----DYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG+ ++MLFSD GK RF E+
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGAREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV+E+ +GR+TQGV LI +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAK 830
Query: 840 KSKLCGVQRL 849
KL G++R+
Sbjct: 831 DEKLVGLERV 840
>gi|387612805|ref|YP_006115921.1| DNA gyrase subunit A [Escherichia coli ETEC H10407]
gi|309702541|emb|CBJ01868.1| DNA gyrase subunit A [Escherichia coli ETEC H10407]
Length = 875
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQ+NK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQINKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|332534567|ref|ZP_08410402.1| DNA gyrase subunit A [Pseudoalteromonas haloplanktis ANT/505]
gi|332035987|gb|EGI72466.1| DNA gyrase subunit A [Pseudoalteromonas haloplanktis ANT/505]
Length = 899
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/879 (53%), Positives = 636/879 (72%), Gaps = 38/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DL+KET+DF+ NYDG E P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEFIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++ NP+ +I +L+ IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLTEVVNGCLALIQNPDLTILELMDYIPGPDFPTAAIINGKKGIEQAYLTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRARADIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR ++ E++LN LY QTQLQ FGMNM+AL+N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGDVGEVILNNLYSQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH LEGL IAL NID I++IR + TP EAK + W L +V
Sbjct: 361 VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKIALTARPWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNI-SKLQNND-MYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ K + +++ + + S+L D Y +S+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 QGML--EKAGEDNVARPDWLASELGIRDGQYYISEQQAQAILDLRLHKLTGLEHEKILTE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +++ + +L IL+ +R++E+I DEL IK +YG RR+EI A + S EDL
Sbjct: 479 YQALLELIAELLYILATPERLMEVIRDELVEIKEQYGDE----RRTEINAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 ITEENVVVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ Y+FM+
Sbjct: 595 STAGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPV----REYAEDKYIFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE- 717
T+ G VKKT L+ +S R SGIIAVNL++ D LIG +TDGS +IMLF+D+GK VRF E
Sbjct: 651 TAFGTVKKTPLTAYSRQRASGIIAVNLNDGDSLIGVDITDGSNEIMLFTDAGKVVRFKEA 710
Query: 718 ------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR+A GV G+++ Q+V++L+V +
Sbjct: 711 EETTVVDENGNPVLDEEGNPEIRFKGVRPMGRTATGVRGIKMADDQRVVSLIVPKTDG-A 769
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LT TENGYGKRT +++Y +R T+G++SIK ++RNG VV A V+ EIM+I+ G
Sbjct: 770 ILTVTENGYGKRTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGT 829
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ +GR+TQGVILI ++ ++ G+QR+ +I
Sbjct: 830 LVRTRVNEVSTVGRNTQGVILIRTIDEEQVVGLQRIEEI 868
>gi|229589164|ref|YP_002871283.1| DNA gyrase subunit A [Pseudomonas fluorescens SBW25]
gi|229361030|emb|CAY47892.1| DNA gyrase subunit A [Pseudomonas fluorescens SBW25]
Length = 884
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/857 (51%), Positives = 638/857 (74%), Gaps = 11/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I+ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV+E+ +GR+TQGV LI +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAK 830
Query: 840 KSKLCGVQRLCKITMIK 856
KL G++R+ + + ++
Sbjct: 831 DEKLVGLERVQEPSEVE 847
>gi|402699913|ref|ZP_10847892.1| DNA gyrase subunit A [Pseudomonas fragi A22]
Length = 887
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/852 (52%), Positives = 633/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE SI++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELSIDELMQFIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + +N+ Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPDNLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ + ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDHRLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +LP+ D+ + +++FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLGEGEYITTMLPVE----DYTEGHFIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ GYGKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGYGKRTAISEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
+ L G++R+
Sbjct: 829 ASDETLVGLERV 840
>gi|119774866|ref|YP_927606.1| DNA gyrase subunit A [Shewanella amazonensis SB2B]
gi|119767366|gb|ABL99936.1| DNA gyrase subunit A [Shewanella amazonensis SB2B]
Length = 901
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/877 (52%), Positives = 627/877 (71%), Gaps = 36/877 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGSIDGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+DF+ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRMEKLAHELLADLEKETVDFVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ PE SI L++ IP PDFPTA II G + + Y TG+G+
Sbjct: 181 NIPPHNLTEVVKGCLALIEEPELSIEQLMEYIPGPDFPTAAIINGKKGIEEAYRTGRGKA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RA+ + E R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 IMRARAEV-EIEDNGRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q++FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQSSFGINMVALANGQPKLFNLKEMLEAFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKAR+ AHILE L +AL NID I +I+++++P +AK +I W L V
Sbjct: 360 VVTRRTVYELRKARDRAHILEALAVALANIDPIIALIKASASPSDAKAGLIAKGWELGTV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + +++ +Y +++ QAQ IL + L +LT +E +KI+ +YE
Sbjct: 420 KAMLEKAGDDAARPEWLEPEFGIRDG-LYFMTEPQAQAILDLRLHKLTGLEHEKILQEYE 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + L IL + +R++E+I +EL +I ++G + RR+EI +A++ S EDLI
Sbjct: 479 ELLEIIAGLLHILRSPERLMEVIKEELELILEQFGDN----RRTEINASAVDISLEDLIN 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+LGY K QP+++Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCFS+
Sbjct: 535 EEDVVVTLSHLGYAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSD 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+LYWLKV+Q+P SR +RG+PI+N+ L+ E+IT ILP+ R++ + Y+ M+TS
Sbjct: 595 FGKLYWLKVYQLPLASRQARGRPIVNLLPLQEGERITAILPV----REYEEGKYILMATS 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT L+ +S PR +GIIAVNL + D LIG +TDGS +IMLFSD+GK VRF E
Sbjct: 651 HGTVKKTALTEYSRPRSNGIIAVNLKDGDQLIGVDITDGSSEIMLFSDAGKVVRFKEGEE 710
Query: 719 -----------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVL 755
VR MGR A GV G+ LE+ Q+V++L+V + ++L
Sbjct: 711 VAVVDENGNPVLDEEGKPQINFKGVRPMGRGATGVRGIALEEGQRVVSLIVPKDD-SAIL 769
Query: 756 TATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILI 815
T T NG+GKRT + EY +R TKG++SIK +RNG VV A V EIMLI+ G L+
Sbjct: 770 TVTANGFGKRTELAEYPAKSRATKGVVSIKVTERNGPVVGAVQVGENDEIMLISDKGTLV 829
Query: 816 RTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RT + +GR+TQGV +I + + G+QR+ +I
Sbjct: 830 RTPAIGVSIIGRNTQGVTIIRTADDETVVGLQRIDEI 866
>gi|416304578|ref|ZP_11653926.1| DNA gyrase subunit A [Shigella flexneri CDC 796-83]
gi|320183333|gb|EFW58187.1| DNA gyrase subunit A [Shigella flexneri CDC 796-83]
Length = 875
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 639/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSLQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|312959698|ref|ZP_07774215.1| DNA gyrase, subunit A [Pseudomonas fluorescens WH6]
gi|311286415|gb|EFQ64979.1| DNA gyrase, subunit A [Pseudomonas fluorescens WH6]
Length = 884
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/850 (52%), Positives = 633/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV+E+ +GR+TQGV LI +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAK 830
Query: 840 KSKLCGVQRL 849
KL G++R+
Sbjct: 831 DEKLVGLERV 840
>gi|422780854|ref|ZP_16833639.1| hypothetical protein ERFG_01094 [Escherichia coli TW10509]
gi|323977572|gb|EGB72658.1| hypothetical protein ERFG_01094 [Escherichia coli TW10509]
Length = 875
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV +IDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDSIDGSAAEGDDEIAPEV 866
>gi|226943698|ref|YP_002798771.1| DNA gyrase subunit A [Azotobacter vinelandii DJ]
gi|226718625|gb|ACO77796.1| DNA gyrase, A subunit [Azotobacter vinelandii DJ]
Length = 910
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/889 (50%), Positives = 634/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDKET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++ +PE +I+ L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVIDGCLALIDDPELTIDQLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I++ ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARAEIEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++ALV+GQP+LLNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINVVALVDGQPRLLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+++ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKASPTPAEAKERLIATAWASSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VEAMVERAGADACRPEELGPQYGLRDGKYY-LSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL++ +R++E+I +EL IK ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILGQIGELIRILTSPERLLEVIREELEKIKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYQAQRRGGKGKAATGVKDEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL-------SNNKRD---- 648
+ G++YWLK ++IP+ SR SRG+P++N+ L E IT +L + N D
Sbjct: 596 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGEGITAMLQVDLEALQQQNGADDELDE 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKK L FS PRK+G+
Sbjct: 656 AEGALLEGEVVETAETEEVEGETAELVAEPTGAYIFMATAFGTVKKVPLVQFSRPRKAGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA++L D LI AA TDG+ ++MLFSD+GK +RF E VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALDLVEGDTLIAAATTDGAKEVMLFSDAGKVIRFAERVVRTMGRNARGVRGMKLGKGQR 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E GYGKRT + ++ + RG +G+I++ TN+RNG ++ A V
Sbjct: 776 LISMLIPESGAQ-ILTASERGYGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIGAVQVR 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV+LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVMLIKLARDETLVGLERV 883
>gi|419035630|ref|ZP_13582716.1| DNA gyrase, A subunit [Escherichia coli DEC2D]
gi|377879986|gb|EHU44558.1| DNA gyrase, A subunit [Escherichia coli DEC2D]
Length = 875
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 638/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANRADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|386619851|ref|YP_006139431.1| DNA gyrase subunit A [Escherichia coli NA114]
gi|432559481|ref|ZP_19796150.1| DNA gyrase subunit A [Escherichia coli KTE49]
gi|333970352|gb|AEG37157.1| DNA gyrase subunit A [Escherichia coli NA114]
gi|431090701|gb|ELD96452.1| DNA gyrase subunit A [Escherichia coli KTE49]
Length = 875
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 641/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|408482973|ref|ZP_11189192.1| DNA gyrase subunit A [Pseudomonas sp. R81]
Length = 884
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/850 (52%), Positives = 633/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV+E+ +GR+TQGV LI +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAK 830
Query: 840 KSKLCGVQRL 849
KL G++R+
Sbjct: 831 DEKLVGLERV 840
>gi|117920417|ref|YP_869609.1| DNA gyrase subunit A [Shewanella sp. ANA-3]
gi|117612749|gb|ABK48203.1| DNA gyrase subunit A [Shewanella sp. ANA-3]
Length = 918
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/879 (53%), Positives = 629/879 (71%), Gaps = 40/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+D++ NYDG E+ P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ +P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 181 NIPPHNLTEVVKGCLALIADPALSIEQLMEHIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA +E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 VMRALAEVETEDN-GRERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP +AK K++E W L V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + + +Y L++ QAQ IL++ L RLT +E KII +
Sbjct: 420 Q---GMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIAE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+I +EL I +YG + RR+ I N I+ S EDL
Sbjct: 477 YEELLEFIAGLLFILRSPERLMEVIKEELEEILAEYG----DARRTVINANEIDMSLEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K QP+S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 533 INEEDVVVTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR SRG+PI+N+ L + E+IT ILP+ R++ ++ Y+ M+
Sbjct: 593 SDFGKMYWLKVYQLPLASRTSRGRPIVNLLPLSDGERITAILPV----REYAEDKYIIMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L+ +SNPR +GIIAVNL + D LIG +T+G +IMLFS+ GK VRF E
Sbjct: 649 TSNGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEG 708
Query: 719 -------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR A GV G++LE+ Q+V++L+V +
Sbjct: 709 EEVAVLDENGNAVLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQRVVSLIVPKGDG-A 767
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LT TENGYGKRT + EY +R TKG++SIK ++RNG VV A V EIMLI+ G
Sbjct: 768 ILTVTENGYGKRTELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGT 827
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RT + + +GR+TQGV +I + K+ G+QR+ +I
Sbjct: 828 LVRTPANGVSIIGRNTQGVTIIRTASDEKVVGLQRIDEI 866
>gi|432617334|ref|ZP_19853448.1| DNA gyrase subunit A [Escherichia coli KTE75]
gi|431153754|gb|ELE54649.1| DNA gyrase subunit A [Escherichia coli KTE75]
Length = 875
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 639/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLII 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|422830079|ref|ZP_16878240.1| DNA gyrase subunit A [Escherichia coli B093]
gi|371607011|gb|EHN95595.1| DNA gyrase subunit A [Escherichia coli B093]
Length = 875
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/876 (52%), Positives = 637/876 (72%), Gaps = 23/876 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASG 871
+ G+QR+ + PV TIDG A G
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEG 858
>gi|418466076|ref|ZP_13037008.1| DNA gyrase subunit A [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359755574|gb|EHK89738.1| DNA gyrase subunit A [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 891
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/880 (52%), Positives = 634/880 (72%), Gaps = 38/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE NL+N
Sbjct: 1 MSDLVQDITPVSIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNLYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEMIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI++ VK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIAEFVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRKAPNPESAKRELLARPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ ++++ +Y L+++QAQ IL + LQ+LT++ +I+ +Y+
Sbjct: 420 ADMLAASGVDAARPEDLDEQYGIRDDGLYYLTEVQAQAILDLRLQKLTSLGHDEILGEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 480 KLLDAIGELLYILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 536 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR SRG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 596 RGRLYWLKVYQLPQASRGSRGRPIVNILPLNENERITAILPVAA----YEEDKFVVMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRFNE++V
Sbjct: 652 GGIVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFNESAV 711
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 712 RAMGRLATGVRGIKLALTNDLNDDESAVEIEDVSDDNAEETLDLNIDKVVSLVIPKNNGE 771
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G
Sbjct: 772 -ILTATQNGYGKRTKLDEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITDAG 830
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C++
Sbjct: 831 TLVRTRVSEVGIVGRNTQGVRLIRTSEAEHVVSLERICEV 870
>gi|170681961|ref|YP_001744424.1| DNA gyrase subunit A [Escherichia coli SMS-3-5]
gi|300903612|ref|ZP_07121530.1| DNA gyrase, A subunit [Escherichia coli MS 84-1]
gi|300948925|ref|ZP_07162987.1| DNA gyrase, A subunit [Escherichia coli MS 116-1]
gi|300958916|ref|ZP_07171019.1| DNA gyrase, A subunit [Escherichia coli MS 175-1]
gi|301303309|ref|ZP_07209434.1| DNA gyrase, A subunit [Escherichia coli MS 124-1]
gi|309793111|ref|ZP_07687539.1| DNA gyrase, A subunit [Escherichia coli MS 145-7]
gi|404375582|ref|ZP_10980766.1| DNA gyrase subunit A [Escherichia sp. 1_1_43]
gi|415863961|ref|ZP_11537112.1| DNA gyrase, A subunit [Escherichia coli MS 85-1]
gi|419938885|ref|ZP_14455693.1| DNA gyrase subunit A [Escherichia coli 75]
gi|422350991|ref|ZP_16431837.1| DNA gyrase, A subunit [Escherichia coli MS 117-3]
gi|432771192|ref|ZP_20005531.1| DNA gyrase subunit A [Escherichia coli KTE50]
gi|432962398|ref|ZP_20152051.1| DNA gyrase subunit A [Escherichia coli KTE202]
gi|433063692|ref|ZP_20250615.1| DNA gyrase subunit A [Escherichia coli KTE125]
gi|170519679|gb|ACB17857.1| DNA gyrase, A subunit [Escherichia coli SMS-3-5]
gi|300314419|gb|EFJ64203.1| DNA gyrase, A subunit [Escherichia coli MS 175-1]
gi|300404348|gb|EFJ87886.1| DNA gyrase, A subunit [Escherichia coli MS 84-1]
gi|300451621|gb|EFK15241.1| DNA gyrase, A subunit [Escherichia coli MS 116-1]
gi|300841483|gb|EFK69243.1| DNA gyrase, A subunit [Escherichia coli MS 124-1]
gi|308123397|gb|EFO60659.1| DNA gyrase, A subunit [Escherichia coli MS 145-7]
gi|315255166|gb|EFU35134.1| DNA gyrase, A subunit [Escherichia coli MS 85-1]
gi|324020903|gb|EGB90122.1| DNA gyrase, A subunit [Escherichia coli MS 117-3]
gi|388409263|gb|EIL69570.1| DNA gyrase subunit A [Escherichia coli 75]
gi|404291064|gb|EJZ47962.1| DNA gyrase subunit A [Escherichia sp. 1_1_43]
gi|431314889|gb|ELG02821.1| DNA gyrase subunit A [Escherichia coli KTE50]
gi|431474189|gb|ELH54011.1| DNA gyrase subunit A [Escherichia coli KTE202]
gi|431581686|gb|ELI54133.1| DNA gyrase subunit A [Escherichia coli KTE125]
Length = 875
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 641/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|114047554|ref|YP_738104.1| DNA gyrase subunit A [Shewanella sp. MR-7]
gi|113888996|gb|ABI43047.1| DNA gyrase subunit A [Shewanella sp. MR-7]
Length = 944
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/877 (53%), Positives = 628/877 (71%), Gaps = 36/877 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 27 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 86
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 87 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 146
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+D++ NYDG E+ P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 147 RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT 206
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ +P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 207 NIPPHNLTEVVKGCLALIADPALSIEQLMEHIPGPDFPTAAIINGRKGIIDAYKTGRGRA 266
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA +E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 267 VMRALAEVETEDN-GRERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDG 325
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 326 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 385
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP +AK K++E W L V
Sbjct: 386 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHV 445
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + +++ +Y L++ QAQ IL++ L RLT +E KII +YE
Sbjct: 446 QGMLEKAGDDAARPEWLEPEFGIRDG-LYYLTEQQAQAILELRLHRLTGLEHDKIIAEYE 504
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + L IL + +R++E+I +EL I +YG + RR+ I N I+ S EDLI
Sbjct: 505 ELLEFIAGLLFILRSPERLMEVIKEELEEILAEYG----DARRTVINANEIDMSLEDLIN 560
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+LGY K QP+S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCFS+
Sbjct: 561 EEDVVVTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSD 620
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G++YWLKV+Q+P SR SRG+PI+N+ L + E+IT ILP+ R++ ++ Y+ M+TS
Sbjct: 621 FGKMYWLKVYQLPLASRTSRGRPIVNLLPLSDGERITAILPV----REYAEDKYIIMATS 676
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT L+ +SNPR +GIIAVNL + D LIG +T+G +IMLFS+ GK VRF E
Sbjct: 677 NGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEGEE 736
Query: 719 -----------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVL 755
VR MGR A GV G++LE+ QKV++L+V ++L
Sbjct: 737 VAVLDENGNPVLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQKVVSLIVPKGDG-AIL 795
Query: 756 TATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILI 815
T TENGYGKRT + EY +R TKG++SIK ++RNG VV A V EIMLI+ G L+
Sbjct: 796 TVTENGYGKRTELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGTLV 855
Query: 816 RTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RT + + +GR+TQGV +I + K+ G+QR+ +I
Sbjct: 856 RTPANGVSIIGRNTQGVTIIRTASDEKVVGLQRIDEI 892
>gi|301022397|ref|ZP_07186281.1| DNA gyrase, A subunit [Escherichia coli MS 69-1]
gi|417308693|ref|ZP_12095535.1| DNA gyrase subunit A [Escherichia coli PCN033]
gi|300397547|gb|EFJ81085.1| DNA gyrase, A subunit [Escherichia coli MS 69-1]
gi|338769726|gb|EGP24504.1| DNA gyrase subunit A [Escherichia coli PCN033]
Length = 875
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|433120828|ref|ZP_20306500.1| DNA gyrase subunit A [Escherichia coli KTE157]
gi|431642429|gb|ELJ10152.1| DNA gyrase subunit A [Escherichia coli KTE157]
Length = 875
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|218700698|ref|YP_002408327.1| DNA gyrase subunit A [Escherichia coli IAI39]
gi|386624926|ref|YP_006144654.1| DNA gyrase subunit A [Escherichia coli O7:K1 str. CE10]
gi|218370684|emb|CAR18495.1| DNA gyrase (type II topoisomerase), subunit A [Escherichia coli
IAI39]
gi|349738663|gb|AEQ13369.1| DNA gyrase subunit A [Escherichia coli O7:K1 str. CE10]
Length = 875
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/884 (52%), Positives = 638/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPGATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|113970257|ref|YP_734050.1| DNA gyrase subunit A [Shewanella sp. MR-4]
gi|113884941|gb|ABI38993.1| DNA gyrase subunit A [Shewanella sp. MR-4]
Length = 946
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/879 (53%), Positives = 629/879 (71%), Gaps = 40/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 27 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 86
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAM
Sbjct: 87 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 146
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+D++ NYDG E+ P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 147 RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT 206
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ +P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 207 NIPPHNLTEVVKGCLALIADPALSIEQLMEHIPGPDFPTAAIINGRKGIIDAYKTGRGRA 266
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA +E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 267 VMRALAEVETEDN-GRERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDG 325
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 326 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 385
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L +AL NID I +I+++ TP +AK K++E W L V
Sbjct: 386 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHV 445
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ + + +Y L++ QAQ IL++ L RLT +E KII +
Sbjct: 446 Q---GMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIAE 502
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+I +EL I +YG + RR+ I N I+ S EDL
Sbjct: 503 YEELLEFIAGLLFILRSPERLMEVIKEELEEILAEYG----DARRTVINANEIDMSLEDL 558
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K QP+S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 559 INEEDVVVTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 618
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR SRG+PI+N+ L + E+IT ILP+ R++ ++ Y+ M+
Sbjct: 619 SDFGKMYWLKVYQLPLASRTSRGRPIVNLLPLSDGERITAILPV----REYAEDKYIIMA 674
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L+ +SNPR +GIIAVNL + D LIG +T+G +IMLFS+ GK VRF E
Sbjct: 675 TSNGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEG 734
Query: 719 -------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR A GV G++LE+ QKV++L+V +
Sbjct: 735 EEVSVLDENGNPVLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQKVVSLIVPKGDG-A 793
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LT TENGYGKRT + EY +R TKG++SIK ++RNG VV A V EIMLI+ G
Sbjct: 794 ILTVTENGYGKRTELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGT 853
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RT + + +GR+TQGV +I + K+ G+QR+ +I
Sbjct: 854 LVRTPANGVSIIGRNTQGVTIIRTASDEKVVGLQRIDEI 892
>gi|294140839|ref|YP_003556817.1| DNA gyrase subunit A [Shewanella violacea DSS12]
gi|293327308|dbj|BAJ02039.1| DNA gyrase, A subunit [Shewanella violacea DSS12]
Length = 905
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/872 (53%), Positives = 622/872 (71%), Gaps = 31/872 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R L+DGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYPLIDGQGNFGSVDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+DF+ NYDG E P+V+PTRIP LLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDFVPNYDGTEFIPAVMPTRIPTLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI G L ++ P SI L++ IP PDFPTA II G + D Y TG+GR
Sbjct: 181 NIPPHNMTEVIKGCLALIEEPALSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+R+K + + R II+ E+PYQVNK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 IMRSKAEV-QVEDNGRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGITGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE++ FILHR+E
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMIECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILE L IAL NID I +I+++ TP EAK K+++ W L V
Sbjct: 360 VVTRRTVFELRKARDRAHILESLAIALANIDPIIAMIKASPTPAEAKVKLVDQGWELGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + +++ +Y L+ QAQ IL + L +LT +E +KI+ +YE
Sbjct: 420 QAMLEKAGDDAARPEWLEPEYGIRDG-LYYLTQPQAQAILDLRLHKLTGLEHEKILAEYE 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+I + L IL + +R++E+I +ELN I +G RR+ I N ++ S EDLI
Sbjct: 479 ELIDIIAALLYILRSPERLLEVIKEELNEILENFGDE----RRTVINANEVDMSLEDLIN 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+LGY K QP+++Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCFS+
Sbjct: 535 EEDVVVTLSHLGYAKYQPLTDYQAQRRGGKGKSAAKVKDEDFVEKLLVANTHDTILCFSD 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G+LYWLKV+Q+P SR +RG+PI+N+ L E IT ILP+ R++ + Y+ M+TS
Sbjct: 595 FGKLYWLKVYQLPLASRQARGRPIVNLLPLSEGEHITAILPV----REYADDKYIIMATS 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT L +SNPR +GIIAVNL + D LIG +TDG DIMLFSD+GK VRFNE
Sbjct: 651 HGTVKKTALKAYSNPRANGIIAVNLKDGDELIGVDITDGKNDIMLFSDAGKVVRFNEMVR 710
Query: 719 ------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATEN 760
++R MGR+A GV G+RLE QKV++L+V + ++LT TEN
Sbjct: 711 DSETGLVKLDPETNEELVALRPMGRTATGVRGIRLEDGQKVVSLIVP-KENGAILTVTEN 769
Query: 761 GYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVS 820
GYGKRT ++EY +R TKG++SIK ++RNG VV A V EIMLI+ G L+RT +
Sbjct: 770 GYGKRTSLEEYPAKSRATKGVVSIKVSERNGAVVGAVQVGENDEIMLISDRGTLVRTPAT 829
Query: 821 EIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ +GR+TQGV +I + K+ G+QR+ +I
Sbjct: 830 GVSTIGRNTQGVTIIRIVEGEKVVGLQRIDEI 861
>gi|386594988|ref|YP_006091388.1| DNA gyrase subunit A [Escherichia coli DH1]
gi|387621940|ref|YP_006129567.1| DNA gyrase subunit A [Escherichia coli DH1]
gi|417702961|ref|ZP_12352072.1| DNA gyrase, A subunit [Shigella flexneri K-218]
gi|427809927|ref|ZP_18976992.1| DNA gyrase, subunit A, type II topoisomerase [Escherichia coli]
gi|260448677|gb|ACX39099.1| DNA gyrase, A subunit [Escherichia coli DH1]
gi|315136863|dbj|BAJ44022.1| DNA gyrase subunit A [Escherichia coli DH1]
gi|333001821|gb|EGK21387.1| DNA gyrase, A subunit [Shigella flexneri K-218]
gi|412970106|emb|CCJ44749.1| DNA gyrase, subunit A, type II topoisomerase [Escherichia coli]
Length = 875
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|395651185|ref|ZP_10439035.1| DNA gyrase subunit A [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 884
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/850 (52%), Positives = 634/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I+ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV+E+ +GR+TQGV LI +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAK 830
Query: 840 KSKLCGVQRL 849
KL G++R+
Sbjct: 831 DEKLVGLERV 840
>gi|337754806|ref|YP_004647317.1| DNA gyrase subunit A [Francisella sp. TX077308]
gi|336446411|gb|AEI35717.1| DNA gyrase subunit A [Francisella sp. TX077308]
Length = 862
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/848 (54%), Positives = 628/848 (74%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ KE SI +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N +N
Sbjct: 1 MSIPTKESSSINIEKELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNYYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDS AAM
Sbjct: 61 RPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELLID++KET+DF NYD E P VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMQKLTHELLIDIEKETVDFSPNYDNTELVPDVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEVI+G + ++ + + +I DLI+ IPAPDFPT I G + + Y TG+GRV
Sbjct: 181 NIPPHNMTEVINGTIALIDDSKLTIEDLIQYIPAPDFPTGSYINGTDGILEAYKTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK +I E ++ I++ E+PYQVNK L+EKI++LVK+KK+ IS LRDESDK G
Sbjct: 241 IMRAKAYIHEDEASGKSQIVVTEIPYQVNKAKLVEKIAELVKDKKVTGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VI+LKR+E PE+VLN LY QTQLQ +FG+NM+AL + +PKLLNLKEIL FI HRKE
Sbjct: 301 IRVVIDLKRDESPEVVLNTLYAQTQLQCSFGINMVALSDNRPKLLNLKEILEQFIKHRKE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRK++E AHILEGL ++L NID I++I+++ +P +AK ++ +WN V
Sbjct: 361 VVTRRTIFELRKSKERAHILEGLLLSLANIDEMIELIKASPSPADAKESMLARSWNGSMV 420
Query: 421 SKII-GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ G + K Y + + +Q + Y L++ QA+ IL + L RLT +EQ KI N++
Sbjct: 421 KSMLEGVDVKMYRK-ETLASYYGIQVDSSYNLTEEQAEAILALRLHRLTGLEQDKITNEF 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +I+++ L ILS+ +I ++ +EL I++ YG + R+SEII + ++ + EDLI
Sbjct: 480 KELIERIKYLIGILSDVNELIRVVKEELVEIRDNYG----DTRKSEIIESRLDLTREDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+TLS GY+K+QP+S Y AQKRGG GK A TK+ED I +L +A+THD +LCFS
Sbjct: 536 AEEDMVVTLSMDGYVKTQPLSMYNAQKRGGVGKSATKTKEEDSIFKLMLASTHDTMLCFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ GR+YW KV+ P SR S+G+PI N+ L E+IT ++P+S +F + YVFMST
Sbjct: 596 SLGRVYWSKVYDFPVASRISKGRPINNILPLDKNERITALMPIS----EFTEGWYVFMST 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
LG VKK LS F+ PR +G IA+ L++ D L ALTDGS +IM+FSD+GKA+RF E+
Sbjct: 652 KLGRVKKVDLSEFARPRSTGKIAIGLNDGDELSYVALTDGSKEIMMFSDAGKAIRFGESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGRSA GV GMRL QK+++++V+N + VL ATENGYGKRT + EY + R ++
Sbjct: 712 VRAMGRSAAGVTGMRLHADQKIVSMIVTNPDEGVVLAATENGYGKRTAVSEYRRTKRASQ 771
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I T+ RNGKVV A LV +I++IT G L+RT ++R+ GRS QGV LI + N
Sbjct: 772 GVIAISTSDRNGKVVVAVLVGNDEDIVMITDNGTLVRTSSDQVRECGRSAQGVRLINLRN 831
Query: 840 KSKLCGVQ 847
+L ++
Sbjct: 832 NERLISLK 839
>gi|409394001|ref|ZP_11245252.1| DNA gyrase subunit A [Pseudomonas sp. Chol1]
gi|409396163|ref|ZP_11247184.1| DNA gyrase subunit A [Pseudomonas sp. Chol1]
gi|409119416|gb|EKM95800.1| DNA gyrase subunit A [Pseudomonas sp. Chol1]
gi|409121428|gb|EKM97550.1| DNA gyrase subunit A [Pseudomonas sp. Chol1]
Length = 935
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/886 (50%), Positives = 631/886 (71%), Gaps = 43/886 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ELL DLDKET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + SI++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADISIDELMRYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++ALV+GQP+ LNLKE+L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALVDGQPRTLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKDALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL + L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPENLDPQYGLREGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+N R++E+I +EL +K +G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILAQIGELIRILTNPVRLMEVIREELENVKRDFG----DARRTEILESRLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLATYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL----------------- 642
+ G++YWLK ++IP+ SR SRG+P++N+ L E+IT +L +
Sbjct: 596 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAPEGDEELD 655
Query: 643 -------------------SNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAV 683
++ RD P Y+FM+T+ G VKKT L FS PR SG+IA+
Sbjct: 656 DEALVIEHDEADESESEDADDDGRDEPTGAYIFMATAKGTVKKTPLVQFSRPRTSGLIAL 715
Query: 684 NLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIA 743
L D LI AA+TDG+ ++M+FSD GK +RF E+ VR MGR+ARGV GMRL + Q++I+
Sbjct: 716 KLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLLEGQRIIS 775
Query: 744 LLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYH 803
+L+ + Q +LTA+E GYGKRT + E+ + RG +G+I++ TN+RNG +V A V
Sbjct: 776 MLIPEPEAQ-ILTASERGYGKRTAMAEFPRRGRGGQGVIAMVTNERNGPLVGAVQVLEGE 834
Query: 804 EIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERV 880
>gi|425065705|ref|ZP_18468825.1| DNA gyrase subunit A [Pasteurella multocida subsp. gallicida P1059]
gi|404384081|gb|EJZ80526.1| DNA gyrase subunit A [Pasteurella multocida subsp. gallicida P1059]
Length = 889
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/875 (52%), Positives = 630/875 (72%), Gaps = 39/875 (4%)
Query: 6 KEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVK 65
+++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N+P+ K
Sbjct: 11 QDISPISIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYNKPYRK 70
Query: 66 CARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTEC 125
AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE
Sbjct: 71 SARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDAAAAMRYTEA 130
Query: 126 RLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPH 185
R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMATNIPPH
Sbjct: 131 RMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMATNIPPH 190
Query: 186 NLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAK 245
NL EV+DG L + N E SI++L+ IP PDFPTA +I G + + Y TG+G++ +RAK
Sbjct: 191 NLGEVLDGCLAYIENNEISIDELMTYIPGPDFPTAALINGRKGIEEAYKTGRGKIYVRAK 250
Query: 246 THIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVI 305
+E + T I++ E+PYQVNK L+EKI+ LVKEKK+E IS + D SDK GMRI I
Sbjct: 251 AEVETDEKGGET-IVVHEIPYQVNKAKLIEKIADLVKEKKVEGISAITDLSDKDGMRIEI 309
Query: 306 ELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRR 365
++KR+ + E+VLN LY TQLQ TFG+N++AL GQPKLLNLK+++ F+LHR+EV+ RR
Sbjct: 310 KIKRDAVGEVVLNNLYALTQLQVTFGINIVALDKGQPKLLNLKQLIEAFVLHRREVVTRR 369
Query: 366 TIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG 425
T++ELRKARE AHILEGL IAL N+D I++IR+ P+ AK ++ W L VS+++
Sbjct: 370 TVYELRKARERAHILEGLAIALANVDPIIELIRNAPNPESAKRALLAQAWELGHVSQMLA 429
Query: 426 FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKK 485
+ + +++ MY L+++QAQ IL + LQ+LTN+ +I+++Y+ ++
Sbjct: 430 ATGVDAARPEDLEEQYGIRDG-MYYLTEVQAQAILDLRLQKLTNLGHDEILDEYKKLLDV 488
Query: 486 VIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMV 545
+ +L IL + +R++E+I +EL I+ ++ + RR+EI ++ + + EDLIA +D+V
Sbjct: 489 IGELLHILRSPERLMEVIREELEQIREQF----NDPRRTEITASSADINLEDLIAQEDVV 544
Query: 546 ITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLY 605
+TLS+ GY+K QP+++Y AQ+RGG+GK A TK+ED+I +L +ANTHD ILCFS+ GRLY
Sbjct: 545 VTLSHEGYVKYQPLTDYEAQRRGGKGKSAAKTKEEDFIERLLVANTHDTILCFSSRGRLY 604
Query: 606 WLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVK 665
WLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+ GIVK
Sbjct: 605 WLKVYQLPQASRGARGRPIVNILPLDENERITAILPVTA----YEEDKFVVMATAGGIVK 660
Query: 666 KTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGR 725
K L+ FS PR +GIIA+NL +ED LIG +TDG +IMLFS G+ VRF+EN+VRAMGR
Sbjct: 661 KIALTEFSRPRSTGIIALNLRDEDELIGVDITDGQNEIMLFSAQGRVVRFSENAVRAMGR 720
Query: 726 SARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTA 757
+A GV G++L KV++L++ N+ ++LTA
Sbjct: 721 AATGVRGIKLALTNDLSDDESAVDMEEISDENTNDALDLNIDKVVSLVIPKNEG-AILTA 779
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
T+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RT
Sbjct: 780 TQNGYGKRTELAEYPTKSRNTKGVISIKVSERNGKVVAATQVEESDQIMLITDAGTLVRT 839
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RV+EI +GR+TQGV LI L G+QR+C +
Sbjct: 840 RVNEINIIGRNTQGVRLIRTSESETLVGLQRVCDV 874
>gi|251792152|ref|YP_003006872.1| DNA gyrase subunit A [Aggregatibacter aphrophilus NJ8700]
gi|422337859|ref|ZP_16418828.1| DNA gyrase subunit A [Aggregatibacter aphrophilus F0387]
gi|247533539|gb|ACS96785.1| DNA gyrase, A subunit [Aggregatibacter aphrophilus NJ8700]
gi|353344865|gb|EHB89165.1| DNA gyrase subunit A [Aggregatibacter aphrophilus F0387]
Length = 885
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/880 (52%), Positives = 632/880 (71%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N
Sbjct: 1 MTDLVQDITPVSIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E + + R II++E+PYQVNK L+EKI++ VKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEI-ETDEKGRETIIVNEIPYQVNKAKLIEKIAEFVKEKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK ++I W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRQAPNPETAKRELIARPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 ADMLAAAGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + +L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLEAIGELLHILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR SRG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGSRGRPIVNILPLGENERITAILPVTA----YEEDKFVIMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E +V
Sbjct: 651 GGVVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSETAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L+V N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLSDDESAVEIEDVSDDNAEETLDLNIDKVVSLVVPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT ++EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G
Sbjct: 771 -ILTATQNGYGKRTKLEEYPTKSRNTKGVISIKVSERNGKVVAATQVIDTDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C +
Sbjct: 830 TLVRTRVSEVSIIGRNTQGVRLIRTSEDEHVVSLERICDV 869
>gi|15602706|ref|NP_245778.1| DNA gyrase subunit A [Pasteurella multocida subsp. multocida str.
Pm70]
gi|12721149|gb|AAK02925.1| GyrA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 899
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/875 (52%), Positives = 630/875 (72%), Gaps = 39/875 (4%)
Query: 6 KEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVK 65
+++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N+P+ K
Sbjct: 17 QDISPISIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYNKPYRK 76
Query: 66 CARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTEC 125
AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE
Sbjct: 77 SARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDAAAAMRYTEA 136
Query: 126 RLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPH 185
R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMATNIPPH
Sbjct: 137 RMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMATNIPPH 196
Query: 186 NLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAK 245
NL EV+DG L + N E SI++L+ IP PDFPTA +I G + + Y TG+G++ +RAK
Sbjct: 197 NLGEVLDGCLAYIENNEISIDELMTYIPGPDFPTAALINGRKGIEEAYKTGRGKIYVRAK 256
Query: 246 THIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVI 305
+E + T I++ E+PYQVNK L+EKI+ LVKEKK+E IS + D SDK GMRI I
Sbjct: 257 AEVETDEKGGET-IVVHEIPYQVNKAKLIEKIADLVKEKKVEGISAITDLSDKDGMRIEI 315
Query: 306 ELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRR 365
++KR+ + E+VLN LY TQLQ TFG+N++AL GQPKLLNLK+++ F+LHR+EV+ RR
Sbjct: 316 KIKRDAVGEVVLNNLYALTQLQVTFGINIVALDKGQPKLLNLKQLIEAFVLHRREVVTRR 375
Query: 366 TIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG 425
T++ELRKARE AHILEGL IAL N+D I++IR+ P+ AK ++ W L VS+++
Sbjct: 376 TVYELRKARERAHILEGLAIALANVDPIIELIRNAPNPESAKRALLAQAWELGHVSQMLA 435
Query: 426 FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKK 485
+ + +++ MY L+++QAQ IL + LQ+LTN+ +I+++Y+ ++
Sbjct: 436 ATGVDAARPEDLEEQYGIRDG-MYYLTEVQAQAILDLRLQKLTNLGHDEILDEYKKLLDV 494
Query: 486 VIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMV 545
+ +L IL + +R++E+I +EL I+ ++ + RR+EI ++ + + EDLIA +D+V
Sbjct: 495 IGELLHILRSPERLMEVIREELEQIREQF----NDPRRTEITASSADINLEDLIAQEDVV 550
Query: 546 ITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLY 605
+TLS+ GY+K QP+++Y AQ+RGG+GK A TK+ED+I +L +ANTHD ILCFS+ GRLY
Sbjct: 551 VTLSHEGYVKYQPLTDYEAQRRGGKGKSAAKTKEEDFIERLLVANTHDTILCFSSRGRLY 610
Query: 606 WLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVK 665
WLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+ GIVK
Sbjct: 611 WLKVYQLPQASRGARGRPIVNILPLDENERITAILPVTA----YEEDKFVVMATAGGIVK 666
Query: 666 KTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGR 725
K L+ FS PR +GIIA+NL +ED LIG +TDG +IMLFS G+ VRF+EN+VRAMGR
Sbjct: 667 KIALTEFSRPRSTGIIALNLRDEDELIGVDITDGQNEIMLFSAQGRVVRFSENAVRAMGR 726
Query: 726 SARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTA 757
+A GV G++L KV++L++ N+ ++LTA
Sbjct: 727 AATGVRGIKLALTNDLSDDESAVDMEEISDENTNDALDLNIDKVVSLVIPKNEG-AILTA 785
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
T+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RT
Sbjct: 786 TQNGYGKRTELAEYPTKSRNTKGVISIKVSERNGKVVAATQVEESDQIMLITDAGTLVRT 845
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RV+EI +GR+TQGV LI L G+QR+C +
Sbjct: 846 RVNEINIIGRNTQGVRLIRTSESETLVGLQRVCDV 880
>gi|432358575|ref|ZP_19601801.1| DNA gyrase subunit A [Escherichia coli KTE4]
gi|430877230|gb|ELC00686.1| DNA gyrase subunit A [Escherichia coli KTE4]
Length = 875
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 639/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|170019456|ref|YP_001724410.1| DNA gyrase subunit A [Escherichia coli ATCC 8739]
gi|169754384|gb|ACA77083.1| DNA gyrase, A subunit [Escherichia coli ATCC 8739]
Length = 875
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 639/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NI I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIAPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|421263583|ref|ZP_15714618.1| DNA gyrase subunit A [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|401689382|gb|EJS84832.1| DNA gyrase subunit A [Pasteurella multocida subsp. multocida str.
P52VAC]
Length = 893
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/875 (52%), Positives = 630/875 (72%), Gaps = 39/875 (4%)
Query: 6 KEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVK 65
+++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N+P+ K
Sbjct: 11 QDISPISIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYNKPYRK 70
Query: 66 CARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTEC 125
AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE
Sbjct: 71 SARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDAAAAMRYTEA 130
Query: 126 RLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPH 185
R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMATNIPPH
Sbjct: 131 RMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMATNIPPH 190
Query: 186 NLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAK 245
NL EV+DG L + N E SI++L+ IP PDFPTA +I G + + Y TG+G++ +RAK
Sbjct: 191 NLGEVLDGCLAYIENNEISIDELMTYIPGPDFPTAALINGRKGIEEAYKTGRGKIYVRAK 250
Query: 246 THIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVI 305
+E + T I++ E+PYQVNK L+EKI+ LVKEKK+E IS + D SDK GMRI I
Sbjct: 251 AEVETDEKGGET-IVVHEIPYQVNKAKLIEKIADLVKEKKVEGISAITDLSDKDGMRIEI 309
Query: 306 ELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRR 365
++KR+ + E+VLN LY TQLQ TFG+N++AL GQPKLLNLK+++ F+LHR+EV+ RR
Sbjct: 310 KIKRDAVGEVVLNNLYALTQLQVTFGINIVALDKGQPKLLNLKQLIEAFVLHRREVVTRR 369
Query: 366 TIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG 425
T++ELRKARE AHILEGL IAL N+D I++IR+ P+ AK ++ W L VS+++
Sbjct: 370 TVYELRKARERAHILEGLAIALANVDPIIELIRNAPNPESAKRALLAQAWELGHVSQMLA 429
Query: 426 FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKK 485
+ + +++ MY L+++QAQ IL + LQ+LTN+ +I+++Y+ ++
Sbjct: 430 ATGVDAARPEDLEEQYGIRDG-MYYLTEVQAQAILDLRLQKLTNLGHDEILDEYKKLLDV 488
Query: 486 VIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMV 545
+ +L IL + +R++E+I +EL I+ ++ + RR+EI ++ + + EDLIA +D+V
Sbjct: 489 IGELLHILRSPERLMEVIREELEQIREQF----NDPRRTEITASSADINLEDLIAQEDVV 544
Query: 546 ITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLY 605
+TLS+ GY+K QP+++Y AQ+RGG+GK A TK+ED+I +L +ANTHD ILCFS+ GRLY
Sbjct: 545 VTLSHEGYVKYQPLTDYEAQRRGGKGKSAAKTKEEDFIERLLVANTHDTILCFSSRGRLY 604
Query: 606 WLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVK 665
WLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+ GIVK
Sbjct: 605 WLKVYQLPQASRGARGRPIVNILPLDENERITAILPVTA----YEEDKFVVMATAGGIVK 660
Query: 666 KTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGR 725
K L+ FS PR +GIIA+NL +ED LIG +TDG +IMLFS G+ VRF+EN+VRAMGR
Sbjct: 661 KIALTEFSRPRSTGIIALNLRDEDELIGVDITDGQNEIMLFSAQGRVVRFSENAVRAMGR 720
Query: 726 SARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTA 757
+A GV G++L KV++L++ N+ ++LTA
Sbjct: 721 AATGVRGIKLALTNDLSDDESAVDMEEISDENTNDALDLNIDKVVSLVIPKNEG-AILTA 779
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
T+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RT
Sbjct: 780 TQNGYGKRTELAEYPTKSRNTKGVISIKVSERNGKVVAATQVEESDQIMLITDAGTLVRT 839
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RV+EI +GR+TQGV LI L G+QR+C +
Sbjct: 840 RVNEINIIGRNTQGVRLIRTSESETLVGLQRVCDV 874
>gi|417853446|ref|ZP_12498833.1| DNA gyrase subunit A [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|338219596|gb|EGP05232.1| DNA gyrase subunit A [Pasteurella multocida subsp. multocida str.
Anand1_goat]
Length = 893
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/875 (52%), Positives = 630/875 (72%), Gaps = 39/875 (4%)
Query: 6 KEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVK 65
+++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N+P+ K
Sbjct: 11 QDISPISIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYNKPYRK 70
Query: 66 CARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTEC 125
AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE
Sbjct: 71 SARIVGDVIGKYHPHGDRAVYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDAAAAMRYTEA 130
Query: 126 RLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPH 185
R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMATNIPPH
Sbjct: 131 RMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMATNIPPH 190
Query: 186 NLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAK 245
NL EV+DG L + N E SI++L+ IP PDFPTA +I G + + Y TG+G++ +RAK
Sbjct: 191 NLGEVLDGCLAYIENNEISIDELMTYIPGPDFPTAALINGRKGIEEAYKTGRGKIYVRAK 250
Query: 246 THIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVI 305
+E + T I++ E+PYQVNK L+EKI+ LVKEKK+E IS + D SDK GMRI I
Sbjct: 251 AEVETDEKGGET-IVVHEIPYQVNKAKLIEKIADLVKEKKVEGISAITDLSDKDGMRIEI 309
Query: 306 ELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRR 365
++KR+ + E+VLN LY TQLQ TFG+N++AL GQPKLLNLK+++ F+LHR+EV+ RR
Sbjct: 310 KIKRDAVGEVVLNNLYALTQLQVTFGINIVALDKGQPKLLNLKQLIEAFVLHRREVVTRR 369
Query: 366 TIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG 425
T++ELRKARE AHILEGL IAL N+D I++IR+ P+ AK ++ W L VS+++
Sbjct: 370 TVYELRKARERAHILEGLAIALANVDPIIELIRNAPNPESAKRALLAQAWELGHVSQMLA 429
Query: 426 FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKK 485
+ + +++ MY L+++QAQ IL + LQ+LTN+ +I+++Y+ ++
Sbjct: 430 ATGVDAARPEDLEEQYGIRDG-MYYLTEVQAQAILDLRLQKLTNLGHDEILDEYKKLLDV 488
Query: 486 VIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMV 545
+ +L IL + +R++E+I +EL I+ ++ + RR+EI ++ + + EDLIA +D+V
Sbjct: 489 IGELLHILRSPERLMEVIREELEQIREQF----NDPRRTEITASSADINLEDLIAQEDVV 544
Query: 546 ITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLY 605
+TLS+ GY+K QP+++Y AQ+RGG+GK A TK+ED+I +L +ANTHD ILCFS+ GRLY
Sbjct: 545 VTLSHEGYVKYQPLTDYEAQRRGGKGKSAAKTKEEDFIERLLVANTHDTILCFSSRGRLY 604
Query: 606 WLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVK 665
WLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + K+ +V M+T+ GIVK
Sbjct: 605 WLKVYQLPQASRGARGRPIVNILPLDENERITAILPVTA----YEKDKFVVMATAGGIVK 660
Query: 666 KTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGR 725
K L+ FS PR +GIIA+NL +ED LIG +TDG +IMLFS G+ VRF+EN+VRAMGR
Sbjct: 661 KIALTEFSRPRSTGIIALNLRDEDELIGVDITDGQNEIMLFSAQGRVVRFSENAVRAMGR 720
Query: 726 SARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTA 757
+A GV G++L KV++L++ N+ ++LTA
Sbjct: 721 AATGVRGIKLALTNDLSDDESAVDMEEISDENTNDALDLNIDKVVSLVIPKNEG-AILTA 779
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
T+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RT
Sbjct: 780 TQNGYGKRTELAEYPTKSRNTKGVISIKVSERNGKVVAATQVEESDQIMLITDAGTLVRT 839
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RV+EI +GR+TQGV LI L G+QR+C +
Sbjct: 840 RVNEINIIGRNTQGVRLIRTSENETLVGLQRVCDV 874
>gi|432788117|ref|ZP_20022249.1| DNA gyrase subunit A [Escherichia coli KTE65]
gi|431337834|gb|ELG24922.1| DNA gyrase subunit A [Escherichia coli KTE65]
Length = 875
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 638/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYGTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|145298929|ref|YP_001141770.1| DNA gyrase [Aeromonas salmonicida subsp. salmonicida A449]
gi|418361082|ref|ZP_12961739.1| DNA gyrase subunit A [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142851701|gb|ABO90022.1| DNA gyrase [Aeromonas salmonicida subsp. salmonicida A449]
gi|356687667|gb|EHI52247.1| DNA gyrase subunit A [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 934
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/935 (51%), Positives = 643/935 (68%), Gaps = 66/935 (7%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MSDLAREITPINIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRLAQDFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N +I++L+ I PDFPT II G + + Y TG+G V
Sbjct: 181 NIPPHNLTEIVNGCLALIENGNLTIDELMTYITGPDFPTGAIINGRAGIVQAYRTGRGSV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E ++ +R II+ ELPYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVEVDDKTSRETIIVHELPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E EIVLN LYK TQLQ TFG+NM+AL N QPK++NLK+IL F+LHR+E
Sbjct: 301 MRIVIEIKRGESGEIVLNNLYKHTQLQTTFGINMVALDNNQPKVMNLKDILDAFLLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL +AL NID I++IR + TP +AK K++ W L +V
Sbjct: 361 VVTRRTVFELRKARDRAHILEGLAVALANIDPIIELIRHSDTPADAKAKLVARGWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Q Y L++ QAQ IL + L +LT +E KI+
Sbjct: 421 AAMLEKAGDDAARPEWLEPEFGIREGQ----YFLTEQQAQAILDLRLHKLTGLEHGKILE 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y++++ + +L IL++ +R++E+I DEL ++ +YG RR+EI ++ + ED
Sbjct: 477 EYQSLLDLIAELLFILASPERLMEVIRDELLAVREQYGDE----RRTEISASSAEINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QPI++Y AQ+RGGRGK A K+ED++ +L +ANTHD ILC
Sbjct: 533 LITPEDVVVTLSHQGYVKYQPITDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G++YWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ +++ + YVF
Sbjct: 593 FSTRGKVYWLKVYQLPEASRGARGRPIINLLPLEEGERITAILPV----KEYADDKYVFF 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRFNE
Sbjct: 649 ATADGTVKKTSLSAFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFNE 708
Query: 718 N------------------------------------------------SVRAMGRSARG 729
VR MGR+A G
Sbjct: 709 GSGRADAADADVSDDVDGDDESVIDAGNDDDGSDNGEGSESTESKGTFKGVRPMGRTAGG 768
Query: 730 VIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKR 789
V G+RL KV++L+V + ++LTATENGYGKRT + EY +RGT+G+ SIK ++R
Sbjct: 769 VRGIRLLNGDKVVSLIVPRGEG-AILTATENGYGKRTALTEYPTKSRGTQGVRSIKVDER 827
Query: 790 NGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
NGKV+ A V+ +IMLIT GG L+RTRVSE+ +GR+T GV LI + G+QR+
Sbjct: 828 NGKVIDAIQVDDTDQIMLITNGGTLVRTRVSEVSIIGRNTGGVRLIRTGEDETVVGLQRI 887
Query: 850 CKITMIKKYIPVITIDGPTASGKGTVAQLVASKLG 884
+ ++ V+ IDG + G T ++ G
Sbjct: 888 AESD--EEENDVMAIDGEVSEGTDTAPDAGSAAAG 920
>gi|90412222|ref|ZP_01220228.1| putative DNA topoisomerase (ATP-hydrolyzing) [Photobacterium
profundum 3TCK]
gi|90326946|gb|EAS43331.1| putative DNA topoisomerase (ATP-hydrolyzing) [Photobacterium
profundum 3TCK]
Length = 892
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/859 (54%), Positives = 623/859 (72%), Gaps = 24/859 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E P+V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLDKETVDYVPNYDGTEFIPAVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + N + ++ L+ IP PDFPTA +I G + D Y+TG+G+V
Sbjct: 181 NIPPHNLGEVINGCLAFIDNEDITVEQLMDYIPGPDFPTAALINGRKGIIDAYHTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRAKASI-EVEKNGRETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E KR+ + E++LN LY QTQLQ TFG+NM+AL +GQPKL +LKE+L F+ HR+E
Sbjct: 300 MRIVVECKRDAVGEVILNNLYSQTQLQTTFGINMVALDHGQPKLFSLKEMLKCFVNHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE AH+LEGL IAL NID I++I+S TPQ A+ +++ W L DV
Sbjct: 360 VVTRRTIYELRKARERAHLLEGLAIALVNIDEIIELIKSAPTPQVAREELLARPWQLGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL++ L RLT +E +KI+
Sbjct: 420 AAMLERAGVDAARPEWLEPQFGIHGGQ----YFLTEPQAQAILELRLHRLTGLEHEKILE 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ + +L IL + +R++E+I DEL +K ++ RR+EI + + ED
Sbjct: 476 EYKGLLDVIEELLLILGSPERLMEVIRDELYAVKEQFNDE----RRTEITAASHDIDLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LITQEDVVVTLSHEGYVKYQILSDYEAQRRGGKGKIATRMKDEDFIERLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GR+YWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ + YVFM
Sbjct: 592 FSSRGRMYWLKVYQLPLASRTARGKPIVNILPLEEDERITAILPV----REYEADKYVFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L++FS PR +GIIAVNL D LIG +T+ + DIMLFS GK VRF E
Sbjct: 648 ATADGTVKKTPLTDFSRPRSAGIIAVNLREGDSLIGVDITNSTDDIMLFSKFGKVVRFYE 707
Query: 718 NS-------VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKE 770
++ VR MGR+A GV GM+L + KV++L+V +N+ VLT TENGYGKRT + E
Sbjct: 708 SADENGKGGVRGMGRTAAGVRGMKLAEGDKVVSLIVPHNEG-DVLTVTENGYGKRTALTE 766
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
Y +R T+G++SIK + RNG VV A E M+IT GG L+RTRV+E+ ++GR+TQ
Sbjct: 767 YPAKSRATQGVVSIKVSDRNGSVVGAVQAEDGDEFMMITNGGTLVRTRVAEVSRVGRNTQ 826
Query: 831 GVILITVENKSKLCGVQRL 849
GV LI + + G+QR+
Sbjct: 827 GVTLIRTAEEELVVGLQRI 845
>gi|110806200|ref|YP_689720.1| DNA gyrase subunit A [Shigella flexneri 5 str. 8401]
gi|110615748|gb|ABF04415.1| DNA gyrase subunit A [Shigella flexneri 5 str. 8401]
Length = 875
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 638/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTECEEGVK----VFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|415881576|ref|ZP_11545455.1| DNA gyrase, A subunit, partial [Escherichia coli MS 79-10]
gi|342926117|gb|EGU94839.1| DNA gyrase, A subunit [Escherichia coli MS 79-10]
Length = 874
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++Y +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYYTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|443474261|ref|ZP_21064281.1| DNA gyrase subunit A [Pseudomonas pseudoalcaligenes KF707]
gi|442905268|gb|ELS30110.1| DNA gyrase subunit A [Pseudomonas pseudoalcaligenes KF707]
Length = 924
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/890 (50%), Positives = 631/890 (70%), Gaps = 47/890 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDKET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +++DL+K IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPELTVDDLMKYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ + R II+ ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARAEIEDMEKGGGRQQIIVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQ+Q+ FG+N +ALV+GQP+ +NLK++L FI HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQMQSVFGINAVALVDGQPRTMNLKDMLEVFIRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I++I+++ TP EAK ++I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIELIKASPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N +R++E+I +EL +K ++G + RRSEI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPERLMEVIREELEKVKAEFG----DARRSEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAVYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL-------SNNKRDF--- 649
+ G++YWL+ ++IP+ SR +RG+P++N+ L + E+IT +L + S + D
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDDGERITAMLQIDLEALQQSGGEEDLEEA 655
Query: 650 ------------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSG 679
P Y+FM+T+ G VKKT L FS PR +G
Sbjct: 656 DGAVIEGELVEPEAVTESVEDGETELADDEPTGAYIFMATAFGTVKKTPLVQFSRPRSAG 715
Query: 680 IIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQ 739
+IA+ L D LI AA+TDG+ ++MLFSD GK +RF E VR MGR+ARGV GMRL + Q
Sbjct: 716 LIALKLEEGDTLIAAAITDGAKEVMLFSDGGKVIRFKEKLVRIMGRNARGVRGMRLPEGQ 775
Query: 740 KVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLV 799
++I++L+ Q +LTA+E GYGKRT + E+ + RG +G+I++ +N+RNGK+V A V
Sbjct: 776 RLISMLIPEAGAQ-ILTASERGYGKRTRLGEFPRRGRGGQGVIAMVSNERNGKLVGAVQV 834
Query: 800 NRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + L G++R+
Sbjct: 835 QDGEEIMLISDQGTLVRTRVDEVSSSGRNTQGVTLIKLAKDETLVGLERV 884
>gi|416892456|ref|ZP_11923794.1| DNA gyrase A [Aggregatibacter aphrophilus ATCC 33389]
gi|347814735|gb|EGY31383.1| DNA gyrase A [Aggregatibacter aphrophilus ATCC 33389]
Length = 885
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/880 (52%), Positives = 632/880 (71%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N
Sbjct: 1 MTDLVQDITPVSIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E + + R II++E+PYQVNK L+EKI++ VKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEI-ETDEKGRETIIVNEIPYQVNKAKLIEKIAEFVKEKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK ++I W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRQAPNPETAKRELIARPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 ADMLATAGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ + +L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLEAIGELLRILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR SRG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGSRGRPIVNILPLGENERITAILPVTA----YEEDKFVIMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E +V
Sbjct: 651 GGVVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSETAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L+V N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLSDDESAVEIEDVSDDNAEETLDLNIDKVVSLVVPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT ++EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G
Sbjct: 771 -ILTATQNGYGKRTKLEEYPTKSRNTKGVISIKVSERNGKVVAATQVIDTDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C +
Sbjct: 830 TLVRTRVSEVSIVGRNTQGVRLIRTSEDEHVVSLERICDV 869
>gi|127512877|ref|YP_001094074.1| DNA gyrase subunit A [Shewanella loihica PV-4]
gi|126638172|gb|ABO23815.1| DNA gyrase subunit A [Shewanella loihica PV-4]
Length = 879
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/854 (54%), Positives = 627/854 (73%), Gaps = 15/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R TLVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYTLVDGQGNFGSVDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K++++LL DL+KET+D++ NYDG E+ P+VLPTRIP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI G L ++ P SI L++ IP PDFPTA I+ G + D Y TG+G+
Sbjct: 181 NIPPHNLSEVISGCLALIDEPSLSIEQLMEHIPGPDFPTAAIVNGRKGIEDAYKTGRGKA 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ +E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 VMRARATVETEDN-GRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR E+ E++LN LY QTQLQ +FG+NM+AL NGQPKL NLKE+L FILHR+E
Sbjct: 300 MRIVIEVKRGEVGEVILNNLYAQTQLQTSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILE L IAL NID I +I+++ TP EAK K++ W L +V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAIALANIDPIIALIKASPTPAEAKTKLVSQGWALGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
G +K + ++ +S + +Y L++ QAQ IL + L +LT +E +KI+++
Sbjct: 420 Q---GMLEKAGDDAARPEWLSAEFGIRDGLYYLTEQQAQAILDLRLHKLTGLEHEKILSE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
YE +++ + L IL + +R++E+I +EL + +G RR+E+ +A++ S EDL
Sbjct: 477 YEELLELIAALLYILRSPERLMEVIKEELQEVLEVFGDE----RRTELNASAVDISLEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+LGY K QP+S+Y+AQ+RGG+GK A KDED++ +L +ANTHD ILCF
Sbjct: 533 INEEDVVVTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S++G++YWLKV+Q+P SR +RG+PIIN+ L E+IT ILP+ R++ + YV M+
Sbjct: 593 SDFGKMYWLKVYQLPLASRQARGRPIINLLPLAEGERITAILPV----REYDADKYVIMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L +S PR +GIIAVNL + D LIG +T+G ++MLFS+ GK VRF+E+
Sbjct: 649 TSHGTVKKTSLDQYSRPRANGIIAVNLKDGDQLIGVDITNGDNEVMLFSNEGKVVRFSED 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+A GV G++LE Q V++L+V N ++LT TENGYGKRT + EY +R T
Sbjct: 709 QVRGMGRTATGVRGIKLEDGQSVVSLIVPKNDG-AILTVTENGYGKRTELDEYPAKSRAT 767
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG++SIK ++RNG VV A V EIMLI+ G L+RT S + +GR+TQGV +I
Sbjct: 768 KGVVSIKVSERNGAVVGAVQVLENDEIMLISDKGTLVRTPASGVSTIGRNTQGVTIIRTA 827
Query: 839 NKSKLCGVQRLCKI 852
+ G+QR+ +I
Sbjct: 828 TDETVVGLQRIDEI 841
>gi|406915510|gb|EKD54585.1| hypothetical protein ACD_60C00067G0003 [uncultured bacterium]
Length = 843
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/850 (53%), Positives = 625/850 (73%), Gaps = 20/850 (2%)
Query: 4 FAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPF 63
AKE+ + LE+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+ N WN+
Sbjct: 5 IAKEIQKVSLEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGNDWNKAH 64
Query: 64 VKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYT 123
K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD AAAMRYT
Sbjct: 65 KKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYLLVDGQGNFGSIDGDEAAAMRYT 124
Query: 124 ECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIP 183
E R++++++ LL DL+K T+DF+ NYD E P VLP ++PNLLINGSSGIAVGMATNIP
Sbjct: 125 EVRMSRMAHALLADLEKNTVDFVPNYDESETSPVVLPAQLPNLLINGSSGIAVGMATNIP 184
Query: 184 PHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIR 243
PHNLTEV++ + ++ N + +I ++++ IP PDFPTA I+G + +H Y TG+GR+ +R
Sbjct: 185 PHNLTEVVNACIAMIDNSDITIEEIMRHIPGPDFPTAATIHGRAGIHLAYRTGRGRISVR 244
Query: 244 AKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRI 303
AKT IE + + I++ ELPYQ+NK L+E+I++LVKEKKLE I+ LRDESDK GMR+
Sbjct: 245 AKTQIETDEKSGKEKIVVTELPYQINKARLVERIAELVKEKKLEGITALRDESDKQGMRV 304
Query: 304 VIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIK 363
VIEL+R E +++LN L+ TQLQ+ +GMNM+AL++GQPK+LN+K+IL F+ HR+EV+
Sbjct: 305 VIELRRGENSDVILNNLFVHTQLQSVYGMNMVALLDGQPKVLNIKQILEAFLRHRREVVT 364
Query: 364 RRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKI 423
RRTIF+L KARE AHILEGL IAL NID I +I+ P +AK +++ W+ DV I
Sbjct: 365 RRTIFDLHKARERAHILEGLAIALANIDEVIALIKKAKDPADAKTQLLSRAWHPADVITI 424
Query: 424 IGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENV 482
+S+I+ + D Y S Q Q IL M L RLT +EQ KI+++++ +
Sbjct: 425 ----------LSRISEGAPYGLAQDGYHFSPEQVQSILDMRLHRLTGLEQNKILSEHKEL 474
Query: 483 IKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQ 542
++DL DIL NSKR++++I DEL I+ ++G RR++II N + EDL+ +
Sbjct: 475 QLLIVDLNDILINSKRLMQVIRDELLSIQQQFGDE----RRTQIIENEGDFCLEDLLPEE 530
Query: 543 DMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYG 602
D+V+TLS+ GY KSQP++ Y+AQ RGG+GK A K+ED+I ++ +AN+HD ILCFSN+G
Sbjct: 531 DVVVTLSHEGYAKSQPVALYQAQHRGGKGKSATNVKEEDFIERVLVANSHDTILCFSNHG 590
Query: 603 RLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLG 662
++YWLKV+Q+PQ SRNSRGKPI+N+ L EKI ILP+ RD+ K+ +VFM+T+ G
Sbjct: 591 KVYWLKVYQLPQASRNSRGKPIVNLLPLAEGEKINAILPV----RDYRKDQFVFMATAKG 646
Query: 663 IVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRA 722
VKK L+ FS PR +GIIA+ L++ D LIG +T+G ++MLF+++GK + F+E VR+
Sbjct: 647 TVKKVALTEFSRPRSNGIIALELADNDKLIGVDITNGQQEVMLFTNAGKVILFSEEDVRS 706
Query: 723 MGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGII 782
MGR+ARGV G++L+K+Q VI+L+V + +LTAT+NGYGKRT I+EY RG +G+I
Sbjct: 707 MGRTARGVRGVKLQKEQYVISLIVV-HPNGDILTATKNGYGKRTAIEEYRSTGRGGQGVI 765
Query: 783 SIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSK 842
SI+ +RNG V+AAT VN E+MLI+ G L+R V+EI +GR+TQGV LI + N
Sbjct: 766 SIQVTERNGDVIAATQVNPVDEVMLISNKGTLVRVPVAEISLVGRNTQGVRLINLVNDEL 825
Query: 843 LCGVQRLCKI 852
L G++R+ +
Sbjct: 826 LVGLERIATL 835
>gi|121884|sp|P14829.1|GYRA_KLEOX RecName: Full=DNA gyrase subunit A
gi|43808|emb|CAA34724.1| unnamed protein product [Klebsiella pneumoniae]
Length = 876
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/878 (52%), Positives = 637/878 (72%), Gaps = 18/878 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGS GIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSFGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + E SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGRLAYVEDEEISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I A+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YICARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + +VLN LY QTQLQ +FG+NM+AL +GQPK++NLKEI+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGRVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI LRKAR+ A ILE L+IAL NID I++IR TP EAK +I +W+L +V
Sbjct: 361 VVTRRTILALRKARDRADILEALSIALANIDPIIELIRRAPTPAEAKAGLIARSWDLGNV 420
Query: 421 SKII--GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S ++ G + + + Q Y L++ QAQ IL + LQ+LT +E +K++++
Sbjct: 421 SAMLEAGDDAARPEWLEPEFGVRDGQ----YYLTEQQAQAILDLRLQKLTGLEHEKLLDE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +++++ +L IL ++ R++E+I +EL +++ ++G + RR++I N+++ + EDL
Sbjct: 477 YKELLEQIAELLHILGSADRLMEVIREELELVREQFG----DARRTDITANSVDINIEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCF
Sbjct: 533 ITQEDVVVTLSHEGYVKYQPVNDYEAQRRGGKGKSAPRIKEEDFIDRLLVANTHDTILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+ T ILP+ R++ + VFM+
Sbjct: 593 SSRGRLYWMKVYQVPEASRGARGRPIVNLLPLEANERYTAILPV----REYEEGVNVFMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT FS PR +GIIAVNL+ D LIG LT G ++MLFS +GK VRF E+
Sbjct: 649 TASGTVKKTPADEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKED 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VRAMGR+A GV G++L + KV++L+V + + +LTATENGY KRT + EY +R T
Sbjct: 709 DVRAMGRTATGVRGIKLAGEDKVVSLIVPRGEGR-ILTATENGYRKRTAVAEYPTKSRAT 767
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+ISIK +RNG VV A V+ +IM+IT G L+R RVSE+ +GR+TQGVILI
Sbjct: 768 QGVISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRIRVSEVSIVGRNTQGVILIRTA 827
Query: 839 NKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
+ +QR+ + ++ + IDG A G +A
Sbjct: 828 EDENVVALQRVAEPVDDEE---LDAIDGSAAEGDEDIA 862
>gi|300818170|ref|ZP_07098382.1| DNA gyrase, A subunit [Escherichia coli MS 107-1]
gi|300529314|gb|EFK50376.1| DNA gyrase, A subunit [Escherichia coli MS 107-1]
Length = 875
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 640/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++Y +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDLAVYYTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 866
>gi|85059560|ref|YP_455262.1| DNA gyrase subunit A [Sodalis glossinidius str. 'morsitans']
gi|84780080|dbj|BAE74857.1| DNA gyrase subunit A [Sodalis glossinidius str. 'morsitans']
Length = 886
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/847 (53%), Positives = 620/847 (73%), Gaps = 10/847 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAREITPVNIEEELKRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET+D++ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLEKETVDYVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E+IDG L + + S+ L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLAEIIDGCLAYIDDENISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVETDGKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPK+L LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKILPLKDILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L +AL NID I++IR TP EAK ++ +W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEALAVALANIDPIIELIRQEPTPAEAKAALVARSWALGTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 SAMLDRAGDDAARPEWLEPEYGIRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL N ++E+I +EL IK +Y + RR+EI N + + EDLI
Sbjct: 480 ELLTQIAELIRILQNPDCLMEVIREELVAIKEQY----NDPRRTEITANTSDINIEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD IL FS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAASIKEEDFIDRLLVANTHDTILLFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YW+KV+Q+P+ SR +RG+PI+N+ L++ E+IT ILP+ R++ + +VFM+T+
Sbjct: 596 RGRMYWMKVYQLPEASRGARGRPIVNLLPLESNERITAILPV----REYEEGRHVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L FS PR +GIIAVNL++ D LIG LTDGS ++MLFS GK VRF EN V
Sbjct: 652 SGTVKKTSLIEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSAYGKVVRFPENQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV G+ L + +V++L+V + +LT T++GYGKRT EY +R T+G
Sbjct: 712 RSMGRTATGVRGINLAEGDRVVSLIVPRGEG-PILTVTQHGYGKRTAQAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK ++RNG+VV A V+ +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 771 VISIKVSERNGEVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAQD 830
Query: 841 SKLCGVQ 847
+ G+Q
Sbjct: 831 EHVVGLQ 837
>gi|260913652|ref|ZP_05920128.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Pasteurella dagmatis
ATCC 43325]
gi|260632191|gb|EEX50366.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Pasteurella dagmatis
ATCC 43325]
Length = 901
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/875 (52%), Positives = 633/875 (72%), Gaps = 39/875 (4%)
Query: 6 KEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVK 65
+++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N+P+ K
Sbjct: 17 QDISPISIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYNKPYRK 76
Query: 66 CARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTEC 125
AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE
Sbjct: 77 SARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDAAAAMRYTEA 136
Query: 126 RLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPH 185
R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMATNIPPH
Sbjct: 137 RMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMATNIPPH 196
Query: 186 NLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAK 245
NL EV+DG L + N E +I++L+ IP PDFPTA +I G + + Y TG+G++ +RAK
Sbjct: 197 NLGEVLDGCLAYIENNEITIDELMTYIPGPDFPTAALINGRKGIEEAYKTGRGKIYVRAK 256
Query: 246 THIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVI 305
+E + T I++ E+PYQVNK L+EKI+ LVKEKK+E IS + D SDK GMRI I
Sbjct: 257 AEVETDEKGGET-IVVHEIPYQVNKAKLIEKIADLVKEKKIEGISAITDLSDKDGMRIEI 315
Query: 306 ELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRR 365
++KR+ + E+VLN LY TQLQ TFG+N++AL GQPKLLNLK+++ F+LHR+EV+ RR
Sbjct: 316 KIKRDAVGEVVLNNLYALTQLQVTFGINIVALDKGQPKLLNLKQLIEAFVLHRREVVTRR 375
Query: 366 TIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG 425
T++ELRKARE AHILEGL IAL N+D I++IR P+ AK ++I W L V+ ++
Sbjct: 376 TVYELRKARERAHILEGLAIALANVDPIIELIRQAPNPETAKRELIAQPWKLGHVADMLA 435
Query: 426 FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKK 485
+ ++ +++ MY L+++QAQ IL + LQ+LTN+ +I+++Y+ +++
Sbjct: 436 AAGVDAARPEELEEQYGIRDG-MYYLTEVQAQAILDLRLQKLTNLGHDEILDEYQKLLEV 494
Query: 486 VIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMV 545
+ +L IL + +R++E+I +EL I+ ++ + RR+EI ++ + + EDLIA +D+V
Sbjct: 495 IGELLYILRSPERLMEVIREELEQIREQF----NDPRRTEITASSGDINLEDLIAQEDVV 550
Query: 546 ITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLY 605
+TLS+ GY+K QP+++Y AQ+RGG+GK A TK+ED+I +L +ANTHD ILCFS+ GRLY
Sbjct: 551 VTLSHEGYVKYQPLTDYEAQRRGGKGKSAAKTKEEDFIERLLVANTHDTILCFSSRGRLY 610
Query: 606 WLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVK 665
WLKV+Q+PQ SR SRG+PI+N+ L E+IT ILP++ + ++ +V M+T+ GIVK
Sbjct: 611 WLKVYQLPQASRGSRGRPIVNILPLDENERITAILPVTA----YEEDKFVVMATAGGIVK 666
Query: 666 KTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGR 725
K L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E++VRAMGR
Sbjct: 667 KISLTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSAQGRVVRFSESAVRAMGR 726
Query: 726 SARGVIGMRLE----------------------------KKQKVIALLVSNNQKQSVLTA 757
+A GV G++L KV++L++ NQ ++LTA
Sbjct: 727 AATGVRGIKLALTNDLSDDESAVEIEDISDDNSDDILDLNVDKVVSLVIPKNQG-AILTA 785
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
T+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RT
Sbjct: 786 TQNGYGKRTELVEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRT 845
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RV+EI +GR+TQGV LI L G+QR+C++
Sbjct: 846 RVNEISVVGRNTQGVRLIRTTEDETLVGLQRVCEV 880
>gi|326794746|ref|YP_004312566.1| DNA gyrase subunit alpha [Marinomonas mediterranea MMB-1]
gi|326545510|gb|ADZ90730.1| DNA gyrase, A subunit [Marinomonas mediterranea MMB-1]
Length = 881
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/849 (52%), Positives = 622/849 (73%), Gaps = 10/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + +E E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+E+ N WN
Sbjct: 1 MGELAKEIIPVSIENELKGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++Y+ +VRMAQ FS+R TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYETIVRMAQPFSMRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KIS+ LL+DL+KET+DF+ NYD E P VLP RIP LL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRMDKISHHLLMDLEKETVDFVPNYDESETMPEVLPARIPGLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L ++ PE I++L++ IP PDFPT I G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVINGCLALIDRPEIEIDELMEFIPGPDFPTGAFINGRAGIVEAYKTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ H+E+ + NR AI+ E+PYQ+NK ++EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 YMRARHHVEDMEKGNRQAIVFTEIPYQLNKAKVIEKIAELVKEKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E P++V+N ++ QTQLQ+ FG+NM+ALV+G+P+LLNLK+IL F+ HR+E
Sbjct: 301 MRIVIELRRGENPDVVVNNIFTQTQLQSVFGINMVALVDGRPELLNLKQILECFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL +AL NID I++IR++ + EA+ K+I +W DV
Sbjct: 361 VVTRRTIFELRKARERGHILEGLAVALANIDRVIELIRTSPSSAEAREKLIAESWQPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + ++ NN Y+LS QAQ IL + L RLT +E +K++++Y+
Sbjct: 421 MAMLERAGADACRPDDLDPQFGF-NNGAYRLSPDQAQAILDLRLHRLTGLEHEKLLSEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++I + +L +IL N R++E+I +EL +++++G R +EI+ + + + DLI
Sbjct: 480 DLIAVIAELLEILGNPTRLMEVICEELEAVRDQFGDE----RLTEILTSRQDLTIADLID 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
MV+T+S+ GY KSQP+ EY+AQ+RGGRGK + KDED I+ L + ++HD ++ FSN
Sbjct: 536 EAPMVVTISDTGYAKSQPLEEYKAQRRGGRGKSSATMKDEDHISHLLVTSSHDTVMLFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G++YWL+V++IP SR ++G+PI+N+ L E I+ +LPL++ D +Y+FM+T+
Sbjct: 596 FGKVYWLRVFEIPVASRTAKGRPIVNLLPLAEGEHISALLPLNDEMED----SYIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT + F+ PR +G+IA++L D L+G A T G DIML S SGK +RF E+ V
Sbjct: 652 NGTVKKTAVEYFARPRSTGLIALSLDENDELVGVAQTSGENDIMLVSSSGKTIRFKESDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G+RL + KV++L+V + SVL A ENG+GKRTL +++ + RG +G
Sbjct: 712 RAMGRTAAGVRGIRLADEYKVVSLIVP-QEGCSVLFACENGFGKRTLTEDFPVYGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I I+ ++RNG VV AT V EIMLI+ G L+RTR SE+ GR+TQGV LI + N
Sbjct: 771 VIGIQVSERNGPVVGATQVEDTDEIMLISDQGTLVRTRASEVSCQGRNTQGVTLIRLMND 830
Query: 841 SKLCGVQRL 849
L GV+R+
Sbjct: 831 EHLVGVERV 839
>gi|410619284|ref|ZP_11330189.1| DNA gyrase subunit A [Glaciecola polaris LMG 21857]
gi|410161178|dbj|GAC34327.1| DNA gyrase subunit A [Glaciecola polaris LMG 21857]
Length = 897
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/875 (53%), Positives = 635/875 (72%), Gaps = 37/875 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + A E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MTENAGEILPINIEEELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DL+KET++F+ NYDG E P VLPT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKISHELLADLEKETVNFVPNYDGTEFIPEVLPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G + ++ PE SI +L++ IP PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCIALIDKPELSIEELMEYIPGPDFPTAAFISGRKGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + T I++ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRARADVEREDNGKET-IVVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KRNE E++LN LY QTQ+Q FG+NM+AL QPK+ NL EIL F+LHR+E
Sbjct: 300 MRIVVEVKRNESGEVLLNHLYSQTQMQTVFGINMVALDKTQPKIFNLLEILQAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE AHILEGL IAL NID I +I+++ +P EAK + W L DV
Sbjct: 360 VVTRRTVFELKKARERAHILEGLAIALVNIDPIIALIKASKSPSEAKIALTAQGWQLGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++++ G + + + I + +Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AEMLERAGDDAARPDWLEPEYGI----RDGLYYLTEQQAQAILDLRLNKLTGLEHEKILS 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ + +L IL + +R++E+I +EL I++++G + RR+EI + + ED
Sbjct: 476 EYKELLGVIAELLHILGSPERLMEVIREELEKIRDEFG----DARRTEITAASHDIDIED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +++V+TLS GY+K Q +++Y +Q+RGG+GK A K+ED+I +L +ANTHD+ILC
Sbjct: 532 LIEREEVVVTLSREGYVKYQKLNDYESQRRGGKGKSATKMKEEDFIEKLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + YV M
Sbjct: 592 FSTRGRLYWLKVYQLPLASRNARGRPIVNILPLEANERITAILPI----KEFEEGKYVLM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS +S PR +GIIAVNL++ D LIG +TDGS DIMLFSD+GK VRFNE
Sbjct: 648 ATANGTVKKTALSQYSRPRANGIIAVNLNDGDELIGVDITDGSSDIMLFSDAGKVVRFNE 707
Query: 718 N--------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTA 757
++R MGR+A GV G+RL++ QKV++L+V ++LTA
Sbjct: 708 KARDSETGAVKLDPETGEEILALRPMGRTATGVRGIRLQEGQKVVSLIVPQGDG-AILTA 766
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
TENG+GKRT +++Y +R T+G++SIK ++RNG+VV A VN EIMLI+ G L+RT
Sbjct: 767 TENGFGKRTPVEDYPAKSRATQGVVSIKVSERNGRVVGAVQVNESDEIMLISDQGTLVRT 826
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RV E+ +GR+TQGV LI + G+QR+ +I
Sbjct: 827 RVGEVSTVGRNTQGVRLIRTAEDEHVVGLQRIDEI 861
>gi|15802778|ref|NP_288805.1| DNA gyrase subunit A [Escherichia coli O157:H7 str. EDL933]
gi|12516566|gb|AAG57360.1|AE005455_1 DNA gyrase, subunit A, type II topoisomerase [Escherichia coli
O157:H7 str. EDL933]
Length = 875
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/879 (52%), Positives = 637/879 (72%), Gaps = 13/879 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI ++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGXMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R I+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETXIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQLV 879
+ G+QR+ + + + TIDG A G +A V
Sbjct: 831 ENVVGLQRVAEPVDEED---LDTIDGSAAEGDDEIAPEV 866
>gi|398926468|ref|ZP_10662464.1| DNA gyrase, A subunit [Pseudomonas sp. GM48]
gi|398170735|gb|EJM58663.1| DNA gyrase, A subunit [Pseudomonas sp. GM48]
Length = 884
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/852 (51%), Positives = 634/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ + Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E G+GKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGFGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
N L G++R+
Sbjct: 829 ANDETLVGLERV 840
>gi|420381189|ref|ZP_14880642.1| DNA gyrase, A subunit [Shigella dysenteriae 225-75]
gi|391300675|gb|EIQ58587.1| DNA gyrase, A subunit [Shigella dysenteriae 225-75]
Length = 875
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/884 (52%), Positives = 638/884 (72%), Gaps = 23/884 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDCAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++ +Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLGEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +R G VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERKGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 ENVVGLQRVAE--------PVDEEDLDTIDGSVAEGDDEIAPEV 866
>gi|386834006|ref|YP_006239321.1| DNA gyrase subunit A [Pasteurella multocida subsp. multocida str.
3480]
gi|385200707|gb|AFI45562.1| DNA gyrase, A subunit [Pasteurella multocida subsp. multocida str.
3480]
Length = 893
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/875 (52%), Positives = 630/875 (72%), Gaps = 39/875 (4%)
Query: 6 KEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVK 65
+++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N+P+ K
Sbjct: 11 QDISPISIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYNKPYRK 70
Query: 66 CARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTEC 125
AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE
Sbjct: 71 SARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDAAAAMRYTEA 130
Query: 126 RLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPH 185
R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMATNIPPH
Sbjct: 131 RMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMATNIPPH 190
Query: 186 NLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAK 245
NL EV+DG L + N E SI++L+ IP PDFPTA +I G + + Y TG+G++ +RAK
Sbjct: 191 NLGEVLDGCLAYIENNEISIDELMTYIPGPDFPTAALINGRKGIEEAYKTGRGKIYVRAK 250
Query: 246 THIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVI 305
+E + T I++ E+PYQVNK L+EKI+ LVKEKK+E IS + D SDK GMRI I
Sbjct: 251 AEVETDEKGGET-IVVHEIPYQVNKAKLIEKIADLVKEKKVEGISAITDLSDKDGMRIEI 309
Query: 306 ELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRR 365
++KR+ + E+VLN LY TQLQ TFG+N++AL GQPKLLNLK+++ F+LHR+EV+ RR
Sbjct: 310 KIKRDAVGEVVLNNLYALTQLQVTFGINIVALDKGQPKLLNLKQLIEAFVLHRREVVTRR 369
Query: 366 TIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG 425
T++ELRKARE AHILEGL IAL N+D I++IR+ P+ AK ++ W L VS+++
Sbjct: 370 TVYELRKARERAHILEGLAIALANVDPIIELIRNAPNPESAKRALLAQAWELGHVSQMLA 429
Query: 426 FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKK 485
+ + +++ MY L+++QAQ IL + LQ+LTN+ +I+++Y+ ++
Sbjct: 430 ATGVDAARPEDLEEQYGIRDG-MYYLTEVQAQAILDLRLQKLTNLGHDEILDEYKKLLDV 488
Query: 486 VIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMV 545
+ +L IL + +R++E+I +EL I+ ++ + RR+EI ++ + + EDLIA +D+V
Sbjct: 489 IGELLHILRSPERLMEVIREELEQIREQF----NDPRRTEITASSADINLEDLIAQEDVV 544
Query: 546 ITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLY 605
+TLS+ GY+K QP+++Y AQ+RGG+GK A TK+ED+I +L +ANTHD ILCFS+ GRLY
Sbjct: 545 VTLSHEGYVKYQPLTDYEAQRRGGKGKSAAKTKEEDFIERLLVANTHDTILCFSSRGRLY 604
Query: 606 WLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVK 665
WLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+ GIVK
Sbjct: 605 WLKVYQLPQASRGARGRPIVNILPLDENERITAILPVTA----YEEDKFVVMATAGGIVK 660
Query: 666 KTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGR 725
K L+ FS PR +GIIA+NL +ED LIG +TDG +IMLFS G+ VRF+EN+VRAMGR
Sbjct: 661 KIALTEFSRPRSTGIIALNLRDEDELIGVDITDGQNEIMLFSAQGRVVRFSENAVRAMGR 720
Query: 726 SARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTA 757
+A GV G++L KV++L++ N+ ++LTA
Sbjct: 721 AATGVRGIKLALTNDLSDDESAVDMEEISDENTNDALDLNIDKVVSLVIPKNEG-AILTA 779
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
T+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RT
Sbjct: 780 TQNGYGKRTELAEYPTKSRNTKGVISIKVSERNGKVVAATQVEESDQIMLITDAGTLVRT 839
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RV+EI +GR+TQGV LI L G+QR+C +
Sbjct: 840 RVNEINIIGRNTQGVRLIRTSESETLVGLQRVCDV 874
>gi|420090975|ref|ZP_14602733.1| DNA gyrase subunit A, partial [Escherichia coli O111:H8 str.
CVM9602]
gi|394384354|gb|EJE61914.1| DNA gyrase subunit A, partial [Escherichia coli O111:H8 str.
CVM9602]
Length = 844
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/851 (53%), Positives = 629/851 (73%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 831 ENVVGLQRVAE 841
>gi|359441565|ref|ZP_09231458.1| DNA gyrase subunit A [Pseudoalteromonas sp. BSi20429]
gi|392532810|ref|ZP_10279947.1| DNA gyrase, subunit A, type II topoisomerase [Pseudoalteromonas
arctica A 37-1-2]
gi|358036585|dbj|GAA67707.1| DNA gyrase subunit A [Pseudoalteromonas sp. BSi20429]
Length = 899
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/879 (52%), Positives = 633/879 (72%), Gaps = 38/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S+ELL DL+KET+DF+ NYDG E P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEFIPDVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++ NP+ +I +L+ IP PDFPTA II G + Y TG+G+V
Sbjct: 181 NIPPHNLTEVVNGCLALIQNPDLTILELMDYIPGPDFPTAAIINGKKGIEQAYLTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRARADVETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR ++ E++LN LY QTQLQ FGMNM+AL+N QPK NLKE+L FI+HR+E
Sbjct: 301 MRIVIEIKRGDVGEVILNNLYSQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F+LRKAR+ AH LEGL IAL NID I++IR + TP EAK + W L V
Sbjct: 361 VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKIALTARPWELGHV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ K + +++ + ++ + Y +S+ QAQ IL + L +LT +E +KI+ +
Sbjct: 421 QGML--EKAGEDNVARPDWLADDLGIRDGQYYISEQQAQAILDLRLHKLTGLEHEKILTE 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +++ + +L IL+ +R++E+I DEL IK +YG RR+EI A + S EDL
Sbjct: 479 YQALLELIAELLYILATPERLMEVIRDELVEIKAQYGDE----RRTEINAAAHDISLEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILCF
Sbjct: 535 ITEENVVVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ R++ ++ Y+FM+
Sbjct: 595 STAGRLYWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPV----REYAEDKYIFMA 650
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE- 717
T+ G VKKT L+ +S R SGIIAVNL++ D LIG +TDGS +IMLF+D+GK VRF E
Sbjct: 651 TAFGTVKKTPLTAYSRQRASGIIAVNLNDGDSLIGVDITDGSNEIMLFTDAGKVVRFKEA 710
Query: 718 ------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS 753
VR MGR+A GV G+++ +Q+V++L+V +
Sbjct: 711 EETTVVDENGNPVLDEEGNPEIRFKGVRPMGRTATGVRGIKMPDEQRVVSLIVPKTDG-A 769
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LT TENGYGKRT +++Y +R T+G++SIK ++RNG VV A V+ EIM+I+ G
Sbjct: 770 ILTVTENGYGKRTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGT 829
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ +GR+TQGVILI + ++ G+QR+ +I
Sbjct: 830 LVRTRVNEVSTVGRNTQGVILIRTIDGEQVVGLQRIEEI 868
>gi|398917338|ref|ZP_10658112.1| DNA gyrase, A subunit [Pseudomonas sp. GM49]
gi|398173032|gb|EJM60878.1| DNA gyrase, A subunit [Pseudomonas sp. GM49]
Length = 884
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/852 (51%), Positives = 634/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ + Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E G+GKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGFGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
N L G++R+
Sbjct: 829 ANDETLVGLERV 840
>gi|425063530|ref|ZP_18466655.1| DNA gyrase subunit A [Pasteurella multocida subsp. gallicida X73]
gi|404383093|gb|EJZ79550.1| DNA gyrase subunit A [Pasteurella multocida subsp. gallicida X73]
Length = 893
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/875 (52%), Positives = 629/875 (71%), Gaps = 39/875 (4%)
Query: 6 KEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVK 65
+++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N+P+ K
Sbjct: 11 QDISPISIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYNKPYRK 70
Query: 66 CARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTEC 125
AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE
Sbjct: 71 SARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDAAAAMRYTEA 130
Query: 126 RLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPH 185
R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMATNIPPH
Sbjct: 131 RMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMATNIPPH 190
Query: 186 NLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAK 245
NL EV+DG L + N E SI++L+ IP PDFPTA +I G + + Y TG+G++ +RAK
Sbjct: 191 NLGEVLDGCLAYIENNEISIDELMTYIPGPDFPTAALINGRKGIEEAYKTGRGKIYVRAK 250
Query: 246 THIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVI 305
+E + T I++ E+PYQVNK L+EKI+ LVKEKK+E IS + D SDK GMRI I
Sbjct: 251 AEVETDEKGGET-IVVHEIPYQVNKAKLIEKIADLVKEKKVEGISAITDLSDKDGMRIEI 309
Query: 306 ELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRR 365
++KR+ + E+VLN LY TQLQ TFG+N++AL GQPKLLNLK+++ F+LHR+EV+ RR
Sbjct: 310 KIKRDAVGEVVLNNLYALTQLQVTFGINIVALDKGQPKLLNLKQLIEAFVLHRREVVTRR 369
Query: 366 TIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG 425
T++ELRKARE AHILEGL IAL N+D I++IR+ P+ AK ++ W L VS+++
Sbjct: 370 TVYELRKARERAHILEGLAIALANVDPIIELIRNAPNPESAKRALLAQAWELGHVSQMLA 429
Query: 426 FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKK 485
+ + +++ MY L+++QAQ IL + LQ+LTN+ +I+ +Y+ ++
Sbjct: 430 ATGVDAARPEDLEEQYGIRDG-MYYLTEVQAQAILDLRLQKLTNLGHDEILYEYKKLLDV 488
Query: 486 VIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMV 545
+ +L IL + +R++E+I +EL I+ ++ + RR+EI ++ + + EDLIA +D+V
Sbjct: 489 IGELLHILRSPERLMEVIREELEQIREQF----NDPRRTEITASSADINLEDLIAQEDVV 544
Query: 546 ITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLY 605
+TLS+ GY+K QP+++Y AQ+RGG+GK A TK+ED+I +L +ANTHD ILCFS+ GRLY
Sbjct: 545 VTLSHEGYVKYQPLTDYEAQRRGGKGKSAAKTKEEDFIERLLVANTHDTILCFSSRGRLY 604
Query: 606 WLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVK 665
WLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+ GIVK
Sbjct: 605 WLKVYQLPQASRGARGRPIVNILPLDENERITAILPVTA----YEEDKFVVMATAGGIVK 660
Query: 666 KTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGR 725
K L+ FS PR +GIIA+NL +ED LIG +TDG +IMLFS G+ VRF+EN+VRAMGR
Sbjct: 661 KIALTEFSRPRSTGIIALNLRDEDELIGVDITDGQNEIMLFSAQGRVVRFSENAVRAMGR 720
Query: 726 SARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTA 757
+A GV G++L KV++L++ N+ ++LTA
Sbjct: 721 AATGVRGIKLALTNDLSDDESAVDMEEISDENTNDALDLNIDKVVSLVIPKNEG-AILTA 779
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
T+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RT
Sbjct: 780 TQNGYGKRTELAEYPTKSRNTKGVISIKVSERNGKVVAATQVEESDQIMLITDAGTLVRT 839
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RV+EI +GR+TQGV LI L G+QR+C +
Sbjct: 840 RVNEINIIGRNTQGVRLIRTSESETLVGLQRVCDV 874
>gi|114563301|ref|YP_750814.1| DNA gyrase subunit A [Shewanella frigidimarina NCIMB 400]
gi|114334594|gb|ABI71976.1| DNA gyrase subunit A [Shewanella frigidimarina NCIMB 400]
Length = 909
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/876 (54%), Positives = 621/876 (70%), Gaps = 39/876 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A + I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TL+DGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLIDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ LL DL+KET+DF+ NYDG E P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMQKLAHSLLADLEKETVDFVPNYDGTEMIPAVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ +P SI L++ IP PDFPTA I G + D Y TG+GR
Sbjct: 181 NIPPHNLTEVVKGCLALIEDPSLSIEQLMEYIPGPDFPTAASINGRKGIIDAYNTGRGRA 240
Query: 241 IIRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
I+R+K IE EN R II+ E+PYQVNK L+EKI++LVK+KKLE IS LRDESDK
Sbjct: 241 IMRSKAEIE--TEENGRERIIVHEIPYQVNKARLIEKIAELVKDKKLEGISGLRDESDKD 298
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIE+KR E+ E+VLN LY QTQ+Q +FG+NM+AL NGQPKL NLKE+L FILHR+
Sbjct: 299 GMRIVIEIKRGEVGEVVLNNLYSQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRR 358
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE AH+LE L IAL NID I +I+++ TP EAK K++ W L
Sbjct: 359 EVVTRRTVFELRKARERAHVLEALAIALANIDPIIALIKASPTPAEAKAKLVAQGWELGH 418
Query: 420 VSKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
V ++ G + + I Q Y L++ QAQ IL++ L RLT +E KI+
Sbjct: 419 VQGMLEKAGDDAARPEWLEPEFGIRDGQ----YYLTEQQAQAILELRLHRLTGLEHDKIL 474
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
+YE ++ + L IL R++E+I +EL I +YG RR+ I N I+ S E
Sbjct: 475 AEYEELLVLIAGLLFILRTPSRLMEVIKEELEEILEQYGDE----RRTIINANEIDMSLE 530
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLI +D+V+TLS+LGY K Q +S+Y+AQ+RGG+GK A KDED++ +L +ANTHD IL
Sbjct: 531 DLINEEDVVVTLSHLGYAKYQVLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTIL 590
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CFS++G++YWLKV+Q+P SR +RG+PI+N+ L + E IT ILP+ R++ + Y+
Sbjct: 591 CFSDFGKMYWLKVYQLPLASRTARGRPIVNLLPLSDGEHITAILPV----REYADDKYII 646
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
M+T+ G VKKT L+ +SNPR +GIIAVNL + D LIG +T+GS DIMLFS+ GK VRFN
Sbjct: 647 MATAHGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITEGSDDIMLFSNEGKVVRFN 706
Query: 717 EN--------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLT 756
E ++R MGR+A GV G++L+ QKV++L+V ++LT
Sbjct: 707 EKARDSETGEVKIDAETGEEIIALRPMGRTATGVRGIKLDAGQKVVSLIVPKGDG-AILT 765
Query: 757 ATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIR 816
TENGYGKRT + EY +RGTKG++SIK ++RNG+VV A V + EIMLI+ G L+R
Sbjct: 766 VTENGYGKRTELSEYPAKSRGTKGVVSIKVSERNGEVVGAVQVGTFDEIMLISNKGTLVR 825
Query: 817 TRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
T + +GR+TQGV +I K+ G+QR+ +I
Sbjct: 826 TPAEGVSIIGRNTQGVTIIRTAEDEKVVGLQRIEEI 861
>gi|406978769|gb|EKE00665.1| hypothetical protein ACD_21C00296G0012 [uncultured bacterium]
Length = 851
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/852 (55%), Positives = 634/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M Q AKE+ + +E+E+ +SYLDYAMSVIV RALPDVRDGLKPVHRR L+AM E+ N +N
Sbjct: 1 MTQPAKEITVVNIEDELKQSYLDYAMSVIVSRALPDVRDGLKPVHRRSLYAMRELGNEYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQSFSLR LVDGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQSFSLRYPLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ LLIDLDKET+DF NYDG E P VLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHFLLIDLDKETVDFAPNYDGTEFAPQVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+D L ++ NPE + DLIKIIP PDFPTAGII G + + + Y TG+G++
Sbjct: 181 NIPPHNLGEVVDACLALIDNPEVELRDLIKIIPGPDFPTAGIINGRAGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE N+ I+++ELPYQVNK +LL +I++LVKEKK+E I+ +RDESDK G
Sbjct: 241 CVRSKVTIETDEDSNKQTIVVNELPYQVNKANLLVRIAELVKEKKVEGITAVRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+V+EL+R E+ E++LN L+ TQ+Q TFG+N++AL NGQPK LNLK++L F+ HR+E
Sbjct: 301 MRVVVELRRGELAEVILNNLFLNTQMQVTFGINVVALDNGQPKTLNLKQLLEAFLKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR++FEL++AR+ AHILEGL+IAL NID I +I+ + P AK +++ W V
Sbjct: 361 VVVRRSVFELKQARKRAHILEGLSIALANIDEMIALIKRSQNPVVAKQELLARAWQTGFV 420
Query: 421 SKIIGFNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++ ++ IS+ +++S+ + N Y+LS+ QAQ IL + L RLT +EQ KI N
Sbjct: 421 KTML---EQVGAVISRPDDLSEEFGVTKNGDYRLSEAQAQAILDLRLHRLTGLEQDKIFN 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ + L DIL+ + ++++I EL ++ + RR+EI+ + + ED
Sbjct: 478 EYKELLDDIKRLLDILATPELLLDVIRKELLEMREMFADK----RRTEIVETQEDLTRED 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY K Q +++Y+AQKRGG+GK A K+ED++ +LFIANTHD ILC
Sbjct: 534 LITPEDVVVTLSHEGYAKIQAVTDYQAQKRGGKGKTATKVKEEDFVERLFIANTHDTILC 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FSN G++YWLKV+ +PQG+R SRGKP+IN+F L+ E+I ILP+ R++ N+Y+FM
Sbjct: 594 FSNKGKVYWLKVYLLPQGNRTSRGKPLINLFPLEKDERINTILPI----REYLPNHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKK L FSNPR +GIIAV+L +D LI ALTDG +IMLFSD+GKAVRF E
Sbjct: 650 ATAKGTVKKVPLEQFSNPRSNGIIAVDLQPDDNLINVALTDGKQEIMLFSDAGKAVRFAE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VR+MGR+A GV GMRL+ QK+I+L+++ N ++LTATENGYGKRT I E++ NRG
Sbjct: 710 DQVRSMGRTAMGVRGMRLKDDQKLISLVIA-NPTGAILTATENGYGKRTAISEFSVVNRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I+I+ +RNGK V A V+ EIMLI++ G L+RTRV EI +GR+TQGV LI +
Sbjct: 769 AQGVIAIQVGERNGKAVCAIQVDAGDEIMLISSQGTLVRTRVDEISVIGRNTQGVRLINL 828
Query: 838 ENKSKLCGVQRL 849
L GVQR+
Sbjct: 829 GEGENLVGVQRV 840
>gi|383310525|ref|YP_005363335.1| DNA gyrase subunit A [Pasteurella multocida subsp. multocida str.
HN06]
gi|380871797|gb|AFF24164.1| DNA gyrase subunit A [Pasteurella multocida subsp. multocida str.
HN06]
Length = 893
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/875 (52%), Positives = 630/875 (72%), Gaps = 39/875 (4%)
Query: 6 KEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVK 65
+++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N+P+ K
Sbjct: 11 QDISPISIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYNKPYRK 70
Query: 66 CARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTEC 125
AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE
Sbjct: 71 SARIVGDVIGKYHPHGDRAVYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDAAAAMRYTEA 130
Query: 126 RLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPH 185
R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMATNIPPH
Sbjct: 131 RMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMATNIPPH 190
Query: 186 NLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAK 245
NL EV+DG L + N E +I++L+ IP PDFPTA +I G + + Y TG+G++ +RAK
Sbjct: 191 NLGEVLDGCLAYIENNEINIDELMTYIPGPDFPTAALINGRKGIEEAYKTGRGKIYVRAK 250
Query: 246 THIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVI 305
+E + T I++ E+PYQVNK L+EKI+ LVKEKK+E IS + D SDK GMRI I
Sbjct: 251 AEVETDEKGGET-IVVHEIPYQVNKAKLIEKIADLVKEKKVEGISAITDLSDKDGMRIEI 309
Query: 306 ELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRR 365
++KR+ + E+VLN LY TQLQ TFG+N++AL GQPKLLNLK+++ F+LHR+EV+ RR
Sbjct: 310 KIKRDAVGEVVLNNLYALTQLQVTFGINIVALDKGQPKLLNLKQLIEAFVLHRREVVTRR 369
Query: 366 TIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG 425
T++ELRKARE AHILEGL IAL N+D I++IR+ P+ AK ++ W L VS+++
Sbjct: 370 TVYELRKARERAHILEGLAIALANVDPIIELIRNAPNPESAKRALLAQAWELGHVSQMLA 429
Query: 426 FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKK 485
+ + +++ MY L+++QAQ IL + LQ+LTN+ +I+++Y+ ++
Sbjct: 430 ATGVDAARPEDLEEQYGIRDG-MYYLTEVQAQAILDLRLQKLTNLGHDEILDEYKKLLDV 488
Query: 486 VIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMV 545
+ +L IL + +R++E+I +EL I+ ++ + RR+EI ++ + + EDLIA +D+V
Sbjct: 489 IGELLHILRSPERLMEVIREELEQIREQF----NDPRRTEITASSADINLEDLIAQEDVV 544
Query: 546 ITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLY 605
+TLS+ GY+K QP+++Y AQ+RGG+GK A TK+ED+I +L +ANTHD ILCFS+ GRLY
Sbjct: 545 VTLSHEGYVKYQPLTDYEAQRRGGKGKSAAKTKEEDFIERLLVANTHDTILCFSSRGRLY 604
Query: 606 WLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVK 665
WLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+ GIVK
Sbjct: 605 WLKVYQLPQASRGARGRPIVNILPLDENERITAILPVTA----YEEDKFVVMATAGGIVK 660
Query: 666 KTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGR 725
K L+ FS PR +GIIA+NL +ED LIG +TDG +IMLFS G+ VRF+EN+VRAMGR
Sbjct: 661 KIALTEFSRPRSTGIIALNLRDEDELIGVDITDGQNEIMLFSAQGRVVRFSENAVRAMGR 720
Query: 726 SARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTA 757
+A GV G++L KV++L++ N+ ++LTA
Sbjct: 721 AATGVRGIKLALTNDLSDDESAVDIEEISDDNTSETLDLNIDKVVSLVIPKNEG-AILTA 779
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
T+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RT
Sbjct: 780 TQNGYGKRTELAEYPTKSRNTKGVISIKVSERNGKVVAATQVEESDQIMLITDAGTLVRT 839
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RV+EI +GR+TQGV LI L G+QR+C +
Sbjct: 840 RVNEINIIGRNTQGVRLIRTSENETLVGLQRVCDV 874
>gi|312881692|ref|ZP_07741470.1| DNA gyrase, A subunit [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370755|gb|EFP98229.1| DNA gyrase, A subunit [Vibrio caribbenthicus ATCC BAA-2122]
Length = 871
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/852 (54%), Positives = 626/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT++PNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVLNYDGTEQIPAVLPTKVPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + +I++L++ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLEYIDNEDITIDELMEFIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + I++ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADIET-DKNGKETIVVSEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQP+L NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALNNGQPQLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR TP EAK + WNL +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRKAPTPAEAKLGLTARGWNLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + LQ+LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEAQFGIRDGQ----YFLTEQQAQAILDLRLQKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I +EL +++ +G RR+EI + + E+
Sbjct: 476 EYKTLLDEIAELMIILASTERLMEVIREELIAVRDGFGDE----RRTEITAASHDIDLEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SRN+RGKPI+N+ L+ E+IT ILP+ F ++ ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRNARGKPIVNILPLEEGERITAILPVDQ----FCEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL ++D LIG +T G DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTPLTQFANVRANGLIAVNLRDDDSLIGVDITTGDSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L +V++L+V N VLT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLNDDDQVVSLIVPANDG-DVLTVTQNGYGKRTQLSEYPVKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK + RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSDRNGPVVGAVQVVEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDESVVGLQRI 838
>gi|410625441|ref|ZP_11336226.1| DNA gyrase subunit A [Glaciecola mesophila KMM 241]
gi|410155037|dbj|GAC22995.1| DNA gyrase subunit A [Glaciecola mesophila KMM 241]
Length = 897
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/871 (53%), Positives = 631/871 (72%), Gaps = 35/871 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MTDHAQEILPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DL+KET+DF+ NYDG E P VLPT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKISHELLADLEKETVDFVPNYDGTEFIPDVLPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G + ++ PE SI +L++ IP PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCIALIDKPELSIEELMEYIPGPDFPTAAFISGRKGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + T I++ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRARAEIEREDNGKET-IVVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KRNE E++LN LY QTQ+Q FG+NM+AL QPK+ NL EIL F+LHR+E
Sbjct: 300 MRIVVEVKRNESGEVLLNHLYSQTQMQTVFGINMVALDKTQPKVFNLLEILQAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE AHILEGL IAL NID I +I+++ +P +AK + W L DV
Sbjct: 360 VVTRRTVFELKKARERAHILEGLAIALANIDPIIALIKASKSPSDAKISLTAQGWALGDV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S ++ ++ N ++ + + + +Y L++ QAQ IL + L +LT +E +KI+++
Sbjct: 420 SDML---ERAGNDAARPDWLEPEFGIRDGLYYLTEQQAQAILDLRLNKLTGLEHEKILSE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L IL + +R++E+I +EL I++++G RR+EI + + EDL
Sbjct: 477 YKELLDLIAELLHILGSPERLMEVIREELEKIRDEFGDE----RRTEITAASHDIDIEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS GY+K Q +++Y +Q+RGG+GK A K+ED+I +L +ANTHD+ILCF
Sbjct: 533 IEREEVVVTLSREGYVKYQKLNDYESQRRGGKGKSATKMKEEDFIEKLLVANTHDHILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + YV M+
Sbjct: 593 STRGRLYWLKVYQLPLASRNARGRPIVNILPLEANERITAILPI----QEFEEGKYVLMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +S PR +GIIAVNL++ D LIG +TDGS DIMLFSD+GK VRFNE
Sbjct: 649 TANGTVKKTALVQYSRPRANGIIAVNLNDGDELIGVDITDGSSDIMLFSDAGKVVRFNEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+RL+ QKV++L+V ++LTAT
Sbjct: 709 ARDSETGAVKIDPETGEEILALRPMGRTATGVRGIRLQDGQKVVSLIVPQGDG-AILTAT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENG+GKRT +++Y +R T+G++SIK ++RNGKVV A VN EIMLI+ G L+RTR
Sbjct: 768 ENGFGKRTPVEDYPAKSRATQGVVSIKVSERNGKVVGAVQVNESDEIMLISDQGTLVRTR 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
V E+ +GR+TQGV LI + G+QR+
Sbjct: 828 VGEVSTVGRNTQGVRLIRTAEDEHVVGLQRI 858
>gi|410640740|ref|ZP_11351270.1| DNA gyrase subunit A [Glaciecola chathamensis S18K6]
gi|410648182|ref|ZP_11358596.1| DNA gyrase subunit A [Glaciecola agarilytica NO2]
gi|410132201|dbj|GAC06995.1| DNA gyrase subunit A [Glaciecola agarilytica NO2]
gi|410139768|dbj|GAC09457.1| DNA gyrase subunit A [Glaciecola chathamensis S18K6]
Length = 897
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/871 (53%), Positives = 633/871 (72%), Gaps = 35/871 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MTDHAQEILPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DL+KET+DF+ NYDG E P VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKISHELLADLEKETVDFVPNYDGTEFIPDVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G + ++ PE SI +L++ IP PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCIALIDKPELSIEELMEYIPGPDFPTAAFISGRKGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + T II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRARAEIEREDNGKET-IIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KRNE E++LN LY QTQ+Q FG+NM+AL QPK+ NL +IL F+LHR+E
Sbjct: 300 MRIVVEVKRNESGEVLLNHLYSQTQMQTVFGINMVALDKTQPKVFNLLDILKAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE AHILEGL IAL NID I +I+++ +P +AK + W L DV
Sbjct: 360 VVTRRTVFELKKARERAHILEGLAIALANIDPIIALIKASKSPSDAKISLTAQGWQLGDV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S+++ ++ N ++ + + + +Y L++ QAQ IL + L +LT +E +KI+++
Sbjct: 420 SEML---ERAGNDAARPDWLEPEFGIRDGLYYLTEQQAQAILDLRLNKLTGLEHEKILSE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L IL + +R++E+I +EL I++++G RR+EI + + EDL
Sbjct: 477 YKELLDLIAELLHILGSPERLMEVIREELEKIRDEFGDE----RRTEITAASHDIDIEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS GY+K Q +++Y +Q+RGG+GK A K+ED+I +L +ANTHD+ILCF
Sbjct: 533 IEREEVVVTLSREGYVKYQKLNDYESQRRGGKGKSATKMKEEDFIEKLLVANTHDHILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + YV M+
Sbjct: 593 STRGRLYWLKVYQLPLASRNARGRPIVNILPLEENERITAILPI----QEFEEGKYVLMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +S PR +GIIAVNL++ D LIG +TDGS DIMLFSD+GK VRFNE
Sbjct: 649 TANGTVKKTALVQYSRPRANGIIAVNLNDGDELIGVDITDGSSDIMLFSDAGKVVRFNEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+RL++ Q+V++L+V ++LTAT
Sbjct: 709 ARDSETGAVKIDPETGEEILALRPMGRTATGVRGIRLQEGQRVVSLIVPQGDG-AILTAT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENG+GKRT +++Y +R T+G++SIK ++RNGKVV A VN EIMLI+ G L+RTR
Sbjct: 768 ENGFGKRTPVEDYPAKSRATQGVVSIKVSERNGKVVGAVQVNESDEIMLISDQGTLVRTR 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
V E+ +GR+TQGV LI + G+QR+
Sbjct: 828 VGEVSTVGRNTQGVRLIRTGADEHVVGLQRI 858
>gi|290473791|ref|YP_003466665.1| DNA gyrase subunit A, type II topoisomerase [Xenorhabdus bovienii
SS-2004]
gi|289173098|emb|CBJ79871.1| DNA gyrase, subunit A, type II topoisomerase [Xenorhabdus bovienii
SS-2004]
Length = 880
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/866 (53%), Positives = 626/866 (72%), Gaps = 29/866 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KSYKKSARVVGDVIGKYHPHGDSAVYDTIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DL+KET++F+ NYDG E+ P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLEKETVNFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EV+DG L + + SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEVVDGCLAYIDDENISIEGLMEYIPGPDFPTAAIINGRRGIQEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE + R II++E+PYQ+NK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAKIETDEKNGRETIIVNEIPYQINKARLIEKIAELVKDKRIEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQLQ +FG+NM+AL GQPKLLNLK+IL FI HR+E
Sbjct: 301 MRIVIEVKRDAVAEVVLNNLYSLTQLQVSFGINMVALHQGQPKLLNLKDILSAFINHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L +AL NID+ I++IR STP EAK +I W L +V
Sbjct: 361 VVTRRTIFELRKARERAHILEALAVALVNIDSAIELIRRASTPAEAKANLIAQAWELGNV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G + + I ++ Y L++ QAQ IL + LQ+LT +E +K+++
Sbjct: 421 SAMLEQAGDDAARPEWLEPEYGI----HDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLD 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y ++K + +L IL N +R+ E+I +EL IK++Y + RR+E+ N+ + + ED
Sbjct: 477 EYRELLKLIGELLFILENPERLREVIREELLAIKDQY----NDARRTELTENSADINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED++ +L +ANTHD ILC
Sbjct: 533 LINQEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFLERLLVANTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FSN G++YW+KV+Q+P+ SR +RG+PI+N+ L+ +E+IT ILP+ R++ +FM
Sbjct: 593 FSNKGKMYWMKVYQLPEASRGARGRPIVNLLPLEQEERITAILPV----REYEDGLNIFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS FS PR +GIIAV LS+ D LIG LTDGS ++MLFS GK VRF E
Sbjct: 649 ATASGTVKKTKLSEFSRPRSAGIIAVKLSDGDELIGVDLTDGSNEVMLFSAKGKVVRFLE 708
Query: 718 -------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGK 764
VRAMGR+A GV G++L KV++L++ + + +LT TENGYGK
Sbjct: 709 EDEETLEDGTIRVKGVRAMGRTAAGVRGIKLSAGDKVVSLIIPRGEGE-ILTVTENGYGK 767
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT EY +R T+G+ISIK ++RNG V+ A V +IM+IT G L+RTRVSE+
Sbjct: 768 RTAQSEYPTKSRATQGVISIKVSERNGDVIGAIQVETTDQIMMITDAGTLVRTRVSEVSV 827
Query: 825 MGRSTQGVILITVENKSKLCGVQRLC 850
+GR+TQGV LI K+ G+QR+
Sbjct: 828 VGRNTQGVTLIRTTEDEKVVGLQRVA 853
>gi|398871473|ref|ZP_10626787.1| DNA gyrase, A subunit [Pseudomonas sp. GM74]
gi|398206029|gb|EJM92802.1| DNA gyrase, A subunit [Pseudomonas sp. GM74]
Length = 884
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/852 (51%), Positives = 633/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ + Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ GYGKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGYGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
N L G++R+
Sbjct: 829 ANDETLVGLERV 840
>gi|378774553|ref|YP_005176796.1| DNA gyrase subunit A [Pasteurella multocida 36950]
gi|356597101|gb|AET15827.1| DNA gyrase subunit A [Pasteurella multocida 36950]
Length = 893
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/875 (52%), Positives = 629/875 (71%), Gaps = 39/875 (4%)
Query: 6 KEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVK 65
+++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N +N+P+ K
Sbjct: 11 QDISPISIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYNKPYRK 70
Query: 66 CARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTEC 125
AR+VG+ + KYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGD+AAAMRYTE
Sbjct: 71 SARIVGDVISKYHPHGDRAVYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDAAAAMRYTEA 130
Query: 126 RLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPH 185
R+ KI++ELL DLDKET++F+ NYDG E+ P VLPT++P LL+NGSSGIAVGMATNIPPH
Sbjct: 131 RMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMATNIPPH 190
Query: 186 NLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAK 245
NL EV+DG L + N E SI++L+ IP PDFPTA +I G + + Y TG+G++ +RAK
Sbjct: 191 NLGEVLDGCLAYIENNEISIDELMTYIPGPDFPTAALINGRKGIEEAYKTGRGKIYVRAK 250
Query: 246 THIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVI 305
+E + T I++ E+PYQVNK L+EKI+ LVKEKK+E IS + D SDK GMRI I
Sbjct: 251 AEVETDEKGGET-IVVHEIPYQVNKAKLIEKIADLVKEKKVEGISAITDLSDKDGMRIEI 309
Query: 306 ELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRR 365
++KR+ + E+VLN LY TQLQ TFG+N++AL GQPKLLNLK+++ F+LHR+EV+ RR
Sbjct: 310 KIKRDAVGEVVLNNLYALTQLQVTFGINIVALDKGQPKLLNLKQLIEAFVLHRREVVTRR 369
Query: 366 TIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIG 425
T++ELRKARE AHILEGL IAL N+D I++IR+ P+ AK ++ W L VS+++
Sbjct: 370 TVYELRKARERAHILEGLAIALANVDPIIELIRNAPNPESAKRALLAQAWELGHVSQMLA 429
Query: 426 FNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKK 485
+ + +++ MY L+++QAQ IL + LQ+LTN+ +I+++Y+ ++
Sbjct: 430 ATGVDAARPEDLEEQYGIRDG-MYYLTEVQAQAILDLRLQKLTNLGHDEILDEYKKLLDV 488
Query: 486 VIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMV 545
+ +L IL + +R++E+I +EL I+ ++ + RR+EI ++ + + EDLIA +D+V
Sbjct: 489 IGELLHILRSPERLMEVIREELEQIREQF----NDPRRTEITASSADINLEDLIAQEDVV 544
Query: 546 ITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLY 605
+TLS+ GY+K QP+++Y AQ+RGG+GK A TK+ED+I +L +ANTHD ILCFS+ GRLY
Sbjct: 545 VTLSHEGYVKYQPLTDYEAQRRGGKGKSAAKTKEEDFIERLLVANTHDTILCFSSRGRLY 604
Query: 606 WLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVK 665
WLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+ GIVK
Sbjct: 605 WLKVYQLPQASRGARGRPIVNILPLDENERITAILPVTA----YEEDKFVVMATAGGIVK 660
Query: 666 KTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGR 725
K L+ FS PR +GIIA+NL +ED LIG +TDG +IMLFS G+ VRF+EN+VRAMGR
Sbjct: 661 KIALTEFSRPRSTGIIALNLRDEDELIGVDITDGQNEIMLFSAQGRVVRFSENAVRAMGR 720
Query: 726 SARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTA 757
+A GV G++L KV++L++ N+ ++LTA
Sbjct: 721 AATGVRGIKLALTNDLSDDESAVDMEEISDENTNDALDLNIDKVVSLVIPKNEG-AILTA 779
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
T+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RT
Sbjct: 780 TQNGYGKRTELAEYPTKSRNTKGVISIKVSERNGKVVAATQVEESDQIMLITDAGTLVRT 839
Query: 818 RVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RV+EI +GR+TQGV LI L G+QR+C +
Sbjct: 840 RVNEINIIGRNTQGVRLIRTSESETLVGLQRVCDV 874
>gi|398890631|ref|ZP_10644186.1| DNA gyrase, A subunit [Pseudomonas sp. GM55]
gi|398187897|gb|EJM75221.1| DNA gyrase, A subunit [Pseudomonas sp. GM55]
Length = 884
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/852 (51%), Positives = 634/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ + Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E G+GKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGFGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
N L G++R+
Sbjct: 829 ANDETLVGLERV 840
>gi|419953673|ref|ZP_14469816.1| DNA gyrase subunit A [Pseudomonas stutzeri TS44]
gi|387969362|gb|EIK53644.1| DNA gyrase subunit A [Pseudomonas stutzeri TS44]
Length = 935
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/886 (50%), Positives = 628/886 (70%), Gaps = 43/886 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ELL DLDKET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + SI++L+ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADISIDELMHYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++ALV+GQP+ LNLKE+L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALVDGQPRTLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKDALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL + L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPENLDPQYGLREG-RYFLSPEQAQAILDLRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+N R++E+I +EL +K +G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILAQIGELIRILTNPVRLMEVIREELENVKRDFG----DARRTEILESRLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVIL-----------PLSNNKRD 648
+ G++YWLK ++IP+ SR SRG+P++N+ L E+IT +L P + + D
Sbjct: 596 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAPEGDEELD 655
Query: 649 -------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAV 683
P Y+FM+T+ G VKKT L FS PR SG+IA+
Sbjct: 656 DDTQAIEHDEGDENDSEETDDDDRDEPTGAYIFMATAKGTVKKTPLVQFSRPRTSGLIAL 715
Query: 684 NLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIA 743
L D LI AA+TDG+ ++M+FSD GK +RF E VR MGR+ARGV GMRL + Q++I+
Sbjct: 716 KLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKEGKVRIMGRNARGVRGMRLLEGQRIIS 775
Query: 744 LLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYH 803
+L+ Q Q +LTA+E GYGKRT + E+ + RG +G+I++ TN+RNG +V A V
Sbjct: 776 MLIPEPQAQ-ILTASERGYGKRTAMAEFPRRGRGGQGVIAMVTNERNGPLVGAVQVLEGE 834
Query: 804 EIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLGKGEHLVGLERV 880
>gi|332306880|ref|YP_004434731.1| DNA gyrase subunit A [Glaciecola sp. 4H-3-7+YE-5]
gi|332174209|gb|AEE23463.1| DNA gyrase, A subunit [Glaciecola sp. 4H-3-7+YE-5]
Length = 897
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/871 (53%), Positives = 633/871 (72%), Gaps = 35/871 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MTDHAQEILPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DL+KET+DF+ NYDG E P VLPT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKISHELLADLEKETVDFVPNYDGTEFIPDVLPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G + ++ PE SI +L++ IP PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCIALIDKPELSIEELMEYIPGPDFPTAAFISGRKGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + T II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRARAEIEREDNGKET-IIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KRNE E++LN LY QTQ+Q FG+NM+AL QPK+ NL +IL F+LHR+E
Sbjct: 300 MRIVVEVKRNESGEVLLNHLYSQTQMQTVFGINMVALDKTQPKVFNLLDILKAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE AHILEGL IAL NID I +I+++ +P +AK + W L DV
Sbjct: 360 VVTRRTVFELKKARERAHILEGLAIALANIDPIIALIKASKSPSDAKISLTAQGWQLGDV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S+++ ++ N ++ + + + +Y L++ QAQ IL + L +LT +E +KI+++
Sbjct: 420 SEML---ERAGNDAARPDWLEPEFGIRDGLYYLTEQQAQAILDLRLNKLTGLEHEKILSE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L IL + +R++E+I +EL I++++G RR+EI + + EDL
Sbjct: 477 YKELLDLIAELLHILGSPERLMEVIREELEKIRDEFGDE----RRTEITAASHDIDIEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS GY+K Q +++Y +Q+RGG+GK A K+ED+I +L +ANTHD+ILCF
Sbjct: 533 IEREEVVVTLSREGYVKYQKLNDYESQRRGGKGKSATKMKEEDFIEKLLVANTHDHILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + YV M+
Sbjct: 593 STRGRLYWLKVYQLPLASRNARGRPIVNILPLEENERITAILPI----QEFEEGKYVLMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +S PR +GIIAVNL++ D LIG +TDGS DIMLFSD+GK VRFNE
Sbjct: 649 TANGTVKKTALVQYSRPRANGIIAVNLNDGDELIGVDITDGSSDIMLFSDAGKVVRFNEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+RL++ Q+V++L+V ++LTAT
Sbjct: 709 ARDSETGAVKIDPETGEEILALRPMGRTATGVRGIRLQEGQRVVSLIVPQGDG-AILTAT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENG+GKRT +++Y +R T+G++SIK ++RNGKVV A VN EIMLI+ G L+RTR
Sbjct: 768 ENGFGKRTPVEDYPAKSRATQGVVSIKVSERNGKVVGAVQVNESDEIMLISDQGTLVRTR 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
V E+ +GR+TQGV LI + G+QR+
Sbjct: 828 VGEVSTVGRNTQGVRLIRTGADEHVVGLQRI 858
>gi|333907590|ref|YP_004481176.1| DNA gyrase subunit A [Marinomonas posidonica IVIA-Po-181]
gi|333477596|gb|AEF54257.1| DNA gyrase, A subunit [Marinomonas posidonica IVIA-Po-181]
Length = 884
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/853 (52%), Positives = 627/853 (73%), Gaps = 18/853 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + +E E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MGELAKEIIPVSIENELKGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ LL+DL+KET+DF+ NYDG E P VLP R+P LL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRMEKISHHLLMDLEKETVDFVPNYDGTEFMPEVLPARVPGLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L V+ N + +I++LI+ IP PDFPT I G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLAVIDNNDITIDELIERIPGPDFPTGAFINGRAGIIEAYKTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ HIE+ + NR +I+ E+PYQ+NK ++EKI++LVK+KKLE IS LRDESDK G
Sbjct: 241 YMRARHHIEDMEKGNRQSIVFTEIPYQLNKAKVIEKIAELVKDKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E P++V+N ++ QTQLQ+ FGMNM+ALV+G+P+LLNLK+IL F+ HR+E
Sbjct: 301 MRIVIELRRGENPDVVVNNIFTQTQLQSVFGMNMVALVDGRPQLLNLKQILECFVKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL +AL NID I++IR++ T EAK K++ +W +V
Sbjct: 361 VVTRRTIFELRKARERGHILEGLAVALANIDRVIELIRNSPTSAEAKEKLVAESWQPGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ ++ + + ++++ + Y LS QAQ IL + L RLT +E +K++++
Sbjct: 421 MAML---ERAGSDACRPDDLAPEFGFVDGTYHLSPEQAQAILDLRLHRLTGLEHEKLMDE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y ++I + +L +ILSN R++E+I +EL ++ +G ++RR+EI+ + + + DL
Sbjct: 478 YRSLIDLIGELLEILSNPMRLMEVIREELEEVREMFG----DVRRTEILTSRQDLTIADL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I MV+T+S+ GY KSQP+ EY+AQ+RGGRGK A K+ED IN L + ++HD ++ F
Sbjct: 534 IDEAPMVVTISDTGYAKSQPLEEYKAQRRGGRGKSASAMKEEDHINHLLVTSSHDTVMLF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL-------SNNKRDFPK 651
+N+G++YWL+V++IP SR+S+G+PI+N+ L E ++ +LPL S+++ D +
Sbjct: 594 TNFGKVYWLRVFEIPVASRSSKGRPIVNLLPLAEGEHVSALLPLTAPEKNDSDDEEDVQE 653
Query: 652 -NNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSG 710
++Y+FM+T+ G VKKT + +F+ PR +G+IA+NL D L+G A T G DIML S SG
Sbjct: 654 ASSYIFMATANGTVKKTAMEHFARPRSTGLIALNLDETDALVGVAQTSGEDDIMLVSSSG 713
Query: 711 KAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKE 770
K +RF+E VRAMGR+A GV G+RL + KV++L+V + +VL A ENGYGKRTL+ +
Sbjct: 714 KTIRFSEGDVRAMGRTAAGVRGIRLGEGAKVVSLIVP-QEGAAVLMACENGYGKRTLVDD 772
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
+ + RG +G+I I+ + RNG VV AT V EIMLIT G L+RTRVSE+ GR+TQ
Sbjct: 773 FPVYGRGGQGVIGIQVSDRNGPVVGATQVEETDEIMLITDQGTLVRTRVSEVSCQGRNTQ 832
Query: 831 GVILITVENKSKL 843
GV LI + N L
Sbjct: 833 GVTLIRLTNDEHL 845
>gi|395499788|ref|ZP_10431367.1| DNA gyrase subunit A [Pseudomonas sp. PAMC 25886]
Length = 884
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/850 (51%), Positives = 632/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I+ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEDRVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVD----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ + +LTA+ GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIP-EEGSEILTASARGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|398868651|ref|ZP_10624047.1| DNA gyrase, A subunit [Pseudomonas sp. GM78]
gi|398232864|gb|EJN18816.1| DNA gyrase, A subunit [Pseudomonas sp. GM78]
Length = 884
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/852 (51%), Positives = 634/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ + Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I +D V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEDRVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHFIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E G+GKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGFGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
N L G++R+
Sbjct: 829 ANDETLVGLERV 840
>gi|426408270|ref|YP_007028369.1| DNA gyrase subunit A [Pseudomonas sp. UW4]
gi|426266487|gb|AFY18564.1| DNA gyrase subunit A [Pseudomonas sp. UW4]
Length = 884
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/852 (51%), Positives = 633/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ + Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E G+GKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGFGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
L G++R+
Sbjct: 829 AKDETLVGLERV 840
>gi|109898785|ref|YP_662040.1| DNA gyrase subunit A [Pseudoalteromonas atlantica T6c]
gi|109701066|gb|ABG40986.1| DNA gyrase subunit A [Pseudoalteromonas atlantica T6c]
Length = 897
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/871 (53%), Positives = 631/871 (72%), Gaps = 35/871 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MTDHAQEILPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DL+KET+DF+ NYDG E P VLPT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKISHELLADLEKETVDFVPNYDGTEFIPDVLPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G + ++ PE SI +L++ IP PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCIALIDKPELSIEELMEYIPGPDFPTAAFISGRKGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + T I++ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRARAEIEREDNGKET-IVVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KRNE E++LN LY QTQ+Q FG+NM+AL QPK+ NL EIL F+LHR+E
Sbjct: 300 MRIVVEVKRNESGEVLLNHLYSQTQMQTVFGINMVALDKTQPKVFNLLEILQAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE AHILEGL IAL NID I +I+++ +P +AK + W L DV
Sbjct: 360 VVTRRTVFELKKARERAHILEGLAIALANIDPIIALIKASKSPSDAKISLTAQGWALGDV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S ++ ++ N ++ + + + +Y L++ QAQ IL + L +LT +E +KI+++
Sbjct: 420 SDML---ERAGNDAARPDWLEPEFGIRDGLYYLTEQQAQAILDLRLNKLTGLEHEKILSE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L IL + +R++E+I +EL I++++G RR+EI + + EDL
Sbjct: 477 YKELLDLIAELLHILGSPERLMEVIREELEKIRDEFGDE----RRTEITAASHDIDIEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS GY+K Q +++Y +Q+RGG+GK A K+ED+I +L +ANTHD+ILCF
Sbjct: 533 IEREEVVVTLSREGYVKYQKLNDYESQRRGGKGKSATKMKEEDFIEKLLVANTHDHILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + YV M+
Sbjct: 593 STRGRLYWLKVYQLPLASRNARGRPIVNILPLEANERITAILPI----QEFEEGKYVLMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L +S PR +GIIAVNL++ D LIG +TDGS DIMLFSD+GK VRFNE
Sbjct: 649 TANGTVKKTALVQYSRPRANGIIAVNLNDGDELIGVDITDGSSDIMLFSDAGKVVRFNEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+RL+ QKV++L+V ++LTAT
Sbjct: 709 ARDSETGAVKIDPETGEEILALRPMGRTATGVRGIRLQDGQKVVSLIVPQGDG-AILTAT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENG+GKRT +++Y +R T+G++SIK ++RNGKVV A VN EIMLI+ G L+RTR
Sbjct: 768 ENGFGKRTPVEDYPAKSRATQGVVSIKVSERNGKVVGAVQVNDSDEIMLISDQGTLVRTR 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
V E+ +GR+TQGV LI + G+QR+
Sbjct: 828 VGEVSTVGRNTQGVRLIRTGEDEHVVGLQRI 858
>gi|398952124|ref|ZP_10674586.1| DNA gyrase, A subunit [Pseudomonas sp. GM33]
gi|398155621|gb|EJM44060.1| DNA gyrase, A subunit [Pseudomonas sp. GM33]
Length = 884
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/852 (51%), Positives = 633/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ + Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E G+GKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGFGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
L G++R+
Sbjct: 829 AKDETLVGLERV 840
>gi|375266040|ref|YP_005023483.1| DNA gyrase subunit A [Vibrio sp. EJY3]
gi|369841361|gb|AEX22505.1| DNA gyrase subunit A [Vibrio sp. EJY3]
Length = 877
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/855 (53%), Positives = 626/855 (73%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEAITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADI-ETEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I +IR TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGIRDGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILA 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I +EL +++ + RR+EI + + E+
Sbjct: 476 EYKELLDEIAELMHILASTERLMEVIREELEAVRDGFADE----RRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y +Q+RGG+GK A KDED I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHGGYVKYQVLSDYESQRRGGKGKSATKMKDEDHIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L++ E+IT IL + +F ++ ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEDGERITAILRVD----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRF+E
Sbjct: 648 ATGDGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFSE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L + +V++L+V +N+ +LT TENGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLGEDDQVVSLIVPSNEG-DILTVTENGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E+M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ +I
Sbjct: 827 AEDETVVGLQRIDEI 841
Score = 47.0 bits (110), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 107/228 (46%), Gaps = 15/228 (6%)
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
D + + + G +K P++++ A R G A+ +D+D + + I N I+
Sbjct: 637 DEFSEDKFIFMATGDGTVKKTPLNQF-ANVRS-NGLIAVNLRDDDSLIGVDITNGDSDIM 694
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
FS G++ ++ R + G + M ++ + +++I+P +N+ D +
Sbjct: 695 LFSKAGKVVRFSEDKVRAMGRTAAG--VRGMKLGEDDQVVSLIVP--SNEGD------IL 744
Query: 657 MSTSLGIVKKTLLSNFSNPRKS--GIIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAV 713
T G K+T L+ + ++ G++++ +S + ++GA + ++M+ +D+G V
Sbjct: 745 TVTENGYGKRTELAEYPTKGRATQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAGTLV 804
Query: 714 RFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENG 761
R V +GR+ +GV +R + + V+ L + + + L E G
Sbjct: 805 RTRVAEVSQVGRNTQGVTLIRTAEDETVVGLQRIDEIEDADLPEGEEG 852
>gi|398859094|ref|ZP_10614776.1| DNA gyrase, A subunit [Pseudomonas sp. GM79]
gi|398237707|gb|EJN23453.1| DNA gyrase, A subunit [Pseudomonas sp. GM79]
Length = 889
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/850 (51%), Positives = 631/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKETD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ G+GKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGFGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|389681086|ref|ZP_10172431.1| DNA gyrase, A subunit [Pseudomonas chlororaphis O6]
gi|388554622|gb|EIM17870.1| DNA gyrase, A subunit [Pseudomonas chlororaphis O6]
Length = 889
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/857 (51%), Positives = 636/857 (74%), Gaps = 11/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQHIPGPDFPTAAIINGREGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VMTMVERAGADSCRPENLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 ANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGYGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + N
Sbjct: 771 GVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAN 830
Query: 840 KSKLCGVQRLCKITMIK 856
L G++R+ + + ++
Sbjct: 831 DETLVGLERVQEPSEVE 847
>gi|395798593|ref|ZP_10477877.1| DNA gyrase subunit A [Pseudomonas sp. Ag1]
gi|421143528|ref|ZP_15603467.1| DNA gyrase subunit A [Pseudomonas fluorescens BBc6R8]
gi|395337328|gb|EJF69185.1| DNA gyrase subunit A [Pseudomonas sp. Ag1]
gi|404505219|gb|EKA19250.1| DNA gyrase subunit A [Pseudomonas fluorescens BBc6R8]
Length = 887
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/850 (51%), Positives = 632/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I+ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEDRVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVD----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ + +LTA+ GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIP-EEGSEILTASARGYGKRTAISEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|398973360|ref|ZP_10684319.1| DNA gyrase, A subunit [Pseudomonas sp. GM25]
gi|398143076|gb|EJM31958.1| DNA gyrase, A subunit [Pseudomonas sp. GM25]
Length = 887
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/852 (51%), Positives = 634/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ + Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
L G++R+
Sbjct: 829 AKDETLVGLERV 840
>gi|63259384|gb|AAY40350.1| DNA gyrase subunit A [Edwardsiella tarda]
Length = 878
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/871 (52%), Positives = 633/871 (72%), Gaps = 13/871 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDRAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P VLPT++PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + +I L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDENITIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE ++ R I++ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YVRARAEIEVDDKNGRETIVVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + VLN LY QTQ+Q +FG+NM+AL GQPKLL+LKE L F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGRGVLNNLYTQTQMQVSFGINMVALHQGQPKLLDLKECLEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR TP EAK ++ W L +V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALVNIDPIIELIRRAPTPAEAKAALVSQAWALGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLARAGDDAARPEWLEPQYGIRDGH-YHLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ L IL + +R++E+I +EL I+ ++G + RR+EI N + + EDLI
Sbjct: 480 ALLEQIAALIFILQSPERLMEVIREELIAIREQFG----DARRTEITANTADINIEDLIE 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED I++L +ANTHD ILCF +
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDLIDRLLVANTHDTILCFFS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+YW+K++Q+ SR +RG+PIIN+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRMYWMKMYQLAGASRGARGRPIINLLPLEADERITAILPV----REYAEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVN + D LIG LTDG+ ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRAAGIIAVNPNYGDELIGVDLTDGNDEVMLFSVAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L + +V++L+V + + ++LT T+NGYGKR+ + EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGEDRVVSLIVPHGEG-AILTVTQNGYGKRSGVAEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK +RNG VV A V +IM+IT G L+RTRVSE+ +G +TQGVILI
Sbjct: 771 VISIKVTERNGSVVGAVQVEDCDQIMMITDAGTLVRTRVSEVSIVGCNTQGVILIRTAED 830
Query: 841 SKLCGVQRLCKITMIKKYIPVITIDGPTASG 871
+ G+QR+ + + + +IDG A G
Sbjct: 831 EHVVGLQRVVEPVDDED---LDSIDGSAAEG 858
>gi|378949567|ref|YP_005207055.1| DNA gyrase subunit A [Pseudomonas fluorescens F113]
gi|359759581|gb|AEV61660.1| DNA gyrase subunit A [Pseudomonas fluorescens F113]
Length = 889
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/852 (51%), Positives = 633/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ GYGKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGYGKRTAISEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N RNG++V A V EIMLI+ G L+RTRV+E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
+ L G++R+
Sbjct: 829 ASDETLVGLERV 840
>gi|213417579|ref|ZP_03350721.1| DNA gyrase subunit A [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 817
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/827 (54%), Positives = 620/827 (74%), Gaps = 10/827 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++ L+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHGLMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVK+K++E IS LRDESDK G
Sbjct: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L IAL NID I++IR TP EAK +I W+L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDGQYY-LTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL ++ R++E+I +E+ +I++++G RR+EI N+ + + EDLI+
Sbjct: 480 ELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDE----RRTEITANSADINIEDLIS 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+
Sbjct: 536 QENVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYW+KV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+ R++ + VFM+T+
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPV----REYEEGVNVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ FS PR +GIIAVNL++ D LIG LT GS ++MLFS +GK VRF E++V
Sbjct: 652 SGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++L KV++L++ + ++LT T+NGYGKRT EY +R T+G
Sbjct: 712 RAMGRTATGVRGIKLAGDDKVVSLIIPRGEG-AILTVTQNGYGKRTAADEYPTKSRATQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGR 827
+ISIK +RNG VV A V+ +IM+IT G L+RTRVSEI +GR
Sbjct: 771 VISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGR 817
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 651 KNNYVFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDFLIGAALTDGSYDIMLFSD 708
+ N V + G VK L+++ R+ G A + EDF+ + + I+ FS
Sbjct: 536 QENVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSS 595
Query: 709 SGKAVRFNENSVRAMGRSARG---VIGMRLEKKQKVIALLVSNNQKQ--SVLTATENGYG 763
G+ + R ARG V + LE +++ A+L ++ +V AT +G
Sbjct: 596 RGRLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGVNVFMATASGTV 655
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
K+T + E+++ + GII++ N + +++ L + E+ML + G ++R + +R
Sbjct: 656 KKTALTEFSRPR--SAGIIAVNLNDGD-ELIGVDLTSGSDEVMLFSAAGKVVRFKEDAVR 712
Query: 824 KMGRSTQGVILITVENKSKLCGV 846
MGR+ GV I + K+ +
Sbjct: 713 AMGRTATGVRGIKLAGDDKVVSL 735
>gi|357417252|ref|YP_004930272.1| DNA gyrase subunit A [Pseudoxanthomonas spadix BD-a59]
gi|355334830|gb|AER56231.1| DNA gyrase subunit A [Pseudoxanthomonas spadix BD-a59]
Length = 902
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/887 (52%), Positives = 628/887 (70%), Gaps = 50/887 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A E+I + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+ N
Sbjct: 1 MADLATEIIPVNLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 RPHFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE+EPSV+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFTPNYDEKEQEPSVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG++ ++ NP I+ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLSEVIDGLIAMIDNPLIEIDQLLEYIPGPDFPTAGIINGTAGIIAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E +R R AII+ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RMRARAEVEVDDRSGREAIIVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY QT +++ FG+NM+ALV+G+P+LLNLK++L F+ HR+E
Sbjct: 301 MRIYIEVKRGESAEVVLNNLYSQTPMESVFGINMVALVDGRPQLLNLKQMLEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++IR+++ P EA+ +++ TW V
Sbjct: 361 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIRTSANPGEARERMLARTWEPGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ S+ ++ K + Y+L++ QAQ+IL+M L RLT +EQ+K+ +
Sbjct: 421 GSLLAAAGSES---SRPEDLPKGVGFLDGRYQLTETQAQQILEMRLHRLTGLEQEKLTEE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTED 537
Y+ +++ + L IL N + ++I +EL +K ++G +++ IR+SE + + D
Sbjct: 478 YKLLLETIAGLIRILQNPDVLKQVIREELLNVKEEFGDARRSQIRQSEEDFDIL-----D 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +DMV+TLS+ GY K QP S YRAQKRGGRG+ A TK+ED+I+ L++ NTHD +L
Sbjct: 533 LIAPEDMVVTLSHAGYAKRQPASSYRAQKRGGRGRNAATTKEEDFIDHLWLVNTHDTLLT 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F++ GR++WL V Q+P+ N+RG+PI+N L+ EK+ +LP+ R++ + +VF
Sbjct: 593 FTSKGRVFWLAVHQLPEAGPNARGRPIVNWIPLEADEKVQAVLPV----REYAEGRFVFF 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E
Sbjct: 649 ATRNGTVKKTPLTEFAYRLARGKIAINLDQGDALVGVALTDGQRDVLLFASNGKTVRFGE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLV------------------------------- 746
+VR+MGR+A GV G+RL + + V++L+V
Sbjct: 709 EAVRSMGRTATGVRGIRLARGEHVVSLIVADRAAGADADQTDDEVADADEALEAAAEDTV 768
Query: 747 -SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
+Q +S +LTATENGYGKRT + EY + RGT+G+I I+TN RNGK+V A L+
Sbjct: 769 LETSQDESGCYILTATENGYGKRTALAEYPRKGRGTQGVIGIQTNARNGKLVGALLLGNS 828
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
E+MLI+ GG L+RTR +EI ++GR+TQGV LI + KL ++RL
Sbjct: 829 DEVMLISDGGTLVRTRSTEISRVGRNTQGVTLIRLSKGEKLQAIERL 875
>gi|387119988|ref|YP_006285871.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans D7S-1]
gi|415758947|ref|ZP_11481647.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans D17P-3]
gi|416031381|ref|ZP_11572480.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|348001799|gb|EGY42529.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|348655191|gb|EGY70667.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans D17P-3]
gi|385874480|gb|AFI86039.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 887
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/880 (52%), Positives = 633/880 (71%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +++ + LEEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE NL+N
Sbjct: 1 MSDLIQDITPVSLEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNLYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEMIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI++ VK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIAEFVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRKAPNPENAKRELLARPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 ADMLAASGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLDAIGKLLYILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGARGRPIVNILPLNENERITAILPVAA----YEEDKFVVMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E++V
Sbjct: 651 GGIVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLSDDESAVEIEDVSDDNAEETLDLNIDKVVSLVIPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G
Sbjct: 771 -ILTATQNGYGKRTKLDEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C++
Sbjct: 830 TLVRTRVSEVSIVGRNTQGVRLIRTSEAEHVVSLERICEV 869
>gi|330808287|ref|YP_004352749.1| DNA gyrase subunit A [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423696077|ref|ZP_17670567.1| DNA gyrase, A subunit [Pseudomonas fluorescens Q8r1-96]
gi|327376395|gb|AEA67745.1| DNA topoisomerase (ATP-hydrolyzing) (DNA gyrase subunit A)
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|388003589|gb|EIK64916.1| DNA gyrase, A subunit [Pseudomonas fluorescens Q8r1-96]
Length = 887
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/852 (51%), Positives = 633/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ GYGKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGYGKRTAISEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N RNG++V A V EIMLI+ G L+RTRV+E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
+ L G++R+
Sbjct: 829 ASDETLVGLERV 840
>gi|238898606|ref|YP_002924287.1| DNA gyrase (type II topoisomerase), subunit A [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229466365|gb|ACQ68139.1| DNA gyrase (type II topoisomerase), subunit A [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 844
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/859 (53%), Positives = 619/859 (72%), Gaps = 24/859 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+Q AKE+I I +E+E+ SYL+YAMSVI+GRALPDVRDG KPVHRRVL+AM + N WN
Sbjct: 1 MSQLAKEIIPINIEQELTDSYLEYAMSVIIGRALPDVRDGFKPVHRRVLYAMKVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YDA+VRMAQ FSLR LVDGQGNFGS+DGDS AAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDAIVRMAQPFSLRYMLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++E+L DLDK+T++F+ NYD E+ P V+PT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHEILADLDKDTVNFVPNYDETEQIPEVMPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN++EVI L + + S+ L+K +P PDFPTAGIIYG + Y TG+GR+
Sbjct: 181 NIPPHNISEVIAACLAYIDDENISVEHLMKHMPGPDFPTAGIIYGSKGIEQAYGTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +IE + R +II+DE+PYQVNK L+EKI++LVKEK+LE IS LRDESDK G
Sbjct: 241 YIRAKANIEVDEKSGRQSIIVDEIPYQVNKTKLIEKIAELVKEKRLEGISCLRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI+IELKR+ I E++LN+LY TQLQ +FG+NM+AL +GQPK++ LK+IL FI HR+E
Sbjct: 301 MRILIELKRDAIAEVILNQLYSLTQLQVSFGINMVALDHGQPKVMTLKDILRAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILE L +AL NID IQ+IR+ P +AK ++ W L V
Sbjct: 361 VVTRRTLFELRKARDRAHILEALAVALANIDVIIQLIRNAGNPTQAKTGLLAQAWPLGHV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQ--------NNDMYKLSDIQAQEILKMPLQRLTNMEQ 472
+ ++ + + +I++ + +N Y ++ QAQ IL + LQ+LT +E
Sbjct: 421 TSML-------DCVGDEKDIARPEWLEARFGIHNGEYHFTEQQAQAILDLRLQKLTGLEH 473
Query: 473 KKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAIN 532
++N+Y+ ++ + +L ILS+ R++E+I +E IK +Y + RR+EI +N +
Sbjct: 474 DNLLNEYKELLNAIHELQKILSDPDRLLEVIREEFLSIKAQY----HDPRRTEIKINTAD 529
Query: 533 PSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
EDLI +D+V+TLS+ GYIK QP+S+Y AQ RGG+GK A TKDED+I +L +ANTH
Sbjct: 530 IHLEDLIPQEDVVVTLSHQGYIKYQPLSDYEAQHRGGKGKSAARTKDEDFIERLLVANTH 589
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
D ILCFS+ GRLYWLKV+Q+P+ SR SRG+PI+N+ L E+IT ILP+ N +
Sbjct: 590 DNILCFSSRGRLYWLKVYQLPEASRGSRGRPIVNLLPLNPDERITAILPIKN----YETG 645
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVFM+T+ G+VKK L FS PR +GI +NL + D LIG LTDG+ ++MLFS GK
Sbjct: 646 QYVFMATACGVVKKIALLEFSRPRSTGIYTLNLDDGDELIGVDLTDGTNEVMLFSSKGKV 705
Query: 713 VRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYT 772
+RF+E+ VRAMGR+ARGV G+RL ++ +V++L++ +LT T NGYGK+T +EY
Sbjct: 706 IRFSEDDVRAMGRTARGVGGIRLAQEDRVVSLIIPRGDG-DILTVTANGYGKKTSKEEYP 764
Query: 773 KHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGV 832
+R G+ISIK N RNG VV A V+ +M+IT G L+RTR SE+ + R+T+GV
Sbjct: 765 TRSRNGMGVISIKVNGRNGNVVGAIQVDENDHLMMITDAGTLVRTRASEMNSISRNTKGV 824
Query: 833 ILITVENKSKLCGVQRLCK 851
LI +N K+ G+QRL +
Sbjct: 825 TLIRTQNNEKVVGLQRLVE 843
>gi|70731664|ref|YP_261406.1| DNA gyrase subunit A [Pseudomonas protegens Pf-5]
gi|68345963|gb|AAY93569.1| DNA gyrase, A subunit [Pseudomonas protegens Pf-5]
Length = 889
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/856 (51%), Positives = 634/856 (74%), Gaps = 11/856 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGREGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VMTMVERAGADSCRPENLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +LP+ ++ + +Y+FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDEGEYITTMLPVE----EYTEGHYIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 ANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E G+GKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLAEGQKLISMLIPEEGSQ-ILTASERGFGKRTAIGEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRLCKITMI 855
L G++R+ + + I
Sbjct: 831 DETLVGLERVQEPSEI 846
>gi|425900782|ref|ZP_18877373.1| DNA gyrase, A subunit [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397883248|gb|EJK99734.1| DNA gyrase, A subunit [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 889
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/857 (51%), Positives = 636/857 (74%), Gaps = 11/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQHIPGPDFPTAAIINGREGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VMTMVERAGADSCRPENLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 ANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGYGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRLCKITMIK 856
L G++R+ + + ++
Sbjct: 831 DETLVGLERVQEPSEVE 847
>gi|398995409|ref|ZP_10698293.1| DNA gyrase, A subunit [Pseudomonas sp. GM21]
gi|398130001|gb|EJM19353.1| DNA gyrase, A subunit [Pseudomonas sp. GM21]
Length = 884
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/850 (51%), Positives = 630/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSTIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKETD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ G+GKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGFGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|359784364|ref|ZP_09287536.1| DNA gyrase subunit A [Halomonas sp. GFAJ-1]
gi|359298324|gb|EHK62540.1| DNA gyrase subunit A [Halomonas sp. GFAJ-1]
Length = 901
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/879 (51%), Positives = 634/879 (72%), Gaps = 41/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ + +E+E+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAMHE+ N WN
Sbjct: 1 MGDIAREILPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMHELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQHFSMRHVLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ELL DL+K+T+D++ NYDG E+ P+V+PT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMARLAHELLADLEKDTVDWVDNYDGTERIPAVMPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EVIDG L ++ + +++DL++ IP PDFPT GII G + + D Y TG+GR+
Sbjct: 181 NIPPHNMREVIDGCLALIDDYTLTVDDLMQYIPGPDFPTGGIINGRAGILDAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA IE ++ R III ELPYQVNK L+EKI++LVKEKK+E I+ LRDESDK G
Sbjct: 241 YVRACHTIEHHDKSGRDHIIISELPYQVNKARLIEKIAELVKEKKIEGIAELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE+KR E E+V+N L+ QTQLQN FG+NM+AL NGQP+ LNLKE+L FI HR+E
Sbjct: 301 LRVVIEVKRGESGEVVVNNLFAQTQLQNVFGINMVALENGQPRTLNLKEMLEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++EL+KARE H+LEGL +A++NID I++I+++ EA+ K++ W V
Sbjct: 361 VVTRRTLYELKKARERGHLLEGLAVAISNIDEVIELIKASPNAAEAREKLLAKIWQPGQV 420
Query: 421 SKIIGFNKKNYNTISKINNISKL----QNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
+ ++ ++ T K ++ + + Y+LS QAQ IL++ L RLT +E +K++
Sbjct: 421 TAML---ERAGATSCKPEDLDEGFGLNPSATEYRLSHAQAQAILELRLHRLTGLETEKLL 477
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
++Y +++K+ + T IL++ R++E+I +EL+ ++ +YG + RR+EI + ++ S E
Sbjct: 478 SEYLTILEKIAEFTAILASPDRLMEVIREELHAVREQYG----DDRRTEIQASHLDLSIE 533
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLIA +DMV+T+S GY K+QP+S+Y+AQ+RGGRGK A KDED I L +A+THD +L
Sbjct: 534 DLIAEEDMVVTVSRSGYAKTQPLSDYQAQRRGGRGKSATSMKDEDVIEHLLVASTHDTVL 593
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
FSN G++YWLKV+++P SR SRGKP++NM L+ E + ILP+ RD+ +Y+F
Sbjct: 594 LFSNRGKVYWLKVYEMPNASRGSRGKPLVNMLPLEEGEAVNAILPV----RDYDPEHYIF 649
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
+T+ G VK+T L FS PR G+IA++L D L+GAA+T G+ ML S +GKA+RF
Sbjct: 650 FATANGTVKRTSLEQFSRPRSVGLIAIDLEESDRLVGAAITSGADHAMLLSSNGKAIRFE 709
Query: 717 ENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQK---------------------QS-- 753
E +VRAMGR+ARGV GMRL K +VI+L++ +Q+ QS
Sbjct: 710 EGNVRAMGRTARGVRGMRLAKNAEVISLIIPKSQQIDAEADAEADVEQQVEPQEQIQSEG 769
Query: 754 ---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITT 810
++TA+ENGYGKRT ++E+ RG +G+I+++T++RNG +VAA V E+MLIT
Sbjct: 770 QIYIMTASENGYGKRTRLEEFPLRGRGGQGVIAMQTSERNGSLVAAMQVYDSDEMMLITD 829
Query: 811 GGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
G L+RTRV E+ R+TQGV+LI + + KL R+
Sbjct: 830 RGTLVRTRVEEVSTTSRNTQGVMLIRLGKEEKLVKTVRV 868
Score = 47.4 bits (111), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 574 AMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNK 633
A+ ++ D + I + D+ + S+ G+ + + R +RG + M KN
Sbjct: 675 AIDLEESDRLVGAAITSGADHAMLLSSNGKAIRFEEGNVRAMGRTARG--VRGMRLAKNA 732
Query: 634 EKITVILPLSNN------------KRDFPKNN-------YVFMSTSLGIVKKTLLSNFS- 673
E I++I+P S ++ P+ Y+ ++ G K+T L F
Sbjct: 733 EVISLIIPKSQQIDAEADAEADVEQQVEPQEQIQSEGQIYIMTASENGYGKRTRLEEFPL 792
Query: 674 -NPRKSGIIAVNLSNED-FLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVI 731
G+IA+ S + L+ A S ++ML +D G VR V R+ +GV+
Sbjct: 793 RGRGGQGVIAMQTSERNGSLVAAMQVYDSDEMMLITDRGTLVRTRVEEVSTTSRNTQGVM 852
Query: 732 GMRLEKKQKVIALLVSNNQKQSVLTATENG 761
+RL K++K++ + + +S A E G
Sbjct: 853 LIRLGKEEKLVKTVRVDEPGESDFEALEEG 882
>gi|406903917|gb|EKD45850.1| hypothetical protein ACD_69C00107G0002 [uncultured bacterium]
Length = 857
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/840 (54%), Positives = 627/840 (74%), Gaps = 15/840 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+Q+AKE+ I +E+E+ +SYL YAMSVIV RALPDVRDGLKPVHRRVL+AM+E N +N
Sbjct: 1 MSQYAKEITLINIEDELKQSYLAYAMSVIVSRALPDVRDGLKPVHRRVLYAMYEQGNEYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ MGKYHPH D++IYD +VRMAQSFSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARIVGDVMGKYHPHSDIAIYDTIVRMAQSFSLRYPLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL+KI++ LL DLDKET+DF NYDG E P VLP +PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHFLLNDLDKETVDFAPNYDGSEFAPLVLPASLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVID + V+ PE + DLIKIIP PDFPTAGII G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVIDACIAVIDKPEIELWDLIKIIPGPDFPTAGIINGRAGIEQAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+R++ IE+ N + AIII+ELPYQVNK +L+ +I++LVKEKK+E I+ +RDESDK
Sbjct: 241 SVRSRVTIEDDESSNDKQAIIINELPYQVNKAALIVRIAELVKEKKIEGITAIRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E++LN L+ TQ+Q TFG+N++AL GQPK LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVAEVILNNLFIDTQMQVTFGINIVALDGGQPKTLNLKQLLDAFLNHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RR +FEL++ARE AHILEGL +A+ NID I +I+ + P AK +++ W+
Sbjct: 361 EVVTRRCLFELKQARERAHILEGLGVAIANIDEIIALIKKSKNPATAKQELLSHVWHTGP 420
Query: 420 VSKIIGFNKKNYNTISKINNISK--LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
V ++ ++ IS+ + K ++D Y+LS+ QAQ IL + L RLT +EQ KI+N
Sbjct: 421 VKAML---EQTGADISRPEGLDKNFGLSSDGYRLSETQAQAILDLRLHRLTGLEQDKILN 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ + L DIL NSK ++++I EL I+N + RR+EII + + ED
Sbjct: 478 EYKELLDNIKVLIDILGNSKLLLDVIRKELLEIRNLFADK----RRTEIIEAQEDLTHED 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIAS+D+V+TLS+ GY K Q I++Y+AQ+RGGRGK A K+ED++ +LFIANTHD +LC
Sbjct: 534 LIASEDVVVTLSHEGYAKIQAITDYQAQRRGGRGKTATGIKEEDFVERLFIANTHDTMLC 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FSN G++YWLKV+ +PQGSR +RGKP++N+ L+ E+I ILP+ R++ NNY+FM
Sbjct: 594 FSNRGKVYWLKVYLLPQGSRTARGKPLVNLLPLEEGERINTILPI----REYTANNYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKK L +FSNPR +GIIA++LS D LIGAA+TDG ++MLFSD+GKAVRF+E
Sbjct: 650 ATAFGTVKKVGLEHFSNPRSNGIIALDLSPGDNLIGAAITDGKQEVMLFSDAGKAVRFDE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VRAMGR+A GV GMR++ QK+I+L++ +++L ATENGYGKRT + ++ NRG
Sbjct: 710 GQVRAMGRTAHGVRGMRIKDGQKIISLIIV-KPDEAILIATENGYGKRTAVTDFPNVNRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I+++ ++RNGK V+A V EIMLI+ G L+R RV E+ +GR+TQGV LI +
Sbjct: 769 AQGVIAVQVSERNGKAVSAIQVCAGSEIMLISNQGTLVRIRVDEVSLIGRNTQGVKLINL 828
>gi|399010545|ref|ZP_10712914.1| DNA gyrase, A subunit [Pseudomonas sp. GM17]
gi|398106623|gb|EJL96646.1| DNA gyrase, A subunit [Pseudomonas sp. GM17]
Length = 889
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/857 (51%), Positives = 636/857 (74%), Gaps = 11/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQHIPGPDFPTAAIINGREGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VMTMVERAGADSCRPENLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 ANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGYGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRLCKITMIK 856
L G++R+ + + ++
Sbjct: 831 DETLVGLERVQEPSEVE 847
>gi|398964533|ref|ZP_10680351.1| DNA gyrase, A subunit [Pseudomonas sp. GM30]
gi|398148251|gb|EJM36935.1| DNA gyrase, A subunit [Pseudomonas sp. GM30]
Length = 884
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/852 (51%), Positives = 633/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
L G++R+
Sbjct: 829 AKDETLVGLERV 840
>gi|77460299|ref|YP_349806.1| DNA gyrase subunit A [Pseudomonas fluorescens Pf0-1]
gi|77384302|gb|ABA75815.1| DNA gyrase subunit A [Pseudomonas fluorescens Pf0-1]
Length = 887
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/850 (51%), Positives = 633/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESTA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPENLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +Y+FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHYIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 ANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 771 GVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAK 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|398899113|ref|ZP_10648801.1| DNA gyrase, A subunit [Pseudomonas sp. GM50]
gi|398183204|gb|EJM70698.1| DNA gyrase, A subunit [Pseudomonas sp. GM50]
Length = 889
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/850 (51%), Positives = 629/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKETD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ G+GKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGFGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|209695246|ref|YP_002263175.1| DNA gyrase subunit A [Aliivibrio salmonicida LFI1238]
gi|208009198|emb|CAQ79452.1| DNA gyrase subunit A [Aliivibrio salmonicida LFI1238]
Length = 885
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/852 (53%), Positives = 622/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AK + + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 7 MSDLAKGITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMDVLGNDWN 66
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 67 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 126
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 127 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTRVPNLLVNGSSGIAVGMAT 186
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L + N + +I++LI IP PDFPTA +I G + D Y TG+G+V
Sbjct: 187 NIPPHNLTEVVNGCLAFIENEDITIDELINYIPGPDFPTAALISGRKGIVDAYKTGRGKV 246
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K +IE ++ + II+ E+PYQVNK ++EKI++LVK+KK+E IS LRDESDK G
Sbjct: 247 YMRSKANIEA-DKNGKETIIVTEIPYQVNKARVIEKIAELVKDKKVEGISALRDESDKDG 305
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN L+ TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 306 MRIVIECKRDAVGEVVLNNLFSLTQLQTTFGVNMVALDNGQPKLFNLKEMLKCFVDHRRE 365
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL +AL NID I +I++ +P EAK ++ W+L +V
Sbjct: 366 VVTRRTIFELRKARDRAHILEGLALALANIDEIIDLIKNAPSPAEAKQGLVARGWDLGNV 425
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I + Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 426 ADMLERAGTDAARPDWLEPEFGIREGQ----YFLTEQQAQAILELRLHRLTGLEHEKILD 481
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++EII DEL +++ YG RR+EI + ED
Sbjct: 482 EYKALLDEIAELMHILASTERLMEIIRDELITVRDTYGDE----RRTEIGAAIHDIDIED 537
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K Q + +Y AQ+RGG+GK A KD D+I +L +ANTHD ILC
Sbjct: 538 LITQEDVVVTLSREGYVKYQILGDYEAQRRGGKGKSATKMKDTDYIERLLVANTHDNILC 597
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+PQ SR +RGKPI+N+ L+ E+IT ILP+S ++ ++ ++FM
Sbjct: 598 FSTRGKAYSLKVFQLPQASRTARGKPIVNILPLEEGERITAILPVS----EYSEDKFIFM 653
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+ R +G+IAVNL +D LIG +T GS +IMLFS +GK VRF+E
Sbjct: 654 ATGDGTVKKTSLDQFAKVRANGLIAVNLREDDSLIGVDITTGSNEIMLFSKAGKVVRFSE 713
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VR MGR+A GV GM+L + +V++L+V +N+ +LT TENGYGKRT I EY +R
Sbjct: 714 EHVRGMGRTASGVRGMKLTGEDQVVSLIVPSNEG-DILTVTENGYGKRTKISEYPTKSRA 772
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK + RNG VV A E M+IT G L+RTRVSE+ ++GR+TQGV LI
Sbjct: 773 TQGVVSIKVSDRNGSVVGAVQAEDGDEFMMITDAGTLVRTRVSEVSQVGRNTQGVTLIRT 832
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 833 AEDENVVGLQRI 844
>gi|407365598|ref|ZP_11112130.1| DNA gyrase subunit A [Pseudomonas mandelii JR-1]
Length = 889
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/850 (51%), Positives = 631/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVD----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI A++TDGS ++MLFSD GK RF E
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISASITDGSREVMLFSDGGKVTRFKETD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ G+GKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGFGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|398938563|ref|ZP_10667917.1| DNA gyrase, A subunit [Pseudomonas sp. GM41(2012)]
gi|398165604|gb|EJM53719.1| DNA gyrase, A subunit [Pseudomonas sp. GM41(2012)]
Length = 885
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/850 (51%), Positives = 630/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVD----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKETD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ G+GKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGFGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|416077184|ref|ZP_11585770.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|444337514|ref|ZP_21151469.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|348004117|gb|EGY44644.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|443546807|gb|ELT56409.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
Length = 887
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/880 (52%), Positives = 632/880 (71%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +++ + LEEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE NL+N
Sbjct: 1 MSDLIQDITPVSLEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNLYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEMIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI+ VK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIADFVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRKAPNPENAKRELLTHPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 ADMLAASGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLDAIGKLLYILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGARGRPIVNILPLNENERITAILPVAA----YEEDKFVVMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E++V
Sbjct: 651 GGIVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLNDDESAVEIEDVSDDNAEETLDLNIDKVVSLVIPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G
Sbjct: 771 -ILTATQNGYGKRTKLDEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C++
Sbjct: 830 TLVRTRVSEVSIVGRNTQGVRLIRTSEAEHVVSLERICEV 869
>gi|41639|emb|CAA68611.1| gyrase alpha subunit [Escherichia coli]
Length = 878
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/887 (52%), Positives = 640/887 (72%), Gaps = 26/887 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L + D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHE---IMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+ISIK +RNG VV A V+ + IM+IT G L+RTRVSEI +GR+TQGVILI
Sbjct: 771 VISIKVTERNGLVVGAVQVDDCDQIMMIMMITDAGTLVRTRVSEISIVGRNTQGVILIRT 830
Query: 838 ENKSKLCGVQRLCKITMIKKYIPV-----ITIDGPTASGKGTVAQLV 879
+ G+QR+ + PV TIDG A G +A V
Sbjct: 831 AEDENVVGLQRVAE--------PVDEEDLDTIDGSAAEGDDEIAPEV 869
>gi|398839971|ref|ZP_10597211.1| DNA gyrase, A subunit [Pseudomonas sp. GM102]
gi|398111559|gb|EJM01441.1| DNA gyrase, A subunit [Pseudomonas sp. GM102]
Length = 889
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/850 (51%), Positives = 629/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKETD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ G+GKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGFGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|431927117|ref|YP_007240151.1| DNA gyrase subunit A [Pseudomonas stutzeri RCH2]
gi|431825404|gb|AGA86521.1| DNA gyrase subunit A [Pseudomonas stutzeri RCH2]
Length = 936
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/887 (49%), Positives = 633/887 (71%), Gaps = 44/887 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVI+GRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + +I++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++GQP+ LNLKE+L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGQPRTLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIAVIKASPTPAEAKDALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEGLDPQFGLRDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+N R++E+I +EL +K +G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILTQIGELIRILTNPVRLMEVIREELEGVKRDFG----DARRTEILESRLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL----------------- 642
+ G++YWLK ++IP+ SR SRG+P++N+ L E+IT +L +
Sbjct: 596 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGEDDLD 655
Query: 643 --------------------SNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIA 682
++++D P +Y+FM+T+ G VKKT L FS PR SG+IA
Sbjct: 656 DAEGLVIEHDDADEVESDDADSDEKDEPTGSYIFMATANGTVKKTPLVQFSRPRTSGLIA 715
Query: 683 VNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVI 742
+ L D LI AA+TDG+ ++M+FSD GK +RF E+ VR MGR+ARGV GMRL + Q++I
Sbjct: 716 LKLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLPEGQRII 775
Query: 743 ALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
++L+ Q +LTA+ GYGKRT ++E+ + RG +G+I++ TN+RNG +V A V
Sbjct: 776 SMLIPETGAQ-ILTASVRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGPLVGAVQVLEG 834
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERV 881
>gi|415770373|ref|ZP_11484790.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans D17P-2]
gi|444346988|ref|ZP_21154940.1| DNA gyrase, A subunit [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|348656821|gb|EGY74425.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans D17P-2]
gi|443541094|gb|ELT51578.1| DNA gyrase, A subunit [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 887
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/880 (52%), Positives = 632/880 (71%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +++ + LEEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE NL+N
Sbjct: 1 MSDLIQDITPVSLEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNLYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEMIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI+ VK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIADFVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRKAPNPENAKRELLTHPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 ADMLAASGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLDAIGKLLYILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGARGRPIVNILPLNENERITAILPVAA----YEEDKFVVMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E++V
Sbjct: 651 GGIVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLNDDESAVEIEDVSDDNAEETLDLNIDKVVSLVIPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G
Sbjct: 771 -ILTATQNGYGKRTKLDEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C++
Sbjct: 830 TLVRTRVSEVSIVGRNTQGVRLIRTSEAEHVVSLERICEV 869
>gi|406937288|gb|EKD70788.1| hypothetical protein ACD_46C00397G0005 [uncultured bacterium]
Length = 847
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/852 (53%), Positives = 623/852 (73%), Gaps = 13/852 (1%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
N AK+V + +E E+ KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+ N WN+
Sbjct: 3 NSIAKDVQKVSVENELKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGNDWNK 62
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAMR
Sbjct: 63 SYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYLLVDGQGNFGSIDGDAAAAMR 122
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+++ ++ LL D++KET+DF+ NYD E P+VLPTR+PNLL+NGSSGIAVGMATN
Sbjct: 123 YTEIRMSRFAHALLADIEKETVDFVPNYDETENAPTVLPTRVPNLLVNGSSGIAVGMATN 182
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLTEVID + ++ NPE ++ DL+ IP PDFPTAGII G + +++ Y+TG+GR++
Sbjct: 183 IPPHNLTEVIDACVALIDNPELTVVDLMGYIPGPDFPTAGIIQGKNGIYEAYHTGRGRLV 242
Query: 242 IRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGM 301
+RAKTHIE + N+ II+ ELPYQ+NK L+E+I++LVKEKKLE IS LRDESDK GM
Sbjct: 243 VRAKTHIEVDEKSNKERIIVTELPYQINKAKLVERIAELVKEKKLEGISALRDESDKQGM 302
Query: 302 RIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEV 361
R+VIEL+R E +++LN L+ QTQLQ+ +G+NM+ALV+GQPK+LNLK+++ +FI HR+EV
Sbjct: 303 RVVIELRRGENIDVILNNLFVQTQLQSVYGINMVALVDGQPKVLNLKQLIDFFIRHRREV 362
Query: 362 IKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVS 421
+ RRT+F+L+KAR+ HILEGL IAL+NID I +I+ EAK++++ W
Sbjct: 363 VTRRTMFDLKKARDRVHILEGLAIALSNIDAMILLIKQAKDSAEAKSQLMSRIWQAVQTI 422
Query: 422 KIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYEN 481
+I+ +++ I+ + L + + Y+LS QAQ IL M L RLT +EQ KII +++
Sbjct: 423 EIL-TRAGSHDAITHVTETYGL-SAEGYRLSPEQAQAILDMRLHRLTGLEQGKIIAEHKE 480
Query: 482 VIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEII-LNAINPSTEDLIA 540
+ + +L IL + ++++ +I DEL IKN +G + RR+EII + EDLI
Sbjct: 481 LQILISELMAILQHPEKLMHVIRDELTAIKNDFG----DARRTEIIETDEGEVLIEDLIP 536
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+++V+TLS+ GY+K+Q +S Y+AQ RGGRGK A K+ED++ L A THD ILCF+
Sbjct: 537 DEEVVVTLSHEGYVKTQLLSVYQAQHRGGRGKTATTMKEEDYVEFLIAARTHDTILCFTT 596
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+Q PQ +R SRGKPIIN+ L E++ LP+ R++ +N YV +TS
Sbjct: 597 QGKVYWLKVYQFPQANRTSRGKPIINLLPLAEGERVNAFLPV----REYLENQYVVFATS 652
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G++KK L +FS PR SGIIA+ L+ D+L+ A +TDG +DIMLF+D+GK VRF E+ V
Sbjct: 653 KGLIKKVSLVDFSRPRSSGIIAIALNEGDYLVQADITDGEHDIMLFTDAGKVVRFPESKV 712
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR A GV G++L+ Q+V++L+V+ + ++LTATENGYGKRT I EY RG +G
Sbjct: 713 RCMGRQAAGVRGVKLQDDQRVVSLVVARD--GAILTATENGYGKRTAIDEYRLSGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI N+RNGKVV A VN E+MLI+ G L+R +EI +GR+TQGV LI +
Sbjct: 771 VISIHVNERNGKVVGAIQVNEEDEVMLISNKGTLVRVPAAEISLIGRNTQGVRLIQLSEG 830
Query: 841 SKLCGVQRLCKI 852
L ++R+ I
Sbjct: 831 ESLVSLERIINI 842
>gi|416068782|ref|ZP_11582907.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|348000690|gb|EGY41464.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
Length = 887
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/880 (51%), Positives = 632/880 (71%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +++ + LEEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE NL+N
Sbjct: 1 MSDLIQDITPVSLEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNLYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEMIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI++ VK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIAEFVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRKAPNPENAKRELLARPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 ADMLAASGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLDAIGKLLYILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGARGRPIVNILPLNENERITAILPVAA----YEEDKFVVMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E++V
Sbjct: 651 GGIVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLSDDESAVEIEDVSDDNAEETLDLNIDKVVSLVIPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LT T+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G
Sbjct: 771 -ILTTTQNGYGKRTKLDEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C++
Sbjct: 830 TLVRTRVSEVSIVGRNTQGVRLIRTSEAEHVVSLERICEV 869
>gi|423096554|ref|ZP_17084350.1| DNA gyrase, A subunit [Pseudomonas fluorescens Q2-87]
gi|397885985|gb|EJL02468.1| DNA gyrase, A subunit [Pseudomonas fluorescens Q2-87]
Length = 887
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/859 (51%), Positives = 636/859 (74%), Gaps = 15/859 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSTIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATAKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ GYGKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGYGKRTAIGEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRLCKITMIK 856
+ L G++R+ + + ++
Sbjct: 829 ASDETLVGLERVQEPSEVE 847
>gi|71737548|ref|YP_275809.1| DNA gyrase subunit A [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71558101|gb|AAZ37312.1| DNA gyrase, A subunit [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 928
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/885 (51%), Positives = 638/885 (72%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSETEEERKACIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLSEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|333893161|ref|YP_004467036.1| DNA gyrase subunit A [Alteromonas sp. SN2]
gi|332993179|gb|AEF03234.1| DNA gyrase, A subunit [Alteromonas sp. SN2]
Length = 898
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/873 (54%), Positives = 639/873 (73%), Gaps = 39/873 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A E++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MSDNANEILPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG E P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHELLADLDKETVDFVPNYDGTEHIPEVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G + ++ +P +I+DL+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCIALIKDPSITIDDLMLHIPGPDFPTAAMISGRKGIDDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + T III+E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YMRAKAEIETEDNGKET-IIINEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KRNE E++LN LY TQLQ FG+NM+AL NGQPK+ NLKE L FILHR+E
Sbjct: 300 MRIVVEVKRNESAEVLLNHLYANTQLQTVFGINMVALDNGQPKVFNLKETLEAFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL IAL NID I++I+++ P +AK ++ W+L DV
Sbjct: 360 VVTRRTVFELRKARDRAHILEGLAIALANIDPIIELIKASPGPADAKKALVAQGWDLGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S+++ G + + + I Q Y L++ QAQ IL + L RLT +E +KI+
Sbjct: 420 SQMLERAGDDAARPDWLMPEFGIRDGQ----YFLTEQQAQAILDLRLHRLTGLEHEKILE 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++ + +L IL++ +R++E+I +EL I+ ++G + RR+EI + + ED
Sbjct: 476 EYKQLLEVIAELLHILNSPERLMEVIEEELEKIREEFG----DARRTEITAASHDIDIED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K Q +++Y +Q+RGGRGK A K+ED+I +L +ANTHD+ILC
Sbjct: 532 LIEQEDVVVTLSREGYVKYQKLNDYESQRRGGRGKSATKMKNEDFIEKLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SRN+RG+PI+N+ L++ E+IT ILP+ ++F + +V M
Sbjct: 592 FSTRGRLYWLKVYQLPLASRNARGRPIVNILPLEDNERITAILPI----KEFEEGKFVLM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS +S PR SGIIAVNL+ D LIG +T G DIMLFSD+GK VRFNE
Sbjct: 648 ATANGTVKKTDLSLYSRPRSSGIIAVNLNEGDELIGVDITHGDDDIMLFSDAGKVVRFNE 707
Query: 718 N--------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTA 757
++R MGR+A GV G+RL+ Q+V++L+V +LTA
Sbjct: 708 KLRDSETGNVKLDPETGEELLALRPMGRTATGVRGIRLQDDQRVVSLIVPRGDG-PILTA 766
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
TENG+GKRT +++Y +R T+G++SIK ++RNGKVV A V+ +EIMLI+ G L+RT
Sbjct: 767 TENGFGKRTPLEDYPAKSRATQGVVSIKVSERNGKVVGAVQVDEANEIMLISDQGTLVRT 826
Query: 818 RVSEIRKMGRSTQGVILI-TVENKSKLCGVQRL 849
RV E+ +GR+TQGV LI TVEN+ + G+QR+
Sbjct: 827 RVGEVSVVGRNTQGVRLIRTVENE-HVVGLQRI 858
>gi|424924251|ref|ZP_18347612.1| DNA gyrase, A subunit [Pseudomonas fluorescens R124]
gi|404305411|gb|EJZ59373.1| DNA gyrase, A subunit [Pseudomonas fluorescens R124]
Length = 884
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/852 (51%), Positives = 633/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVE----EYTEGHFIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+E GYGKRT I E+ ++ RG
Sbjct: 710 SDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASERGYGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
L G++R+
Sbjct: 829 AKDETLVGLERV 840
>gi|398879368|ref|ZP_10634463.1| DNA gyrase, A subunit [Pseudomonas sp. GM67]
gi|398196531|gb|EJM83532.1| DNA gyrase, A subunit [Pseudomonas sp. GM67]
Length = 884
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/850 (51%), Positives = 629/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEDRVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKETD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ G+GKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGFGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|218890640|ref|YP_002439504.1| DNA gyrase subunit A [Pseudomonas aeruginosa LESB58]
gi|386067186|ref|YP_005982490.1| DNA gyrase subunit A [Pseudomonas aeruginosa NCGM2.S1]
gi|218770863|emb|CAW26628.1| DNA gyrase subunit A [Pseudomonas aeruginosa LESB58]
gi|348035745|dbj|BAK91105.1| DNA gyrase subunit A [Pseudomonas aeruginosa NCGM2.S1]
Length = 923
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/889 (50%), Positives = 633/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + N D
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDE 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 656 AEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 776 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERV 883
>gi|422596367|ref|ZP_16670649.1| DNA gyrase subunit A [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330986666|gb|EGH84769.1| DNA gyrase subunit A [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 928
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/885 (51%), Positives = 637/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + +N L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLNPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|398885427|ref|ZP_10640339.1| DNA gyrase, A subunit [Pseudomonas sp. GM60]
gi|398192555|gb|EJM79704.1| DNA gyrase, A subunit [Pseudomonas sp. GM60]
Length = 884
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/850 (51%), Positives = 629/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEDRVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 652 AKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGDREVMLFSDGGKVTRFKETD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ G+GKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGFGKRTAITEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNDRNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|451987913|ref|ZP_21936064.1| DNA gyrase subunit A [Pseudomonas aeruginosa 18A]
gi|451754460|emb|CCQ88587.1| DNA gyrase subunit A [Pseudomonas aeruginosa 18A]
Length = 923
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/889 (50%), Positives = 633/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL-------SNNKRDF--- 649
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + + D+
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDYLDE 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 656 AEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 776 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERV 883
>gi|409426088|ref|ZP_11260654.1| DNA gyrase subunit A [Pseudomonas sp. HYS]
Length = 879
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/850 (51%), Positives = 634/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + ++++L++ IP PDFPTA II G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADITVDELMQFIPGPDFPTAAIINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I++ ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMVEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLKE+L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRVLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADSCRPENLDPQFGLRDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL++++R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSAERLMEVIREELELIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I+ L +AN+H +L FS
Sbjct: 536 PEEDRVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYISHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L E I+ +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDEGEYISTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD+GK RF E+
Sbjct: 652 ANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDAGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++++ Q +LTA+E GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLAEGQKLISMIIPEEGSQ-ILTASERGYGKRTEIGEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNERNGRLVGAVQVQDGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|238020191|ref|ZP_04600617.1| hypothetical protein GCWU000324_00066 [Kingella oralis ATCC 51147]
gi|237868585|gb|EEP69589.1| hypothetical protein GCWU000324_00066 [Kingella oralis ATCC 51147]
Length = 915
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/891 (53%), Positives = 633/891 (71%), Gaps = 50/891 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
+QFAKE I++ LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+ N WN
Sbjct: 7 HQFAKETIAVSLEDEMKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELKNNWNS 66
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K ARVVG+ +GKYHPHGD ++Y +VRMAQ FSLR LVDGQGNFGS+DGD+AAAMR
Sbjct: 67 AYKKSARVVGDVIGKYHPHGDSAVYQTIVRMAQPFSLRYMLVDGQGNFGSVDGDAAAAMR 126
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E+EP VLPTR P LL+NGS GIAVGMATN
Sbjct: 127 YTEIRMAKIAHEMLADIEEETVNFGDNYDGSEQEPLVLPTRFPALLVNGSEGIAVGMATN 186
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ I L++LH PE IN+LI II APDFPT IYGL+ V GY TG+GRV+
Sbjct: 187 IPPHNLSDTISACLHLLHQPEADINELIDIIKAPDFPTGATIYGLTGVRAGYQTGRGRVV 246
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTH+E + R AII+DE+PYQVNK L+EKI +LV+EK +E I+ LRDESDK G
Sbjct: 247 IRAKTHLEPIGKSGEREAIIVDEIPYQVNKAKLVEKIGELVREKTIEGIAELRDESDKDG 306
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
RIVIELKRNE E++LN+LYK TQLQ+TFG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 307 TRIVIELKRNENAEVILNQLYKLTQLQDTFGINMVALVDGQPRLLNLKQILSEFLRHRRE 366
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I +I+++S + A+ ++ W V
Sbjct: 367 VVTRRTLFRLKKARAEGHIAEGKAVALSNIDEMIALIKASSDVEAAREALLGRAWQSSLV 426
Query: 421 SKIIGFNKKNYNTISK--INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S+++G + + + LQ D Y LSD QA+ IL+M L+ LT ++Q +I+ +
Sbjct: 427 SEMLGRSDLDLTQARPEWLPENRGLQ-ADGYWLSDEQARAILRMSLRNLTGLDQDEIVKE 485
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEI-ILNAINPSTED 537
Y+ ++ ++DL DIL+ +R+ +II DEL +K+++G RRSEI + + ED
Sbjct: 486 YKELMAIIVDLLDILAKPERVRQIIEDELVEMKSQFGDE----RRSEINAFGGGDIADED 541
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +DMV+TL++ GYIK+QP S+Y+AQ+RGGRGK+A TKDED+I LFIANTHDY++C
Sbjct: 542 LIPPRDMVVTLTHGGYIKTQPTSDYQAQRRGGRGKQAAATKDEDFIETLFIANTHDYLMC 601
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N GR +W+KV+++P+G RNSRG+PI N+ L EK++ ILP+ R+FP+N YVF
Sbjct: 602 FTNLGRCHWIKVYRLPEGGRNSRGRPINNVIQLDENEKVSAILPV----REFPENEYVFF 657
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+LG+VKK LS F N GI A+ L D LIGA T G+ DIMLFS+ GKA+RFNE
Sbjct: 658 ATALGMVKKVQLSAFKNVSSKGIKAIALKEGDSLIGAVKTSGADDIMLFSNLGKALRFNE 717
Query: 718 ------------------------------------NSVRAMGRSARGVIGMRLEKKQKV 741
N VR GR + G+ GMRL + ++
Sbjct: 718 YWAGKADAADEDDSELEAEMQPENDADNETAAPKSGNGVRPSGRGSGGLRGMRLPENGRI 777
Query: 742 IALLVSN-NQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
++LLV+ N VLTAT NGYGKRT I +Y + +G +G I+I T +RNG +VAATLV+
Sbjct: 778 VSLLVAQKNCGLQVLTATANGYGKRTPIDDYPRKGKGGQGNIAINTGERNGDLVAATLVS 837
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
++MLIT+GG+LIRT+V ++R+ GR+ GV LI ++ + L ++ + +
Sbjct: 838 PNDDLMLITSGGVLIRTKVEQVRETGRTAAGVKLINLDEGTTLVSIEPVVE 888
>gi|329894505|ref|ZP_08270319.1| DNA gyrase subunit A [gamma proteobacterium IMCC3088]
gi|328923030|gb|EGG30355.1| DNA gyrase subunit A [gamma proteobacterium IMCC3088]
Length = 858
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/857 (52%), Positives = 630/857 (73%), Gaps = 16/857 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MGELAKEIFPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ +L DLDKET+DF+ NYDG EK P+VLPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMRKIAHAMLADLDKETVDFVDNYDGTEKIPAVLPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+TEV+ + +L+NPE +I++L++ IP PDFPT II G + + Y TG+GR+
Sbjct: 181 NIPPHNMTEVVSACMALLNNPEITIDELMEHIPGPDFPTGAIISGRAGILQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK + +NR III E+PYQ+NK L+E+I++LVKEKK+E IS LRDESDK G
Sbjct: 241 YVRAKAEVITDEAKNRDTIIIHEIPYQLNKARLIERIAELVKEKKIEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIELKR E+ ++VLN LY QTQLQ+ FG+NM+AL NGQPK++NLKEI+ F+ HR+E
Sbjct: 301 LRVVIELKRGEMGDVVLNNLYAQTQLQSVFGINMVALENGQPKVMNLKEIIDAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ LRKARE H+LEGL IAL NID I++I+++ +P +A+ ++ W+ DV
Sbjct: 361 VVTRRTIYLLRKARERGHLLEGLAIALANIDPIIELIKNSPSPADAREGLLAKVWSPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ ++ + + L + MY+LS QAQ IL++ L RLT +E +K++N+Y+
Sbjct: 421 VAMLEQAGEDACRPDGLEDHYGLHDG-MYRLSPAQAQAILELRLHRLTGLEHEKLLNEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+K++ D IL +S R+ ++I +EL + ++G R +EI+ + + S EDLI
Sbjct: 480 EKLKEIADYLHILGDSDRLKQVIREELEEVVEEFGDE----RLTEIVDSQHDLSVEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+T+S+ GY K+QP+S+Y+AQ+RGG GK A KDED++ L +A+TH ILCF+N
Sbjct: 536 PEDRVVTISHGGYAKTQPLSDYQAQRRGGMGKSATAVKDEDFVEHLLVASTHSTILCFTN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+QIP R SRG+P++N+ L E++T ILP++ ++ +++Y+FM+T+
Sbjct: 596 LGKVYWLKVYQIPVAGRQSRGRPMVNLLPLDPGERVTSILPVA----EYTEDHYIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKKT L++FS PR G+ A+ L+ +D L+G A+T G D+ML S +GKAVRF E V
Sbjct: 652 KGIVKKTALTDFSRPRSVGLRALELAEDDVLVGTAITHGESDVMLMSSAGKAVRFAEQDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+R+ + ++IAL++ + VLTA+ NGYGK+T+ E+ + RGTKG
Sbjct: 712 RPMGRTARGVRGIRMGDEDEMIALIIP-QEGSYVLTASANGYGKKTMASEFPRKGRGTKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I++ TN RNG +V A V E+MLI+ G ++RTRVSEI +GR+TQGV +I
Sbjct: 771 VIAMVTNDRNGPLVGAVQVGEADELMLISNQGTMVRTRVSEISTLGRNTQGVRVI----- 825
Query: 841 SKLCGVQRLCKITMIKK 857
+L + L +IT I++
Sbjct: 826 -RLKEGEELVRITQIEE 841
>gi|339494300|ref|YP_004714593.1| DNA gyrase subunit A [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338801672|gb|AEJ05504.1| DNA gyrase subunit A [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 935
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/886 (50%), Positives = 631/886 (71%), Gaps = 43/886 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVI+GRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDKET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + +I++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++ALV+GQP+ LNLKE+L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALVDGQPRTLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKDALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VEAMVERAGADACRPENLDPQYGLRDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+N R++E+I +EL +K +G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILTQIGELIRILTNPVRLMEVIREELEGVKRDFG----DARRTEILESRLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS---------------- 643
+ G++YWLK ++IP+ SR SRG+P++N+ L E+IT +L +
Sbjct: 596 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGDEELD 655
Query: 644 --------------------NNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAV 683
++++D P Y+FM+T+ G VKKT L FS PR SG+IA+
Sbjct: 656 DAEGLVIEHDDIDDVEGDDDSDEKDEPTGAYIFMATAKGTVKKTPLVQFSRPRTSGLIAL 715
Query: 684 NLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIA 743
L D LI AA+TDG+ ++M+FSD GK +RF E+ VR MGR+ARGV GMRL + Q++I+
Sbjct: 716 KLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLPEGQRIIS 775
Query: 744 LLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYH 803
+L+ Q +LTA+ GYGKRT ++E+ + RG +G+I++ TN+RNG +V A V
Sbjct: 776 MLIPEPDAQ-ILTASVRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGPLVGAVQVLEGE 834
Query: 804 EIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERV 880
>gi|15598364|ref|NP_251858.1| DNA gyrase subunit A [Pseudomonas aeruginosa PAO1]
gi|254236130|ref|ZP_04929453.1| DNA gyrase subunit A [Pseudomonas aeruginosa C3719]
gi|254241856|ref|ZP_04935178.1| DNA gyrase subunit A [Pseudomonas aeruginosa 2192]
gi|313108480|ref|ZP_07794484.1| DNA gyrase subunit A [Pseudomonas aeruginosa 39016]
gi|355641001|ref|ZP_09051988.1| DNA gyrase subunit A [Pseudomonas sp. 2_1_26]
gi|386057871|ref|YP_005974393.1| DNA gyrase subunit A [Pseudomonas aeruginosa M18]
gi|416863902|ref|ZP_11915390.1| DNA gyrase subunit A [Pseudomonas aeruginosa 138244]
gi|416882244|ref|ZP_11921825.1| DNA gyrase subunit A [Pseudomonas aeruginosa 152504]
gi|418585270|ref|ZP_13149324.1| DNA gyrase subunit A [Pseudomonas aeruginosa MPAO1/P1]
gi|418591680|ref|ZP_13155573.1| DNA gyrase subunit A [Pseudomonas aeruginosa MPAO1/P2]
gi|421159448|ref|ZP_15618583.1| DNA gyrase subunit A [Pseudomonas aeruginosa ATCC 25324]
gi|421517698|ref|ZP_15964372.1| DNA gyrase subunit A [Pseudomonas aeruginosa PAO579]
gi|1346237|sp|P48372.1|GYRA_PSEAE RecName: Full=DNA gyrase subunit A
gi|9949285|gb|AAG06556.1|AE004741_1 DNA gyrase subunit A [Pseudomonas aeruginosa PAO1]
gi|459929|gb|AAA68625.1| gyrase A subunit [Pseudomonas aeruginosa PAO1]
gi|126168061|gb|EAZ53572.1| DNA gyrase subunit A [Pseudomonas aeruginosa C3719]
gi|126195234|gb|EAZ59297.1| DNA gyrase subunit A [Pseudomonas aeruginosa 2192]
gi|310880986|gb|EFQ39580.1| DNA gyrase subunit A [Pseudomonas aeruginosa 39016]
gi|334835213|gb|EGM14106.1| DNA gyrase subunit A [Pseudomonas aeruginosa 138244]
gi|334835261|gb|EGM14149.1| DNA gyrase subunit A [Pseudomonas aeruginosa 152504]
gi|347304177|gb|AEO74291.1| DNA gyrase subunit A [Pseudomonas aeruginosa M18]
gi|354831027|gb|EHF15056.1| DNA gyrase subunit A [Pseudomonas sp. 2_1_26]
gi|375044690|gb|EHS37284.1| DNA gyrase subunit A [Pseudomonas aeruginosa MPAO1/P1]
gi|375049490|gb|EHS41984.1| DNA gyrase subunit A [Pseudomonas aeruginosa MPAO1/P2]
gi|404347180|gb|EJZ73529.1| DNA gyrase subunit A [Pseudomonas aeruginosa PAO579]
gi|404547160|gb|EKA56174.1| DNA gyrase subunit A [Pseudomonas aeruginosa ATCC 25324]
Length = 923
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/889 (50%), Positives = 632/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + N D
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDE 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 656 AEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 776 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERV 883
>gi|21104366|dbj|BAB93453.1| DNA gyrase A [Actinobacillus actinomycetemcomitans]
Length = 887
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/880 (51%), Positives = 631/880 (71%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +++ + LEEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE NL+N
Sbjct: 1 MSDLIQDITPVSLEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNLYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEMIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI+ VK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIADFVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRKAPNPENAKRELLTHPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 ADMLAASGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLDAIGKLLYILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGARGRPIVNILPLNENERITAILPVAA----YEEDKFVVMTTA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E++V
Sbjct: 651 GGIVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLNDDESAVEIEDVSDDNAEETLDLNIDKVVSLVIPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+L AT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G
Sbjct: 771 -ILAATQNGYGKRTKLDEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C++
Sbjct: 830 TLVRTRVSEVSIVGRNTQGVRLIRTSEAEHVVSLERICEV 869
>gi|399002586|ref|ZP_10705269.1| DNA gyrase, A subunit [Pseudomonas sp. GM18]
gi|398124501|gb|EJM14009.1| DNA gyrase, A subunit [Pseudomonas sp. GM18]
Length = 889
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/852 (51%), Positives = 633/852 (74%), Gaps = 15/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ + Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSATRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ ++ + +++FM
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVE----EYTEGHFIFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E
Sbjct: 650 ATAKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGDREVMLFSDGGKVTRFKE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ G+GKRT I E+ ++ RG
Sbjct: 710 TDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGFGKRTAITEFPEYKRG 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI +
Sbjct: 769 GQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKL 828
Query: 838 ENKSKLCGVQRL 849
N L G++R+
Sbjct: 829 ANDETLVGLERV 840
>gi|421179678|ref|ZP_15637258.1| DNA gyrase subunit A, partial [Pseudomonas aeruginosa E2]
gi|404546790|gb|EKA55829.1| DNA gyrase subunit A, partial [Pseudomonas aeruginosa E2]
Length = 913
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/889 (50%), Positives = 632/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + N D
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDE 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 656 AEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 776 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERV 883
>gi|452749396|ref|ZP_21949160.1| DNA gyrase subunit A [Pseudomonas stutzeri NF13]
gi|452006731|gb|EMD98999.1| DNA gyrase subunit A [Pseudomonas stutzeri NF13]
Length = 936
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/887 (49%), Positives = 634/887 (71%), Gaps = 44/887 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVI+GRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + +I++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++GQP+ LNLKE+L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGQPRTLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKDALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEGLDPQFGLRDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+N R++E+I +EL +K +G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILTQIGELIRILTNPVRLMEVIREELEGVKRDFG----DARRTEILESRLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL----------------- 642
+ G++YWLK ++IP+ SR SRG+P++N+ L E+IT +L +
Sbjct: 596 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGEEDLD 655
Query: 643 --------------------SNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIA 682
++++D P +Y+FM+T+ G VKKT L FS PR SG+IA
Sbjct: 656 EAEGLVIEHDDTDEVESDDADSDEKDEPTGSYIFMATANGTVKKTPLVQFSRPRTSGLIA 715
Query: 683 VNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVI 742
+ L D LI AA+TDG+ ++M+FSD GK +RF E+ VR MGR+ARGV GMRL + Q++I
Sbjct: 716 LKLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLPEGQRII 775
Query: 743 ALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
++L+ + Q +LTA+ GYGKRT ++E+ + RG +G+I++ TN+RNG ++ A V
Sbjct: 776 SMLIPESGAQ-ILTASLRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGPLIGAVQVLEG 834
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERV 881
>gi|421166692|ref|ZP_15624927.1| DNA gyrase subunit A, partial [Pseudomonas aeruginosa ATCC 700888]
gi|404537411|gb|EKA47013.1| DNA gyrase subunit A, partial [Pseudomonas aeruginosa ATCC 700888]
Length = 919
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/889 (50%), Positives = 632/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + N D
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDE 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 656 AEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 776 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERV 883
>gi|365968070|ref|YP_004949632.1| DNA gyrase subunit A [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|416087755|ref|ZP_11587719.1| DNA gyrase, A subunit [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|444348677|ref|ZP_21156278.1| DNA gyrase, A subunit [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|348009623|gb|EGY49752.1| DNA gyrase, A subunit [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|365746983|gb|AEW77888.1| DNA gyrase subunit A [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|443546429|gb|ELT56090.1| DNA gyrase, A subunit [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 887
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/880 (51%), Positives = 631/880 (71%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +++ + LEEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE NL+N
Sbjct: 1 MSDLIQDITPVSLEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNLYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEMIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI+ VK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIADFVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q T G+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTLGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRKAPNPENAKRELLTHPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 ADMLAASGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLDAIGKLLYILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGARGRPIVNILPLNENERITAILPVAA----YEEDKFVVMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E++V
Sbjct: 651 GGIVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLNDDESAVEIEDVSDDNAEETLDLNIDKVVSLVIPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G
Sbjct: 771 -ILTATQNGYGKRTKLDEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C++
Sbjct: 830 TLVRTRVSEVSIVGRNTQGVRLIRTSEAEHVVSLERICEV 869
>gi|257485847|ref|ZP_05639888.1| DNA gyrase subunit A [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|416017879|ref|ZP_11564916.1| DNA gyrase subunit A [Pseudomonas syringae pv. glycinea str. B076]
gi|416028560|ref|ZP_11571505.1| DNA gyrase subunit A [Pseudomonas syringae pv. glycinea str. race
4]
gi|422683603|ref|ZP_16741862.1| DNA gyrase subunit A [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|320323352|gb|EFW79440.1| DNA gyrase subunit A [Pseudomonas syringae pv. glycinea str. B076]
gi|320327549|gb|EFW83561.1| DNA gyrase subunit A [Pseudomonas syringae pv. glycinea str. race
4]
gi|331012936|gb|EGH92992.1| DNA gyrase subunit A [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 928
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/885 (51%), Positives = 637/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|400406261|ref|YP_006589009.1| DNA gyrase, A subunit [secondary endosymbiont of Heteropsylla
cubana]
gi|400364514|gb|AFP85581.1| DNA gyrase, A subunit [secondary endosymbiont of Heteropsylla
cubana]
Length = 847
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/856 (55%), Positives = 622/856 (72%), Gaps = 21/856 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FA+E+ + +EEE+ +SYLDYAMSVIVGRALPDVRDGLKPVHRR+LFAM+ + N WN
Sbjct: 1 MSDFAREITPVNIEEELKRSYLDYAMSVIVGRALPDVRDGLKPVHRRILFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLIDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL+D+ KET+D++ NYDG E P V+PTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLVDMGKETVDYVLNYDGTETIPDVMPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + S+ DL+K I PDFPT G+I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAYIDDENISLEDLMKHITGPDFPTCGMINGSGGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA IE + R +II+E+PYQVNK L+EKI+ LVK K +E IS LRDESDK G
Sbjct: 241 YIRACASIENDTKSGREFLIINEIPYQVNKSRLIEKIADLVKGKGIEGISGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + +VLN LY TQLQ +FG+NM+AL GQPK L+LKEIL F+ HR+E
Sbjct: 301 MRIVIEIKRDAVGAVVLNNLYSLTQLQVSFGINMVALHQGQPKTLSLKEILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFE+RKARE AH++E + +AL NID I +IR T EAKN ++ +W +
Sbjct: 361 VVTRRTIFEVRKAREQAHLMEAVAVALLNIDQIINLIRQMPTSAEAKNALLMHSWEMNSF 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-----NNDMYKLSDIQAQEILKMPLQRLTNMEQKKI 475
S ++ + SKI L+ N Y LS+ QAQ IL LQ+LT++EQ+K+
Sbjct: 421 SPMLKYLG------SKIARPEWLKAECGIRNGTYHLSEKQAQVILNFRLQKLTSLEQRKL 474
Query: 476 INKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPST 535
+++Y+ ++ K+ +L++IL NS R+ E+I EL IK +Y + RR++II + N +T
Sbjct: 475 LSEYKELLFKINELSEILKNSNRLTEVIRQELCSIKEQY----NDPRRTKIIADTSNVNT 530
Query: 536 EDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYI 595
EDLI +++++TLS GY+K QP+ +Y Q+RGG+GK A K+ED+I+QL +ANTH+ I
Sbjct: 531 EDLINQENVIVTLSYQGYVKYQPLRDYEEQRRGGKGKSAASIKEEDFIDQLLVANTHETI 590
Query: 596 LCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYV 655
L FS+ GR+YW+KV+Q+P+ SR +RG+PIIN+ L++ E+IT ILP+ R + K ++V
Sbjct: 591 LLFSSRGRIYWMKVYQLPEASRGARGRPIINLLPLESNERITAILPV----RTYEKGSHV 646
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYD-IMLFSDSGKAVR 714
FM+TS G VKKT L FS PR +GIIA+NL D LIG LTDGS D +MLFS GK VR
Sbjct: 647 FMATSSGTVKKTPLVEFSRPRSAGIIAMNLDVGDELIGIDLTDGSNDEVMLFSAYGKVVR 706
Query: 715 FNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774
F EN VR+MGR+ARGV G+ L +V++L+V S+LT T+ GYGKRTL KEY
Sbjct: 707 FPENQVRSMGRTARGVRGINLALGDRVVSLIVPRGN-DSILTVTQYGYGKRTLQKEYPTK 765
Query: 775 NRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVIL 834
+R T+G+ISIK N+RNGKVV A VN +IMLIT G L+RTRVSEI +GR+T GV L
Sbjct: 766 SRSTQGVISIKVNERNGKVVCALEVNNSDQIMLITDAGTLVRTRVSEISIIGRNTHGVTL 825
Query: 835 ITVENKSKLCGVQRLC 850
I + K+ G+QR+
Sbjct: 826 IRTAQEEKVVGLQRVA 841
>gi|359396503|ref|ZP_09189554.1| DNA gyrase subunit A [Halomonas boliviensis LC1]
gi|357969181|gb|EHJ91629.1| DNA gyrase subunit A [Halomonas boliviensis LC1]
Length = 913
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/877 (50%), Positives = 632/877 (72%), Gaps = 36/877 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ + +E+E+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAMHE+ N WN
Sbjct: 1 MGDIAREILPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMHELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQHFSMRHVLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++ELL DL+K+T+D++ NYDG E+ P+VLPT+ PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSRLAHELLADLEKDTVDWVDNYDGTERIPAVLPTKTPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EVIDG L ++ + +++DL++ IP PDFPT II G + + Y TG+GR+
Sbjct: 181 NIPPHNMREVIDGCLALIDDYTLTVDDLMEYIPGPDFPTGAIINGRAGILSAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA IE ++ R III ELPYQVNK L+EKI++LVKEKK+E I+ LRDESDK G
Sbjct: 241 YVRACHTIEHHDKTGRDHIIITELPYQVNKARLIEKIAELVKEKKIEGIAELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE+KR E E+V+N L+ QTQLQN FG+NM+AL NGQP+ LNLKE+L FI HR+E
Sbjct: 301 LRVVIEIKRGESGEVVVNNLFAQTQLQNVFGINMVALENGQPRTLNLKEMLEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++EL+KARE H+LEGL +A++NID I++I+++ EA+ K++ TW V
Sbjct: 361 VVTRRTLYELKKARERGHLLEGLAVAISNIDEVIELIKASPNAAEAREKLLAKTWQPGQV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
+ ++ +++ L Y+LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 TAMLERAGATSCKPEELDEGFGLNTGATSYRLSPAQAQAILELRLHRLTGLETEKLLDEY 480
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
++++K+ +LT+IL+++ R++E+I +EL +++++G + RR+EI + ++ S EDLI
Sbjct: 481 LSILEKIAELTEILASADRLMEVIREELRAVRDQFG----DDRRTEIQASHLDLSIEDLI 536
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+T+S GY K+QP+S+Y+AQ+RGGRGK A KDED I L +A+THD +L FS
Sbjct: 537 AEEDMVVTVSRSGYAKTQPLSDYQAQRRGGRGKSATAMKDEDVIEHLLVASTHDTVLLFS 596
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G++YWLKV+++P SR SRGKP++NM L+ E + ILP+ RD+ +NY+F +T
Sbjct: 597 NRGKVYWLKVYEMPNASRGSRGKPLVNMLPLEEGEAVNAILPV----RDYNPDNYIFFAT 652
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VK+T L FS PR G+IA++L D L+GAA+T G+ ML S +GKA+RF E +
Sbjct: 653 AKGTVKRTSLEQFSRPRSVGLIAIDLEEGDRLVGAAITTGNDHAMLLSSNGKAIRFEEGN 712
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLV-----------------SNNQKQSV-------- 754
RAMGR+ARGV GMRL +VI+L++ +NQ+ +V
Sbjct: 713 ARAMGRTARGVRGMRLAGDAEVISLIIPKSQQIDAEADAESETQDSNQESAVAETADGQI 772
Query: 755 --LTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+TA+ENGYGKRT ++E+ RG +G+I+++T++RNG +VAA V E+MLIT G
Sbjct: 773 YIMTASENGYGKRTRLEEFPLRGRGGQGVIAMQTSERNGSLVAAMQVYDSDEMMLITDRG 832
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
L+RTRV E+ R+TQGV+LI + + KL R+
Sbjct: 833 TLVRTRVEEVSTTSRNTQGVMLIRLGKEEKLVKTVRV 869
>gi|261868281|ref|YP_003256203.1| DNA gyrase subunit A [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413613|gb|ACX82984.1| DNA gyrase, A subunit [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 887
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/880 (51%), Positives = 631/880 (71%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +++ + LEEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE NL+N
Sbjct: 1 MSDLIQDITPVSLEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNLYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEMIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI+ VK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIADFVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q T G+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTLGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRKAPNPENAKRELLTHPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 ADMLAASGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLDAIGKLLYILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGARGRPIVNILPLNENERITAILPVAA----YEEDKFVVMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E++V
Sbjct: 651 GGIVKKITLTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLNDDESAVEIEDVSDDNAEETLDLNIDKVVSLVIPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G
Sbjct: 771 -ILTATQNGYGKRTKLDEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITNAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C++
Sbjct: 830 TLVRTRVSEVSIVGRNTQGVRLIRTSEAEHVVSLERICEV 869
>gi|397687387|ref|YP_006524706.1| DNA gyrase subunit A [Pseudomonas stutzeri DSM 10701]
gi|395808943|gb|AFN78348.1| DNA gyrase subunit A [Pseudomonas stutzeri DSM 10701]
Length = 936
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/887 (50%), Positives = 631/887 (71%), Gaps = 44/887 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ELL DL KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARLAHELLADLHKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ SI++L+ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIANPDISIDELMTHIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSTIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++ALV+GQP+ LNLKE+L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALVDGQPRTLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKDALIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGRYY-LSPEQAQAILDLRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL++ R++E+I +EL +K ++G + RR+EI+ ++ + DLI
Sbjct: 480 QEILTQIGELIRILTSPVRLMEVICEELEGVKAEFG----DARRTEILEARLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS---------------- 643
+ G++YWLK ++IP+ SR SRG+P++N+ L + E IT +L +
Sbjct: 596 SKGKVYWLKTYEIPEASRASRGRPLVNLLPLDDGESITAMLQVDLEALRKQAPHDDEELD 655
Query: 644 ---------------------NNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIA 682
+++D P Y+FM+T+ G VKKT L FS PR SG+IA
Sbjct: 656 DADGQIIEHDEIDDVDSDDADGDEKDEPTGAYIFMATAKGTVKKTPLVQFSRPRSSGLIA 715
Query: 683 VNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVI 742
+ L D LI AA+TDG+ ++M+FSD GK +RF E+ VR MGR+ARGV GMRL + Q++I
Sbjct: 716 LRLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRMMGRTARGVRGMRLPEGQRII 775
Query: 743 ALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
++L+ Q +LTA+ GYGKRT ++E+ + RG +G+I++ TN+RNG +V A V
Sbjct: 776 SMLIPELGAQ-ILTASVRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGALVGAVQVLEG 834
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLGKNEHLVGLERV 881
>gi|289623731|ref|ZP_06456685.1| DNA gyrase subunit A [Pseudomonas syringae pv. aesculi str. NCPPB
3681]
gi|289648173|ref|ZP_06479516.1| DNA gyrase subunit A [Pseudomonas syringae pv. aesculi str. 2250]
gi|422581248|ref|ZP_16656391.1| DNA gyrase subunit A [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|298157294|gb|EFH98377.1| DNA gyrase subunit A [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|330866098|gb|EGH00807.1| DNA gyrase subunit A [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 928
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/885 (50%), Positives = 637/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSETEEERKVRIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|107102698|ref|ZP_01366616.1| hypothetical protein PaerPA_01003764 [Pseudomonas aeruginosa PACS2]
gi|116051157|ref|YP_790012.1| DNA gyrase subunit A [Pseudomonas aeruginosa UCBPP-PA14]
gi|296388348|ref|ZP_06877823.1| DNA gyrase subunit A [Pseudomonas aeruginosa PAb1]
gi|419752509|ref|ZP_14278916.1| DNA gyrase subunit A [Pseudomonas aeruginosa PADK2_CF510]
gi|421173640|ref|ZP_15631380.1| DNA gyrase subunit A [Pseudomonas aeruginosa CI27]
gi|115586378|gb|ABJ12393.1| DNA gyrase subunit A [Pseudomonas aeruginosa UCBPP-PA14]
gi|384401049|gb|EIE47405.1| DNA gyrase subunit A [Pseudomonas aeruginosa PADK2_CF510]
gi|404535569|gb|EKA45258.1| DNA gyrase subunit A [Pseudomonas aeruginosa CI27]
Length = 921
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/889 (50%), Positives = 632/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + N D
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDE 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 656 AEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 776 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERV 883
>gi|386020971|ref|YP_005938995.1| DNA gyrase subunit A [Pseudomonas stutzeri DSM 4166]
gi|327480943|gb|AEA84253.1| DNA gyrase subunit A [Pseudomonas stutzeri DSM 4166]
Length = 935
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/886 (50%), Positives = 631/886 (71%), Gaps = 43/886 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVI+GRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDKET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + +I++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++ALV+GQP+ LNLKE+L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALVDGQPRTLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKDALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VEAMVERAGADACRPENLDPQYGLRDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+N R++E+I +EL +K +G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILTQIGELIRILTNPVRLMEVIREELEGVKRDFG----DARRTEILESRLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS---------------- 643
+ G++YWLK ++IP+ SR SRG+P++N+ L E+IT +L +
Sbjct: 596 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGDEELD 655
Query: 644 --------------------NNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAV 683
++++D P Y+FM+T+ G VKKT L FS PR SG+IA+
Sbjct: 656 DAEGLVIEHDDVDDVEGDDDSDEKDEPTGAYIFMATAKGTVKKTPLVQFSRPRTSGLIAL 715
Query: 684 NLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIA 743
L D LI AA+TDG+ ++M+FSD GK +RF E+ VR MGR+ARGV GMRL + Q++I+
Sbjct: 716 KLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLPEGQRIIS 775
Query: 744 LLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYH 803
+L+ Q +LTA+ GYGKRT ++E+ + RG +G+I++ TN+RNG +V A V
Sbjct: 776 MLIPEPGAQ-ILTASVRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGPLVGAVQVLEGE 834
Query: 804 EIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERV 880
>gi|392421537|ref|YP_006458141.1| DNA gyrase subunit A [Pseudomonas stutzeri CCUG 29243]
gi|390983725|gb|AFM33718.1| DNA gyrase subunit A [Pseudomonas stutzeri CCUG 29243]
Length = 936
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/887 (49%), Positives = 634/887 (71%), Gaps = 44/887 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVI+GRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + +I++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++GQP+ LNLKE+L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGQPRTLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIAVIKASPTPAEAKDALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEGLDPQFGLRDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+N R++E+I +EL +K +G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILTQIGELIRILTNPVRLMEVIREELEGVKRDFG----DARRTEILESRLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS---------------- 643
+ G++YWLK ++IP+ SR SRG+P++N+ L E+IT +L +
Sbjct: 596 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGEDDLD 655
Query: 644 ---------------------NNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIA 682
++++D P +Y+FM+T+ G VKKT L FS PR SG+IA
Sbjct: 656 EAEGLVIEHDDADDVESDDADSDEKDEPTGSYIFMATANGTVKKTPLVQFSRPRTSGLIA 715
Query: 683 VNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVI 742
+ L D LI AA+TDG+ ++M+FSD GK +RF E+ VR MGR+ARGV GMRL + Q++I
Sbjct: 716 LKLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLPEGQRII 775
Query: 743 ALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
++L+ + Q +LTA+ GYGKRT ++E+ + RG +G+I++ TN+RNG ++ A V
Sbjct: 776 SMLIPESGAQ-ILTASLRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGPLIGAVQVLEG 834
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERV 881
>gi|261211022|ref|ZP_05925312.1| DNA gyrase subunit A [Vibrio sp. RC341]
gi|260839997|gb|EEX66597.1| DNA gyrase subunit A [Vibrio sp. RC341]
Length = 880
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/866 (53%), Positives = 623/866 (71%), Gaps = 28/866 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIEA-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRHAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +TDG DIMLFS SGK VRFNE
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIAVNLRDDDALIGVEITDGESDIMLFSKSGKVVRFNE 707
Query: 718 -----------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRT 766
VR MGR+A GV G++L + +V++L+V N +LT TENGYGKRT
Sbjct: 708 KPIEDEEGNTKGGVRPMGRTAAGVRGIKLVEGDQVVSLIVPKNDG-DILTVTENGYGKRT 766
Query: 767 LIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMG 826
+ EY +R T+G++SIK ++RNG VV A V E M+IT G L+RTRV+E+ ++G
Sbjct: 767 TLDEYPAKSRATQGVVSIKVSERNGSVVGAVQVTEGDEFMMITNAGTLVRTRVAEVSQVG 826
Query: 827 RSTQGVILITVENKSKLCGVQRLCKI 852
R+TQGV LI + G+QR+ +I
Sbjct: 827 RNTQGVTLIRTSEGESVVGLQRIDEI 852
>gi|163803514|ref|ZP_02197384.1| DNA gyrase, subunit A [Vibrio sp. AND4]
gi|159172690|gb|EDP57541.1| DNA gyrase, subunit A [Vibrio sp. AND4]
Length = 907
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/877 (52%), Positives = 630/877 (71%), Gaps = 42/877 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLVEVIDGCLAFINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L++AL NID I++I++ TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEALSLALANIDEVIELIKNAPTPAEAKIGLVSRGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPEWLEEQYGIRDGQ----YYLTETQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ YG RR+EI + + E+
Sbjct: 476 EYKTLLEEIAELMHILASTERLMEVIREELETVRDVYGDE----RRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P +R +RGKPI+N+ L++ E+IT ILP+ +F ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPHATRTARGKPIVNILPLEDGERITAILPVD----EFSPEKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL ++D LIG +T+G +IMLFS +GK VRF E
Sbjct: 648 ATGDGTVKKTPLNQFANVRSNGLIAVNLRDDDSLIGVDITNGDSEIMLFSKAGKVVRFKE 707
Query: 718 -------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
VR MGR+A GV GM+L + +V++L+V +N+
Sbjct: 708 AEEIPVLDEQGKPVLDENGQPEIKFKGVRPMGRTASGVRGMKLAENDQVVSLIVPSNEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LT T+NGYGKRT + EY RGT+G++SIK ++RNG VV A V E+M+IT G
Sbjct: 767 DILTVTQNGYGKRTELSEYPTKGRGTQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
L+RTRVSE+ ++GR+TQGV LI + G+QR+
Sbjct: 827 TLVRTRVSEVSQVGRNTQGVTLIRTAEDESVVGLQRI 863
>gi|424942538|ref|ZP_18358301.1| DNA gyrase subunit A [Pseudomonas aeruginosa NCMG1179]
gi|346058984|dbj|GAA18867.1| DNA gyrase subunit A [Pseudomonas aeruginosa NCMG1179]
gi|453043071|gb|EME90805.1| DNA gyrase subunit A [Pseudomonas aeruginosa PA21_ST175]
Length = 923
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/889 (50%), Positives = 633/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD+++Y+ +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDIAVYNTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + N D
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDE 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 656 AEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 776 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERV 883
>gi|254785508|ref|YP_003072937.1| DNA gyrase subunit alpha [Teredinibacter turnerae T7901]
gi|237684254|gb|ACR11518.1| DNA gyrase, A subunit [Teredinibacter turnerae T7901]
Length = 856
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/851 (51%), Positives = 618/851 (72%), Gaps = 10/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MGDIAKEILPVSIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGSIDGD AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDGAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+S++LL DLDKET+DF+ NYDG E+ P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMQKLSHDLLADLDKETVDFVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G + ++ NP +I+DLI+ IP PDFPT GII G + + Y TG+GR+
Sbjct: 181 NIPPHNLREVITGCIRLIENPAATIDDLIEDIPGPDFPTGGIINGRAGILMAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK + + NR I+I E+PYQVNK L+EKI++LVK+KK+E IS +RDESDK G
Sbjct: 241 YVRAKAEVVTDEKTNRDTILIHEIPYQVNKARLIEKIAELVKDKKIEGISEIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE+KR ++ ++VLN LY QTQLQ+ FG+N++ALV+ QPK+LNLK++L +FI HR+E
Sbjct: 301 LRVVIEIKRGDMGDVVLNNLYAQTQLQSVFGINIVALVDDQPKVLNLKQMLEHFISHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE H+LEGL +A+ NID I +I+++ TP EA+ ++ W +
Sbjct: 361 VVTRRTVYLLRKARERGHVLEGLAVAIANIDEVIALIKASQTPAEAREALLARGWGTNTI 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S+ + + + +++ Y LS Q Q IL++ L RLT ME K++ +YE
Sbjct: 421 SQFLERAGADACRPDDLGAEFGMRDG-QYFLSPAQVQAILELRLHRLTGMEHDKLLAEYE 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++++ + +ILSN+ R++E+I +EL + +YG RR++I + + + EDLI
Sbjct: 480 EKLQQISEYLEILSNAVRLMEVIREELEAVMAEYGDE----RRTDIQNSQQDLTVEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+T+S+ GY K+QP+ Y+AQ+RGG GK A KDED++ L IANTHDYILCF+N
Sbjct: 536 EEDRVVTISHGGYAKTQPLDAYQAQRRGGMGKAATSVKDEDFVEHLLIANTHDYILCFTN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++WLKV+QIP R SRG+P++N+ L+ E+IT ILP+ R+F ++ ++ M+TS
Sbjct: 596 AGKVFWLKVYQIPVAGRQSRGRPMVNLLPLEEGERITSILPV----REFDEDRFIVMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT LS F+ PR G+ A++L D L+G A+TDG DIML S SGKA RF E V
Sbjct: 652 QGTVKKTPLSQFARPRSVGLRAIDLVEGDHLVGTAITDGQQDIMLLSSSGKAARFAEEQV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR++RGV G+R+ + +VIA+++ + + VLT +ENGYGKRT + ++ RG++G
Sbjct: 712 RSMGRTSRGVRGIRMADEHRVIAMVIPADGGK-VLTVSENGYGKRTDVDDFPTKGRGSQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+++ ++RNG +V A + E+M+I+ G L+RTR E+ + R+TQGV LI V
Sbjct: 771 VIAMQVSERNGGLVGAVQIFDGDELMMISDQGTLVRTRGDEVSLLSRNTQGVRLIKVRES 830
Query: 841 SKLCGVQRLCK 851
+ GV R+ +
Sbjct: 831 EHIVGVARIAE 841
>gi|428785768|ref|ZP_19003257.1| DNA gyrase, A subunit [Erwinia amylovora ACW56400]
gi|426275632|gb|EKV53361.1| DNA gyrase, A subunit [Erwinia amylovora ACW56400]
Length = 853
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/857 (53%), Positives = 629/857 (73%), Gaps = 19/857 (2%)
Query: 26 MSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSI 85
MSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN+ + K ARVVG+ +GKYHPHGD ++
Sbjct: 1 MSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAV 60
Query: 86 YDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDF 145
YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAMRYTE R++KI++ELL DL+KET+DF
Sbjct: 61 YDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAMRYTEVRMSKIAHELLADLEKETVDF 120
Query: 146 ISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSI 205
+ NYDG E+ P V+PTRIPNLLINGSSGIAVGMATNIPPHN+TEVI+G L + + ++
Sbjct: 121 VPNYDGTEQIPEVMPTRIPNLLINGSSGIAVGMATNIPPHNITEVINGCLAYIADENITV 180
Query: 206 NDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELP 265
L++ IP PDFPTA II G + + Y TG+G++ IRA+ +E + R II+ E+P
Sbjct: 181 EGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKIYIRARGEVEVDAKTGRETIIVHEIP 240
Query: 266 YQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQ 325
YQVNK L+EKI++LVKEK+LE IS LRDESDK GMRIVIE+KR+ + E+VLN LY TQ
Sbjct: 241 YQVNKARLIEKIAELVKEKRLEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSLTQ 300
Query: 326 LQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTI 385
LQ +FG+NM+AL GQPK++ LK+IL F+ HR+EVI RRTIFELRKAR+ AHILE L +
Sbjct: 301 LQTSFGINMVALHQGQPKIMPLKDILEAFVRHRREVITRRTIFELRKARDRAHILEALAV 360
Query: 386 ALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII---GFNKKNYNTISKINNISK 442
AL NID I++IR+ TP EAK +I W L +VS ++ G N + + I
Sbjct: 361 ALANIDPIIELIRAAPTPAEAKAGLIARPWELGNVSAMLERAGDNAARPEWLEEQYGI-- 418
Query: 443 LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEI 502
+N Y L++ QAQ IL + LQ+LT +E +K++++Y++++ ++ +L IL++S+R++E+
Sbjct: 419 --HNGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKDLLAQIAELLRILASSERLMEV 476
Query: 503 ITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQPISEY 562
I +EL +I++++G RR+EI N + + EDLI +D+V+TLS+ GY+K QP+S+Y
Sbjct: 477 IREELELIRDQFGDK----RRTEITANTADINIEDLINQEDVVVTLSHQGYVKYQPLSDY 532
Query: 563 RAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGK 622
AQ+RGG+GK A K+ED+I++L +ANTHD ILCFS+ GRLYW+KV+Q+P+ SR +RG+
Sbjct: 533 EAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYWMKVYQLPEASRGARGR 592
Query: 623 PIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIA 682
PI+N+ L+ E+IT ILP+ R++ + +FM+T+ G VKKT L++FS PR +GIIA
Sbjct: 593 PIVNLLPLEANERITAILPV----REYAEGWNIFMATASGTVKKTALTDFSRPRSAGIIA 648
Query: 683 VNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVI 742
VNL ++D LIG +LT+GS + MLFS +GK VRF E++VR MGR+A GV G++L + +V+
Sbjct: 649 VNLRDDDELIGVSLTNGSDEAMLFSAAGKVVRFAESAVRTMGRTASGVRGIKLAEGDRVV 708
Query: 743 ALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
+L+V + +++T T+NGYGKRT EY +R T+G+ISIK +RNG V+ A V
Sbjct: 709 SLIVPRDDG-AIMTVTQNGYGKRTANVEYPTKSRATQGVISIKVTERNGPVIGAVQVVDG 767
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPVI 862
+IM+IT G L+RTRVSE+ +GR+TQGVILI + G+QR+ + ++ +
Sbjct: 768 DQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAEDENVVGLQRVAEPVAEEE---LD 824
Query: 863 TIDGPTASGKGTVAQLV 879
IDG A G +A V
Sbjct: 825 AIDGSAAEGDDDIAPEV 841
>gi|407802062|ref|ZP_11148904.1| DNA gyrase subunit A [Alcanivorax sp. W11-5]
gi|407023737|gb|EKE35482.1| DNA gyrase subunit A [Alcanivorax sp. W11-5]
Length = 906
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/886 (51%), Positives = 626/886 (70%), Gaps = 43/886 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+EV + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+ N WN
Sbjct: 1 MTDLAREVTQVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+++LL DLDKET+DF+ NYDG EK P+V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHDLLADLDKETVDFVDNYDGTEKIPAVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + +++DL++ I PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNEDLTVDDLMQYIQGPDFPTAGIINGRAGIVQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE+ + N+ AIII ELPY +NK L+EKI++LVKEKK+E I+ LRDESDK G
Sbjct: 241 YVRARADIEDMEKGNKQAIIITELPYMLNKARLIEKIAELVKEKKIEGITELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL+R E ++VLN LY QTQL++ FG+NM+AL++GQPKLLNLK++L FI HR+E
Sbjct: 301 MRVVIELRRGENADVVLNNLYAQTQLESVFGINMVALLDGQPKLLNLKDMLEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE H+LEGL +AL NID I++I+ + + EA+ +I+ W +V
Sbjct: 361 VVTRRTVYELRKAREKGHVLEGLAVALANIDPVIELIKQSPSGAEAREALIKRGWAPGEV 420
Query: 421 SKII----GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
++ G + + + + Q Y LS QAQ IL++ LQ+LT MEQ+K++
Sbjct: 421 VTMLERAGGPDACRPDGLEDDYGMRDGQ----YWLSPEQAQAILELRLQKLTGMEQEKLV 476
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
Y+ +++K+I+L IL++ +R++ +I +ELN I+ +Y + RRSEI + + S E
Sbjct: 477 QDYQELLEKIIELGLILADPERLLAVIREELNAIREEYA----DPRRSEIQTSRSDFSME 532
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLIA + +V+TLSN GY K+QPI YRAQKRGGRGK A KDED++ L +A THD +L
Sbjct: 533 DLIAEETVVVTLSNGGYAKAQPIDTYRAQKRGGRGKAATAVKDEDYVEHLLVAGTHDTLL 592
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMF-SLKNKEKITVILPL------------- 642
CF+N G++YWL+V+++P G R SRGKP++N+ +L+ +E+IT IL L
Sbjct: 593 CFTNIGKVYWLRVFELPHGGRGSRGKPVVNLIPALQQEERITAILRLDAEFVRQQSAEDD 652
Query: 643 ----------------SNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLS 686
D ++FM+TS GIVK+T LS F+ PR +G+IAV L
Sbjct: 653 AEVEDADLDVIDDAEEGEEIVDTTSGPFIFMATSTGIVKRTQLSKFARPRSNGLIAVRLQ 712
Query: 687 NEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLV 746
L+ A+T G DIML + +GK RF + SVR MGR+ARGV GM++ + +IAL+V
Sbjct: 713 PGQSLVNVAVTQGDEDIMLVASNGKVARFRQASVRVMGRTARGVRGMKVADGEAMIALIV 772
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
Q +LTA+ENGYGKRT + E+ RGT+G+I + N RNG +V AT V ++M
Sbjct: 773 PQPGGQ-LLTASENGYGKRTGVDEFPTKGRGTQGVIGMVVNDRNGALVGATQVFGGEDLM 831
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
LI+ G L+RTRV E+ ++ R+TQGV LI + + +L GV+R+ ++
Sbjct: 832 LISNQGTLVRTRVDEVSQLSRNTQGVTLIRLGDGERLVGVERIPEL 877
>gi|302187665|ref|ZP_07264338.1| DNA gyrase subunit A [Pseudomonas syringae pv. syringae 642]
Length = 926
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/885 (50%), Positives = 637/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELELIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSESEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|418293362|ref|ZP_12905271.1| DNA gyrase subunit A [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064754|gb|EHY77497.1| DNA gyrase subunit A [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 936
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/918 (48%), Positives = 644/918 (70%), Gaps = 59/918 (6%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVI+GRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + +I++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++GQP+ LNLKE+L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGQPRTLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKDALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VEAMVERAGADACRPEGLDEQFGLRDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL++ R++E+I +EL +K +G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILTQIGELIRILTSPVRLMEVIREELEGVKRDFG----DARRTEILESRLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS---------------- 643
+ G++YWLK ++IP+ SR SRG+P++N+ L E+IT +L +
Sbjct: 596 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGEEDLD 655
Query: 644 ---------------------NNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIA 682
++++D P +Y+FM+T+ G VKKT L FS PR SG+IA
Sbjct: 656 EADGLVIEHDDADDVESDDADSDEKDEPTGSYIFMATANGTVKKTPLVQFSRPRTSGLIA 715
Query: 683 VNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVI 742
+ L D LI AA+TDG+ ++M+FSD GK +RF E+ VR MGR+ARGV GMRL + Q++I
Sbjct: 716 LKLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLPEGQRII 775
Query: 743 ALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
++L+ + Q +LTA+ GYGKRT ++E+ + RG +G+I++ TN+RNG ++ A V
Sbjct: 776 SMLIPESDAQ-ILTASLRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGPLIGAVQVLEG 834
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKIT--------- 853
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+ + +
Sbjct: 835 EEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERVQEPSEEDVLDDIE 894
Query: 854 ------MIKKYIPVITID 865
++K +PVI+ D
Sbjct: 895 ALLDDDALEKEMPVISTD 912
>gi|338999910|ref|ZP_08638546.1| DNA gyrase subunit A [Halomonas sp. TD01]
gi|338763331|gb|EGP18327.1| DNA gyrase subunit A [Halomonas sp. TD01]
Length = 919
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/909 (49%), Positives = 641/909 (70%), Gaps = 45/909 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ + +E+E+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MGDIAREILPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQHFSMRHVLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ELL DL+K+T+D++ NYDG E+ P+VLPT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMARLAHELLADLEKDTVDWVDNYDGTERIPAVLPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ E+IDG L ++ + +++DL++ IP PDFPT GII G + + D Y TG+GR+
Sbjct: 181 NIPPHNMREIIDGCLALIDDYTLTVDDLMQYIPGPDFPTGGIINGRAGILDAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA IE ++ R III ELPYQVNK L+EKI++LVKEKK+E I+ LRDESDK G
Sbjct: 241 YVRACHTIEHDDKSGRDHIIITELPYQVNKARLIEKIAELVKEKKIEGIAELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE+KR E ++V+N L+ QTQLQN FG+NM+AL NGQP+ LN+KE+L FI HR+E
Sbjct: 301 LRVVIEIKRGESGDVVVNNLFAQTQLQNVFGINMVALENGQPRTLNIKEMLEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++EL+KARE H+LEGL +A++NID I++I+++ EA+ K++ TW V
Sbjct: 361 VVTRRTLYELKKARERGHLLEGLAVAISNIDEVIELIKASPNAAEAREKLLAKTWKPGQV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
+ ++ ++ L Y+LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 TAMLERAGATSCKPEDLDEGFGLNTAATEYRLSPAQAQAILELRLHRLTGLETEKLLDEY 480
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
++++K+ + T IL++ R++E+I +EL+ ++ +YG RR+EI + ++ S EDLI
Sbjct: 481 LSILEKIAEFTTILASPDRLMEVIREELHAVREQYGDD----RRTEIQASHLDLSIEDLI 536
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+T+S GY K+QP+S+Y+AQ+RGGRGK A KDED I L +A+THD +L FS
Sbjct: 537 AEEDMVVTVSRSGYAKTQPLSDYQAQRRGGRGKSATAMKDEDVIEHLLVASTHDTVLLFS 596
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G++YWLKV+++P SR SRGKP++NM L+ E + ILP+ RD+ +Y+F +T
Sbjct: 597 NRGKVYWLKVYEMPNASRGSRGKPLVNMLPLEEGEAVNAILPV----RDYDPEHYIFFAT 652
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VK+T L FS PR G+IA++L D L+GAA+T GS ML S +GKA+RF E +
Sbjct: 653 AKGTVKRTSLEQFSRPRSVGLIAIDLEEGDRLVGAAITSGSDHAMLLSSNGKAIRFEEGN 712
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQK---------------------QS----- 753
VRAMGR+ARGV GMRL +VI+L++ +Q+ Q+
Sbjct: 713 VRAMGRTARGVRGMRLAGDAEVISLIIPKSQQIDAEDDADVDADAQVVAAENAQAEGQIY 772
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
+LTA+ENGYGKRT ++E+ RG +G+I+++T++RNG +VAA V E+MLIT G
Sbjct: 773 ILTASENGYGKRTRLEEFPLRGRGGQGVIAMQTSERNGALVAAMQVYDSDEMMLITDRGT 832
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKY------IPVITIDG- 866
L+RTRV E+ R+TQGV+LI + + KL R+ + I + V+ DG
Sbjct: 833 LVRTRVEEVSTTSRNTQGVMLIRLGKEEKLVKTVRVDEPAEIDTFESDISETDVLGTDGV 892
Query: 867 ---PTASGK 872
P A G+
Sbjct: 893 DTDPVAPGE 901
>gi|146282687|ref|YP_001172840.1| DNA gyrase subunit A [Pseudomonas stutzeri A1501]
gi|145570892|gb|ABP79998.1| DNA gyrase subunit A [Pseudomonas stutzeri A1501]
Length = 954
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/886 (50%), Positives = 631/886 (71%), Gaps = 43/886 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVI+GRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 20 MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLYAMSELGNDWN 79
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 80 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 139
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDKET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 140 RYTEVRMAKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 199
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + +I++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 200 NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI 259
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 260 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 319
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++ALV+GQP+ LNLKE+L F+ HR+
Sbjct: 320 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALVDGQPRTLNLKELLEAFVRHRR 379
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 380 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKDALISTAWESSA 439
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 440 VEAMVERAGADACRPENLDPQYGLRDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 498
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+N R++E+I +EL +K +G + RR+EI+ + ++ + DLI
Sbjct: 499 QEILTQIGELIRILTNPVRLMEVIREELEGVKRDFG----DARRTEILESRLDLTLADLI 554
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 555 TEEERVVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 614
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS---------------- 643
+ G++YWLK ++IP+ SR SRG+P++N+ L E+IT +L +
Sbjct: 615 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGDEELD 674
Query: 644 --------------------NNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAV 683
++++D P Y+FM+T+ G VKKT L FS PR SG+IA+
Sbjct: 675 DAEGLVIEHDDVDDVEGDDDSDEKDEPTGAYIFMATAKGTVKKTPLVQFSRPRTSGLIAL 734
Query: 684 NLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIA 743
L D LI AA+TDG+ ++M+FSD GK +RF E+ VR MGR+ARGV GMRL + Q++I+
Sbjct: 735 KLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLPEGQRIIS 794
Query: 744 LLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYH 803
+L+ Q +LTA+ GYGKRT ++E+ + RG +G+I++ TN+RNG +V A V
Sbjct: 795 MLIPEPDAQ-ILTASVRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGPLVGAVQVLEGE 853
Query: 804 EIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 854 EIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERV 899
>gi|440745156|ref|ZP_20924452.1| DNA gyrase subunit A [Pseudomonas syringae BRIP39023]
gi|440372832|gb|ELQ09610.1| DNA gyrase subunit A [Pseudomonas syringae BRIP39023]
Length = 928
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/885 (50%), Positives = 637/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELELIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|261253081|ref|ZP_05945654.1| DNA gyrase subunit A [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954868|ref|ZP_12597898.1| DNA gyrase subunit A [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260936472|gb|EEX92461.1| DNA gyrase subunit A [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342814576|gb|EGU49516.1| DNA gyrase subunit A [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 874
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/852 (53%), Positives = 630/852 (73%), Gaps = 17/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAFIDNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILE L +AL NID I++IR+ +TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELKKARDRAHILEALALALANIDEIIELIRNAATPAEAKAGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + I Q Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLESAGTDAARPDWLEEQYGIRDGQ----YYLTETQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I +EL +++ +G ++RR+EI + + E+
Sbjct: 476 EYKALLDEIKELMHILASTERLMEVIREELETVRDAFG----DVRRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP+ +F ++ ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILPVD----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL ++D LIG +T+G DIMLFS +GK VRF E
Sbjct: 648 ATGDGTVKKTPLTQFANVRANGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFAE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+ VRAMGR+A GV GM+L + +V++L+V N+ +LT T+NGYGKRT + EY R
Sbjct: 708 DKVRAMGRTAAGVRGMKLAEDDQVVSLIVPANEG-DILTVTQNGYGKRTELAEYPTKGRA 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK + RNG VV A V E+M+IT G L+RTRVSE+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSDRNGPVVGAVQVEEGDEMMMITDAGTLVRTRVSEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRL 849
+ G+QR+
Sbjct: 827 AEDENVVGLQRI 838
>gi|388257213|ref|ZP_10134393.1| DNA gyrase subunit A [Cellvibrio sp. BR]
gi|387939417|gb|EIK45968.1| DNA gyrase subunit A [Cellvibrio sp. BR]
Length = 884
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/850 (52%), Positives = 625/850 (73%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKE+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MVEFAKEISPVSIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDRAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+++LL DLDKET+DF+ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHDLLADLDKETVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+ G L +++NP+ +I++L++ IP PDFPT II G + + Y TG+G +
Sbjct: 181 NIPPHNLKEVVQGCLELINNPDITIDELMEFIPGPDFPTGAIINGRAGIVQAYRTGRGSI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+RAK IE + R I+I E+PYQ+NK L+E+I++LVKEKK+E IS LRDESDK G
Sbjct: 241 IVRAKAEIERDEKTGRETILIHEIPYQLNKARLIERIAELVKEKKIEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+K++E +++LN LY QTQLQ TFG+N++AL +GQPK+LNLK++L F+ HR+E
Sbjct: 301 MRIVIEVKKSEAADVLLNNLYSQTQLQTTFGVNIVALDDGQPKILNLKQLLEAFVKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE HILEGL +A++NID I +I+++++P EAK+ ++ WN ++
Sbjct: 361 VVTRRTVYLLRKARERGHILEGLAVAISNIDEVIALIKNSASPAEAKDSLMGRGWNAAEM 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ + ++ + +++ Y LS QAQ IL++ L RLT ME K++ +Y+
Sbjct: 421 APYLERAGEDACRPEDLGAEFGMRDGHYY-LSAAQAQAILELRLHRLTGMEHDKLLAEYD 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+ ++ + +IL N+ R++E+I +EL + N YG RR+EI+ + ++ +TEDLI
Sbjct: 480 EKLIQIAEFLEILGNALRLMEVIREELTQVINDYGDK----RRTEIVASTLDLTTEDLIN 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+T+S+ GY KSQP+ +Y+AQ+RGG GK A KDED++ L IA+THD +L F+N
Sbjct: 536 VEDRVVTISHGGYAKSQPLDDYQAQRRGGMGKSATAVKDEDYVQHLLIASTHDTVLLFTN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMF-SLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
G++YWLKV+ IP R SRG+P+IN+ SL+ E IT ILP+ + + + ++FM+T
Sbjct: 596 AGKVYWLKVYMIPVAGRQSRGRPVINLLPSLEEGEHITSILPV----KSYDDDKFIFMTT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L+ FS R G+ A+ L D L+G A+T+GS D++LFS SGKA RF E+
Sbjct: 652 ANGTVKKTALTQFSRQRSVGLRAIELDEGDTLVGTAITNGSCDVILFSSSGKAARFRESQ 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR++RGV G+RL + Q+V+ +++ Q VLT +ENGYGKRT + E+ RG++
Sbjct: 712 VRAMGRTSRGVRGIRLAEGQRVVGMVIPMENGQ-VLTVSENGYGKRTEVGEFPAKGRGSQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I ++T +RNG++V A V EIMLI+ G ++RTRV E+ + R+TQGV LI ++
Sbjct: 771 GVIGMQTTERNGQLVGAVQVFDGEEIMLISDQGTMVRTRVDEVSVLSRNTQGVRLIKLKE 830
Query: 840 KSKLCGVQRL 849
++ G++R+
Sbjct: 831 GERMQGLERI 840
>gi|113461306|ref|YP_719375.1| DNA gyrase subunit A [Haemophilus somnus 129PT]
gi|170717841|ref|YP_001784900.1| DNA gyrase subunit A [Haemophilus somnus 2336]
gi|112823349|gb|ABI25438.1| DNA gyrase subunit A [Haemophilus somnus 129PT]
gi|168825970|gb|ACA31341.1| DNA gyrase, A subunit [Haemophilus somnus 2336]
Length = 881
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/881 (52%), Positives = 632/881 (71%), Gaps = 45/881 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M F V + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MTDFTPNVTPVSIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQSSNTYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ +VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KAYVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+DF NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPTLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N E SI++L++ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLNEVLDGCLAYVDNEEISIDELMQYIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E N + R I++ E+PYQVNK L+EKI++LV+EKK+E ISN+RD S+K G
Sbjct: 241 YVRAKAEI-ETNDKGRETIVVTEIPYQVNKAKLVEKIAELVREKKIEGISNVRDVSNKEG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
R+ +E+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPKLLNLK+I+ F+ HR+E
Sbjct: 300 NRVEVEVKRDAVGEVVLNNLYALTQMQVTFGINMVALDHGQPKLLNLKQIIEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
VI RRT+FELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VITRRTVFELRKARERAHILEGLAIALANIDPVIELIRASKTADEARVGLLSQAWELGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + ++ +N+ + Y LSD QA+ IL + LQRLT +E +KI+
Sbjct: 420 ATMLSATGVDSSRPDNLA--DNLGIIDGK--YYLSDEQARAILDLRLQRLTGLEHEKIVT 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ L IL+++ R+ E++ +EL +K ++G + RR+EI + + + ED
Sbjct: 476 EYQEILIEIGKLLHILNSADRLKEVLCEELEKVKEEFG----DARRTEITSASGDINLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+++TLS+ GY+K QP+++Y AQ+RGG+GK A KDED+I +L +ANTHD ILC
Sbjct: 532 LITQEDVIVTLSHAGYVKYQPLTDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYWLKV+Q+PQ +R +RG+PI+N+ L+ E+IT ILP++ + ++ ++ M
Sbjct: 592 FSSRGRLYWLKVYQLPQANRGARGRPIVNILPLQENERITAILPVAA----YEEDKFIVM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK L+ FS PR SGIIA+NL +ED LIG +TDG+ +IMLFS G+ VRF E
Sbjct: 648 ATAGGLVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGTNEIMLFSSQGRVVRFEE 707
Query: 718 NSVRAMGRSARGVIGMRL---------------------EKKQ-------KVIALLVSNN 749
N+VRAMGR A GV G++L + K+ KV++L++ N
Sbjct: 708 NAVRAMGRLATGVRGIKLALTNDISDDESAVEIEDISDEDTKEPLDLNVDKVVSLVIPKN 767
Query: 750 QKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLIT 809
++LTAT+NGYGKRT + EY +R TKG+ISIK + RNGKVVAAT V +IMLIT
Sbjct: 768 DG-AILTATQNGYGKRTALSEYPTKSRNTKGVISIKVSDRNGKVVAATQVEENDQIMLIT 826
Query: 810 TGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
G L+RTRVSEI +GR+TQGV LI ++ ++R+C
Sbjct: 827 DAGTLVRTRVSEISIVGRNTQGVRLIRTAETEQVVSLERVC 867
>gi|410630757|ref|ZP_11341444.1| DNA gyrase subunit A [Glaciecola arctica BSs20135]
gi|410149723|dbj|GAC18311.1| DNA gyrase subunit A [Glaciecola arctica BSs20135]
Length = 899
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/874 (53%), Positives = 636/874 (72%), Gaps = 35/874 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + A E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRR+LFAM+E+ N +N
Sbjct: 1 MTEHAHEILPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRILFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+A+VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYEAIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYD E P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDESEFIPNVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G + ++ NP+ +I +LI+ IP PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCIAMVDNPDITIEELIEHIPGPDFPTAAFISGRKGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + T II+ E+PYQVNK L+EKI+ LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRARAEIETEDNGKET-IIVHEIPYQVNKARLIEKIADLVKEKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KRNE E++LN LY QTQLQ FG+NM+AL QPK+ NL +IL FILHR+E
Sbjct: 300 MRIVVEVKRNESAEVLLNHLYSQTQLQTVFGINMVALDKTQPKIFNLMDILKAFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE AHILEGL IAL NID I +I+++ +P +AK + W+L DV
Sbjct: 360 VVTRRTVFELKKARERAHILEGLAIALVNIDPIIAMIKASKSPADAKVSLTAQGWSLGDV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++++ ++ N ++ + + + +Y L++ QAQ IL + L +LT +E KI+++
Sbjct: 420 AEML---ERAGNDAARPDWLEPEYGIRDGLYYLTEQQAQAILDLRLNKLTGLEHDKILSE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +++ + +L IL++ +R++EII +EL ++++YG + RR+ I + + EDL
Sbjct: 477 YKELLEIIAELLHILNSPQRLMEIIREELEKVRDEYG----DPRRTVITAASHDIDIEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS GY+K Q +++Y +Q+RGGRGK A KDED+I +L +ANTHD+ILCF
Sbjct: 533 IEREEVVVTLSREGYVKYQKLNDYESQRRGGRGKSATKMKDEDFIEKLLVANTHDHILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + YV M+
Sbjct: 593 STRGRLYWLKVYQLPLASRNARGRPIVNILPLEENERITAILPI----QEFEEGKYVLMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L+++S PR +GIIAVNL++ D LIG +T G DIMLFSD+GK VRFNE
Sbjct: 649 TANGTVKKTALTSYSRPRANGIIAVNLNDGDELIGVDITHGDDDIMLFSDAGKVVRFNEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+RL+ QKVI+L+V ++LTAT
Sbjct: 709 QREAETGNVKLDPETGEELLALRPMGRTATGVRGIRLKDGQKVISLIVPKGDG-AILTAT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENG+GKRT + +Y +R T+G++SIK ++RNGKVV A VN EIMLI+ G L+RT
Sbjct: 768 ENGFGKRTPVADYPAKSRATQGVVSIKVSERNGKVVGAVQVNESDEIMLISDQGTLVRTH 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
V E+ +GR+TQGV LI + G+QR+ +I
Sbjct: 828 VEEVSTVGRNTQGVRLIRTIEGEHVVGLQRIDEI 861
>gi|424073211|ref|ZP_17810629.1| DNA gyrase subunit A [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407996411|gb|EKG36884.1| DNA gyrase subunit A [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 925
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/885 (50%), Positives = 637/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELELIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|152985032|ref|YP_001347342.1| DNA gyrase subunit A [Pseudomonas aeruginosa PA7]
gi|150960190|gb|ABR82215.1| DNA gyrase, A subunit [Pseudomonas aeruginosa PA7]
Length = 921
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/889 (50%), Positives = 632/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + N D
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDE 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 656 AEGAVLEGEVVEAAEIEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 776 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ R+TQGV LI + + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSLSSRNTQGVTLIKLASDEVLVGLERV 883
>gi|410612207|ref|ZP_11323287.1| DNA gyrase subunit A [Glaciecola psychrophila 170]
gi|410168208|dbj|GAC37176.1| DNA gyrase subunit A [Glaciecola psychrophila 170]
Length = 903
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/870 (53%), Positives = 636/870 (73%), Gaps = 35/870 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + A E++ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRR+LFAM+E+ N +N
Sbjct: 1 MTEHAHEILPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRILFAMNELKNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+A+VRMAQ+FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYEAIVRMAQTFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF+ NYD E P+VLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDESEFIPNVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G + ++ NP+ +I +LI+ IP PDFPTA I G + + Y TG+G++
Sbjct: 181 NIPPHNLTEVVNGCIAMVDNPDITIEELIEHIPGPDFPTAAFISGRKGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + T II+ E+PYQVNK L+EKI+ LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRARAEIETEDNGKET-IIVHEIPYQVNKARLIEKIADLVKDKKIEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KRNE E++LN LY QTQ+Q FG+NM+AL QPK+ NL +IL FILHR+E
Sbjct: 300 MRIVVEVKRNESAEVLLNHLYSQTQMQTVFGINMVALDKTQPKIFNLMDILKAFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE AHILEGL IAL NID I +I+++ +P EAK + W+L DV
Sbjct: 360 VVTRRTVFELKKARERAHILEGLAIALVNIDPIIAMIKASKSPAEAKVSLAAQGWSLGDV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++++ +++ N ++ + + + +Y L++ QAQ IL + L +LT +E KI+++
Sbjct: 420 AEML---ERSGNDAARPDWLEPEYGIRDGLYYLTEQQAQAILDLRLNKLTGLEHDKILSE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ + +L IL++ +R++EII +EL I+++YG RR+ I + + EDL
Sbjct: 477 YKELLDFIAELLHILNSPERLMEIIREELEAIRDEYGDE----RRTVITAASHDIDIEDL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +++V+TLS+ GY+K Q +++Y +Q+RGGRGK A K+ED+I +L +ANTHD+ILCF
Sbjct: 533 IEREEVVVTLSHEGYVKYQKLNDYESQRRGGRGKSATKMKNEDFIEKLLVANTHDHILCF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + +V M+
Sbjct: 593 STRGRLYWLKVYQLPLASRNARGRPIVNILPLEENERITAILPI----QEFEEGKFVLMA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L+++S PR +GIIAVNL++ D LIG +T G DIMLFSD+GK VRFNE
Sbjct: 649 TANGTVKKTALTSYSRPRSNGIIAVNLNDGDELIGVDITHGDDDIMLFSDAGKVVRFNEK 708
Query: 719 --------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTAT 758
++R MGR+A GV G+RL+ QKVI+L+V ++LTAT
Sbjct: 709 QREADTGNVKLDPETGEELLALRPMGRTATGVRGIRLKDGQKVISLIVPKGDG-AILTAT 767
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
ENG+GKRT + +Y +R T+G++SIK ++RNGKVV A VN EIMLI+ G L+RTR
Sbjct: 768 ENGFGKRTPVSDYPAKSRATQGVVSIKVSERNGKVVGAVQVNDSDEIMLISDQGTLVRTR 827
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQR 848
V E+ +GR+TQGV LI ++ G+QR
Sbjct: 828 VEEVSTVGRNTQGVRLIRTIEGERVVGLQR 857
>gi|416051456|ref|ZP_11577504.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347992889|gb|EGY34266.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 890
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/880 (51%), Positives = 634/880 (72%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE NL+N
Sbjct: 1 MSDLIQDITPVSIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNLYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E P VLPT++P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEMIPEVLPTKVPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI++ VK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIAEFVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQP LLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPNLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL +AL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAVALANVDPIIELIRKAPNPESAKRELLARPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ +++ +Y L+++QAQ IL + LQ+LT++ +I+++Y+
Sbjct: 420 ADMLAASGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTSLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL + +R++E+I +EL I+ ++ + RR+EI + + + EDLIA
Sbjct: 479 KLLDAIGELLYILRSPERLMEVIREELEQIREQF----NDPRRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR SRG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGSRGRPIVNILPLNENERITAILPVAA----YEEDKFVVMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +T+GS +IMLFS G+ VRF+E++V
Sbjct: 651 GGIVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITNGSNEIMLFSSQGRVVRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLNDDESAVEIEDVSDDNAEETLDLNIDKVVSLVIPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G
Sbjct: 771 -ILTATQNGYGKRTKLDEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI ++ ++R+C++
Sbjct: 830 TLVRTRVSEVGIVGRNTQGVRLIRTSEAEQVVSLERICEV 869
>gi|422605691|ref|ZP_16677704.1| DNA gyrase subunit A [Pseudomonas syringae pv. mori str. 301020]
gi|330889346|gb|EGH22007.1| DNA gyrase subunit A [Pseudomonas syringae pv. mori str. 301020]
Length = 928
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/885 (51%), Positives = 636/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELEVIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGLGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|422674619|ref|ZP_16733971.1| DNA gyrase subunit A [Pseudomonas syringae pv. aceris str. M302273]
gi|330972345|gb|EGH72411.1| DNA gyrase subunit A [Pseudomonas syringae pv. aceris str. M302273]
Length = 925
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/885 (50%), Positives = 637/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELELIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|410092251|ref|ZP_11288783.1| DNA gyrase subunit A [Pseudomonas viridiflava UASWS0038]
gi|409760416|gb|EKN45564.1| DNA gyrase subunit A [Pseudomonas viridiflava UASWS0038]
Length = 928
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/886 (50%), Positives = 636/886 (71%), Gaps = 43/886 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALINTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELELIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 ------------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAV 683
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELVDDAENSNETEEERKARVKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIAL 715
Query: 684 NLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIA 743
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I+
Sbjct: 716 ELDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLIS 775
Query: 744 LLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYH 803
+L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V
Sbjct: 776 MLIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGE 834
Query: 804 EIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 EIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 880
>gi|421619229|ref|ZP_16060191.1| DNA gyrase subunit A [Pseudomonas stutzeri KOS6]
gi|409778780|gb|EKN58464.1| DNA gyrase subunit A [Pseudomonas stutzeri KOS6]
Length = 936
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/887 (50%), Positives = 633/887 (71%), Gaps = 44/887 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVI+GRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + +I++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++GQP+ LNLKE+L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGQPRTLNLKELLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I +I+++ TP EAK+ +I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKDALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL + L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEGLDPQFGLRDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+N R++E+I +EL +K +G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILTQIGELIRILTNPVRLMEVIREELEGVKRDFG----DARRTEILESRLDLTLADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y+AQ+RGGRGK A K+ED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS---------------- 643
+ G++YWLK ++IP+ SR SRG+P++N+ L E+IT +L +
Sbjct: 596 SKGKVYWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGDDELD 655
Query: 644 ---------------------NNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIA 682
++++D P +Y+FM+T+ G VKKT L FS PR SG+IA
Sbjct: 656 DADGLVIEHDDADDVESDDADSDEKDEPTGSYIFMATANGTVKKTPLVQFSRPRTSGLIA 715
Query: 683 VNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVI 742
+ L D LI AA+TDG+ ++M+FSD GK +RF E+ VR MGR+ARGV GMRL + Q++I
Sbjct: 716 LKLEEGDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLVEGQRII 775
Query: 743 ALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
++L+ Q +LTA+ GYGKRT ++E+ + RG +G+I++ TN+RNG +V A V
Sbjct: 776 SMLIPEPGAQ-ILTASVRGYGKRTSMEEFPRRGRGGQGVIAMVTNERNGALVGAVQVLEG 834
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERV 881
>gi|424068790|ref|ZP_17806239.1| DNA gyrase subunit A [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|407996524|gb|EKG36993.1| DNA gyrase subunit A [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 925
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/885 (50%), Positives = 637/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELELIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|66046876|ref|YP_236717.1| DNA gyrase subunit A [Pseudomonas syringae pv. syringae B728a]
gi|422616819|ref|ZP_16685524.1| DNA gyrase subunit A [Pseudomonas syringae pv. japonica str.
M301072]
gi|440722398|ref|ZP_20902779.1| DNA gyrase subunit A [Pseudomonas syringae BRIP34876]
gi|440727490|ref|ZP_20907719.1| DNA gyrase subunit A [Pseudomonas syringae BRIP34881]
gi|443642911|ref|ZP_21126761.1| DNA gyrase, subunit A [Pseudomonas syringae pv. syringae B64]
gi|63257583|gb|AAY38679.1| DNA gyrase subunit A [Pseudomonas syringae pv. syringae B728a]
gi|330897204|gb|EGH28623.1| DNA gyrase subunit A [Pseudomonas syringae pv. japonica str.
M301072]
gi|440361250|gb|ELP98482.1| DNA gyrase subunit A [Pseudomonas syringae BRIP34876]
gi|440363628|gb|ELQ00789.1| DNA gyrase subunit A [Pseudomonas syringae BRIP34881]
gi|443282928|gb|ELS41933.1| DNA gyrase, subunit A [Pseudomonas syringae pv. syringae B64]
Length = 925
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/885 (50%), Positives = 637/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILNQIGELIRILNSATRLMEVIREELELIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R SG+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|254481894|ref|ZP_05095137.1| DNA gyrase, A subunit [marine gamma proteobacterium HTCC2148]
gi|214038023|gb|EEB78687.1| DNA gyrase, A subunit [marine gamma proteobacterium HTCC2148]
Length = 886
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/849 (52%), Positives = 621/849 (73%), Gaps = 10/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE++ + +E+EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WN
Sbjct: 1 MGDLAKEILPVNIEDEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R +VDGQGNFGS+DGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYLMVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+++L DLDKET+DF+ NYDG E+ P+VLPTR+P LL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMKKISHQMLADLDKETVDFVDNYDGTERIPAVLPTRVPTLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L +L +P+ ++++L++ IP PDFPT II G + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVVSGCLALLGDPDLTVDELMEHIPGPDFPTGAIINGRAGIIQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ + + + II+ E+PYQ+NK L+E+I++LVKEKK+E I+ LRDESDK G
Sbjct: 241 YVRARAEVIHDEKRGKDIIIVHEIPYQLNKAKLIERIAELVKEKKIEGITELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL+R E+ ++VLN LY QTQLQ+ FG+NM+ALV+GQPK+LNLKEIL F+ HR+E
Sbjct: 301 LRVVIELRRGEVGDVVLNNLYAQTQLQSVFGINMVALVDGQPKILNLKEILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE H+LEGL IAL NID I++I+++ + EAK K+I +W DV
Sbjct: 361 VVTRRTVYLLRKARERGHLLEGLAIALANIDPVIELIKASPSSAEAKEKLIARSWRPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + +++ L++ +Y LS QAQ IL++ L RLT +E +K++N+YE
Sbjct: 421 TGMLERAGDDACRPDELDPQFGLRDG-LYYLSPAQAQAILELRLHRLTGLEHEKLLNEYE 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++++ + +ILS++ R+ +I +EL I +YG RR+EI + + + EDLI
Sbjct: 480 EKLREIAEYLEILSDADRLKAVIREELEEIVTEYGDE----RRTEITASQHDLTVEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+T+S+ GY K+QP+++Y+AQ+RGG GK A KDED++ L IA+TH ILCFSN
Sbjct: 536 EEDRVVTISHGGYAKTQPLTDYQAQRRGGMGKSATAVKDEDFVEHLLIASTHATILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+QIP RNSRG+P+IN+ L+ E++T ILP+ D+ + +Y+FM+T+
Sbjct: 596 LGKVYWLKVYQIPLAGRNSRGRPMINLLPLEEGERVTSILPVE----DYTEGHYIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L NF+ R G+ A+ L D L+G A+T G D+ML S GKAVRF E V
Sbjct: 652 SGTVKKTALINFARQRSVGLRALELEEGDVLVGTAVTTGDCDVMLLSSEGKAVRFKEGDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+ARGV G++L ++I+L++ + VLT +ENGYGKRT + E+ RGTKG
Sbjct: 712 RAMGRTARGVRGIKLGDGHEMISLIIP-REGGRVLTVSENGYGKRTEMSEFPTKGRGTKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+++T++RNG +V A V ++MLI+ G L+RTR EI +GR+TQGV +I +
Sbjct: 771 VIAMQTSERNGTLVGAVQVFDGDQLMLISNQGTLVRTRADEISVLGRNTQGVRVIRTKTD 830
Query: 841 SKLCGVQRL 849
L V+R+
Sbjct: 831 ESLVSVERI 839
>gi|392983107|ref|YP_006481694.1| DNA gyrase subunit A [Pseudomonas aeruginosa DK2]
gi|392318612|gb|AFM63992.1| DNA gyrase subunit A [Pseudomonas aeruginosa DK2]
Length = 921
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/889 (50%), Positives = 632/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYNTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + N D
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDE 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 656 AEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 776 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERV 883
>gi|244538888|dbj|BAH82931.1| DNA gyrase subunit A [Candidatus Ishikawaella capsulata Mpkobe]
Length = 855
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/853 (53%), Positives = 628/853 (73%), Gaps = 16/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MN+ K IS+ +EEE+ SYL YAMSVIV RALPDVRDGLKPVHRRVLFAM+E++NL+N
Sbjct: 9 MNELKKNTISVNVEEELTNSYLSYAMSVIVSRALPDVRDGLKPVHRRVLFAMYELSNLYN 68
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YDA+VRMAQ FSLR L+DGQGNFGSIDGDSAAAM
Sbjct: 69 KPYKKSARIVGDVIGKYHPHGDTAVYDAIVRMAQPFSLRYILIDGQGNFGSIDGDSAAAM 128
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K+T++FISNYDG EK P VLP++IPNLLINGSSGIAVGMAT
Sbjct: 129 RYTEIRMSKIAHELLTDLEKDTVNFISNYDGSEKIPEVLPSQIPNLLINGSSGIAVGMAT 188
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ L + + ++ L++ +P PDFPTA II G + V + Y TG+G++
Sbjct: 189 NIPPHNLTEVINACLAYIEDHNITVKKLMEYLPGPDFPTAAIINGQNGVEEAYRTGRGKI 248
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA I N+ R III E+PYQVNK L+E+I++LVK+K+++ IS LRDESDK G
Sbjct: 249 YIRAFVEIAIDNKTKREIIIIHEIPYQVNKARLIERIAELVKDKRVDGISTLRDESDKDG 308
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+RIV+E+KR+ + ++VLN LY TQLQ +FG+NM+AL +GQPK + LKEIL FI HR+E
Sbjct: 309 LRIVLEVKRDAVAQVVLNNLYSLTQLQISFGINMVALHHGQPKTMTLKEILEAFICHRRE 368
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
++ RRT+FEL KARE H++EGL IAL N+D I IR++S+ E K I+ WNL +
Sbjct: 369 IVTRRTVFELHKARERIHVVEGLIIALENLDQIIYFIRNSSSLSEIKIAILTKKWNLGKL 428
Query: 421 SKIIGFNK---KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+I +K KN+ + ++I +++ Y L++ Q Q IL M LQ+LT +E KK+I
Sbjct: 429 IQITHHSKSFNKNFKYFCEKSHI----HDNKYTLTEHQVQAILDMRLQKLTGLEHKKLIE 484
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+YE ++K++ +LT +L + +++II +L II+N++G + RR+EI +N I+ E+
Sbjct: 485 EYETLVKQINNLTHVLQHPDHLMKIICKDLKIIRNQFG----DARRTEININGIDIKNEE 540
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLSN GY+K QP+++Y AQ+RGG+GK A K+ED+I+ L +ANTHD ILC
Sbjct: 541 LIHHEDVVVTLSNQGYVKYQPLTDYEAQRRGGKGKSAAQIKEEDFIDSLLVANTHDTILC 600
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYW+KV+Q+P+ SR SRG+PI+N+ L KE+IT ILP+ + + + M
Sbjct: 601 FSSKGRLYWMKVYQLPEASRGSRGRPIVNLLPLAEKERITTILPVYK----YEEGLNILM 656
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ GIVKKT ++ FS PR GIIA+ L +D LIG ALT G+ +IMLFS +GK VRF+E
Sbjct: 657 ATAKGIVKKTAINEFSRPRNIGIIAIKLHGDDELIGVALTKGNDEIMLFSSAGKVVRFSE 716
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
+VR MGR+A GV G++L K V++L+V +K +LT T+NGYGKRT EY +R
Sbjct: 717 TTVRNMGRAASGVCGIKLAKNDLVVSLIVP-RKKGEILTVTQNGYGKRTANSEYPTKSRA 775
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ISIK KRNG V+ A V +I++IT G L+RTRVSE+ +GR+TQGVILI
Sbjct: 776 TQGVISIKVTKRNGLVIGAIQVVDSDQIIIITNAGTLVRTRVSEVSIVGRNTQGVILIRT 835
Query: 838 ENKSKLCGVQRLC 850
++ G+QR+
Sbjct: 836 AENERVVGLQRVA 848
>gi|444334025|ref|ZP_21149667.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
gi|443550962|gb|ELT59032.1| DNA gyrase A [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
Length = 887
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/880 (51%), Positives = 631/880 (71%), Gaps = 39/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +++ + LEEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE NL+N
Sbjct: 1 MSDLIQDITPVSLEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNLYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET++F+ NYDG E P VLPT++P LL+NGS GIAVGMAT
Sbjct: 121 RYTEARMTKIAHELLADLDKETVNFVPNYDGSEMIPEVLPTKVPALLVNGSYGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + +I++L+ IP PDFPTA +I G + + Y TG+G++
Sbjct: 181 NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ I E + + R +II++E+PYQVNK L+EKI++ VK+KK+E IS LRDESDK G
Sbjct: 241 YVRARAEI-ETDEKGRESIIVNEIPYQVNKAKLIEKIAEFVKDKKIEGISGLRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY TQ+Q TFG+N++AL +GQPKLLNLK+++ F+LHR+E
Sbjct: 300 MRIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL IAL N+D I++IR P+ AK +++ W L V
Sbjct: 360 VVTRRTIFELRKARERTHILEGLAIALANVDPIIELIRKAPNPENAKRELLARPWQLGHV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + ++ +++ +Y L+++QAQ IL + LQ+LTN+ +I+++Y+
Sbjct: 420 ADMLAASGVDAARPEDLDEQYGIRDG-LYYLTEVQAQAILDLRLQKLTNLGHDEILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + L IL + +R++E+I +EL I+ ++ + R +EI + + + EDLIA
Sbjct: 479 KLLDAIGKLLYILRSPERLMEVIREELEQIREQF----NDPRITEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QPI++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHEGYVKYQPITDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+PQ SR +RG+PI+N+ L E+IT ILP++ + ++ +V M+T+
Sbjct: 595 RGRLYWLKVYQLPQASRGARGRPIVNILPLNENERITAILPVAA----YEEDKFVVMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK L+ FS PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF+E++V
Sbjct: 651 GGIVKKIALTEFSRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQ 752
RAMGR A GV G++L KV++L++ N +
Sbjct: 711 RAMGRLATGVRGIKLALTNDLSDDESAVEIEDVSDDNAEETLDLNIDKVVSLVIPKNNGE 770
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAA V +IMLIT G
Sbjct: 771 -ILTATQNGYGKRTKLDEYPTKSRNTKGVISIKVSERNGKVVAAAQVEENDQIMLITDAG 829
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRVSE+ +GR+TQGV LI + ++R+C++
Sbjct: 830 TLVRTRVSEVSIVGRNTQGVRLIRTSEAEHVVSLERICEV 869
>gi|422647000|ref|ZP_16710131.1| DNA gyrase subunit A [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330960545|gb|EGH60805.1| DNA gyrase subunit A [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 928
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/885 (50%), Positives = 636/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEGLIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILTQIGELIRILNSATRLMEVIREELELIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R G+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|89094106|ref|ZP_01167049.1| DNA gyrase subunit A [Neptuniibacter caesariensis]
gi|89081581|gb|EAR60810.1| DNA gyrase subunit A [Oceanospirillum sp. MED92]
Length = 866
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/849 (51%), Positives = 629/849 (74%), Gaps = 10/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MGDLAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R TLVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYTLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KIS+ELL DL+KET+DF+ NYDG EK P+VLP R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKISHELLADLEKETVDFVDNYDGTEKIPAVLPNRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EV+ G + ++ N + S++DL++ IP PDFPT GII G + + Y TG+GR+
Sbjct: 181 NIPPHNLSEVVRGCIALIENSDLSVDDLMEFIPGPDFPTGGIINGRAGILQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK H+EE + + ++II E+PYQ+NK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 YVRAKHHVEEDQKSGKASLIITEIPYQLNKARLIEKIAELVKDKKIEGITELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E+P++V+N L+ QTQ+++ FG+NM+ALV+GQPK+L+LK L FI HR+E
Sbjct: 301 MRIVIELRRGEMPDVVINNLFAQTQMESVFGINMVALVDGQPKILDLKTALECFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE HILEGL +AL NID I++I+++ TP EAK ++I W DV
Sbjct: 361 VVTRRTVYLLRKARERGHILEGLAVALANIDPVIELIKTSPTPAEAKERLIAEAWTPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++ ++ + L+ Y LS QAQ IL++ L RLT +E +K+I +Y+
Sbjct: 421 IQMLERAGEDACRPEDLEEQYGLREGK-YNLSPAQAQAILELRLHRLTGLEHEKLIAEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L IL + +R++E+I +EL I +YG RR+EI + + + DLI
Sbjct: 480 ELLERIAELLKILGSHERLMEVIREELEAILEEYGDE----RRTEITASRKDLTVADLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+T+S+ GY K+QP+++Y++Q+RGG+GK A KDED+I L IANTHD ILCF++
Sbjct: 536 EEDMVVTISHGGYAKTQPLTDYQSQRRGGKGKSAAAIKDEDFIEHLLIANTHDTILCFTD 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWL+V++IP SR +RG+PI+N+ L E+I+ ILP+ + ++ ++FM+T+
Sbjct: 596 RGKVYWLRVFEIPVASRTARGRPIVNILPLDEGERISTILPVGG----YEEDKFIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+NFS PR SG+IA++L ++D LIGAA+T+G D+ML + +GK++RF E V
Sbjct: 652 SGTVKKTALTNFSRPRASGLIALDLLDDDHLIGAAITNGEDDVMLMTSAGKSMRFREEDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G++++ KVI+L++ + +LTA+ENGYGK+T + ++ RG +G
Sbjct: 712 RPMGRTARGVRGVKMDDGVKVISLIIP-QEGGKILTASENGYGKKTAVDDFPVKGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+ + + RNG + A V ++MLI+ G L+RT EI ++GR+TQGV LI V +
Sbjct: 771 VIAQQCSDRNGSLAGAVQVFDGDDVMLISDQGTLVRTGGDEISELGRNTQGVTLIRVADD 830
Query: 841 SKLCGVQRL 849
+L V R+
Sbjct: 831 ERLVSVARI 839
>gi|261377477|ref|ZP_05982050.1| DNA gyrase, A subunit [Neisseria cinerea ATCC 14685]
gi|269146206|gb|EEZ72624.1| DNA gyrase, A subunit [Neisseria cinerea ATCC 14685]
Length = 918
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/896 (52%), Positives = 631/896 (70%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ F++R LVDGQGNFGSIDG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFAMRYVLVDGQGNFGSIDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ I+ L +L PE I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTINACLRLLDAPETEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTH E + R AI+IDE+PYQVNK L+EKI +LV+EK LE IS LRDESDKSG
Sbjct: 250 IRAKTHTEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T GS DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRSQGIKAIALKEGDYLVGAAQTGGSDDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
+ VR GR + G+ GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDDLEDEAADNENALPSGKHGVRPSGRGSGGLRGMRLPVDS 779
Query: 740 KVIALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ S +QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFSPEAEQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV+ ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVSETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDF-LIGAALTDGSYDIMLFSDSGK 711
V +T+ G K+T ++++S K G IA+N + L+ A L + D+ML + G
Sbjct: 798 VLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVSETDDLMLITSGGV 857
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL-LVSNNQKQSVLT 756
+R +R GR+A GV + L++ + +++L V+ ++ +S L+
Sbjct: 858 LIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESESDLS 903
>gi|237799018|ref|ZP_04587479.1| DNA gyrase subunit A [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021872|gb|EGI01929.1| DNA gyrase subunit A [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 928
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/885 (50%), Positives = 636/885 (71%), Gaps = 42/885 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+++YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILTQIGELIRILNSATRLMEVIREELELIRSEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L + E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R G+IA+
Sbjct: 656 AELDDAENSNETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERV 879
>gi|152996872|ref|YP_001341707.1| DNA gyrase subunit A [Marinomonas sp. MWYL1]
gi|150837796|gb|ABR71772.1| DNA gyrase, A subunit [Marinomonas sp. MWYL1]
Length = 896
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/863 (51%), Positives = 626/863 (72%), Gaps = 25/863 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + +E E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MGELAKEIIPVSIENELKGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ LL+DL+KET+DF+ NYDG E P VLP R+P LL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRMAKISHHLLMDLEKETVDFVPNYDGTEFMPEVLPARVPGLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E+IDG L V+ N + +I++LI IP PDFPT I G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEIIDGCLAVIDNADITIDELIDHIPGPDFPTGAFINGRAGIIEAYKTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ H E+ + NR +I+ E+PYQ+NK ++EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 YMRARHHFEDMEKGNRQSIVFTEIPYQLNKAKVIEKIAELVKEKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E P++V+N ++ QTQLQ+ FG+NM+ALV+G+P+LLN+K+IL F+ HR+E
Sbjct: 301 MRIVIELRRGENPDVVVNNIFTQTQLQSVFGINMVALVDGRPQLLNIKQILECFVKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE HILEGL ++L NID I++IR++ T EAK KI+ +W DV
Sbjct: 361 VVTRRTIFELRKARERGHILEGLAVSLANIDRVIELIRTSPTSAEAKEKIVSESWEPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ ++ + +++ + Y LS QAQ IL + L RLT +E K++ +
Sbjct: 421 VAML---ERAGADACRPDDLEAGYGFVDGAYHLSPDQAQAILDLRLHRLTGLEHDKLLGE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +I+ + +L +ILSN R++E+I +EL +K +G + RR+EI+ + + + DL
Sbjct: 478 YKTLIELIGELLNILSNPDRLMEVIREELQEVKETFG----DARRTEILTSRQDLTIADL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I MV+T+SN GY KSQP+ EY+AQ+RGGRGK + KDED I L + ++HD I+ F
Sbjct: 534 IDEAPMVVTISNTGYAKSQPLVEYQAQRRGGRGKSSASMKDEDHIEHLLVTSSHDTIMLF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL-------SNNKRD--- 648
SN+G++YWL+V++IP SR+++G+PI+N+ L+ E I+ +LPL ++++ D
Sbjct: 594 SNFGKVYWLRVFEIPVASRSAKGRPIVNLLPLREGESISALLPLPVVEAVEADSEADDDV 653
Query: 649 -----FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDI 703
++Y+FM+T+ G VKKT + +F+ PR +G+IA++L D L+G ++T+G DI
Sbjct: 654 SDDAIVEASSYIFMATANGTVKKTAMQHFARPRSTGLIALSLDETDELVGVSVTNGENDI 713
Query: 704 MLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYG 763
ML S SGK +RF E+ VRAMGR+A GV G+RL + KV++L+V + +VL A ENGYG
Sbjct: 714 MLVSSSGKTIRFKESDVRAMGRTAAGVRGIRLGEDAKVVSLIVPQD-GSAVLMACENGYG 772
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
KRTL++++ + RG +G+I I+ ++RNG VV A V+ EI+LIT G L+RTRV+E+
Sbjct: 773 KRTLVEDFPVYGRGGQGVIGIQVSERNGPVVGAAQVDETDEIILITDQGTLVRTRVTEVS 832
Query: 824 KMGRSTQGVILITVENKSKLCGV 846
GR+TQGV LI + N L G+
Sbjct: 833 CQGRNTQGVTLIRLTNDEHLVGI 855
>gi|429743247|ref|ZP_19276818.1| DNA gyrase, A subunit [Neisseria sp. oral taxon 020 str. F0370]
gi|429165965|gb|EKY07982.1| DNA gyrase, A subunit [Neisseria sp. oral taxon 020 str. F0370]
Length = 927
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/894 (52%), Positives = 630/894 (70%), Gaps = 52/894 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L PE I++LI I+ APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPETEIDELINILQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILAEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLLSRAWRSGLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + L + Y LS+IQA IL+M L+ LT ++Q++I+ Y
Sbjct: 430 EDMLSRTDLDLRMARPEGLPANLGLQEQGYYLSEIQADAILRMSLRNLTGLDQEEIVGDY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DIL+ +RI +II +EL K +G RRSEI + + EDLI
Sbjct: 490 KNIMAKIIDFLDILAKPERITQIIREELEETKTNFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
+ G+VKK LS F N R GI A+ L D+L+GAA T GS DIMLFS+ GKA+RFNE
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAIALKEGDYLVGAAQTGGSDDIMLFSNLGKAIRFNEYW 721
Query: 718 ------------------------------------NSVRAMGRSARGVIGMRLEKKQKV 741
+ VR GR + G+ GMRL K+
Sbjct: 722 EKSGNDEAEDADIETEISDDLEDETADNENALPSGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAAQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ +L ++R+ +
Sbjct: 842 LVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGEQLVSLERVAE 895
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDF-LIGAALTDGSYDIMLFSDSGK 711
V +T+ G K+T ++++S K G IA+N + L+ A L + D+ML + G
Sbjct: 798 VLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGGV 857
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
+R +R GR+A GV + L++ +++++L + + TA E+ T E
Sbjct: 858 LIRTKVEQIRETGRAAAGVKLINLDEGEQLVSLERVAEEPED--TAAEDESDADTGALEN 915
Query: 772 TKHNRGTK 779
N+G +
Sbjct: 916 EAENKGAE 923
>gi|399520033|ref|ZP_10760819.1| DNA gyrase subunit A [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399112033|emb|CCH37378.1| DNA gyrase subunit A [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 922
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/895 (49%), Positives = 635/895 (70%), Gaps = 48/895 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDKET+D++ NYDG E+ P+V+PT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L ++ N + +++DL++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLSEVIDGCLALIDNADLTVDDLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +E+ ++ R +++ ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARVEVEDIDKVGGRQQLVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+P++VLN LY QTQ+Q+ FG+N++ALV+GQPK++NLK++L FI HR+
Sbjct: 301 GMRVVIELRRGEVPDVVLNNLYAQTQMQSVFGINVVALVDGQPKIMNLKDMLEVFIRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+++ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKASPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VEAMVERAGADSCRPEGLDAQFGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N +R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILSLIGELIRILTNPERLMEVIREELEKVKAEFG----DARRTEIVASRLDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y AQ+RGG+GK A KDED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYEAQRRGGKGKSATGVKDEDYVEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL--------SNNKRDF-- 649
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + + D
Sbjct: 596 SKGKVYWLRTFEIPEASRAARGRPLVNLLPLDEGERITAMLQIDLEALQQSAGADEDLDD 655
Query: 650 -------------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKS 678
P Y+FM+T+ G VKKT L FS PR +
Sbjct: 656 EGVVIEGEATEVVEAEEVEEVEGETPELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSA 715
Query: 679 GIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKK 738
G+IA+ L D LI AA+TDG+ ++MLFSD+GK +RF E+ VR MGR+ARGV GMRL K
Sbjct: 716 GLIALKLEEGDTLIAAAITDGAKEVMLFSDAGKVLRFAESKVRTMGRTARGVRGMRLGKD 775
Query: 739 QKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATL 798
Q++I++L+ Q +LTA+E G+GKRT + ++ + RG +G+I++ T++RNGK+V A
Sbjct: 776 QQLISMLIPEPGAQ-ILTASERGFGKRTALGKFPRRGRGGQGVIAMVTSERNGKLVGAIQ 834
Query: 799 VNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKIT 853
V EIMLI+ G L+RTRV E+ GR+TQGV LI + L G++R+ + T
Sbjct: 835 VQDGEEIMLISDQGTLVRTRVDEVSSSGRNTQGVTLIKLAKDETLVGLERVQEPT 889
>gi|408375136|ref|ZP_11172812.1| DNA gyrase subunit A [Alcanivorax hongdengensis A-11-3]
gi|407765017|gb|EKF73478.1| DNA gyrase subunit A [Alcanivorax hongdengensis A-11-3]
Length = 923
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/894 (51%), Positives = 631/894 (70%), Gaps = 51/894 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+EV + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTDLAREVTPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG EK P V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDFVDNYDGTEKIPDVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L ++ + + +DL++ I PDFPTAGII G + + Y TG+GRV
Sbjct: 181 NIPPHNLGEVVDGCLALIDDDSLTPDDLMEYIKGPDFPTAGIINGRAGIVQAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE+ ++ + AII+ E+PYQVNK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 YMRARAEIEQTDKSGKEAIIVTEIPYQVNKARLIEKIAELVKDKKIEGITELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL++ E E+VLN LY+QTQ+++ FG+N +ALV+GQPK LNL+E+L FI HR+E
Sbjct: 301 MRIVIELRKGENAEVVLNNLYQQTQMESVFGINTVALVDGQPKTLNLRELLDAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE AH+LEGL +AL+NID I++I+S+ + EAK K++ W DV
Sbjct: 361 VVTRRTIYELRKAREKAHLLEGLAVALSNIDPVIELIKSSPSGAEAKEKLLAKGWAPGDV 420
Query: 421 SKII----GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
+++ G N + + + + ++ +Y LS QAQ IL + LQ+LT +E++K+I
Sbjct: 421 LQMLERAGGENAARPDGLGEQYGL----HDGLYHLSPEQAQAILDLRLQKLTGLEREKLI 476
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
+ Y+ +++++ +L IL++ +R++++I DEL I+ +YG RRSEI+ + ++ S E
Sbjct: 477 SDYQELLEQIRELMLILADPQRLMQVIRDELTAIREEYGDE----RRSEIVASRLDLSME 532
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLIA + +V+TLSN GY K QPI YRAQKRGGRGK A KDED++ L +A THD +L
Sbjct: 533 DLIAEETVVVTLSNGGYAKMQPIDTYRAQKRGGRGKSAGQLKDEDYVEHLLVAGTHDTLL 592
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMF-SLKNKEKITVILPLSNNK--------- 646
F++ G+++WL+ +++PQG R SRGKPI+N+ +L N E+IT IL L +
Sbjct: 593 LFTDAGKVFWLRTFELPQGGRASRGKPIVNLLPALGNDERITAILRLDADMVRQQKADAA 652
Query: 647 ----------------------------RDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKS 678
D ++FM+TS GIVK+T L+NF+ PR S
Sbjct: 653 EAEDEDDTVVEAEEVLDDSAEGDDAEVVTDSVPGPFIFMATSSGIVKRTQLANFARPRSS 712
Query: 679 GIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKK 738
G+IAV L + L+ A+T G D+ML + +GKAVRF+++ VR M R ARGV G++L
Sbjct: 713 GLIAVKLQEGEHLVNVAITQGHEDVMLVARNGKAVRFHQSKVRVMSRLARGVRGIKLADG 772
Query: 739 QKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATL 798
VI+L+V + Q +LTA+E+GYGKRT + EY RG +G+I++ N RNG++V AT
Sbjct: 773 VDVISLIVPEEEGQ-ILTASEHGYGKRTPLTEYPTKGRGGQGVIAMVVNDRNGELVGATQ 831
Query: 799 VNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
V +IMLI+ G L+RT V +I GR+TQGV LI + KLCG+ + ++
Sbjct: 832 VFGDEDIMLISNQGTLVRTGVDQISTSGRNTQGVRLIRLGEDEKLCGLATIPEL 885
>gi|359781485|ref|ZP_09284709.1| DNA gyrase subunit A [Pseudomonas psychrotolerans L19]
gi|359370549|gb|EHK71116.1| DNA gyrase subunit A [Pseudomonas psychrotolerans L19]
Length = 943
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/894 (50%), Positives = 625/894 (69%), Gaps = 51/894 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ELL DLDKET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N E +++DL++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIENGELTVDDLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRE-NRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA+ +E+ ++ NR I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YVRARAEVEDIDKSANRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E PE+VLN LY QTQLQ FG+N++AL++GQP+ LNLKE+L FI HR+
Sbjct: 301 GMRVVIELRRGETPEVVLNNLYAQTQLQTVFGINVVALLDGQPRTLNLKELLEAFIRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + + L Y LS QAQ IL + L RLT +E +K+I +Y
Sbjct: 421 VREMVERAGADSCRPDDLPEQYGLHEGK-YHLSPEQAQAILDLRLHRLTGLEHEKLIAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+N +R++E+I +EL +K ++G RR+EII + ++ + DLI
Sbjct: 480 QEILLQIGELIRILTNPERLMEVIREELEKVKAEFGDK----RRTEIIASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP+ Y+AQ+RGGRG+ A K+ED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLHAYQAQRRGGRGRSASAVKEEDYIEHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS---------------- 643
+ G++YW + ++IP+ SR +RG+P++N+ L E+IT +LP+
Sbjct: 596 SLGKVYWKRTYEIPEASRAARGRPLVNLLPLAEGERITAMLPVDLEAIRQQAPAGDEDLG 655
Query: 644 ----------------------------NNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNP 675
+ +D P Y+FM+T G VKKT L FS P
Sbjct: 656 EQDDNLDIEDAVLVEDDVESEGEEGELLDADQDEPTGAYIFMATRNGTVKKTPLVQFSRP 715
Query: 676 RKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRL 735
R +G+IA+ L D LI AA+TDG+ ++MLFSD GK +RF E VR MGR+ARGV GMRL
Sbjct: 716 RSNGLIALKLEEGDSLIAAAITDGAREVMLFSDGGKVIRFKERHVRTMGRTARGVRGMRL 775
Query: 736 EKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
+ Q++I++L+ + +LTA+ NG+GKRT + EY + RG +G+I++ N+RNG ++
Sbjct: 776 AENQRLISMLIPEPGAE-ILTASLNGFGKRTAMAEYPQRGRGGQGVIAMVINERNGPLIG 834
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
A V EIMLI+ G L+RT V I + GR+TQGV LI + KL G++R+
Sbjct: 835 AIQVLDGEEIMLISDQGTLVRTPVEGISRTGRNTQGVTLIKLGKGEKLVGLERV 888
>gi|421152918|ref|ZP_15612486.1| DNA gyrase subunit A [Pseudomonas aeruginosa ATCC 14886]
gi|404524596|gb|EKA34923.1| DNA gyrase subunit A [Pseudomonas aeruginosa ATCC 14886]
Length = 921
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/889 (50%), Positives = 631/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L + HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVCVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + N D
Sbjct: 596 SKGKVYWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDE 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 656 AEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 776 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERV 883
>gi|192382538|gb|ACF04290.1| GyrA [Neisseria meningitidis]
gi|192382540|gb|ACF04291.1| GyrA [Neisseria meningitidis]
gi|192382552|gb|ACF04297.1| GyrA [Neisseria meningitidis]
gi|192382556|gb|ACF04299.1| GyrA [Neisseria meningitidis]
Length = 916
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/896 (52%), Positives = 629/896 (70%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD+++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDIAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ I+ L +L PE I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTINACLRLLDAPETEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTH E + R AI+IDE+PYQVNK L+EKI +LV+EK LE IS LRDESDKSG
Sbjct: 250 IRAKTHTEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESPNAAEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|419797134|ref|ZP_14322634.1| DNA gyrase, A subunit [Neisseria sicca VK64]
gi|385698710|gb|EIG29056.1| DNA gyrase, A subunit [Neisseria sicca VK64]
Length = 924
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/894 (52%), Positives = 629/894 (70%), Gaps = 52/894 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L PE I++LI I+ APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPETEIDELINILQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILAEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLLSRAWRSGLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + L + Y LS+IQA IL+M L+ LT ++Q++I+ Y
Sbjct: 430 EDMLSRTDLDLRMARPEGLPANLGLQEQGYYLSEIQADAILRMSLRNLTGLDQEEIVGDY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DIL+ +RI +II +EL K +G RRSEI + + EDLI
Sbjct: 490 KNIMAKIIDFLDILAKPERITQIIREELEETKTNFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
+ G+VKK LS F N R GI A+ L D+L+GAA T GS DIMLFS+ GKA+RFNE
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAIALKEGDYLVGAAQTSGSDDIMLFSNLGKAIRFNEYW 721
Query: 718 ------------------------------------NSVRAMGRSARGVIGMRLEKKQKV 741
+ VR GR + G+ GMRL K+
Sbjct: 722 EKSGNDEAEDADIETEISDDLEDETADNENALPSGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAAQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 842 LVGETDDLMLITSGGVLIRTKVQQIRETGRAAAGVRLINLDEGETLVSLERVAE 895
>gi|422651722|ref|ZP_16714514.1| DNA gyrase subunit A [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964797|gb|EGH65057.1| DNA gyrase subunit A [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 928
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/892 (50%), Positives = 638/892 (71%), Gaps = 42/892 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDLDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILAQIGELIRILNSATRLMEVIREELELIRAEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R G+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E G+GKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGFGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIK 856
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+ + + ++
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERVQEPSEVE 886
>gi|298368898|ref|ZP_06980216.1| DNA gyrase, A subunit [Neisseria sp. oral taxon 014 str. F0314]
gi|298282901|gb|EFI24388.1| DNA gyrase, A subunit [Neisseria sp. oral taxon 014 str. F0314]
Length = 920
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/894 (52%), Positives = 629/894 (70%), Gaps = 52/894 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L PE I++LI I+ APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPETEIDELINILQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILAEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLLSRAWRSGLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + L + Y LS+IQA IL+M L+ LT ++Q++I+ Y
Sbjct: 430 EDMLSRTDLDLRMARPEGLPANLGLQEQGYYLSEIQADAILRMSLRNLTGLDQEEIVGDY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DIL+ +RI +II +EL K +G RRSEI + + EDLI
Sbjct: 490 KNIMAKIIDFLDILAKPERITQIIREELEETKTNFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
+ G+VKK LS F N R GI A+ L D+L+GAA T GS DIMLFS+ GKA+RFNE
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAIALKEGDYLVGAAQTSGSDDIMLFSNLGKAIRFNEYW 721
Query: 718 ------------------------------------NSVRAMGRSARGVIGMRLEKKQKV 741
+ VR GR + G+ GMRL K+
Sbjct: 722 EKSGNDEAEDADIETEISDDLEDETADNENALPSGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAAQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ K
Sbjct: 842 LVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGETLVSLERVAK 895
>gi|28868951|ref|NP_791570.1| DNA gyrase subunit A [Pseudomonas syringae pv. tomato str. DC3000]
gi|213968721|ref|ZP_03396863.1| DNA gyrase, subunit A [Pseudomonas syringae pv. tomato T1]
gi|301381336|ref|ZP_07229754.1| DNA gyrase subunit A [Pseudomonas syringae pv. tomato Max13]
gi|302060238|ref|ZP_07251779.1| DNA gyrase subunit A [Pseudomonas syringae pv. tomato K40]
gi|302130027|ref|ZP_07256017.1| DNA gyrase subunit A [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422658212|ref|ZP_16720648.1| DNA gyrase subunit A [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28852191|gb|AAO55265.1| DNA gyrase, subunit A [Pseudomonas syringae pv. tomato str. DC3000]
gi|213926654|gb|EEB60207.1| DNA gyrase, subunit A [Pseudomonas syringae pv. tomato T1]
gi|331016841|gb|EGH96897.1| DNA gyrase subunit A [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 928
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/892 (50%), Positives = 638/892 (71%), Gaps = 42/892 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILAQIGELIRILNSATRLMEVIREELELIRAEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R G+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E G+GKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGFGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIK 856
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+ + + ++
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERVQEPSEVE 886
>gi|352101952|ref|ZP_08959037.1| DNA gyrase subunit A [Halomonas sp. HAL1]
gi|350600245|gb|EHA16314.1| DNA gyrase subunit A [Halomonas sp. HAL1]
Length = 918
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/877 (50%), Positives = 628/877 (71%), Gaps = 36/877 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ + +E+E+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAMHE+ N WN
Sbjct: 1 MGDIAREILPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMHELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQHFSMRHVLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++ELL DL+K+T+D++ NYDG E+ P+VLPT+ PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSRLAHELLADLEKDTVDWVDNYDGTERIPAVLPTKTPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EVIDG L ++ + +++DL++ IP PDFPT II G + + Y TG+GR+
Sbjct: 181 NIPPHNMREVIDGCLALIDDYTLTVDDLMEYIPGPDFPTGAIINGRAGILSAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA IE ++ R III ELPYQVNK L+EKI++LVKEKK+E I+ LRDESDK G
Sbjct: 241 YVRACHTIEHHDKTGRDHIIISELPYQVNKARLIEKIAELVKEKKIEGIAELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE+KR E E+V+N L+ QTQLQN FG+NM+AL NGQP+ LNLKE+L FI HR+E
Sbjct: 301 LRVVIEVKRGESGEVVVNNLFAQTQLQNVFGINMVALENGQPRTLNLKEMLEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++EL+KARE H+LEGL +A++NID I++I+++ EA+ K++ TW V
Sbjct: 361 VVTRRTLYELKKARERGHLLEGLAVAISNIDEVIELIKASPNAAEAREKLLAKTWQPGQV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
+ ++ ++ L Y+LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 TAMLERAGATSCKPEELEEGFGLNTAATSYRLSPAQAQAILELRLHRLTGLETEKLLDEY 480
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+++K+ +LT+IL++ R++E+I +EL+ +++++G + RR+EI + ++ S EDLI
Sbjct: 481 LTILEKIAELTEILASPDRLMEVIREELHAVRDQFG----DDRRTEIQASHLDLSIEDLI 536
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+T+S GY K+QP+S+Y+AQ+RGGRGK A KDED I L +A+THD +L FS
Sbjct: 537 AEEDMVVTVSRSGYAKTQPLSDYQAQRRGGRGKSATAMKDEDVIEHLLVASTHDTVLLFS 596
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G++YWLKV+++P SR SRGKP++NM L+ E + ILP+ RD+ +Y+F +T
Sbjct: 597 NRGKVYWLKVYEMPNASRGSRGKPLVNMLPLEEGEAVNAILPV----RDYDPEHYIFFAT 652
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VK+T L FS PR G+IA++L D L+GAA+T G+ ML S +GKA+RF E
Sbjct: 653 AKGTVKRTSLEQFSRPRSVGLIAIDLEEGDRLVGAAITTGNDHAMLLSSNGKAIRFEEGK 712
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQ----------------KQSV--------- 754
RAMGR+ARGV GMRL +VI+L++ +Q ++SV
Sbjct: 713 ARAMGRTARGVRGMRLAGDAEVISLIIPKSQQIDAEADAEEETQDGVQESVVAETADGQI 772
Query: 755 --LTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+TA+ENGYGKRT ++E+ RG +G+I+++T++RNG +VAA V E+MLIT G
Sbjct: 773 YIMTASENGYGKRTRLEEFPLRGRGGQGVIAMQTSERNGSLVAAMQVYDSDEMMLITDRG 832
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
L+RTRV E+ R+TQGV+LI + + KL R+
Sbjct: 833 TLVRTRVEEVSTTSRNTQGVMLIRLGKEEKLVKTVRV 869
>gi|340362261|ref|ZP_08684652.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Neisseria macacae
ATCC 33926]
gi|339887650|gb|EGQ77189.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Neisseria macacae
ATCC 33926]
Length = 924
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/894 (52%), Positives = 629/894 (70%), Gaps = 52/894 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L PE I++LI I+ APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPETEIDELINILQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILAEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLLSRAWRSGLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + L + Y LS+IQA IL+M L+ LT ++Q++I+ Y
Sbjct: 430 EDMLSRTDLDLRMARPEGLPANLGLQEQGYYLSEIQADAILRMSLRNLTGLDQEEIVGDY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DIL+ +RI +II +EL K +G RRSEI + + EDLI
Sbjct: 490 KNIMAKIIDFLDILAKPERITQIIREELEETKTNFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
+ G+VKK LS F N R GI A+ L D+L+GAA T GS DIMLFS+ GKA+RFNE
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAIALKEGDYLVGAAQTSGSDDIMLFSNLGKAIRFNEYW 721
Query: 718 ------------------------------------NSVRAMGRSARGVIGMRLEKKQKV 741
+ VR GR + G+ GMRL K+
Sbjct: 722 EKSGNDEAEDADIETEISDDLEDETADNENALPSGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAAQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 842 LVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGETLVSLERVAE 895
>gi|422590057|ref|ZP_16664715.1| DNA gyrase subunit A [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330877041|gb|EGH11190.1| DNA gyrase subunit A [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 928
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/892 (50%), Positives = 638/892 (71%), Gaps = 42/892 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILAQIGELIRILNSATRLMEVIREELELIRAEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R G+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E G+GKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGFGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIK 856
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+ + + ++
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERVQEPSEVE 886
>gi|330502868|ref|YP_004379737.1| DNA gyrase subunit A [Pseudomonas mendocina NK-01]
gi|328917154|gb|AEB57985.1| DNA gyrase subunit A [Pseudomonas mendocina NK-01]
Length = 922
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/895 (49%), Positives = 634/895 (70%), Gaps = 48/895 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++ N E ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVIDGCLALMDNAELTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA+ +E+ ++ R +++ ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YVRARVEVEDIDKVGGRQQLVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQ+Q+ FG+N++ALV+GQPK +NLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQMQSVFGINVVALVDGQPKTMNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWASSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VEAMVERAGADSCRPEGLDAQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N +R++E+I +EL +K ++G + RR+EII + + + DLI
Sbjct: 480 QEILALIGELIRILTNPERLMEVIREELEKVKAEFG----DARRTEIIASRQDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y AQ+RGG+GK A KDED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYEAQRRGGKGKSATGVKDEDYVEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL--------SNNKRDF-- 649
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + + D
Sbjct: 596 SKGKVYWLRTFEIPEASRAARGRPLVNLLPLDEGERITAMLQIDLEALQQSAGADEDLDD 655
Query: 650 -------------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKS 678
P ++FM+T+ G VKKT L FS PR +
Sbjct: 656 EGVVIEGEATEVVEAEEVEEVEGETPELVAEPTGAFIFMATAFGTVKKTPLVQFSRPRSA 715
Query: 679 GIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKK 738
G+IA+ L D LI AA+TDG+ ++MLFSD+GK +RF E+ VR MGR+ARGV GMRL K
Sbjct: 716 GLIALKLEEGDTLIAAAITDGAKEVMLFSDAGKVLRFAESKVRTMGRTARGVRGMRLGKD 775
Query: 739 QKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATL 798
Q++I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T++RNGK+V A
Sbjct: 776 QQLISMLIPESGAQ-ILTASERGFGKRTGLGKFPRRGRGGQGVIAMVTSERNGKLVGAIQ 834
Query: 799 VNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKIT 853
V EIMLI+ G L+RTRV E+ GR+TQGV LI + L G++R+ + T
Sbjct: 835 VQDGEEIMLISDQGTLVRTRVDEVSSSGRNTQGVTLIKLAKDETLVGLERVQEPT 889
>gi|119476907|ref|ZP_01617188.1| DNA gyrase subunit A [marine gamma proteobacterium HTCC2143]
gi|119449714|gb|EAW30951.1| DNA gyrase subunit A [marine gamma proteobacterium HTCC2143]
Length = 858
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/850 (52%), Positives = 630/850 (74%), Gaps = 14/850 (1%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
N + +++ + +E+E+ +SYLDY+MSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN+
Sbjct: 6 NAPSNQILPVNIEDELKQSYLDYSMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWNK 65
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAMR
Sbjct: 66 SYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQHFSLRYMLVDGQGNFGSIDGDSAAAMR 125
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L DLDKET+D++ NYDG E+ P+V+PT++PNLLINGSSGIAVGMATN
Sbjct: 126 YTEIRMRKISHEILADLDKETVDWVPNYDGTEQIPAVMPTKVPNLLINGSSGIAVGMATN 185
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL EV+ L ++ NP+ +I++LI+IIP PDFPTA II G + + Y TGKGR+
Sbjct: 186 IPPHNLNEVVTACLALIDNPDITIDELIEIIPGPDFPTAAIINGRAGIVQAYRTGKGRIY 245
Query: 242 IRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGM 301
IR++ +E + + III ELPYQVNK L+EKI++LVKEKK+E I+ LRDESDK G+
Sbjct: 246 IRSRAVVETNEKTGKDTIIISELPYQVNKARLIEKIAELVKEKKIEGIAELRDESDKDGL 305
Query: 302 RIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEV 361
R+VIE+KR E+ E+ LN LY QTQL+N FG+N++ALV+GQP+LLNLK++L YF+ HR+EV
Sbjct: 306 RVVIEMKRGEMGEVCLNNLYSQTQLENVFGINIVALVDGQPRLLNLKQLLEYFVRHRREV 365
Query: 362 IKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVS 421
+ RRT++ LR+ARE H+LEGL +A++NID I++I+S+ T EAK K+ W L DVS
Sbjct: 366 VTRRTVYLLRRARERGHLLEGLAVAISNIDRMIELIKSSDTTAEAKEKLSAQGWELGDVS 425
Query: 422 KIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
+++ + + + +++ + + Y LS Q Q IL M LQ+LT +E +K++ +Y
Sbjct: 426 QMLA---RAGESACRPDDLPENYGYIDGKYHLSPAQVQAILDMRLQKLTGLEHEKLLKEY 482
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++++ + IL ++ +++ +I +EL+ I N+YG RRSEII + + + EDLI
Sbjct: 483 QEKLEEIAEYLSILGDAVKLMTVIREELDAIVNEYGDE----RRSEIIESTRDLTAEDLI 538
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY K+Q +S+Y+AQ+RGG GK A KDED++ L IA+THD ILCFS
Sbjct: 539 TEEDRVVTISHGGYAKTQSLSDYQAQRRGGMGKSATAVKDEDFVEHLMIASTHDTILCFS 598
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G++YWLKV+ IP SRN+RG+P++N+ L E+IT ILP+ +++ + +Y+FM+T
Sbjct: 599 NVGKVYWLKVFHIPLASRNARGRPMVNLLPLGEDERITSILPV----KEYTEGHYIFMAT 654
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L+NF+ R G+ A+ L D LIG A+T+G+ D+MLFS SGKAVRFNEN
Sbjct: 655 ANGTVKKTELTNFARQRSVGLRALELEEGDVLIGTAVTNGTCDVMLFSSSGKAVRFNEND 714
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+A+GV G+R+ QK+I+LLV + + +L+ +ENGYGKR+ E+ RG K
Sbjct: 715 VRAMGRTAKGVRGIRMADGQKMISLLVPKDGGR-MLSVSENGYGKRSEFAEFATKGRGNK 773
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I ++ ++RNG+++ A V E+M+I+ G ++RTR EI +GR+TQGV +I ++
Sbjct: 774 GMIFMQASERNGEIIGAVQVFDGDELMMISDQGTMVRTRTDEISVLGRNTQGVRVIRLKE 833
Query: 840 KSKLCGVQRL 849
+ GV+R+
Sbjct: 834 GEHVVGVERI 843
>gi|307545311|ref|YP_003897790.1| DNA gyrase subunit A [Halomonas elongata DSM 2581]
gi|307217335|emb|CBV42605.1| DNA gyrase subunit A [Halomonas elongata DSM 2581]
Length = 899
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/874 (50%), Positives = 632/874 (72%), Gaps = 36/874 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ + +E+E+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 1 MGDIAREILPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLYAMHELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRHVLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ELL DL+K+T+D++ NYDG E+ P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARLAHELLADLEKDTVDWVDNYDGTERIPDVLPTKLPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EVIDG L ++ + S++DL++ IP PDFPT GII G + + + Y TG+GR+
Sbjct: 181 NIPPHNMVEVIDGCLALIDDYTLSVDDLMEYIPGPDFPTGGIINGRAGILEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R II+ ELPYQVNK L+EKI++LVK+K++E I+ LRDESDK G
Sbjct: 241 YVRARHTIEHDEKTGRDHIIVTELPYQVNKARLIEKIAELVKDKRIEGIAELRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE+KR E E+V+N L+ QTQLQN FG+NM+AL G+P+ LN+KE+L FI HR+E
Sbjct: 301 LRVVIEVKRGESGEVVVNNLFAQTQLQNVFGINMVALDGGEPRTLNIKEVLEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KARE HILEGLT+A++NID I++I+++ + EAK K++E W
Sbjct: 361 VVTRRTLFELKKARERGHILEGLTVAISNIDEVIELIKASPSANEAKEKLLERNWA---P 417
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM----YKLSDIQAQEILKMPLQRLTNMEQKKII 476
++ G ++ T K ++ + D Y+LS QAQ IL++ L RLT +E +K++
Sbjct: 418 GQVTGMLERAGATSCKPEDLEEGFGLDTAGKEYRLSPAQAQAILELRLHRLTGLETEKLL 477
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
++Y +++K+ +LT IL+++ R++E+I +EL +++++G RR+EI + ++ S E
Sbjct: 478 DEYLGILEKIAELTAILASADRLLEVIREELTAVRDQFG----ETRRTEIQASHLDLSIE 533
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLIA +DMV+T+S GY K+QP+S+Y+AQ+RGGRGK A KDED I L +A+THD +L
Sbjct: 534 DLIAEEDMVVTVSRSGYAKTQPLSDYQAQRRGGRGKSATSMKDEDVIEHLLVASTHDTVL 593
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
FSN G++YWLKV+++P SR SRGKP++N+ L+ E I ILP+ D+ ++Y+F
Sbjct: 594 LFSNRGKVYWLKVYEMPAASRGSRGKPLVNLLPLEEDEAINAILPV----HDYDPDSYIF 649
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
+T+ G VK+T L+ FS PR G+IA++L D L+GAA+T GS ML S +GKA+RF+
Sbjct: 650 FATAKGTVKRTSLAQFSRPRSVGLIAIDLEEGDRLVGAAITSGSDHAMLLSSNGKAIRFD 709
Query: 717 ENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQ---------------------KQSVL 755
E++VRAMGR+ARGV GMRL +VI+L++ +Q + +L
Sbjct: 710 ESNVRAMGRTARGVRGMRLLDGAEVISLIIPRSQLIDAEDQDDAAADSAEPLDAGQIYIL 769
Query: 756 TATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILI 815
TA+ENGYGKRT ++E+ RG +G+I+++T++RNG +VAA V E+MLIT G L+
Sbjct: 770 TASENGYGKRTRLEEFPLRGRGGQGVIAMQTSERNGSLVAAMQVYASDEMMLITDKGTLV 829
Query: 816 RTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
RTRV E+ R+TQGV+LI + L R+
Sbjct: 830 RTRVDEVSISSRNTQGVMLIRLGESESLVKTVRI 863
>gi|349609344|ref|ZP_08888741.1| DNA gyrase subunit A [Neisseria sp. GT4A_CT1]
gi|348612126|gb|EGY61750.1| DNA gyrase subunit A [Neisseria sp. GT4A_CT1]
Length = 924
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/894 (52%), Positives = 629/894 (70%), Gaps = 52/894 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L PE I++LI I+ APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPETEIDELINILQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILAEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLLSRAWRSGLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + S + L + Y LS+IQA IL+M L+ LT ++Q++I+ Y
Sbjct: 430 EDMLSRTDLDLRMASPEGLPANLGLQEQGYYLSEIQADAILRMSLRNLTGLDQEEIVGDY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ K+ID DIL+ +RI +II +EL K +G RRSEI + + EDLI
Sbjct: 490 KTIMAKIIDYLDILAKPERITQIIREELEETKTNFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
+ G+VKK LS F N R GI A+ L D+L+GAA T GS DIMLFS+ GKA+RFNE
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAIALKEGDYLVGAAQTSGSDDIMLFSNLGKAIRFNEYW 721
Query: 718 ------------------------------------NSVRAMGRSARGVIGMRLEKKQKV 741
+ VR GR + G+ GMRL K+
Sbjct: 722 EKSGNDEAEDADIETEILDDLEDETADNENALPNGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAAQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 842 LVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGETLVSLERVAE 895
Score = 42.7 bits (99), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDF-LIGAALTDGSYDIMLFSDSGK 711
V +T+ G K+T ++++S K G IA+N + L+ A L + D+ML + G
Sbjct: 798 VLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGGV 857
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYG 763
+R +R GR+A GV + L++ + +++L + + T EN G
Sbjct: 858 LIRTKVEQIRETGRAAAGVRLINLDEGETLVSLERVAEEAEDENTEVENPEG 909
>gi|422297740|ref|ZP_16385368.1| DNA gyrase subunit A [Pseudomonas avellanae BPIC 631]
gi|407990762|gb|EKG32773.1| DNA gyrase subunit A [Pseudomonas avellanae BPIC 631]
Length = 928
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/892 (50%), Positives = 638/892 (71%), Gaps = 42/892 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE+VLN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I++ W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V +++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLRGGK-YFLSPEQAQAILELRLHRLTGLEHEKLLGEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG + RR+EI+ ++ + DLI
Sbjct: 480 QEILAQIGELIRILNSATRLMEVIREELELIRAEYG----DARRTEILDARLDLTLGDLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL---SNNKR--------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +LP+ + KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMRKRADEEGEALE 655
Query: 648 -----------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN 684
D K ++FMST+ G VKKT L FS R G+IA+
Sbjct: 656 GELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLIALE 715
Query: 685 LSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I++
Sbjct: 716 LDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISM 775
Query: 745 LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
L+ Q +LTA+E G+GKRT I E+ ++ RG +G+I++ +N+RNG++V A V E
Sbjct: 776 LIPEEGSQ-ILTASERGFGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEE 834
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIK 856
IMLI+ G L+RTRV E+ +GR+TQGV LI + + KL G++R+ + + ++
Sbjct: 835 IMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERVQEPSEVE 886
>gi|350571734|ref|ZP_08940052.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Neisseria
wadsworthii 9715]
gi|349791314|gb|EGZ45201.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Neisseria
wadsworthii 9715]
Length = 925
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/891 (52%), Positives = 626/891 (70%), Gaps = 50/891 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
+ FAKE I + LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HHFAKETIPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD +Y+ +VRMAQ FSLR LVDGQGNFGSIDGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSPVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ +D L +L + E I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTVDACLKLLSDSETDIDELISIIRAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV++K LE IS+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVRDKVLEGISDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILGEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKGSADAPEAKEKLLARPWRSGLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + KL D Y LSD+QA IL+M L+ LT ++Q I+ Y
Sbjct: 430 EDMLSRTDLDLRMARPEGLSEKLGLQGDGYYLSDLQADAILRMSLRNLTGLDQDTIVTDY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ ++ID DIL+ +RI +II +EL IK +G + RRSEI + + EDLI
Sbjct: 490 KNIMAQIIDFLDILAKPERITQIIHEELEEIKANFG----DGRRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PPREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N+G+ +W+KV+++P+G RNSRG+PI N+ L EK++ IL + R+FP++ YVF +T
Sbjct: 606 NFGKCHWIKVYKLPEGGRNSRGRPINNVIQLDEGEKVSAILAV----REFPEDEYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
+ G+VKK LS F N R GI A+ L D L+G A T G DIMLFS+ GKA+RFNE
Sbjct: 662 AQGMVKKVQLSAFKNVRAQGIKAIALKEGDSLVGVARTSGISDIMLFSNLGKAIRFNEYY 721
Query: 718 ---------------------------------NSVRAMGRSARGVIGMRLEKKQKVIAL 744
N VR GR + G+ GMRL + ++++L
Sbjct: 722 DRNGDADEVENEDSDNVLEHEGEENGDTSAFKGNGVRPSGRGSGGLRGMRLPSEGRIVSL 781
Query: 745 L-----VSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLV 799
+ ++ VLTATENGYGKRT I +Y++ +G +G I+I T +RNG++VAATLV
Sbjct: 782 ITFSPECEQDETLQVLTATENGYGKRTPIADYSRKGKGGQGNIAINTGERNGELVAATLV 841
Query: 800 NRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
+ ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+
Sbjct: 842 AQTDDLMLITSGGVLIRTKVDQIRETGRAAAGVRLINLDEGETLVSLERVA 892
>gi|386389517|ref|ZP_10074331.1| DNA gyrase, A subunit [Haemophilus paraphrohaemolyticus HK411]
gi|385695287|gb|EIG25849.1| DNA gyrase, A subunit [Haemophilus paraphrohaemolyticus HK411]
Length = 884
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/879 (51%), Positives = 628/879 (71%), Gaps = 38/879 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + NN +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNNNTYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+DF NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N E SI++L++ IP PDFPT +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEEISIDELMQYIPGPDFPTGALINGRKGIVDAYQTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE ++ R I++ ELPYQVNK L+EKI++L+K+KK+E IS + D SDK G
Sbjct: 241 YVRAKASIETTDK-GREHIVVTELPYQVNKAKLIEKIAELIKDKKIEGISKIDDYSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL NGQPK+LNLK+I+ FI HR+E
Sbjct: 300 ISIVIEVKRDAVAEVVLNHLYSLTQMQVTFGINMVALDNGQPKVLNLKQIIAAFIKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL I+L NID I +IR++ T +EA+ ++ +W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAISLANIDPVIALIRNSKTAEEAREGLLSRSWELGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + ++ ++ Y LS+ QA+ IL++ L RLT +E +KI+++Y+
Sbjct: 420 AAMLDAAGVDASRPEDLPEHLGVRGSEYY-LSEAQARAILELRLHRLTGLEHEKIVDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL+++ R++E+I +EL ++K +G RR+EI + + + EDLIA
Sbjct: 479 ELLTEIAELLHILNSADRLMEVIREELEVVKASFGDE----RRTEITAASGDINLEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYVFMS 658
GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + +VFM+
Sbjct: 595 RGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFVFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G+VKK L FSN R +G+IA+ L D LIG +T+G +IMLFS G+ VRF E
Sbjct: 653 TASGVVKKVALDAFSNVRANGLIALTLREGDELIGVDITNGESEIMLFSAQGRVVRFEEK 712
Query: 719 SVRAMGRSARGVIGMRLEKKQ---------------------------KVIALLVSNNQK 751
+VRAMGR+A GV G++L + KV++L++ + +
Sbjct: 713 AVRAMGRTATGVRGIKLATTEISDEVEEAEIVDIESEESDESINLNTDKVVSLVIPHTEG 772
Query: 752 QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTG 811
+LT T+NGYGKRT++ EY +R TKG++SIK N+RNGKVVAA V +IMLIT
Sbjct: 773 -DILTVTQNGYGKRTVLAEYPVKSRATKGVVSIKVNERNGKVVAAVQVAETDQIMLITDA 831
Query: 812 GILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
G L+RTRVSE+ +GR+TQGV +I ++ ++R+C
Sbjct: 832 GTLVRTRVSEVSLVGRNTQGVRIIRTAEDEQVVSLERIC 870
>gi|388545950|ref|ZP_10149229.1| DNA gyrase subunit A [Pseudomonas sp. M47T1]
gi|388276067|gb|EIK95650.1| DNA gyrase subunit A [Pseudomonas sp. M47T1]
Length = 880
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/850 (50%), Positives = 630/850 (74%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++E+L DL KET+D++ NYDG E P+V+PTRIP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHEILSDLHKETVDWVPNYDGTELIPAVMPTRIPTLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNADITVDELMQFIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I++ ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSTVEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE++LN L+ QTQ+Q FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVILNNLFAQTQMQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALINTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VVAMVEAAGAQSSRPENLDPQFGLREGK-YWLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L ILS+++R++E+I +EL +I+ ++G ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILSSAERLMEVIREELEVIRAEFG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLK ++IP+ SR +RG+P++N+ L++ E IT +LP+ ++ + +++FM+T
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLEDGEYITTMLPVE----EYTEGHFIFMAT 651
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT L +FS R G+IA+ L D LI AA+TDG ++MLFSD GK RF E+
Sbjct: 652 ANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESD 711
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV GMRL + QK+I++L+ Q +LTA+ GYGKRT I E+ ++ RG +
Sbjct: 712 VRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ-ILTASARGYGKRTAIGEFPEYKRGGQ 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ +N+RNG++V A V EIMLI+ G L+RTRV E+ +GR+TQGV LI + +
Sbjct: 771 GVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAS 830
Query: 840 KSKLCGVQRL 849
L G++R+
Sbjct: 831 DETLVGLERV 840
>gi|15839141|ref|NP_299829.1| DNA gyrase subunit A [Xylella fastidiosa 9a5c]
gi|9107763|gb|AAF85349.1|AE004062_4 DNA gyrase subunit A [Xylella fastidiosa 9a5c]
Length = 893
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/883 (51%), Positives = 631/883 (71%), Gaps = 44/883 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDG+KPVHRRVL+AMHE+ +
Sbjct: 1 MAETAKEIIKVNLEDEMRKSYLDYAMSVIVGRALPDARDGMKPVHRRVLYAMHELGAHSD 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR++GE +GKYHPHGD S+YD LVRMAQ FSLR LV+GQGNFGS+DGD AAAM
Sbjct: 61 KSYFKSARIIGEVLGKYHPHGDQSVYDTLVRMAQPFSLRYLLVEGQGNFGSVDGDPAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++IS++L+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTESRMSRISHDLMADIDKETVDFQPNYDEKETEPTVMPTRFPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E I+ + ++ NPE ++ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLVESINACIALIDNPELDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + R AI++ E+PYQVNK L+EKI++LVKEK+++ IS LRDESDK G
Sbjct: 241 RMRAKADIEVAD-NGREAIVVTEIPYQVNKARLIEKIAELVKEKRIDGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+LLNLK+IL FI HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLLNLKQILQAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I +I+++ +PQEAK +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIHLIKTSPSPQEAKERLLAKTWAPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + + L D Y+L+++Q ++IL+M L RLT +EQ K+ +Y+
Sbjct: 420 GTLLSASGGEASRPEDLPQGVGLI-GDSYQLTEVQVRQILEMRLHRLTGLEQDKLAEEYQ 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ ++ L IL N ++++I DEL I+ +YG ++RR+EI + + DLIA
Sbjct: 479 QLLEIIVGLIRILENPDVLLQVIRDELLKIREEYG----DVRRTEIRHSEEDLDILDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY K QP+S YRAQKRGGRG+ A+ TK+ED+I+ L++ NTHD +L F++
Sbjct: 535 PEDVVVTLSHAGYAKRQPVSAYRAQKRGGRGRAAVTTKEEDFIDHLWLVNTHDTLLTFTS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++WL V+Q+P+ N+RG+PIIN L+ EK+ +LP+ R++ +N+YVF +T
Sbjct: 595 TGKVFWLSVYQLPEAGSNARGRPIINWIPLEPGEKVQAVLPV----REYAENHYVFFATR 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT LS F+ G IA+NL D LIG ALTDG D++LF+ +GK VRF+EN+V
Sbjct: 651 QGTVKKTPLSEFAFRLARGKIAINLDQGDALIGVALTDGERDVLLFASNGKTVRFSENTV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSN----------------------NQKQSV---- 754
R+MGR+A GV G++L + ++V++L+++ N SV
Sbjct: 711 RSMGRTATGVRGIKLTEGEEVVSLIIAEPATGVDMLEEAEETADDDIQTANTADSVHIDP 770
Query: 755 --------LTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
LTATENGYGK T + Y + RGT+G+I I+T +RNG++VAA L+ E++
Sbjct: 771 TQDDILCILTATENGYGKCTPLAHYPRKGRGTQGVIGIQTTERNGRLVAAVLLGATDEVL 830
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
LI+ GG L+RTR SEI ++GR+TQGV LI + N KL V+RL
Sbjct: 831 LISDGGTLVRTRGSEISRVGRNTQGVTLIRLSNGEKLQAVERL 873
>gi|406946170|gb|EKD77452.1| hypothetical protein ACD_42C00328G0002 [uncultured bacterium]
Length = 848
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/847 (53%), Positives = 621/847 (73%), Gaps = 10/847 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE+ +I +E E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MTDLAKEITTITIESELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+ AAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++ +++LL D+DKET+DF NYD EK P+VLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSQFAHDLLADIDKETVDFQLNYDETEKMPAVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+E+ID L ++ N E +I++L++ +P PDFPTAGI+ G + + Y TG+G++
Sbjct: 181 NIPPHNLSEIIDATLALIDNSELTIDELMRYVPGPDFPTAGIVNGRAGIVRAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAKT IE + NR +II+ ELPYQVNK LLE++ +LV++K +E I LRDESDKSG
Sbjct: 241 YVRAKTDIETNEKTNRVSIIVHELPYQVNKARLLERMGELVRDKLIEGIVGLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIE++R + PE+VLN L+ QTQLQ FG+NM+AL NG+P++++LK IL F+ HR+E
Sbjct: 301 MRMVIEVRRGDQPEVVLNNLFSQTQLQVVFGINMVALYNGRPQVMDLKFILNAFLQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIF L KA++ AHILEGL IAL NID + +I+S TP +AK ++ W L V
Sbjct: 361 VVTRRTIFLLAKAKDRAHILEGLGIALVNIDEMVALIKSAKTPNDAKELLLAKAWVLGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++++ N + + + LQ+ Y LS QAQ IL + L RLT +E KI ++Y+
Sbjct: 421 AQLLSKAGANQTRPNDLADNYGLQDGKYY-LSPEQAQAILDLRLHRLTGLETDKIHDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+I+ + L +ILSN R+ +I +EL +IK ++G + RR+ I+ N + S EDLI
Sbjct: 480 QLIEDINALVEILSNPDRLHTVIREELTVIKTQFG----DARRTVILENQEDLSNEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GYIK+Q + Y AQ RGGRGK+A K+ED++ L +AN+H ILCFS
Sbjct: 536 VEDLVVTLSHEGYIKAQSLESYDAQHRGGRGKRATSVKEEDYVKNLLVANSHHTILCFST 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ YWLK +Q+PQG R +RG+PI+N+ L+ E IT ILP++ F +N+++FM+T
Sbjct: 596 MGKAYWLKTYQVPQGGRVARGQPIVNLLPLEKDELITAILPVAQ----FDENHFIFMATQ 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKK L+ F N R +G IA++L+ D LIG ALTDG DIML SD+GKA+RF+E +V
Sbjct: 652 NGTVKKVALTEFENARSNGKIALSLNEGDRLIGVALTDGKQDIMLVSDAGKAIRFSEEAV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A G+ G++L+ QK+IAL++ + ++LT TENGYG+RT + +Y + RG +G
Sbjct: 712 RAMGRTATGIRGIKLKNDQKLIALIIP-KKDGTILTVTENGYGQRTEVNDYRECGRGGQG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+T RNG+VV + V + EI+L+T GG L+R V+EI +GR+TQGV LI V+
Sbjct: 771 VIAIQTTDRNGRVVGSIPVQQDSEILLVTNGGTLVRIPVAEINVIGRNTQGVRLINVQEG 830
Query: 841 SKLCGVQ 847
K+ V+
Sbjct: 831 EKVVSVE 837
>gi|344337580|ref|ZP_08768514.1| DNA gyrase, A subunit [Thiocapsa marina 5811]
gi|343802533|gb|EGV20473.1| DNA gyrase, A subunit [Thiocapsa marina 5811]
Length = 868
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/838 (53%), Positives = 620/838 (73%), Gaps = 13/838 (1%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
M +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M E N+WNR + K ARVVG+ MGK
Sbjct: 1 MRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMSEQGNVWNRAYRKSARVVGDVMGK 60
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGD +IYD +VRMAQ FS+R LVDGQGNFGS+DGD AAMRYTE R+ +I++ LL
Sbjct: 61 YHPHGDSAIYDTMVRMAQRFSMRYLLVDGQGNFGSVDGDPPAAMRYTEVRMTRIADALLD 120
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
DLDK+T+DFI NYD E EP VLP R PNLL+NGSSGIAVGMATNIPPHNL EVID L
Sbjct: 121 DLDKDTVDFIPNYDNTEHEPVVLPARFPNLLVNGSSGIAVGMATNIPPHNLREVIDACLA 180
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
++ NP +I++L+ ++P PDFPTA +I G+ + + Y TG+GR +IRA+T IE R R
Sbjct: 181 LIDNPSITIDELMVLVPGPDFPTAALINGVRGIREAYRTGRGRAVIRARTMIEVQKRSGR 240
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISN--LRDESDKSGMRIVIELKRNEIPE 314
AI++ ELPYQVNK LLE+I++LVKEKK+E I+ LRDESDK GMR+VIELKR+ E
Sbjct: 241 EAIVVTELPYQVNKARLLERIAELVKEKKIEGIAQDGLRDESDKDGMRVVIELKRDAYAE 300
Query: 315 IVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAR 374
++L LY+ TQ+Q FG+NM+ALV+GQP+ LNLK+IL YFI HR++V+ RRT+FELRKAR
Sbjct: 301 VLLANLYQHTQMQQVFGINMVALVDGQPRTLNLKQILEYFIRHRRDVVTRRTLFELRKAR 360
Query: 375 EYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTI 434
+ AH+LEG IAL NID I +I++++ P EA+ ++ TW V+ ++
Sbjct: 361 DRAHVLEGYAIALANIDEIIALIKASANPAEAREGLMARTWAPGSVTGMLERAGAEQTRP 420
Query: 435 SKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILS 494
+++ L + Y+LS+ QA+ IL + LQRLT +EQ KI+++++ ++ K+ L ILS
Sbjct: 421 EELDAAFGLVDGG-YRLSERQAKAILDLQLQRLTGLEQDKILDEFKEILDKIAALLLILS 479
Query: 495 NSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYI 554
S R++++I +EL I++++G RR+EI ++ + + ED+IA +++V+T+S+ GY+
Sbjct: 480 ESDRLMDVIREELTAIRDQFGDD----RRTEIQVDHTDLTLEDMIAPEEVVVTMSHQGYV 535
Query: 555 KSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQ 614
K+QPIS+Y+AQ+RGG+GK A K+ED+I+++F+AN+ D +LCFS+ GR+YWLKV+++PQ
Sbjct: 536 KAQPISDYQAQRRGGKGKSATSFKEEDFIDRIFVANSRDTVLCFSSRGRVYWLKVYELPQ 595
Query: 615 GSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSN 674
R +RG+P++N+ L+ E+I +LP+ RD+ +VFM+TS G VKKT L +FS
Sbjct: 596 AGRGARGRPMVNLLPLEAGERINAVLPV----RDYESGYFVFMATSAGTVKKTPLGDFSR 651
Query: 675 PRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMR 734
P GIIA++L +++LIG A+TDG D+MLF+ +GKAVRF+E +VRAMGR+A GV G++
Sbjct: 652 PLSRGIIAIDLHEDEYLIGVAITDGKQDLMLFTSAGKAVRFSEGAVRAMGRTAHGVRGVQ 711
Query: 735 LEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVV 794
L QKVI+LLV+ + +VL+ TENG+GKRT ++++ RGTKG+I I T++RNG V
Sbjct: 712 LAPGQKVISLLVA--EPGTVLSVTENGFGKRTRVEDFPTKGRGTKGVIGISTSERNGAQV 769
Query: 795 AATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
A LV EIMLIT GG LIRT + +I +GRS QGV LI + +L ++R+ +
Sbjct: 770 GAVLVRPDDEIMLITEGGTLIRTPIDQIPVVGRSAQGVKLINLGEGERLVYLERIVAL 827
>gi|331005940|ref|ZP_08329286.1| DNA gyrase subunit A [gamma proteobacterium IMCC1989]
gi|330420235|gb|EGG94555.1| DNA gyrase subunit A [gamma proteobacterium IMCC1989]
Length = 869
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/853 (52%), Positives = 623/853 (73%), Gaps = 11/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A +V + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MGDLAHDVSPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR L+DGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYPLIDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+DF+ NYDG E+ PSVLPTR+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMKKLAHELLADLEKETVDFVPNYDGSEQIPSVLPTRVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+ G L + N + +I++L++IIP PDFPT I G + + Y TG+GR+
Sbjct: 181 NIPPHNLKEVVRGCLAFIENEDITIDELMEIIPGPDFPTGATINGRAGIVQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK H+E ++ N+ III E+PYQ+NK L+E+I++LVKEKK+E IS LRDES K
Sbjct: 241 YVRAKAHVERNDKTNKETIIITEIPYQLNKAKLIERIAELVKEKKIEGISELRDESTKD- 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIELKR EI +++LN LY QTQ++ FG+N++ALV+GQPK+LNLK++L F+ HR+E
Sbjct: 300 IRVVIELKRGEIGDVILNNLYAQTQMEGVFGINVVALVDGQPKILNLKQLLECFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ LRKARE HILEGL +A+ NID I +I+++ +P EA+ ++ W V
Sbjct: 360 VVTRRTIYLLRKARERGHILEGLAVAIANIDEVITLIKNSPSPAEAREGLLSRGWESASV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + + L+ ++ Y LS QAQ IL++ L RLT ME K++++Y+
Sbjct: 420 AQFLERAGADACRPEGLGPEFGLR-DEKYYLSPAQAQAILELRLHRLTGMEHDKLLDEYQ 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+ ++ + +IL +S R++E+I +EL I+ YG RR++I + + + EDLI
Sbjct: 479 EKVARIAEFLEILGSSTRLMEVIREELEEIEKNYGDE----RRTDIQSSKRDLTIEDLIT 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+T+S+ GY K+Q +S+Y+AQ+RGG GK A KDED++ L IA+THD ILCF+N
Sbjct: 535 EEDRVVTISHGGYAKTQALSDYQAQRRGGTGKAATSVKDEDFVEHLLIASTHDTILCFTN 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+QIP R SRG+PIIN+ L E+IT ILP+ R++ +++++FM+T+
Sbjct: 595 AGKVYWLKVFQIPLAGRQSRGRPIINLLPLDESERITSILPV----REYDEDHFIFMATA 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L+ F+ PR SG+ A++L ++ L+G A+TDG+ D+MLFS GKAVRFNEN V
Sbjct: 651 NGTVKKTPLTQFARPRTSGLRAIDLEEDNHLVGTAVTDGNSDVMLFSSEGKAVRFNENDV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR++RGV G+RL + +VI++++ + VLT +ENGYGKRT + EY R KG
Sbjct: 711 RSMGRTSRGVRGIRLAEGYEVISMVLPTEDGK-VLTVSENGYGKRTKVDEYATKGRAGKG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+++T++RNGKVV A V EIMLI+ G ++RT V E+ GR+TQGV +I V++
Sbjct: 770 MIAMQTSERNGKVVGAVQVFDGDEIMLISDQGTMVRTHVDEVSVSGRNTQGVRVIKVKDG 829
Query: 841 SKLCGVQRLCKIT 853
L GV+R+ I
Sbjct: 830 EHLMGVERIESIA 842
>gi|71275186|ref|ZP_00651473.1| DNA gyrase, subunit A [Xylella fastidiosa Dixon]
gi|170731177|ref|YP_001776610.1| DNA gyrase subunit A [Xylella fastidiosa M12]
gi|71163995|gb|EAO13710.1| DNA gyrase, subunit A [Xylella fastidiosa Dixon]
gi|71730415|gb|EAO32496.1| DNA gyrase, subunit A [Xylella fastidiosa Ann-1]
gi|167965970|gb|ACA12980.1| DNA gyrase subunit A [Xylella fastidiosa M12]
Length = 893
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/883 (51%), Positives = 631/883 (71%), Gaps = 44/883 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDG+KPVHRRVL+AMHE+ +
Sbjct: 1 MAETAKEIIKVNLEDEMRKSYLDYAMSVIVGRALPDARDGMKPVHRRVLYAMHELGAHSD 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR++GE +GKYHPHGD S+YD LVRMAQ FSLR LV+GQGNFGS+DGD AAAM
Sbjct: 61 KSYFKSARIIGEVLGKYHPHGDQSVYDTLVRMAQPFSLRYLLVEGQGNFGSVDGDPAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++IS++L+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTESRMSRISHDLIADIDKETVDFQPNYDEKETEPTVMPTRFPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E I+ + ++ NPE ++ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLVESINACIALIDNPELDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + R AI++ E+PYQVNK L+EKI++LVKEK+++ IS LRDESDK G
Sbjct: 241 RMRAKADIEVAD-NGREAIVVTEIPYQVNKARLIEKIAELVKEKRIDGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+LLNLK+IL FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLLNLKQILQAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I +I+++ +PQEAK +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIHLIKTSPSPQEAKERLLAKTWAPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + + L D Y+L+++Q ++IL+M L RLT +EQ K+ +Y+
Sbjct: 420 GTLLSASGGEASRPEDLPQGVGLI-GDSYQLTEVQVRQILEMRLHRLTGLEQDKLAEEYQ 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ ++ L IL N ++++I DEL I+ +YG ++RR+EI + + DLIA
Sbjct: 479 QLLEIIVGLIRILENPDVLLQVIRDELLKIREEYG----DVRRTEIRHSEEDLDILDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY K QP+S YRAQKRGGRG+ A+ TK+ED+I+ L++ NTHD +L F++
Sbjct: 535 PEDVVVTLSHAGYAKRQPVSAYRAQKRGGRGRAAVTTKEEDFIDHLWLVNTHDTLLTFTS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++WL V+Q+P+ N+RG+PIIN L+ EK+ +LP+ R++ +N+YVF +T
Sbjct: 595 TGKVFWLSVYQLPEAGSNARGRPIINWIPLEPGEKVQAVLPV----REYAENHYVFFATR 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT LS F+ G IA+NL D LIG ALTDG D++LF+ +GK VRF+EN+V
Sbjct: 651 QGTVKKTPLSEFAFRLARGKIAINLDQGDALIGVALTDGERDVLLFASNGKTVRFSENTV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSN----------------------NQKQSV---- 754
R+MGR+A GV G++L + ++V++L+++ N SV
Sbjct: 711 RSMGRTATGVRGIKLTEGEEVVSLIIAEPATGVDMLEEAEETADDDIQTANTADSVHIDP 770
Query: 755 --------LTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
LTATENGYGK T + Y + RGT+G+I I+T +RNG++VAA L+ E++
Sbjct: 771 TQDDILCILTATENGYGKCTPLAHYPRKGRGTQGVIGIQTTERNGRLVAAVLLGATDEVL 830
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
LI+ GG L+RTR SEI ++GR+TQGV LI + N KL V+RL
Sbjct: 831 LISDGGTLVRTRGSEISRVGRNTQGVTLIRLSNGEKLQAVERL 873
>gi|390950437|ref|YP_006414196.1| DNA gyrase subunit A [Thiocystis violascens DSM 198]
gi|390427006|gb|AFL74071.1| DNA gyrase subunit A [Thiocystis violascens DSM 198]
Length = 885
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/854 (52%), Positives = 627/854 (73%), Gaps = 13/854 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FA+EVI I LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M E N+WN
Sbjct: 1 MPDFAREVIPINLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMSEQGNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K ARVVG+ MGKYHPHGD +IYD +VRMAQ FSLR LVDGQGNFGS+DGD AAM
Sbjct: 61 RAYRKSARVVGDVMGKYHPHGDSAIYDTMVRMAQRFSLRYLLVDGQGNFGSVDGDPPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ LL DLDKET++FI NYD E EP+VLP R PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMMRLADALLDDLDKETVEFIPNYDNTEHEPTVLPARFPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVID L ++ NP +I ++++I+P PDFPTA +I G+ + + Y TG+GR
Sbjct: 181 NIPPHNLREVIDACLAIIENPLITIEEIMEIVPGPDFPTAALINGVRGIREAYRTGRGRC 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISN--LRDESDK 298
++RA+T E R R AI++ E+PYQVNK LLE+I++LVKEKK++ I+ LRDESDK
Sbjct: 241 VMRARTITEAQKRSGREAIVVTEIPYQVNKARLLERIAELVKEKKIDGIAQDGLRDESDK 300
Query: 299 SGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHR 358
GMRIVIELKR+ E++LN LY+ TQ+Q FG+NM+ALV+GQP LNLK+IL YF+ HR
Sbjct: 301 DGMRIVIELKRDAHAEVLLNNLYQHTQMQQVFGINMVALVDGQPLTLNLKQILEYFLRHR 360
Query: 359 KEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLP 418
++V+ RR +FELRKAR AH+LEG IAL NID I I+++++P +A+ +++ W L
Sbjct: 361 RDVVTRRILFELRKARNRAHVLEGYAIALANIDEVIATIKASASPGDARERLMTRAWALG 420
Query: 419 DVSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
V+ ++ + + L + Y+LS+ QA+ IL + L RLT +EQ+KI+ +
Sbjct: 421 AVTGMLARAGADQTRPEDLEREFGLTDAG-YRLSERQAKAILDLQLHRLTGLEQEKILKE 479
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
+E ++ ++ L ILS+ R++E+I +EL I+ ++G + RR+EI ++ + + EDL
Sbjct: 480 FEEILDRIAALLLILSDPDRLMEVIREELVAIREQFG----DARRTEIQVDHTDLTLEDL 535
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K+QPIS+Y+AQ+RGG+GK A ++ED+I+++F+AN+ D +LCF
Sbjct: 536 ITPEDVVVTLSHQGYVKAQPISDYQAQRRGGKGKSATSFREEDFIDRIFVANSLDTVLCF 595
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YWLKV+++P R +RG+P++N+ L+ E+I +LP+ R++ + +VFM+
Sbjct: 596 SSRGRVYWLKVYELPHSGRGARGRPMVNLLPLEPGERINALLPI----REYEEGLFVFMA 651
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
TS G VKKT L++FS P GIIA++L ++ L+G +TDG D+MLF+ +GKAVRF+E+
Sbjct: 652 TSAGTVKKTPLTDFSRPLSRGIIAIDLREDEVLVGVVITDGKRDLMLFTSNGKAVRFSED 711
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR MGR+A GV G+RL+ Q+VI+LLV + +VL+ TENGYGKRT ++++ RGT
Sbjct: 712 HVRVMGRTAHGVRGVRLQDGQRVISLLVP--EPGTVLSVTENGYGKRTRVEDFPTKGRGT 769
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I I T++RNG V A LV EIMLIT GG LIRT V +I +GRS QGV LI +
Sbjct: 770 QGVIGISTSERNGAQVGAVLVRPGDEIMLITEGGTLIRTTVDQIPVVGRSAQGVKLINLG 829
Query: 839 NKSKLCGVQRLCKI 852
+ +L V+R+ +
Sbjct: 830 DGERLVYVERIVAL 843
>gi|417958780|ref|ZP_12601693.1| DNA gyrase, A subunit [Neisseria weaveri ATCC 51223]
gi|343966592|gb|EGV34848.1| DNA gyrase, A subunit [Neisseria weaveri ATCC 51223]
Length = 915
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/892 (52%), Positives = 631/892 (70%), Gaps = 57/892 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
+ FAKE I I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HHFAKETIPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + I+ L +L +P+ I+ LI I APDFPT IYG+S V +GY TG+GRV+
Sbjct: 190 IPPHNLPDTINACLQLLADPQTDIDVLINTIKAPDFPTGATIYGMSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV++K LE IS+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVRDKVLEGISDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL FI HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILSEFIRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID IQ+I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIQLIKESADAPEAKEKMLARPWRSALV 429
Query: 421 SKIIGFNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ + T+++ N+ LQ N Y LS++QA IL+M L+ LT ++Q +I+
Sbjct: 430 EEMLSRTDLDL-TMARPENLPAGLGLQQNG-YFLSELQADAILRMSLRNLTGLDQDEIVR 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ +IDL DIL+ S+RI EII EL +K ++G RRSEI + + ED
Sbjct: 488 DYKNIMANIIDLLDILAKSERIDEIIRTELEEVKAQFGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPPREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N+G+ +W+KV+++P+G RNSRG+PI N+ L EK++ ILP+ R+FP++ YVF
Sbjct: 604 FTNFGKCHWIKVYKLPEGGRNSRGRPINNVIQLDEGEKVSAILPV----REFPEDEYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D L+G A T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKIQLSAFKNVRSQGIKAIALKEGDHLVGVAKTGGNDDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
N VR GR + G+ GMRL
Sbjct: 720 YWERSNEVEDADSENEDSDGIETDAAEDDSNETAAPKANGVRPSGRGSGGLRGMRLPSDG 779
Query: 740 KVIALLVSNNQKQ-----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVV 794
++++L+ + + + VLTATENGYGKRT I +Y++ +G +G I+I T +RNG++V
Sbjct: 780 RIVSLITFSPECEQDAALQVLTATENGYGKRTPIADYSRKGKGGQGNIAINTGERNGELV 839
Query: 795 AATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
AATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L +
Sbjct: 840 AATLVAETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSL 891
>gi|261365069|ref|ZP_05977952.1| DNA gyrase, A subunit [Neisseria mucosa ATCC 25996]
gi|288566489|gb|EFC88049.1| DNA gyrase, A subunit [Neisseria mucosa ATCC 25996]
Length = 921
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/894 (52%), Positives = 629/894 (70%), Gaps = 52/894 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ ++ L +L PE I++LI I+ APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTVNACLRLLDEPETEIDELINILQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLLSRAWRSGLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + L + Y LS+IQA IL+M L+ LT ++Q++I+ Y
Sbjct: 430 EDMLSRTDLDLRMARPEGLPANLGLQEQGYYLSEIQADAILRMSLRNLTGLDQEEIVGDY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DIL+ +RI +II +EL K +G RRSEI + + EDLI
Sbjct: 490 KNIMAKIIDFLDILAKPERITQIIREELEETKTNFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
+ G+VKK LS F N R GI A+ L D L+GAA T GS DIMLFS+ GKA+RFNE
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAIALKEGDCLVGAAQTSGSDDIMLFSNLGKAIRFNEYW 721
Query: 718 ------------------------------------NSVRAMGRSARGVIGMRLEKKQKV 741
+ VR GR + G+ GMRL K+
Sbjct: 722 EKSGNDEAEDADIETEISDDLEDETADNENALPSGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAAQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ +L ++R+ +
Sbjct: 842 LVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGEQLVSLERVAE 895
>gi|387770041|ref|ZP_10126232.1| DNA gyrase, A subunit [Pasteurella bettyae CCUG 2042]
gi|386905388|gb|EIJ70156.1| DNA gyrase, A subunit [Pasteurella bettyae CCUG 2042]
Length = 882
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/882 (52%), Positives = 632/882 (71%), Gaps = 45/882 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + +++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M++ N +N
Sbjct: 1 MTELVQDITPVSIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMNQSGNTYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ +VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KAYVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+DF NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N SI++L++ IP PDFPTA +I G + + Y TG+G+V
Sbjct: 181 NIPPHNLGEVMDGCLAYMDNENISIDELMQFIPGPDFPTAALINGRKGIEEAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK + E N + R III E+PYQVNK L+EKI +LV++KK+E IS + D S K G
Sbjct: 241 YVRAKASV-ETNDKGREQIIITEIPYQVNKAKLVEKIGELVRDKKIEGISGILDLSSKEG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+ I++KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPKL NLK+I+ F+ HR+E
Sbjct: 300 IRLEIDIKRDTVGEVVLNNLYALTQMQITFGINMVALDHGQPKLFNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ +WNL +V
Sbjct: 360 VVTRRTVYELRKARERAHILEGLAIALANIDPVIELIRASKTADEAREALLARSWNLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + ++ + +N Y LSD QA+ IL++ L RLT +E +KI+
Sbjct: 420 APMLEAAGVDSSRPDGLAAELGV----HNGQYFLSDTQARAILELRLHRLTGLEHEKIVE 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y ++ ++ +L IL+++ R+ E+I +EL ++K+ Y + R +EI + + + ED
Sbjct: 476 EYHEILVQIGELIHILTSAIRLNEVIREELELVKDTY----NDARCTEITAASGDINLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHEGYVKYQPLADYEAQRRGGKGKSATKMKEEDFIERLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYWLKV+Q+P+ SR SRG+PI+N+ L++ E+IT ILP++ + ++ +V M
Sbjct: 592 FSSRGRLYWLKVYQLPEASRGSRGRPIVNILPLEDNERITAILPIAG----YDEDKFVVM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ GIVKKT L+ FS PR +GIIAVNL +ED LIG +TDGS +IMLFS G+ VRF E
Sbjct: 648 ATAGGIVKKTALTEFSRPRANGIIAVNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAE 707
Query: 718 NSVRAMGRSARGVIGMRLE----------------------------KKQKVIALLVSNN 749
+VRAMGR+A GV G++L KV++L+V N
Sbjct: 708 TAVRAMGRTATGVRGIKLALTNDLSDDESAVEIEEISDDNAEESLDLNVDKVVSLVVPKN 767
Query: 750 QKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLIT 809
+ ++LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT
Sbjct: 768 EG-AILTATQNGYGKRTQLAEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLIT 826
Query: 810 TGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
G L+RTRVSE+ +GR+TQGV LI + ++ ++R+ +
Sbjct: 827 DAGTLVRTRVSEVSIVGRNTQGVRLIRTAEEEQVVSLERVAE 868
>gi|329119708|ref|ZP_08248388.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464157|gb|EGF10462.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Neisseria
bacilliformis ATCC BAA-1200]
Length = 929
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/896 (51%), Positives = 632/896 (70%), Gaps = 54/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLVDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ ++ L++L PE I++LI I+ APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTVNACLHLLDAPETDIDELINILQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI LV++K LE I++LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGDLVRDKTLEGIADLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLLARAWRSSLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++G + + L + Y LS+IQA IL+M L+ LT ++Q++I+ Y
Sbjct: 430 EDMLGRTDLDLRMARPEGLPANLGLQGEGYYLSEIQADAILRMSLRNLTGLDQEEIVGDY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DIL+ +RI +II +EL IK +G + R+SEI + + EDLI
Sbjct: 490 KNIMAKIIDFLDILAKPERITQIIREELEEIKTGFG----DGRKSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
+ G+VKK LS F N R GI A+ L +D L+G A T GS DIMLFS+ GKA+RFNE
Sbjct: 662 AQGMVKKVQLSAFKNVRAQGIKAIALKEDDCLVGVAKTGGSDDIMLFSNLGKAIRFNEFW 721
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
+ VR GR + G+ GMRL +
Sbjct: 722 EKTGSDDAEETDNENDVSDDLSDSEDEEGGDTAAISGKHGVRPSGRGSGGLRGMRLPENG 781
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
++++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 782 RIVSLITFAPECEQGDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 841
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ +L ++R+ +
Sbjct: 842 ATLVGESDDLMLITSGGVLIRTKVDQIRETGRAAAGVKLINLDEGEQLVSLERVAE 897
Score = 45.1 bits (105), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDF-LIGAALTDGSYDIMLFSDSGK 711
V +T+ G K+T ++++S K G IA+N + L+ A L S D+ML + G
Sbjct: 800 VLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGESDDLMLITSGGV 859
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
+R + +R GR+A GV + L++ +++++L + + TA E+ T E
Sbjct: 860 LIRTKVDQIRETGRAAAGVKLINLDEGEQLVSLERVAEEPED--TAAEDESDADTGALEN 917
Query: 772 TKHNRGTK 779
N+G +
Sbjct: 918 EAENKGAE 925
>gi|398844132|ref|ZP_10601232.1| DNA gyrase, A subunit [Pseudomonas sp. GM84]
gi|398254873|gb|EJN39930.1| DNA gyrase, A subunit [Pseudomonas sp. GM84]
Length = 920
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/889 (49%), Positives = 634/889 (71%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTIDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I++ ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++AL++G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALIDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L++ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADSCRPEDLPEQFGLRDGKYY-LSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG + RR+EI+ + + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DARRTEILNASHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL--------SNNKRDF-- 649
+ G++YW K ++IP+ SR +RG+P++N+ L+ E+IT +L + ++ +
Sbjct: 596 SKGKVYWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQSADPDEELED 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 GDEGVIEGEVVEVEEVDEEDGDTLEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRTARGVRGMRLGKGQR 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V
Sbjct: 776 IISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + N L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLANDETLVGLERI 883
>gi|161870257|ref|YP_001599427.1| DNA gyrase subunit A [Neisseria meningitidis 053442]
gi|161595810|gb|ABX73470.1| DNA gyrase subunit A [Neisseria meningitidis 053442]
Length = 916
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 628/896 (70%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD+++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDIAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDAIIKLIKESPNAAEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGLVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|192382550|gb|ACF04296.1| GyrA [Neisseria meningitidis]
Length = 916
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|192360085|ref|YP_001982590.1| DNA gyrase subunit A [Cellvibrio japonicus Ueda107]
gi|190686250|gb|ACE83928.1| DNA gyrase, A subunit [Cellvibrio japonicus Ueda107]
Length = 883
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/851 (51%), Positives = 625/851 (73%), Gaps = 14/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MSDLAKEILPVSIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+++L+ DLDKET+DF+ NYDG E+ P+VLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHDLMADLDKETVDFVPNYDGTEQIPAVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+ G L ++ NP+ +I++L++ IP PDFPT II G + + + Y TG+GRV
Sbjct: 181 NIPPHNLGEVVRGCLAMVDNPDITIDELMEYIPGPDFPTGAIINGRAGIVEAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RAK IE + R II+ E+PYQ+NK L+E+I++LVKEKK+E IS LRDESDK G
Sbjct: 241 VMRAKAEIETDAKTGRETIIVTEIPYQINKARLIERIAELVKEKKVEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+K+ E +++LN L+ QTQLQ TFG+NM+AL +GQPKLLNLK++L FI HR+E
Sbjct: 301 MRIVIEVKKTESGDVLLNNLFAQTQLQTTFGVNMVALDDGQPKLLNLKDMLEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE HILEGL +A+ NID I++I+ + +P EAK + W
Sbjct: 361 VVTRRTVYLLRKARERGHILEGLAVAIANIDEVIELIKRSPSPAEAKESLQARGWA---A 417
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ F ++ + + ++ + Y LS QAQ IL + L RLT ME K++ +
Sbjct: 418 DSVLPFLERAGDNACRPEDLEGNYGVIDGRYYLSAAQAQAILDLRLHRLTGMEHDKLLAE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y++ IK++ + +IL N+ R++E+I EL + +G + RR+EII ++++ +TEDL
Sbjct: 478 YDDKIKEIAEYLEILGNAIRLMEVIRAELEQVIADFG----DARRTEIIASSLDLTTEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D V+T+S+ GY KSQP+++Y+AQ+RGG GK A KDED++ L IA+THD ILCF
Sbjct: 534 IAVEDRVVTISHGGYAKSQPLADYQAQRRGGMGKSATAVKDEDFVEHLLIASTHDTILCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
++ G++Y LKV+ IP+ R SRG+P++N+ L+ E+IT ILP+ + + ++++FM+
Sbjct: 594 TSVGKVYSLKVYMIPEAGRQSRGRPVVNLLPLEEGERITSILPV----KSYDNDHFIFMA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT+L+ F + R +G A+ L D L+G A+T+G+ D++LFS SGKA RF E+
Sbjct: 650 TRKGTVKKTVLTEFQSLRANGKRAIELDEGDTLVGTAVTNGACDVILFSSSGKAARFRES 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VRAMGRS+RGV G+R+ + Q ++ +++ Q VLT +ENGYGKRT + E+ RG+
Sbjct: 710 QVRAMGRSSRGVRGIRIAEGQFIVGMVIPLAGGQ-VLTVSENGYGKRTPVDEFPAKGRGS 768
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I ++T RNG++V A V EIMLI+ G ++RTRV E+ + R+TQGV LI ++
Sbjct: 769 QGVIGMQTTDRNGELVGAVQVFDGEEIMLISDQGTMVRTRVDEVSLLSRNTQGVRLIKLK 828
Query: 839 NKSKLCGVQRL 849
+ ++ G++R+
Sbjct: 829 DGERMQGIERI 839
>gi|28199802|ref|NP_780116.1| DNA gyrase subunit A [Xylella fastidiosa Temecula1]
gi|182682554|ref|YP_001830714.1| DNA gyrase subunit A [Xylella fastidiosa M23]
gi|417559040|ref|ZP_12209994.1| DNA gyrase (topoisomerase II) A subunit [Xylella fastidiosa EB92.1]
gi|28057923|gb|AAO29765.1| DNA gyrase subunit A [Xylella fastidiosa Temecula1]
gi|182632664|gb|ACB93440.1| DNA gyrase, A subunit [Xylella fastidiosa M23]
gi|338178308|gb|EGO81299.1| DNA gyrase (topoisomerase II) A subunit [Xylella fastidiosa EB92.1]
Length = 893
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/883 (51%), Positives = 632/883 (71%), Gaps = 44/883 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDG+KPVHRRVL+AMHE+ +
Sbjct: 1 MAETAKEIIKVNLEDEMRKSYLDYAMSVIVGRALPDARDGMKPVHRRVLYAMHELGAHSD 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR++GE +GKYHPHGD S+YD LVRMAQ FSLR LV+GQGNFGS+DGD AAAM
Sbjct: 61 KSYFKSARIIGEVLGKYHPHGDQSVYDTLVRMAQPFSLRYLLVEGQGNFGSVDGDPAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++IS++L+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTESRMSRISHDLIADIDKETVDFQPNYDEKETEPTVMPTRFPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E I+ + ++ NPE I+ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLVESINACIALIDNPELDIDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + R AI++ E+PYQVNK L+EKI++LVKEK+++ IS LRDESDK G
Sbjct: 241 RMRAKADIEVAD-NGREAIVVTEIPYQVNKARLIEKIAELVKEKRIDGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+LLNLK+IL FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLLNLKQILQAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I +I+++ +PQEAK +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIHLIKTSPSPQEAKERLLAKTWAPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + + L D Y+L+++Q ++IL+M L RLT +EQ K+ +Y+
Sbjct: 420 GTLLSASGGEASRPEDLPQGVGLI-GDSYQLTEVQVRQILEMRLHRLTGLEQDKLAEEYQ 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ ++ L IL + ++++I DEL I+ +YG ++RR+EI + + DLIA
Sbjct: 479 QLLEIIVGLIRILESPDVLLQVIRDELLKIREEYG----DVRRTEIRHSEEDLDILDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY K QP+S YRAQKRGGRG+ A+ TK+ED+I+ L++ NTHD +L F++
Sbjct: 535 PEDVVVTLSHAGYAKRQPVSAYRAQKRGGRGRAAVTTKEEDFIDHLWLVNTHDTLLTFTS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++WL V+Q+P+ N+RG+PIIN L+ EK+ +LP+ R++ +N+YVF +T
Sbjct: 595 TGKVFWLSVYQLPEAGSNARGRPIINWIPLEPGEKVQAVLPV----REYAENHYVFFATR 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT LS F+ G IA+NL D LIG ALTDG D++LF+ +GK VRF+EN+V
Sbjct: 651 QGTVKKTPLSEFAFRLARGKIAINLDQGDALIGVALTDGERDVLLFASNGKTVRFSENTV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSN----------------------NQKQSV---- 754
R+MGR+A GV G++L + ++V++L+++ N +SV
Sbjct: 711 RSMGRTATGVRGIKLTEGEEVVSLIIAEPATGVDMLEEAEETADDDIQTANTAESVHIDP 770
Query: 755 --------LTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
LTATENGYGK T + Y + RGT+G+I I+T +RNG++VAA L+ E++
Sbjct: 771 TQDDILCILTATENGYGKCTPLAHYPRKGRGTQGVIGIQTTERNGRLVAAVLLGATDEVL 830
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
LI+ GG L+RTR SEI ++GR+TQGV LI + N KL V+RL
Sbjct: 831 LISDGGTLVRTRGSEISRVGRNTQGVTLIRLSNGEKLQAVERL 873
>gi|389605484|emb|CCA44401.1| DNA gyrase subunit A [Neisseria meningitidis alpha522]
Length = 916
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGLVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|71279745|ref|YP_269051.1| DNA gyrase, A subunit [Colwellia psychrerythraea 34H]
gi|71145485|gb|AAZ25958.1| DNA gyrase, A subunit [Colwellia psychrerythraea 34H]
Length = 908
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/869 (51%), Positives = 632/869 (72%), Gaps = 30/869 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AK+++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLAKQIVPVNIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMDVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ +L DLDKET+DF+ NYDG E P+V+PTR+PNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHSILADLDKETVDFVPNYDGTEHIPAVMPTRVPNLLVNGTSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+ L ++ N E + ++++ IP PDFPTAGII G + + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINACLALIDNSELTFEEILEHIPGPDFPTAGIISGRAGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ I+ + II+ ELPYQVNK L+EK+++LVK+K+LE IS LRDESDK G
Sbjct: 241 KIRARASIDVHETTGKETIIVHELPYQVNKARLIEKMAELVKDKRLEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIE+KR E+ E+VLN LYK TQ+Q +FG+NM+AL NGQPK+ N+KE+L F+LHR+E
Sbjct: 301 MRMVIEIKRGEVGEVVLNNLYKLTQMQVSFGLNMVALTNGQPKIFNIKEMLEAFVLHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILEGL+IAL NID I++I++++ +E++ K+I W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEGLSIALANIDPIIEMIKNSNNRKESEEKLISQGWELGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L+ QA+ I+ + L +L+ ME KI+++Y+
Sbjct: 421 ANMLSEAGNDAARPEWLEPEYGIRDG-LYYLTAEQAKAIVDLQLYKLSGMEHDKILSEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL+ R++E+I +EL I++++G RR+EI + + S EDLI
Sbjct: 480 ALLDLIAELMHILATPARLMEVICEELVAIRDEFGDE----RRTEITNASHDLSLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 536 EEDVVVTLSHEGYVKYQVLSDYEAQRRGGKGKAATKMKEEDFIERLLVANTHDTILCFSD 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+LYWLKV+Q+P SR +RG+PI+N+ L++ E+IT ILP+ RD+ + Y+ M+T+
Sbjct: 596 RGKLYWLKVFQLPLASRTARGRPIVNILPLESDERITAILPV----RDYADDKYIVMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT L +SN R +GIIA+NL ++D LIG +TDG+ D+MLFSD+GK VRFNE
Sbjct: 652 SGTVKKTRLDAYSNQRANGIIALNLRDDDTLIGVDITDGTNDVMLFSDAGKVVRFNEKVR 711
Query: 719 ------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATEN 760
+++ +GR+ GV G++LE +QKV++L++ N +LT TEN
Sbjct: 712 DSETGEIKLDPETGEQRWALKPIGRTGTGVRGIKLEGEQKVVSLIIPKNDG-PILTITEN 770
Query: 761 GYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVS 820
G+GKRT + EY +R TKG++SIK ++RNGKVV A V EIMLIT G L+RTRV+
Sbjct: 771 GFGKRTDLAEYPAKSRATKGVVSIKVSERNGKVVGAVQVEDLDEIMLITDSGTLVRTRVN 830
Query: 821 EIRKMGRSTQGVILITVENKSKLCGVQRL 849
E+ +GR+TQGV LI + + +QR+
Sbjct: 831 EVSVIGRNTQGVRLIRTADDEHVVALQRI 859
>gi|255068314|ref|ZP_05320169.1| DNA gyrase, A subunit [Neisseria sicca ATCC 29256]
gi|255047433|gb|EET42897.1| DNA gyrase, A subunit [Neisseria sicca ATCC 29256]
Length = 924
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/894 (52%), Positives = 627/894 (70%), Gaps = 52/894 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L PE I++LI I+ APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPETEIDELINILQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILAEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLLSRAWRSGLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + L + Y LS+IQA IL+M L+ LT ++Q++I+ Y
Sbjct: 430 EDMLSRTDLDLRMARPEGLPANLGLQEQGYYLSEIQADAILRMSLRNLTGLDQEEIVGDY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DIL+ +RI +II +EL K +G RRSEI + + EDLI
Sbjct: 490 KNIMAKIIDYLDILAKPERITQIIREELEETKTNFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
+ G+VKK LS F N R GI A+ L D L+GAA T GS DIMLFS+ GKA+RFNE
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAIALKEGDHLVGAAQTSGSDDIMLFSNLGKAIRFNEYW 721
Query: 718 ------------------------------------NSVRAMGRSARGVIGMRLEKKQKV 741
+ VR GR + G+ GMRL K+
Sbjct: 722 EKSGNDEAEDADIETEISDDLEDETADNENALPSGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAAQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LV ++MLIT+GG LIRT+V EIR+ GR+ GV LI ++ L ++R+ +
Sbjct: 842 LVGETDDLMLITSGGKLIRTKVEEIRETGRAAAGVRLINLDEGETLVSLERVAE 895
>gi|268686814|ref|ZP_06153676.1| DNA gyrase subunit A [Neisseria gonorrhoeae SK-93-1035]
gi|268627098|gb|EEZ59498.1| DNA gyrase subunit A [Neisseria gonorrhoeae SK-93-1035]
Length = 916
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/896 (52%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + I LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPISLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L P+ I++LI II APDFPT IYGL V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPKTEIDELIDIIQAPDFPTGATIYGLGGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IR KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 IRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++QK+II
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKKQG--YYLSEIQADAILRMSLRNLTGLDQKEIIE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
N VR GR + G+ GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDDLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|192382542|gb|ACF04292.1| GyrA [Neisseria meningitidis]
gi|192382544|gb|ACF04293.1| GyrA [Neisseria meningitidis]
Length = 916
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|121635089|ref|YP_975334.1| DNA gyrase subunit A [Neisseria meningitidis FAM18]
gi|385340285|ref|YP_005894157.1| DNA gyrase subunit A [Neisseria meningitidis G2136]
gi|416177852|ref|ZP_11610221.1| DNA gyrase, A subunit [Neisseria meningitidis M6190]
gi|416191834|ref|ZP_11616262.1| DNA gyrase, A subunit [Neisseria meningitidis ES14902]
gi|416203575|ref|ZP_11620097.1| DNA gyrase, A subunit [Neisseria meningitidis 961-5945]
gi|418288558|ref|ZP_12901033.1| DNA gyrase, A subunit [Neisseria meningitidis NM233]
gi|421538333|ref|ZP_15984510.1| DNA gyrase, A subunit [Neisseria meningitidis 93003]
gi|421554986|ref|ZP_16000925.1| DNA gyrase, A subunit [Neisseria meningitidis 98008]
gi|433467529|ref|ZP_20424983.1| DNA gyrase, A subunit [Neisseria meningitidis 87255]
gi|433469580|ref|ZP_20427001.1| DNA gyrase, A subunit [Neisseria meningitidis 98080]
gi|433492778|ref|ZP_20449871.1| DNA gyrase, A subunit [Neisseria meningitidis NM586]
gi|433494912|ref|ZP_20451980.1| DNA gyrase, A subunit [Neisseria meningitidis NM762]
gi|433497079|ref|ZP_20454117.1| DNA gyrase, A subunit [Neisseria meningitidis M7089]
gi|433499141|ref|ZP_20456150.1| DNA gyrase, A subunit [Neisseria meningitidis M7124]
gi|433501117|ref|ZP_20458103.1| DNA gyrase, A subunit [Neisseria meningitidis NM174]
gi|433503102|ref|ZP_20460063.1| DNA gyrase, A subunit [Neisseria meningitidis NM126]
gi|120866795|emb|CAM10548.1| DNA gyrase subunit A [Neisseria meningitidis FAM18]
gi|325132422|gb|EGC55115.1| DNA gyrase, A subunit [Neisseria meningitidis M6190]
gi|325138411|gb|EGC60979.1| DNA gyrase, A subunit [Neisseria meningitidis ES14902]
gi|325142582|gb|EGC64977.1| DNA gyrase, A subunit [Neisseria meningitidis 961-5945]
gi|325198529|gb|ADY93985.1| DNA gyrase, A subunit [Neisseria meningitidis G2136]
gi|372201690|gb|EHP15583.1| DNA gyrase, A subunit [Neisseria meningitidis NM233]
gi|402317152|gb|EJU52691.1| DNA gyrase, A subunit [Neisseria meningitidis 93003]
gi|402332139|gb|EJU67470.1| DNA gyrase, A subunit [Neisseria meningitidis 98008]
gi|432202363|gb|ELK58427.1| DNA gyrase, A subunit [Neisseria meningitidis 87255]
gi|432203850|gb|ELK59900.1| DNA gyrase, A subunit [Neisseria meningitidis 98080]
gi|432228564|gb|ELK84264.1| DNA gyrase, A subunit [Neisseria meningitidis NM586]
gi|432230115|gb|ELK85794.1| DNA gyrase, A subunit [Neisseria meningitidis NM762]
gi|432233572|gb|ELK89199.1| DNA gyrase, A subunit [Neisseria meningitidis M7089]
gi|432234975|gb|ELK90595.1| DNA gyrase, A subunit [Neisseria meningitidis M7124]
gi|432236408|gb|ELK92017.1| DNA gyrase, A subunit [Neisseria meningitidis NM174]
gi|432239867|gb|ELK95411.1| DNA gyrase, A subunit [Neisseria meningitidis NM126]
Length = 916
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|15677247|ref|NP_274400.1| DNA gyrase subunit A [Neisseria meningitidis MC58]
gi|254805179|ref|YP_003083400.1| DNA gyrase subunit A [Neisseria meningitidis alpha14]
gi|385328650|ref|YP_005882953.1| DNA gyrase subunit A [Neisseria meningitidis alpha710]
gi|385851026|ref|YP_005897541.1| DNA gyrase subunit A [Neisseria meningitidis M04-240196]
gi|385852992|ref|YP_005899506.1| DNA gyrase subunit A [Neisseria meningitidis H44/76]
gi|416161261|ref|ZP_11606320.1| DNA gyrase, A subunit [Neisseria meningitidis N1568]
gi|416170174|ref|ZP_11608291.1| DNA gyrase, A subunit [Neisseria meningitidis OX99.30304]
gi|416182729|ref|ZP_11612165.1| DNA gyrase, A subunit [Neisseria meningitidis M13399]
gi|416196303|ref|ZP_11618073.1| DNA gyrase, A subunit [Neisseria meningitidis CU385]
gi|418290803|ref|ZP_12902915.1| DNA gyrase, A subunit [Neisseria meningitidis NM220]
gi|421542686|ref|ZP_15988793.1| DNA gyrase, A subunit [Neisseria meningitidis NM255]
gi|421544679|ref|ZP_15990755.1| DNA gyrase, A subunit [Neisseria meningitidis NM140]
gi|421546794|ref|ZP_15992839.1| DNA gyrase, A subunit [Neisseria meningitidis NM183]
gi|421549047|ref|ZP_15995071.1| DNA gyrase, A subunit [Neisseria meningitidis NM2781]
gi|421550880|ref|ZP_15996881.1| DNA gyrase, A subunit [Neisseria meningitidis 69166]
gi|421552997|ref|ZP_15998969.1| DNA gyrase, A subunit [Neisseria meningitidis NM576]
gi|421559364|ref|ZP_16005238.1| DNA gyrase, A subunit [Neisseria meningitidis 92045]
gi|427828077|ref|ZP_18995096.1| DNA gyrase, A subunit [Neisseria meningitidis H44/76]
gi|433465329|ref|ZP_20422811.1| DNA gyrase, A subunit [Neisseria meningitidis NM422]
gi|433471498|ref|ZP_20428884.1| DNA gyrase, A subunit [Neisseria meningitidis 68094]
gi|433473778|ref|ZP_20431139.1| DNA gyrase, A subunit [Neisseria meningitidis 97021]
gi|433477831|ref|ZP_20435151.1| DNA gyrase, A subunit [Neisseria meningitidis 70012]
gi|433482341|ref|ZP_20439600.1| DNA gyrase, A subunit [Neisseria meningitidis 2006087]
gi|433484324|ref|ZP_20441549.1| DNA gyrase, A subunit [Neisseria meningitidis 2002038]
gi|433486593|ref|ZP_20443788.1| DNA gyrase, A subunit [Neisseria meningitidis 97014]
gi|433488667|ref|ZP_20445829.1| DNA gyrase, A subunit [Neisseria meningitidis M13255]
gi|433490709|ref|ZP_20447835.1| DNA gyrase, A subunit [Neisseria meningitidis NM418]
gi|433505064|ref|ZP_20462003.1| DNA gyrase, A subunit [Neisseria meningitidis 9506]
gi|433507392|ref|ZP_20464300.1| DNA gyrase, A subunit [Neisseria meningitidis 9757]
gi|433509490|ref|ZP_20466359.1| DNA gyrase, A subunit [Neisseria meningitidis 12888]
gi|433511598|ref|ZP_20468425.1| DNA gyrase, A subunit [Neisseria meningitidis 4119]
gi|433522101|ref|ZP_20478791.1| DNA gyrase, A subunit [Neisseria meningitidis 61103]
gi|433526331|ref|ZP_20482961.1| DNA gyrase, A subunit [Neisseria meningitidis 69096]
gi|433539165|ref|ZP_20495641.1| DNA gyrase, A subunit [Neisseria meningitidis 70030]
gi|7226624|gb|AAF41750.1| DNA gyrase subunit A [Neisseria meningitidis MC58]
gi|254668721|emb|CBA06523.1| DNA gyrase subunit A [Neisseria meningitidis alpha14]
gi|308389502|gb|ADO31822.1| DNA gyrase subunit A [Neisseria meningitidis alpha710]
gi|316984203|gb|EFV63181.1| DNA gyrase, A subunit [Neisseria meningitidis H44/76]
gi|325128426|gb|EGC51307.1| DNA gyrase, A subunit [Neisseria meningitidis N1568]
gi|325130461|gb|EGC53221.1| DNA gyrase, A subunit [Neisseria meningitidis OX99.30304]
gi|325134379|gb|EGC57024.1| DNA gyrase, A subunit [Neisseria meningitidis M13399]
gi|325140397|gb|EGC62918.1| DNA gyrase, A subunit [Neisseria meningitidis CU385]
gi|325199996|gb|ADY95451.1| DNA gyrase, A subunit [Neisseria meningitidis H44/76]
gi|325205849|gb|ADZ01302.1| DNA gyrase, A subunit [Neisseria meningitidis M04-240196]
gi|372200972|gb|EHP14957.1| DNA gyrase, A subunit [Neisseria meningitidis NM220]
gi|402317516|gb|EJU53054.1| DNA gyrase, A subunit [Neisseria meningitidis NM255]
gi|402323039|gb|EJU58489.1| DNA gyrase, A subunit [Neisseria meningitidis NM183]
gi|402323870|gb|EJU59312.1| DNA gyrase, A subunit [Neisseria meningitidis NM140]
gi|402325726|gb|EJU61135.1| DNA gyrase, A subunit [Neisseria meningitidis NM2781]
gi|402329417|gb|EJU64778.1| DNA gyrase, A subunit [Neisseria meningitidis 69166]
gi|402330176|gb|EJU65525.1| DNA gyrase, A subunit [Neisseria meningitidis NM576]
gi|402335863|gb|EJU71126.1| DNA gyrase, A subunit [Neisseria meningitidis 92045]
gi|432203273|gb|ELK59327.1| DNA gyrase, A subunit [Neisseria meningitidis NM422]
gi|432208350|gb|ELK64328.1| DNA gyrase, A subunit [Neisseria meningitidis 68094]
gi|432210076|gb|ELK66042.1| DNA gyrase, A subunit [Neisseria meningitidis 97021]
gi|432215496|gb|ELK71385.1| DNA gyrase, A subunit [Neisseria meningitidis 70012]
gi|432215591|gb|ELK71478.1| DNA gyrase, A subunit [Neisseria meningitidis 2006087]
gi|432220422|gb|ELK76243.1| DNA gyrase, A subunit [Neisseria meningitidis 2002038]
gi|432221878|gb|ELK77682.1| DNA gyrase, A subunit [Neisseria meningitidis 97014]
gi|432223500|gb|ELK79281.1| DNA gyrase, A subunit [Neisseria meningitidis M13255]
gi|432227700|gb|ELK83409.1| DNA gyrase, A subunit [Neisseria meningitidis NM418]
gi|432241189|gb|ELK96719.1| DNA gyrase, A subunit [Neisseria meningitidis 9506]
gi|432241757|gb|ELK97286.1| DNA gyrase, A subunit [Neisseria meningitidis 9757]
gi|432246878|gb|ELL02324.1| DNA gyrase, A subunit [Neisseria meningitidis 12888]
gi|432247646|gb|ELL03083.1| DNA gyrase, A subunit [Neisseria meningitidis 4119]
gi|432259172|gb|ELL14446.1| DNA gyrase, A subunit [Neisseria meningitidis 61103]
gi|432261095|gb|ELL16352.1| DNA gyrase, A subunit [Neisseria meningitidis 69096]
gi|432273527|gb|ELL28625.1| DNA gyrase, A subunit [Neisseria meningitidis 70030]
Length = 916
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|421503647|ref|ZP_15950593.1| DNA gyrase subunit A [Pseudomonas mendocina DLHK]
gi|400345474|gb|EJO93838.1| DNA gyrase subunit A [Pseudomonas mendocina DLHK]
Length = 917
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/897 (48%), Positives = 635/897 (70%), Gaps = 48/897 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDKET+D++ NYDG E+ P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L ++ N + +++DL++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLSEVIDGCLALIDNADLTVDDLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +E+ ++ R +++ ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARVEVEDIDKVGGRQQLVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+P++VLN LY QTQ+Q+ FG+N++ALV+GQPK +NLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPDVVLNNLYAQTQMQSVFGINVVALVDGQPKTMNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+++ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKASPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VEAMVERAGADSCRPEGLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL++ +R++E+I +EL +K ++G + RR+EII + + + DLI
Sbjct: 480 QEILSLIGELIRILTSPERLMEVIREELEKVKAEFG----DARRTEIIASRQDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y AQ+RGG+GK A KDED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYEAQRRGGKGKSATGVKDEDYVEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL--------SNNKRDF-- 649
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + + D
Sbjct: 596 SKGKVYWLRTFEIPEASRAARGRPLVNLLPLDEGERITAMLQIDLEALQQSAGADEDLDD 655
Query: 650 -------------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKS 678
P ++FM+T+ G VKKT L FS PR +
Sbjct: 656 EGLVIEGEATEVVEAEEVEEVEGETPELVAEPTGAFIFMATAFGTVKKTPLVQFSRPRSA 715
Query: 679 GIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKK 738
G+IA+ L D LI AA+TDG+ ++MLFSD+GK +RF E+ VR MGR+ARGV GMRL K
Sbjct: 716 GLIALKLEEGDTLIAAAITDGAKEVMLFSDAGKVLRFAESKVRTMGRTARGVRGMRLGKD 775
Query: 739 QKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATL 798
Q++I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T++RNGK+V A
Sbjct: 776 QRLISMLIPESGAQ-ILTASERGFGKRTGLGKFPRRGRGGQGVIAMVTSERNGKLVGAIQ 834
Query: 799 VNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMI 855
V EIMLI+ G L+RTRV E+ GR+TQGV LI + L G++R+ + T +
Sbjct: 835 VQDGEEIMLISDQGTLVRTRVDEVSSSGRNTQGVTLIKLAKDETLVGLERVQEPTPV 891
>gi|296313969|ref|ZP_06863910.1| DNA gyrase, A subunit [Neisseria polysaccharea ATCC 43768]
gi|296839398|gb|EFH23336.1| DNA gyrase, A subunit [Neisseria polysaccharea ATCC 43768]
Length = 918
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/894 (51%), Positives = 625/894 (69%), Gaps = 52/894 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L PE I++LI I+ APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPETEIDELINILQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILAEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIRLIKESADAPEAKEKLLSRAWRSGLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + L + Y LS+IQA IL+M L+ LT ++Q++I+ Y
Sbjct: 430 EDMLSRTDLDLRMARPEGLPANLGLQEQGYYLSEIQADAILRMSLRNLTGLDQEEIVGDY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DIL+ +RI +II +EL K +G RRSEI + + EDLI
Sbjct: 490 KNIMAKIIDYLDILAKPERITQIIREELEETKTNFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKIQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 662 AQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYW 721
Query: 718 --------------------------NSVRAMGRSARGV----------IGMRLEKKQKV 741
+S A+ GV GMRL K+
Sbjct: 722 EKSGNDEAEDADIETEVSDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 842 LVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|399911184|ref|ZP_10779498.1| DNA gyrase subunit A [Halomonas sp. KM-1]
Length = 912
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/874 (50%), Positives = 629/874 (71%), Gaps = 33/874 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ + +E+E+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAMHE+ N WN
Sbjct: 1 MGDIAREILPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMHELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRHVLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDK+T+D++ NYDG E+ P VLPT++PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLDKDTVDWVDNYDGTERIPEVLPTKVPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EVIDG L ++ + +++DL++ I PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNMGEVIDGCLALIDDYTLTVDDLMEYISGPDFPTAGIINGRAGILEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R II+ ELPYQVNK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 YVRARHTIEYHEKSGRDHIIVTELPYQVNKARLIEKIAELVKDKKIEGIAELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE+KR E E+V+N L+ QTQLQN FG+NM+A+ +GQPK+LNLKEIL FI HR+E
Sbjct: 301 LRVVIEVKRGESGEVVVNNLFAQTQLQNVFGINMVAIEDGQPKILNLKEILEAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++EL+KARE HILEGL +A++NID I++I+++ + EAK K+++ W V
Sbjct: 361 VVTRRTLYELKKARERGHILEGLAVAISNIDEVIELIKASPSAAEAKEKLLDKVWPPGQV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM-YKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
+ ++ ++ L Y+LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 TAMLERAGATSCKPEELEEGFGLNTTGTEYRLSPAQAQAILELRLHRLTGLETEKLLDEY 480
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+++K+ +L IL++S+R++E+I +EL +++++ + RR+EI + ++ S EDLI
Sbjct: 481 LGILEKIAELMAILASSERLLEVIREELMAVRDQFA----DPRRTEIQASHLDLSIEDLI 536
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +DMV+T+S GY K+QP+S+Y+AQ+RGGRGK A KDED I L +A+THD +L FS
Sbjct: 537 AEEDMVVTVSRTGYAKTQPLSDYQAQRRGGRGKSATAMKDEDVIEHLLVASTHDTVLLFS 596
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G++YWLKV+++P SR SRGKP++N+ L E I ILP+ +D+ + Y+F +T
Sbjct: 597 NKGKVYWLKVYEMPAASRGSRGKPLVNLLPLDEGEAINAILPV----KDYSPDCYIFFAT 652
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VK+T L FS PR G+IA+++ D L+GAA+T G+ +M+ S +GKA+RF E++
Sbjct: 653 AKGTVKRTSLDQFSRPRSVGLIAIDIEEGDRLVGAAITSGNDHVMMLSSNGKAIRFEESN 712
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS------------------------VL 755
VRAMGR+ARGV GM+L +VI+L++ +Q+ +L
Sbjct: 713 VRAMGRTARGVRGMKLLGDAEVISLIIPKSQQIDADADSEVEGEEGAPLENGNGGQIYIL 772
Query: 756 TATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILI 815
TA+ENGYGKRT ++E+ RG +G+I+++T++RNG +VAA V E+MLIT G L+
Sbjct: 773 TASENGYGKRTRLEEFPLRGRGGQGVIAMQTSERNGSLVAAMQVYSADEMMLITDRGTLV 832
Query: 816 RTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
RTRV E+ R+TQGV+LI + N KL R+
Sbjct: 833 RTRVDEVSITSRNTQGVMLIRLGNDEKLVKTVRI 866
Score = 45.1 bits (105), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 22/194 (11%)
Query: 588 IANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNN-- 645
I + +D+++ S+ G+ + + R +RG + M L + E I++I+P S
Sbjct: 689 ITSGNDHVMMLSSNGKAIRFEESNVRAMGRTARG--VRGMKLLGDAEVISLIIPKSQQID 746
Query: 646 ---------KRDFPKNN------YVFMSTSLGIVKKTLLSNFS--NPRKSGIIAVNLSNE 688
+ P N Y+ ++ G K+T L F G+IA+ S
Sbjct: 747 ADADSEVEGEEGAPLENGNGGQIYILTASENGYGKRTRLEEFPLRGRGGQGVIAMQTSER 806
Query: 689 DFLIGAALTDGSYD-IMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVS 747
+ + AA+ S D +ML +D G VR + V R+ +GV+ +RL +K++ +
Sbjct: 807 NGSLVAAMQVYSADEMMLITDRGTLVRTRVDEVSITSRNTQGVMLIRLGNDEKLVKTVRI 866
Query: 748 NNQKQSVLTATENG 761
+ + V E+G
Sbjct: 867 DEPENEVEGEPEDG 880
>gi|59801057|ref|YP_207769.1| DNA gyrase subunit A [Neisseria gonorrhoeae FA 1090]
gi|268596652|ref|ZP_06130819.1| DNA gyrase subunit A [Neisseria gonorrhoeae FA19]
gi|268603883|ref|ZP_06138050.1| DNA gyrase subunit A [Neisseria gonorrhoeae PID1]
gi|268682346|ref|ZP_06149208.1| DNA gyrase subunit A [Neisseria gonorrhoeae PID332]
gi|293398920|ref|ZP_06643085.1| DNA gyrase, A subunit [Neisseria gonorrhoeae F62]
gi|59717952|gb|AAW89357.1| DNA gyrase subunit A [Neisseria gonorrhoeae FA 1090]
gi|268550440|gb|EEZ45459.1| DNA gyrase subunit A [Neisseria gonorrhoeae FA19]
gi|268588014|gb|EEZ52690.1| DNA gyrase subunit A [Neisseria gonorrhoeae PID1]
gi|268622630|gb|EEZ55030.1| DNA gyrase subunit A [Neisseria gonorrhoeae PID332]
gi|291610334|gb|EFF39444.1| DNA gyrase, A subunit [Neisseria gonorrhoeae F62]
Length = 916
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/896 (52%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L P+ I++LI II APDFPT IYGL V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPKTEIDELIDIIQAPDFPTGATIYGLGGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IR KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 IRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++QK+II
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKKQG--YYLSEIQADAILRMSLRNLTGLDQKEIIE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
N VR GR + G+ GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDDLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|304387287|ref|ZP_07369480.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Neisseria
meningitidis ATCC 13091]
gi|304338670|gb|EFM04787.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Neisseria
meningitidis ATCC 13091]
Length = 916
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESPNAAEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|146306879|ref|YP_001187344.1| DNA gyrase subunit A [Pseudomonas mendocina ymp]
gi|145575080|gb|ABP84612.1| DNA gyrase subunit A [Pseudomonas mendocina ymp]
Length = 922
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/897 (48%), Positives = 634/897 (70%), Gaps = 48/897 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DLDKET+D++ NYDG E+ P+V+PT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L ++ N + +++DL++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLSEVIDGCLALIDNADLTVDDLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +E+ ++ R +++ ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YIRARVEVEDIDKVGGRQQLVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+P++VLN LY QTQ+Q+ FG+N++ALV+GQPK +NLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPDVVLNNLYAQTQMQSVFGINVVALVDGQPKTMNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+++ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKASPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VEAMVERAGADSCRPEGLDPQYGLREGKYY-LSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL++ +R++E+I +EL +K ++G + RR+EII + + + DLI
Sbjct: 480 QEILSLIGELIRILTSPERLMEVIREELEKVKAEFG----DARRTEIIASRQDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY KSQP++ Y AQ+RGG+GK A KDED++ L +AN+H +L FS
Sbjct: 536 TEEERVVTISHGGYAKSQPLAAYEAQRRGGKGKSATGVKDEDYVEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL--------SNNKRDF-- 649
+ G++YWL+ ++IP+ SR +RG+P++N+ L E+IT +L + + D
Sbjct: 596 SKGKVYWLRTFEIPEASRAARGRPLVNLLPLDEGERITAMLQIDLEALQQSAGADEDLDD 655
Query: 650 -------------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKS 678
P ++FM+T+ G VKKT L FS PR +
Sbjct: 656 EGLVIEGEATEVVEAEEVEEVEGETPELVAEPTGAFIFMATAFGTVKKTPLVQFSRPRSA 715
Query: 679 GIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKK 738
G+IA+ L D LI AA+TDG+ ++MLFSD+GK +RF E+ VR MGR+ARGV GMRL K
Sbjct: 716 GLIALKLEEGDTLIAAAITDGAKEVMLFSDAGKVLRFAESKVRTMGRTARGVRGMRLGKD 775
Query: 739 QKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATL 798
Q++I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T++RNGK+V A
Sbjct: 776 QRLISMLIPESGAQ-ILTASERGFGKRTGLGKFPRRGRGGQGVIAMVTSERNGKLVGAIQ 834
Query: 799 VNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMI 855
V EIMLI+ G L+RTRV E+ GR+TQGV LI + L G++R+ + T +
Sbjct: 835 VQDGEEIMLISDQGTLVRTRVDEVSSSGRNTQGVTLIKLAKDETLVGLERVQEPTPV 891
>gi|417824323|ref|ZP_12470914.1| DNA gyrase, A subunit [Vibrio cholerae HE48]
gi|419836111|ref|ZP_14359554.1| DNA gyrase, A subunit [Vibrio cholerae HC-46B1]
gi|421342653|ref|ZP_15793058.1| DNA gyrase, A subunit [Vibrio cholerae HC-43B1]
gi|421354025|ref|ZP_15804357.1| DNA gyrase, A subunit [Vibrio cholerae HE-45]
gi|423734658|ref|ZP_17707870.1| DNA gyrase, A subunit [Vibrio cholerae HC-41B1]
gi|424008941|ref|ZP_17751888.1| DNA gyrase, A subunit [Vibrio cholerae HC-44C1]
gi|424660312|ref|ZP_18097559.1| DNA gyrase, A subunit [Vibrio cholerae HE-16]
gi|340048008|gb|EGR08931.1| DNA gyrase, A subunit [Vibrio cholerae HE48]
gi|395943170|gb|EJH53845.1| DNA gyrase, A subunit [Vibrio cholerae HC-43B1]
gi|395953150|gb|EJH63763.1| DNA gyrase, A subunit [Vibrio cholerae HE-45]
gi|408050795|gb|EKG85934.1| DNA gyrase, A subunit [Vibrio cholerae HE-16]
gi|408630959|gb|EKL03531.1| DNA gyrase, A subunit [Vibrio cholerae HC-41B1]
gi|408857976|gb|EKL97655.1| DNA gyrase, A subunit [Vibrio cholerae HC-46B1]
gi|408865092|gb|EKM04504.1| DNA gyrase, A subunit [Vibrio cholerae HC-44C1]
Length = 894
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 622/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|416213068|ref|ZP_11622114.1| DNA gyrase, A subunit [Neisseria meningitidis M01-240013]
gi|325144681|gb|EGC66979.1| DNA gyrase, A subunit [Neisseria meningitidis M01-240013]
Length = 916
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPNGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|262402399|ref|ZP_06078960.1| DNA gyrase subunit A [Vibrio sp. RC586]
gi|262351181|gb|EEZ00314.1| DNA gyrase subunit A [Vibrio sp. RC586]
Length = 894
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIEA-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRHAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IAVNL ++D LIG +TDG DIMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIAVNLRDDDALIGVEITDGESDIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKAEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|421565560|ref|ZP_16011333.1| DNA gyrase, A subunit [Neisseria meningitidis NM3081]
gi|402343995|gb|EJU79137.1| DNA gyrase, A subunit [Neisseria meningitidis NM3081]
Length = 916
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQ+NK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQINKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|365538782|ref|ZP_09363957.1| DNA gyrase subunit A [Vibrio ordalii ATCC 33509]
Length = 907
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 633/880 (71%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+DG L ++N + +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLTEVVDGCLAYINNEDITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKADI-EVEKNGKETIIVREIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARDRAHILEALALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPEWLEPEYGI----RDGKYFLTEQQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ +G + RR+EI + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELETVRDAFG----DARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD+ILC
Sbjct: 532 LIAREDVVVTLSHAGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILPVT----EFSDDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT LS+F+N R +G+IAVNL +D LIG +TDG+ +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLSSFANVRSNGLIAVNLREDDSLIGVDITDGNSEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VRAMGR+A GV GM+L + +V++L+V +N
Sbjct: 708 SEETPVLDENGQPVLDEHGQPEIKFKGVRAMGRTASGVRGMKLAEGDQVVSLIVPSNDG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LT T+NGYGKRT + EY R T+G++SIK ++RNG+VV A E M+IT G
Sbjct: 767 DILTVTQNGYGKRTTLGEYPTKGRATQGVVSIKVSERNGQVVGAVQTEEGDEFMMITDAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTAEDENVVGLQRIEEI 866
>gi|336124346|ref|YP_004566394.1| DNA gyrase subunit A [Vibrio anguillarum 775]
gi|335342069|gb|AEH33352.1| DNA gyrase subunit A [Vibrio anguillarum 775]
Length = 907
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/880 (52%), Positives = 634/880 (72%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++N + +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLTEVVEGCLAYINNEDITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKADI-EVEKNGKETIIVREIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARDRAHILEALALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPEWLEPEYGI----RDGKYFLTEQQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ +G + RR+EI + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELETVRDAFG----DARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD+ILC
Sbjct: 532 LIAREDVVVTLSHAGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILPVT----EFSDDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT LS+F+N R +G+IAVNL +D LIG +TDG+ +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLSSFANVRSNGLIAVNLREDDSLIGVDITDGNSEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VRAMGR+A GV GM+L + +V++L+V +N
Sbjct: 708 SEETPVLDENGQPVLDEHGQPEIKFKGVRAMGRTASGVRGMKLAEGDQVVSLIVPSNDG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LT T+NGYGKRT + EY R T+G++SIK ++RNG+VV A E M+IT G
Sbjct: 767 DILTVTQNGYGKRTTLGEYPTKGRATQGVVSIKVSERNGQVVGAVQTEEGDEFMMITDAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTAEDENVVGLQRIEEI 866
>gi|254515159|ref|ZP_05127220.1| DNA gyrase, A subunit [gamma proteobacterium NOR5-3]
gi|219677402|gb|EED33767.1| DNA gyrase, A subunit [gamma proteobacterium NOR5-3]
Length = 871
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/851 (50%), Positives = 626/851 (73%), Gaps = 11/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + A+E+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WN
Sbjct: 1 MGELAREISPVTIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ LL DLDK+T+D++ NYDG E+ P VLPTR+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRMSKIAHALLADLDKDTVDYVDNYDGTEQIPVVLPTRVPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV++ L ++++ + +I+DL++ +P PDFPT II G + + Y TG+GR+
Sbjct: 181 NIPPHNLREVVNACLALINDSDITIDDLMRYLPGPDFPTGAIINGRAGIVQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK + + R III E+PYQ+NK L+E+I++LVKEKKLE IS LRDESDK G
Sbjct: 241 YVRAKAEVITDEKTGRDTIIIHEIPYQLNKARLIERIAELVKEKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL++ EI ++VLN LY QT LQN FG+NM+ALV+GQP++LNLKEIL F+ HR+E
Sbjct: 301 LRVVIELRKGEIGDVVLNNLYAQTSLQNVFGINMVALVDGQPRVLNLKEILEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE H+LEGL IAL NID I++++++ +P +A+ ++ +W +V
Sbjct: 361 VVTRRTLYLLRKARERGHVLEGLAIALANIDRVIELVKASPSPADARESLLAQSWMPGEV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ ++ L + + Y+LS QAQ IL + L RLT +E +K++ +Y+
Sbjct: 421 TSMLERAGAEACRPDELEPFYGLHDGE-YRLSPTQAQAILDLRLHRLTGLEHEKLLKEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+ + ++ DL DIL + +R++ +I +EL I ++G RR+EI + + + EDLI
Sbjct: 480 DKLIEIADLMDILQDPERLLAVIREELEEITAEFGDE----RRTEIRDSQEDLTAEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+TLS+ GY K+QP++EY+ Q+RGG GK A+ KDED++ L IANTHD +LCFSN
Sbjct: 536 PEDRVVTLSHGGYAKTQPLAEYQVQRRGGMGKAALSVKDEDFVEHLLIANTHDTLLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
+G++YW+KV+QIP R SRG+P++N+ L E++T ILPL + D ++FM+T+
Sbjct: 596 FGKVYWIKVYQIPVAGRASRGRPMVNLLQLDEGERVTSILPLEEHTDD----RFIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++F+ PR +G+ A+ L ++D L+G A+TDGS D+MLFS GKA RF+E++V
Sbjct: 652 NGYVKKTDLASFA-PRSAGLRAIVLGDDDVLVGTAITDGSQDVMLFSSEGKATRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR++RGV G+ L + ++I+LLV + +VLT +ENGYGKRT + ++ RG KG
Sbjct: 711 RPMGRASRGVRGINLAEGHRMISLLVP-DATGTVLTVSENGYGKRTAVDDFPTKGRGGKG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I++ +++RNG++V A V E+MLI+ G L+RT+ ++ ++GR+TQGV +I +
Sbjct: 770 VIAMASSQRNGRLVGALQVFSGDELMLISNQGTLVRTQCDQVSQLGRNTQGVRIIRTKEG 829
Query: 841 SKLCGVQRLCK 851
L +R+ +
Sbjct: 830 ETLVRAERIVE 840
>gi|88705960|ref|ZP_01103668.1| DNA gyrase, subunit A [Congregibacter litoralis KT71]
gi|88699674|gb|EAQ96785.1| DNA gyrase, subunit A [Congregibacter litoralis KT71]
Length = 885
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/850 (50%), Positives = 624/850 (73%), Gaps = 11/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + A+E+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WN
Sbjct: 1 MGELAREISPVTIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R TLVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYTLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ LL DLDK+T+D++ NYDG E+ P+VLPTR+PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRMSKIAHMLLSDLDKDTVDYVDNYDGTERIPAVLPTRVPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV++ L ++ + SI+DL++ +P PDFPT II G + + Y TG+GR+
Sbjct: 181 NIPPHNLREVVNACLALIGDAHISIDDLMRYLPGPDFPTGAIINGRAGIVQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ + + R II+ E+PYQ+NK L+E+I++LVKEKKLE IS LRDESDK G
Sbjct: 241 YVRARAEVITDEKTGRDTIIVHEIPYQLNKARLIERIAELVKEKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIEL++ EI ++VLN LY QT LQN FG+NM+ALV+GQP++LNLKEIL F+ HR+E
Sbjct: 301 LRVVIELRKGEIGDVVLNNLYAQTSLQNVFGINMVALVDGQPRVLNLKEILEAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F LRKARE H+LEGL IAL NID I++++++ +P EA+ ++ W +V
Sbjct: 361 VVTRRTLFLLRKARERGHVLEGLAIALANIDKVIELVKASPSPAEARESLLAERWLPGEV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ ++ L + + Y+LS QAQ IL + L RLT +E +K++ +Y+
Sbjct: 421 TSMLERAGAEACRPDELEPFYGLHDGE-YRLSPTQAQAILDLRLHRLTGLEHEKLLKEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+ + ++ DL DIL + +R++ +I +EL I ++G RR+EI + + + EDLI
Sbjct: 480 DKLAEIADLLDILQDRERLLAVIREELEEIATEFGDE----RRTEIRDSQEDLTAEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+TLS+ GY K+QP++EY+ Q+RGG GK A+ KDED++ L IANTHD +LCF+N
Sbjct: 536 PEDRVVTLSHGGYAKTQPLAEYQVQRRGGMGKAALSVKDEDFVEHLLIANTHDTLLCFTN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YW+KV+QIP R+SRG+P++N+ L E++T ILPL + D ++FM+T+
Sbjct: 596 LGKVYWIKVYQIPVAGRSSRGRPMVNLLQLDEGERVTSILPLEEHSDD----RFIFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L++F+ PR +G+ A+ L +D L+G A+TDG+ D+MLFS GKA RF+E++V
Sbjct: 652 QGYVKKTDLASFA-PRSAGLRAIVLGEDDVLVGTAITDGNQDVMLFSSEGKATRFSESAV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR++RGV G+ L ++I+LLV + + +VLT +ENGYGKRT + ++ RG KG
Sbjct: 711 RAMGRASRGVRGINLADGHRMISLLVP-DARGTVLTVSENGYGKRTTVDDFPTKGRGGKG 769
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I++ +++RNG++V A V E+MLI+ G L+RT+ ++ ++GR+TQGV +I +
Sbjct: 770 VIAMASSERNGRLVGALQVFSGDELMLISNQGTLVRTQCDQVSQLGRNTQGVRIIRTKEG 829
Query: 841 SKLCGVQRLC 850
L V+R+
Sbjct: 830 ETLVRVERIV 839
>gi|345874847|ref|ZP_08826645.1| DNA gyrase, A subunit [Neisseria weaveri LMG 5135]
gi|343969783|gb|EGV37989.1| DNA gyrase, A subunit [Neisseria weaveri LMG 5135]
Length = 915
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/892 (52%), Positives = 631/892 (70%), Gaps = 57/892 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
+ FAKE I I LEEEM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HHFAKETIPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDGAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKIAHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + I+ L +L +P+ I+ LI I APDFPT IYG+S V +GY TG+GRV+
Sbjct: 190 IPPHNLPDTINACLQLLADPQTDIDVLINTIKAPDFPTGATIYGMSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV++K LE IS+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIIIDEIPYQVNKAKLVEKIGELVRDKVLEGISDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL FI HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILSEFIRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID IQ+I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEMIQLIKESADAPEAKEKMLARPWRSSLV 429
Query: 421 SKIIGFNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ + T+++ N+ LQ N Y LS++QA IL+M L+ LT ++Q +I+
Sbjct: 430 EEMLSRTDLDL-TMARPENLPAGLGLQQNG-YFLSELQADAILRMSLRNLTGLDQDEIVK 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y++++ +IDL DIL+ S+RI +II EL +K ++G RRSEI + + ED
Sbjct: 488 DYKSIMANIIDLLDILAKSERIDDIIRTELEEVKAQFGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPPREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N+G+ +W+KV+++P+G RNSRG+PI N+ L EK++ ILP+ R+FP++ YVF
Sbjct: 604 FTNFGKCHWIKVYKLPEGGRNSRGRPINNVIQLDEGEKVSAILPV----REFPEDEYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D L+G A T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKIQLSAFKNVRSQGIKAIALKEGDHLVGVAKTGGNDDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
N VR GR + G+ GMRL
Sbjct: 720 YWERSNEAEDADSENEDSDGIETDAAEDDSNETAAPKANGVRPSGRGSGGLRGMRLPSDG 779
Query: 740 KVIALLVSNNQKQ-----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVV 794
++++L+ + + + VLTATENGYGKRT I +Y++ +G +G I+I T +RNG++V
Sbjct: 780 RIVSLITFSPECEQDAALQVLTATENGYGKRTPIADYSRKGKGGQGNIAINTGERNGELV 839
Query: 795 AATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
AATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L +
Sbjct: 840 AATLVAETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSL 891
>gi|420138989|ref|ZP_14646860.1| DNA gyrase subunit A [Pseudomonas aeruginosa CIG1]
gi|403248266|gb|EJY61851.1| DNA gyrase subunit A [Pseudomonas aeruginosa CIG1]
Length = 920
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/889 (50%), Positives = 630/889 (70%), Gaps = 49/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL+KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ ++++L++ IP PDFPTAGII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
IRA+ +EE + R III ELPYQ+NK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+ E+VLN LY QTQLQ+ FG+N++ALV+GQP+ LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT++ELRKARE HILEG +AL+NID I++I+S+ TP EAK ++I + W
Sbjct: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++++Y
Sbjct: 421 VEAMVERAGADACRPEDLDPQYGLRDGKYY-LSPEQAQAILELRLHRLTGLEHEKLLSEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ + +L IL+N R++E+I +EL +K ++G + RR+EI+ + ++ + DLI
Sbjct: 480 QEILNLIGELIRILTNPARLMEVIREELEAVKAEFG----DARRTEIVASQVDLTIADLI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY KSQP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 TEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWL+ ++IP+ SRG+P++N+ L E+IT +L + N D
Sbjct: 596 SKGKVYWLRTFEIPEA---SRGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDE 652
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L FS PR SG+
Sbjct: 653 AEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGL 712
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++MLFS +GK +RF E+ VR MGR+ARGV GMRL K Q+
Sbjct: 713 IALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQ 772
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ TN+RNG ++AA V
Sbjct: 773 LISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQ 831
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ GR+TQGV LI + + L G++R+
Sbjct: 832 EGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERV 880
>gi|92114290|ref|YP_574218.1| DNA gyrase subunit A [Chromohalobacter salexigens DSM 3043]
gi|91797380|gb|ABE59519.1| DNA gyrase subunit A [Chromohalobacter salexigens DSM 3043]
Length = 907
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/873 (50%), Positives = 628/873 (71%), Gaps = 34/873 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + A+E++ + +E+E+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAMHE+ N WN
Sbjct: 1 MGEIAREILPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMHELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQEFSMRYVLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++ELL DL+K+T+D++ NYDG E+ P VLPT++PNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMSRLAHELLADLEKDTVDWVDNYDGTERIPEVLPTKVPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ E+IDG L ++ + SI+DL+ IP PDFPT GII G + + + Y TG+GR+
Sbjct: 181 NIPPHNMREIIDGCLALIDDYTLSIDDLMAYIPGPDFPTGGIINGRAGILEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE + R II+ ELPYQVNK L+EKI++LVK+K++E I+ LRDESDK G
Sbjct: 241 YVRARHTIEHDEKTGRDHIIVTELPYQVNKARLIEKIAELVKDKRIEGIAELRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE+KR E ++V+N L+ TQLQ FG+NM+AL NGQPK+LNLKEIL F+ HR+E
Sbjct: 301 LRVVIEVKRGESGDVVVNNLFAHTQLQTVFGINMVALDNGQPKILNLKEILEAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KAR+ HILEGL +A++NID I++I+++ + EAK K++ W V
Sbjct: 361 VVTRRTLFELKKARDRGHILEGLAVAISNIDEVIELIKASPSAAEAKEKLVARAWRPGQV 420
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + +++ QN Y+LS QAQ IL++ L RLT +E +K+++
Sbjct: 421 TDMLERAGATSCKPEDLEEGYGLAEGQNE--YRLSPAQAQAILELRLHRLTGLETEKLLD 478
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y +++K++ +L +IL++ +R++++I +EL I+++YG R++EI + ++ + ED
Sbjct: 479 EYLSILKRIAELNEILASPERLLDVIREELQAIRDQYGDE----RKTEIQASHLDLTIED 534
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +DMV+T+S GY K+QP+S+Y+AQ+RGGRGK A KDED I L +A+THD +L
Sbjct: 535 LINEEDMVVTISRSGYAKTQPLSDYQAQRRGGRGKSATTMKDEDIIEHLLVASTHDTVLL 594
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FSN G++YWLKV+++P SR SRGKP+IN+ L E I ILP+ R++ +++Y+F
Sbjct: 595 FSNRGKVYWLKVYEMPNASRGSRGKPLINLLPLDEGEAINAILPV----REYREDSYIFF 650
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VK+T L FS PR G+IA++L +D L+GAA+T G+ ML S +GKA+RF E
Sbjct: 651 ATAKGTVKRTSLEQFSRPRSVGLIAIDLEEDDRLVGAAITSGNDHAMLLSSNGKAIRFEE 710
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNN---------------------QKQSVLT 756
+VRAMGR+ARGV GMRL+ +VI+L++ + + +LT
Sbjct: 711 GNVRAMGRTARGVRGMRLQGGAEVISLIIPQSLTIDAETDDDAEERPVETVGEDQVYILT 770
Query: 757 ATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIR 816
A+ENGYGKRT + E+ RG +G+I+++T++RNG +VAA V E+MLIT G L+R
Sbjct: 771 ASENGYGKRTRLDEFPLRGRGGQGVIAMQTSQRNGALVAAIQVRDSDEMMLITDKGTLVR 830
Query: 817 TRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
TRV E+ R+TQGV LI L R+
Sbjct: 831 TRVGEVSVSSRNTQGVTLIRTGEGEHLVATVRV 863
>gi|268594969|ref|ZP_06129136.1| DNA gyrase subunit A [Neisseria gonorrhoeae 35/02]
gi|268548358|gb|EEZ43776.1| DNA gyrase subunit A [Neisseria gonorrhoeae 35/02]
Length = 916
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/896 (52%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDFAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L P+ I++LI II APDFPT IYGL V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPKTEIDELIDIIQAPDFPTGATIYGLGGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++QK+II
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKKQG--YYLSEIQADAILRMSLRNLTGLDQKEIIE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
N VR GR + G+ GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDDLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|398850873|ref|ZP_10607568.1| DNA gyrase, A subunit [Pseudomonas sp. GM80]
gi|398247721|gb|EJN33156.1| DNA gyrase, A subunit [Pseudomonas sp. GM80]
Length = 924
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/886 (50%), Positives = 630/886 (71%), Gaps = 43/886 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L+ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG ++RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSAVRLMEVIREELEVIRAEYG----DVRRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILP--LSNNKR---------- 647
+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +LP L KR
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMKRQAEEEEAEGV 655
Query: 648 ------------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAV 683
D K ++FMST+ G VKKT L FS R G+IA+
Sbjct: 656 EVDVEEIENSNETDEERRARIKAADRKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLIAL 715
Query: 684 NLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIA 743
L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+I+
Sbjct: 716 ELDEGDILISAAVTDGEQEIMLFSDGGKVTRFKESEVRAMGRTARGVRGMRLPEGQKLIS 775
Query: 744 LLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYH 803
+L+ + +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V
Sbjct: 776 MLIP-EEGSEILTASERGYGKRTAITEFPEYKRGGQGVIAMVSNERNGRLVGAVQVQDGE 834
Query: 804 EIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDETLVGLERV 880
>gi|421561466|ref|ZP_16007313.1| DNA gyrase, A subunit [Neisseria meningitidis NM2657]
gi|254669835|emb|CBA04223.1| DNA gyrase subunit A [Neisseria meningitidis alpha153]
gi|402338397|gb|EJU73632.1| DNA gyrase, A subunit [Neisseria meningitidis NM2657]
Length = 916
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRVI
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVI 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|424807804|ref|ZP_18233206.1| DNA gyrase, subunit A [Vibrio mimicus SX-4]
gi|342324341|gb|EGU20122.1| DNA gyrase, subunit A [Vibrio mimicus SX-4]
Length = 893
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/904 (51%), Positives = 628/904 (69%), Gaps = 45/904 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRHAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKAEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPVITI---DGPTA 869
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I + + D P A
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEIEESELPEGEEALVENDAPVA 886
Query: 870 SGKG 873
G
Sbjct: 887 QDDG 890
>gi|192382546|gb|ACF04294.1| GyrA [Neisseria meningitidis]
gi|192382548|gb|ACF04295.1| GyrA [Neisseria meningitidis]
Length = 916
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRVI
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVI 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGLVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|417820671|ref|ZP_12467285.1| DNA gyrase, A subunit [Vibrio cholerae HE39]
gi|423952435|ref|ZP_17734149.1| DNA gyrase, A subunit [Vibrio cholerae HE-40]
gi|423982087|ref|ZP_17737932.1| DNA gyrase, A subunit [Vibrio cholerae HE-46]
gi|340038302|gb|EGQ99276.1| DNA gyrase, A subunit [Vibrio cholerae HE39]
gi|408660266|gb|EKL31287.1| DNA gyrase, A subunit [Vibrio cholerae HE-40]
gi|408665087|gb|EKL35906.1| DNA gyrase, A subunit [Vibrio cholerae HE-46]
Length = 894
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 622/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKAEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|385341699|ref|YP_005895570.1| DNA gyrase subunit A [Neisseria meningitidis M01-240149]
gi|385857454|ref|YP_005903966.1| DNA gyrase subunit A [Neisseria meningitidis NZ-05/33]
gi|421567734|ref|ZP_16013468.1| DNA gyrase, A subunit [Neisseria meningitidis NM3001]
gi|254672258|emb|CBA05271.1| DNA gyrase subunit A [Neisseria meningitidis alpha275]
gi|325201905|gb|ADY97359.1| DNA gyrase, A subunit [Neisseria meningitidis M01-240149]
gi|325208343|gb|ADZ03795.1| DNA gyrase, A subunit [Neisseria meningitidis NZ-05/33]
gi|402343767|gb|EJU78913.1| DNA gyrase, A subunit [Neisseria meningitidis NM3001]
Length = 916
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESPNAVEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|153212262|ref|ZP_01948050.1| DNA gyrase, subunit A [Vibrio cholerae 1587]
gi|124116640|gb|EAY35460.1| DNA gyrase, subunit A [Vibrio cholerae 1587]
Length = 894
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR STP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRASTPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|218768400|ref|YP_002342912.1| DNA gyrase subunit A [Neisseria meningitidis Z2491]
gi|385338234|ref|YP_005892107.1| DNA gyrase subunit A [Neisseria meningitidis WUE 2594]
gi|433475083|ref|ZP_20432424.1| DNA gyrase, A subunit [Neisseria meningitidis 88050]
gi|433479871|ref|ZP_20437161.1| DNA gyrase, A subunit [Neisseria meningitidis 63041]
gi|433513705|ref|ZP_20470495.1| DNA gyrase, A subunit [Neisseria meningitidis 63049]
gi|433515942|ref|ZP_20472710.1| DNA gyrase, A subunit [Neisseria meningitidis 2004090]
gi|433517778|ref|ZP_20474524.1| DNA gyrase, A subunit [Neisseria meningitidis 96023]
gi|433520160|ref|ZP_20476880.1| DNA gyrase, A subunit [Neisseria meningitidis 65014]
gi|433524161|ref|ZP_20480822.1| DNA gyrase, A subunit [Neisseria meningitidis 97020]
gi|433528454|ref|ZP_20485063.1| DNA gyrase, A subunit [Neisseria meningitidis NM3652]
gi|433530655|ref|ZP_20487244.1| DNA gyrase, A subunit [Neisseria meningitidis NM3642]
gi|433532923|ref|ZP_20489486.1| DNA gyrase, A subunit [Neisseria meningitidis 2007056]
gi|433534676|ref|ZP_20491216.1| DNA gyrase, A subunit [Neisseria meningitidis 2001212]
gi|433541238|ref|ZP_20497690.1| DNA gyrase, A subunit [Neisseria meningitidis 63006]
gi|121052408|emb|CAM08741.1| DNA gyrase subunit A [Neisseria meningitidis Z2491]
gi|319410648|emb|CBY91018.1| DNA gyrase subunit A [Neisseria meningitidis WUE 2594]
gi|432210901|gb|ELK66856.1| DNA gyrase, A subunit [Neisseria meningitidis 88050]
gi|432216210|gb|ELK72092.1| DNA gyrase, A subunit [Neisseria meningitidis 63041]
gi|432247237|gb|ELL02676.1| DNA gyrase, A subunit [Neisseria meningitidis 63049]
gi|432252868|gb|ELL08218.1| DNA gyrase, A subunit [Neisseria meningitidis 2004090]
gi|432253514|gb|ELL08858.1| DNA gyrase, A subunit [Neisseria meningitidis 96023]
gi|432254882|gb|ELL10216.1| DNA gyrase, A subunit [Neisseria meningitidis 65014]
gi|432259405|gb|ELL14676.1| DNA gyrase, A subunit [Neisseria meningitidis 97020]
gi|432265255|gb|ELL20451.1| DNA gyrase, A subunit [Neisseria meningitidis NM3652]
gi|432266746|gb|ELL21928.1| DNA gyrase, A subunit [Neisseria meningitidis 2007056]
gi|432267162|gb|ELL22343.1| DNA gyrase, A subunit [Neisseria meningitidis NM3642]
gi|432271418|gb|ELL26543.1| DNA gyrase, A subunit [Neisseria meningitidis 2001212]
gi|432277251|gb|ELL32300.1| DNA gyrase, A subunit [Neisseria meningitidis 63006]
Length = 916
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRVI
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVI 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGLVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|421540637|ref|ZP_15986782.1| DNA gyrase, A subunit [Neisseria meningitidis 93004]
gi|402318791|gb|EJU54307.1| DNA gyrase, A subunit [Neisseria meningitidis 93004]
Length = 916
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGLVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|319638198|ref|ZP_07992961.1| DNA gyrase subunit A [Neisseria mucosa C102]
gi|317400471|gb|EFV81129.1| DNA gyrase subunit A [Neisseria mucosa C102]
Length = 923
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/889 (52%), Positives = 628/889 (70%), Gaps = 52/889 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMEKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + I+ L +L PE I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLGDTINACLRLLDEPETEIDELINIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESANAPEAKEKLLSRPWRSSLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + L ++ Y LS++QA IL+M L+ LT ++Q++I+ +Y
Sbjct: 430 EDMLSRTDLDLQMMRPEGLPENLGLHSQGYYLSELQADAILRMSLRNLTGLDQEEIVGEY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DILS +R+ +II +EL IK +G RRSEI + + EDLI
Sbjct: 490 KNLMSKIIDFVDILSKPERVTQIIREELADIKANFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN--- 716
+ G+VKK LS F N R GI A+ L +D+L+GAA T G+ DIMLFS+ GKA+RFN
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAIALKEDDYLVGAAQTGGADDIMLFSNLGKAIRFNEYW 721
Query: 717 -------------------------ENSVRAMGRSARGV----------IGMRLEKKQKV 741
EN+ A+ GV GMRL K+
Sbjct: 722 EKSGNDEAEDADIETENEDSDGLDDENAENALPSGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + +QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAEQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
LV+ ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L +
Sbjct: 842 LVSETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGETLVSL 890
>gi|229515631|ref|ZP_04405090.1| DNA gyrase subunit A [Vibrio cholerae TMA 21]
gi|229347400|gb|EEO12360.1| DNA gyrase subunit A [Vibrio cholerae TMA 21]
Length = 894
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNESITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR STP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRASTPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|339478116|ref|YP_004706936.1| DNA gyrase subunit A [Candidatus Moranella endobia PCIT]
gi|338172667|gb|AEI75068.1| DNA gyrase subunit A [Candidatus Moranella endobia PCIT]
Length = 884
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/853 (52%), Positives = 626/853 (73%), Gaps = 12/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +EEE+ +SYLDYAMSVIVGRALP+VRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSNLAKEITPVNIEEELKRSYLDYAMSVIVGRALPNVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KSYKKSARVVGDVIGKYHPHGDMAVYDTIVRMAQPFSLRYPLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL+DLDK+T+D++ NYDG E+ P VLPTRIPNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLVDLDKDTVDYVPNYDGTEQIPDVLPTRIPNLLVNGSTGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
+IPPHNL+EVIDG L + + S+ L+ I PDFPTA I G + D Y TG+G++
Sbjct: 181 SIPPHNLSEVIDGCLAYIADENISVEGLMSHITGPDFPTAASINGRRGIEDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ + + R II+ E+PYQVNK +L+EKIS+L+KEK++E IS LRDESD+ G
Sbjct: 241 YIRARAEVATETKTGREIIIVYEIPYQVNKANLIEKISELIKEKRVEGISGLRDESDQDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLNKLY T LQ +FG+NM+AL +G+PK+L+LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDTVGEVVLNKLYSMTPLQVSFGINMVALHHGKPKILSLKDILSAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE + +AL N+D+ I +IR +TP AK ++ +W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEAIAVALVNLDSMIDLIRQATTPAAAKTNLVARSWELFTV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
+ ++ K +T K N Y L++ QAQ IL + LQ+LT +E K++++Y
Sbjct: 421 ADML---KSTVDTARPEWLEPKYGIYNGQYYLTEQQAQAILDLRLQKLTGLEYAKLLDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
++ K+ +L IL +S R++E+I+ EL +K +Y + RR++II N + EDLI
Sbjct: 478 NLLLTKIAELILILQHSDRLMEVISKELIALKEQY----NDTRRTKIIANNSDIKIEDLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+ +DMV+TLS+ GY+KSQPI+EY+AQ+RGG+GK A K D+I++L IANTH+ IL FS
Sbjct: 534 SQEDMVVTLSHHGYVKSQPITEYKAQRRGGKGKSAASIKKGDFIDRLLIANTHETILLFS 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N GR+YWLKV+Q+P+ R++RG+PI+N+ L++ E+IT ILP+ R++ ++FM+T
Sbjct: 594 NRGRMYWLKVYQLPEARRSARGRPIVNLLPLESNERITAILPV----REYQYGYHIFMAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKKT + NF R +GI A+NL++ D LIG LT+G+ D+MLFS GK VRF E
Sbjct: 650 ANGTVKKTSVINFRRQRSTGITAINLNHGDELIGVDLTNGNDDVMLFSTHGKVVRFPETQ 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR+MGR+A GV+G+ L + +V++L+V + K ++LT T++GYGKRT+ EY +R T+
Sbjct: 710 VRSMGRTATGVLGINLAEDDRVVSLIVPRSSKGTILTVTQHGYGKRTVPAEYPTKSRATQ 769
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+ISIK +KRNG+VV A V Y +IM+IT G L+R RVSE++ +GR+T GV LI
Sbjct: 770 GVISIKVSKRNGEVVGAVQVEDYDQIMMITNTGNLVRMRVSEVKIVGRNTNGVTLIRTAQ 829
Query: 840 KSKLCGVQRLCKI 852
+ G+QR+ I
Sbjct: 830 NENVVGLQRIADI 842
>gi|385855437|ref|YP_005901950.1| DNA gyrase subunit A [Neisseria meningitidis M01-240355]
gi|325204378|gb|ADY99831.1| DNA gyrase, A subunit [Neisseria meningitidis M01-240355]
Length = 916
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRVI
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVI 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLAYPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|421563586|ref|ZP_16009405.1| DNA gyrase, A subunit [Neisseria meningitidis NM2795]
gi|421907113|ref|ZP_16337001.1| DNA gyrase subunit A [Neisseria meningitidis alpha704]
gi|433537003|ref|ZP_20493508.1| DNA gyrase, A subunit [Neisseria meningitidis 77221]
gi|393292077|emb|CCI72977.1| DNA gyrase subunit A [Neisseria meningitidis alpha704]
gi|402341282|gb|EJU76469.1| DNA gyrase, A subunit [Neisseria meningitidis NM2795]
gi|432273939|gb|ELL29036.1| DNA gyrase, A subunit [Neisseria meningitidis 77221]
Length = 916
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|410663081|ref|YP_006915452.1| DNA gyrase subunit A [Simiduia agarivorans SA1 = DSM 21679]
gi|409025438|gb|AFU97722.1| DNA gyrase subunit A [Simiduia agarivorans SA1 = DSM 21679]
Length = 853
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/852 (51%), Positives = 624/852 (73%), Gaps = 14/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MGEIAKEISPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+++LL DLDKET+D++ NYDG E+ P+VLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKIAHDLLADLDKETVDYVPNYDGTEQIPAVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ N + +I++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVVKGCLALIDNADITIDELMEYIPGPDFPTAAIINGRAGIIEAYKTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + +R I+I E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTSRERIVISEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIELKR E+ +++LN LY QTQL+N FG+N++ALV+GQP++LNLKE+L YF+ HR+E
Sbjct: 301 LRVVIELKRGEVGDVILNNLYAQTQLENVFGINIVALVDGQPRILNLKEMLEYFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE HILEGL +A+ NID I++I++++TP +AK+ ++ W +
Sbjct: 361 VVTRRTVYLLRKARERGHILEGLAVAIANIDPVIELIKASATPADAKDALLARGWESGTI 420
Query: 421 SKIIGFNKKNYNTISKINNISKL--QNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S+ F ++ + + + + + + Y LS QAQ IL++ L RLT ME K++ +
Sbjct: 421 SQ---FLERAGSDACRPDGLPEQFGMRDGRYYLSPEQAQAILELRLHRLTGMEHDKLLAE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ + ++ + +IL +S R++E+I EL + +G RRSEI+ + + + EDL
Sbjct: 478 YQEKLNQIAEYLEILGSSVRLMEVIRGELEQVLVDFGDE----RRSEIVTSRRDLTIEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D V+T+S+ GY KSQP+++Y+AQ+RGG+GK A KDED++ L IANTH IL F
Sbjct: 534 ITEEDRVVTISHGGYAKSQPLTDYQAQRRGGQGKSATAVKDEDFVEHLLIANTHTTILLF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
+N G++YWLKV++IP R SRG+P++N+ L E++T ILP+ ++ ++++FM+
Sbjct: 594 TNAGKVYWLKVYEIPLAGRQSRGRPVVNLLPLAEGERVTSILPVD----EYDDDHFIFMA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L+ FS PR G+ A+ L D L+ A+TDG I+LF+ +GKA RF E+
Sbjct: 650 TANGTVKKTALTQFSRPRSVGLKAIELDEGDQLVETAITDGKQTIILFASTGKAARFAED 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR+MGR +RGV G+R+ + V+ ++V + VLT +ENGYGKRT + E+ RG+
Sbjct: 710 DVRSMGRVSRGVRGIRMPEGATVVGMVVP-QENGYVLTVSENGYGKRTQVDEFPTKGRGS 768
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I++ +++RNG +V A V EIMLI+ G L+RTRV E+ + R+TQGV LI V+
Sbjct: 769 QGVIAMASSERNGALVGAVQVMDGEEIMLISDLGTLVRTRVDEVSVLSRNTQGVRLIKVK 828
Query: 839 NKSKLCGVQRLC 850
+ +L GV+R+
Sbjct: 829 DGEQLVGVERIA 840
>gi|240013958|ref|ZP_04720871.1| DNA gyrase subunit A [Neisseria gonorrhoeae DGI18]
gi|240016400|ref|ZP_04722940.1| DNA gyrase subunit A [Neisseria gonorrhoeae FA6140]
gi|240121527|ref|ZP_04734489.1| DNA gyrase subunit A [Neisseria gonorrhoeae PID24-1]
gi|254493910|ref|ZP_05107081.1| DNA gyrase subunit A [Neisseria gonorrhoeae 1291]
gi|268599197|ref|ZP_06133364.1| DNA gyrase subunit A [Neisseria gonorrhoeae MS11]
gi|268684504|ref|ZP_06151366.1| DNA gyrase subunit A [Neisseria gonorrhoeae SK-92-679]
gi|291043610|ref|ZP_06569326.1| DNA gyrase subunit A [Neisseria gonorrhoeae DGI2]
gi|226512950|gb|EEH62295.1| DNA gyrase subunit A [Neisseria gonorrhoeae 1291]
gi|268583328|gb|EEZ48004.1| DNA gyrase subunit A [Neisseria gonorrhoeae MS11]
gi|268624788|gb|EEZ57188.1| DNA gyrase subunit A [Neisseria gonorrhoeae SK-92-679]
gi|291012073|gb|EFE04062.1| DNA gyrase subunit A [Neisseria gonorrhoeae DGI2]
Length = 916
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/896 (52%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L P+ I++LI II APDFPT IYGL V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPKTEIDELIDIIQAPDFPTGATIYGLGGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++QK+II
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKKQG--YYLSEIQADAILRMSLRNLTGLDQKEIIE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
N VR GR + G+ GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDDLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|255745655|ref|ZP_05419603.1| DNA gyrase subunit A [Vibrio cholera CIRS 101]
gi|360035157|ref|YP_004936920.1| DNA gyrase, A subunit [Vibrio cholerae O1 str. 2010EL-1786]
gi|417813278|ref|ZP_12459935.1| DNA gyrase, A subunit [Vibrio cholerae HC-49A2]
gi|417816144|ref|ZP_12462776.1| DNA gyrase, A subunit [Vibrio cholerae HCUF01]
gi|418337035|ref|ZP_12945933.1| DNA gyrase, A subunit [Vibrio cholerae HC-23A1]
gi|418343549|ref|ZP_12950335.1| DNA gyrase, A subunit [Vibrio cholerae HC-28A1]
gi|418348702|ref|ZP_12953436.1| DNA gyrase, A subunit [Vibrio cholerae HC-43A1]
gi|421320870|ref|ZP_15771427.1| DNA gyrase, A subunit [Vibrio cholerae CP1038(11)]
gi|421324863|ref|ZP_15775389.1| DNA gyrase, A subunit [Vibrio cholerae CP1041(14)]
gi|421328524|ref|ZP_15779038.1| DNA gyrase, A subunit [Vibrio cholerae CP1042(15)]
gi|421335119|ref|ZP_15785586.1| DNA gyrase, A subunit [Vibrio cholerae CP1048(21)]
gi|421339013|ref|ZP_15789448.1| DNA gyrase, A subunit [Vibrio cholerae HC-20A2]
gi|421347151|ref|ZP_15797533.1| DNA gyrase, A subunit [Vibrio cholerae HC-46A1]
gi|422891366|ref|ZP_16933746.1| DNA gyrase, A subunit [Vibrio cholerae HC-40A1]
gi|422902578|ref|ZP_16937577.1| DNA gyrase, A subunit [Vibrio cholerae HC-48A1]
gi|422906456|ref|ZP_16941288.1| DNA gyrase, A subunit [Vibrio cholerae HC-70A1]
gi|422913042|ref|ZP_16947561.1| DNA gyrase, A subunit [Vibrio cholerae HFU-02]
gi|422925522|ref|ZP_16958547.1| DNA gyrase, A subunit [Vibrio cholerae HC-38A1]
gi|423144844|ref|ZP_17132453.1| DNA gyrase, A subunit [Vibrio cholerae HC-19A1]
gi|423149522|ref|ZP_17136850.1| DNA gyrase, A subunit [Vibrio cholerae HC-21A1]
gi|423153338|ref|ZP_17140532.1| DNA gyrase, A subunit [Vibrio cholerae HC-22A1]
gi|423156150|ref|ZP_17143254.1| DNA gyrase, A subunit [Vibrio cholerae HC-32A1]
gi|423159976|ref|ZP_17146944.1| DNA gyrase, A subunit [Vibrio cholerae HC-33A2]
gi|423164695|ref|ZP_17151453.1| DNA gyrase, A subunit [Vibrio cholerae HC-48B2]
gi|423730825|ref|ZP_17704139.1| DNA gyrase, A subunit [Vibrio cholerae HC-17A1]
gi|423754498|ref|ZP_17712146.1| DNA gyrase, A subunit [Vibrio cholerae HC-50A2]
gi|423892515|ref|ZP_17726198.1| DNA gyrase, A subunit [Vibrio cholerae HC-62A1]
gi|423927295|ref|ZP_17730817.1| DNA gyrase, A subunit [Vibrio cholerae HC-77A1]
gi|424001837|ref|ZP_17744923.1| DNA gyrase, A subunit [Vibrio cholerae HC-17A2]
gi|424005998|ref|ZP_17748978.1| DNA gyrase, A subunit [Vibrio cholerae HC-37A1]
gi|424024017|ref|ZP_17763677.1| DNA gyrase, A subunit [Vibrio cholerae HC-62B1]
gi|424026867|ref|ZP_17766480.1| DNA gyrase, A subunit [Vibrio cholerae HC-69A1]
gi|424594838|ref|ZP_18034171.1| DNA gyrase, A subunit [Vibrio cholerae CP1040(13)]
gi|424606434|ref|ZP_18045394.1| DNA gyrase, A subunit [Vibrio cholerae CP1050(23)]
gi|424610264|ref|ZP_18049118.1| DNA gyrase, A subunit [Vibrio cholerae HC-39A1]
gi|424616888|ref|ZP_18055575.1| DNA gyrase, A subunit [Vibrio cholerae HC-42A1]
gi|424644813|ref|ZP_18082561.1| DNA gyrase, A subunit [Vibrio cholerae HC-56A2]
gi|424652491|ref|ZP_18089967.1| DNA gyrase, A subunit [Vibrio cholerae HC-57A2]
gi|424656393|ref|ZP_18093691.1| DNA gyrase, A subunit [Vibrio cholerae HC-81A2]
gi|443503345|ref|ZP_21070326.1| DNA gyrase, A subunit [Vibrio cholerae HC-64A1]
gi|443507252|ref|ZP_21074036.1| DNA gyrase, A subunit [Vibrio cholerae HC-65A1]
gi|443511378|ref|ZP_21078033.1| DNA gyrase, A subunit [Vibrio cholerae HC-67A1]
gi|443514932|ref|ZP_21081460.1| DNA gyrase, A subunit [Vibrio cholerae HC-68A1]
gi|443518732|ref|ZP_21085142.1| DNA gyrase, A subunit [Vibrio cholerae HC-71A1]
gi|443523620|ref|ZP_21089848.1| DNA gyrase, A subunit [Vibrio cholerae HC-72A2]
gi|443535006|ref|ZP_21100901.1| DNA gyrase, A subunit [Vibrio cholerae HC-80A1]
gi|443538575|ref|ZP_21104430.1| DNA gyrase, A subunit [Vibrio cholerae HC-81A1]
gi|255736730|gb|EET92127.1| DNA gyrase subunit A [Vibrio cholera CIRS 101]
gi|340041870|gb|EGR02836.1| DNA gyrase, A subunit [Vibrio cholerae HCUF01]
gi|340042582|gb|EGR03547.1| DNA gyrase, A subunit [Vibrio cholerae HC-49A2]
gi|341623591|gb|EGS49115.1| DNA gyrase, A subunit [Vibrio cholerae HC-70A1]
gi|341623664|gb|EGS49187.1| DNA gyrase, A subunit [Vibrio cholerae HC-48A1]
gi|341624660|gb|EGS50145.1| DNA gyrase, A subunit [Vibrio cholerae HC-40A1]
gi|341639479|gb|EGS64096.1| DNA gyrase, A subunit [Vibrio cholerae HFU-02]
gi|341647392|gb|EGS71474.1| DNA gyrase, A subunit [Vibrio cholerae HC-38A1]
gi|356419791|gb|EHH73328.1| DNA gyrase, A subunit [Vibrio cholerae HC-21A1]
gi|356425010|gb|EHH78399.1| DNA gyrase, A subunit [Vibrio cholerae HC-19A1]
gi|356431554|gb|EHH84758.1| DNA gyrase, A subunit [Vibrio cholerae HC-22A1]
gi|356432613|gb|EHH85810.1| DNA gyrase, A subunit [Vibrio cholerae HC-23A1]
gi|356436293|gb|EHH89411.1| DNA gyrase, A subunit [Vibrio cholerae HC-28A1]
gi|356441824|gb|EHH94700.1| DNA gyrase, A subunit [Vibrio cholerae HC-32A1]
gi|356447441|gb|EHI00232.1| DNA gyrase, A subunit [Vibrio cholerae HC-43A1]
gi|356449092|gb|EHI01852.1| DNA gyrase, A subunit [Vibrio cholerae HC-33A2]
gi|356455504|gb|EHI08146.1| DNA gyrase, A subunit [Vibrio cholerae HC-48B2]
gi|356646311|gb|AET26366.1| DNA gyrase, A subunit [Vibrio cholerae O1 str. 2010EL-1786]
gi|395920533|gb|EJH31355.1| DNA gyrase, A subunit [Vibrio cholerae CP1041(14)]
gi|395923852|gb|EJH34663.1| DNA gyrase, A subunit [Vibrio cholerae CP1038(11)]
gi|395930030|gb|EJH40779.1| DNA gyrase, A subunit [Vibrio cholerae CP1042(15)]
gi|395936980|gb|EJH47703.1| DNA gyrase, A subunit [Vibrio cholerae CP1048(21)]
gi|395943961|gb|EJH54635.1| DNA gyrase, A subunit [Vibrio cholerae HC-20A2]
gi|395946211|gb|EJH56875.1| DNA gyrase, A subunit [Vibrio cholerae HC-46A1]
gi|395960736|gb|EJH71097.1| DNA gyrase, A subunit [Vibrio cholerae HC-56A2]
gi|395961793|gb|EJH72104.1| DNA gyrase, A subunit [Vibrio cholerae HC-57A2]
gi|395965139|gb|EJH75323.1| DNA gyrase, A subunit [Vibrio cholerae HC-42A1]
gi|408008498|gb|EKG46476.1| DNA gyrase, A subunit [Vibrio cholerae HC-39A1]
gi|408035111|gb|EKG71590.1| DNA gyrase, A subunit [Vibrio cholerae CP1040(13)]
gi|408045021|gb|EKG80894.1| DNA gyrase, A subunit [Vibrio cholerae CP1050(23)]
gi|408055702|gb|EKG90618.1| DNA gyrase, A subunit [Vibrio cholerae HC-81A2]
gi|408625581|gb|EKK98487.1| DNA gyrase, A subunit [Vibrio cholerae HC-17A1]
gi|408638423|gb|EKL10323.1| DNA gyrase, A subunit [Vibrio cholerae HC-50A2]
gi|408656457|gb|EKL27552.1| DNA gyrase, A subunit [Vibrio cholerae HC-77A1]
gi|408657688|gb|EKL28765.1| DNA gyrase, A subunit [Vibrio cholerae HC-62A1]
gi|408847397|gb|EKL87468.1| DNA gyrase, A subunit [Vibrio cholerae HC-37A1]
gi|408848585|gb|EKL88633.1| DNA gyrase, A subunit [Vibrio cholerae HC-17A2]
gi|408871580|gb|EKM10814.1| DNA gyrase, A subunit [Vibrio cholerae HC-62B1]
gi|408879951|gb|EKM18888.1| DNA gyrase, A subunit [Vibrio cholerae HC-69A1]
gi|443432300|gb|ELS74829.1| DNA gyrase, A subunit [Vibrio cholerae HC-64A1]
gi|443436285|gb|ELS82408.1| DNA gyrase, A subunit [Vibrio cholerae HC-65A1]
gi|443439553|gb|ELS89251.1| DNA gyrase, A subunit [Vibrio cholerae HC-67A1]
gi|443443762|gb|ELS97047.1| DNA gyrase, A subunit [Vibrio cholerae HC-68A1]
gi|443447781|gb|ELT04423.1| DNA gyrase, A subunit [Vibrio cholerae HC-71A1]
gi|443450352|gb|ELT10628.1| DNA gyrase, A subunit [Vibrio cholerae HC-72A2]
gi|443461868|gb|ELT32924.1| DNA gyrase, A subunit [Vibrio cholerae HC-80A1]
gi|443466164|gb|ELT40823.1| DNA gyrase, A subunit [Vibrio cholerae HC-81A1]
Length = 894
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/880 (52%), Positives = 622/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLING+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|386286358|ref|ZP_10063548.1| DNA gyrase subunit A [gamma proteobacterium BDW918]
gi|385280508|gb|EIF44430.1| DNA gyrase subunit A [gamma proteobacterium BDW918]
Length = 880
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/849 (52%), Positives = 616/849 (72%), Gaps = 10/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE++ + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MADIAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 KGYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++E+L DLDKET+D++ NYDG E+ P V+PT+IP LLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMRKIAHEILADLDKETVDWVPNYDGTEQIPEVMPTKIPALLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L L NP+ ++ +L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVINGCLATLDNPDITVEELMEHIPGPDFPTAAIINGRAGIVEAYKTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ + + +R II+ ELPYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YIRARAEVIVDEKTHRETIIVHELPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE+KR E E+VLN LY QTQLQN FG+N++ALV+ QP++LNLK+++ YFI HR+E
Sbjct: 301 LRVVIEMKRGESGEVVLNNLYAQTQLQNVFGINIVALVDKQPRILNLKQLIEYFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE H+LEGL IA++NID I I++++T QEAK+ +I W L DV
Sbjct: 361 VVTRRTVYLLRKARERGHVLEGLAIAISNIDEIITTIKASATTQEAKDALISRPWKLGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ +N + ++ +++ Y LS +Q Q IL + LQ+LT +E +K++ +Y+
Sbjct: 421 AGMLERAGENACRPDDLEDMYGMRDGQYY-LSPVQVQAILDLRLQKLTGLEHEKLLGEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+ ++ + +IL+N +I +I EL + YG RRSEI+ + ++ + EDLI
Sbjct: 480 ERLLEIAEYLNILANPDVLIAVIRGELEQVVADYGDE----RRSEIVASHLDLNHEDLIP 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+T+SN GY KSQP+ Y+AQ+RGG GK A KDED++ L + NTH ILCFSN
Sbjct: 536 EEDRVVTISNGGYAKSQPLDTYQAQRRGGMGKSATSVKDEDFVEHLLVVNTHTTILCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+QIP RNSRG+P++N+ L E+IT ILP++ ++ + ++FM+T
Sbjct: 596 IGKVYWLKVYQIPVAGRNSRGRPMVNLLPLGEDERITSILPVN----EYTEGYFIFMATG 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
LG VKKT L FS R G+ A+ L D LIG A+T+G DI+L + +GKA RF E V
Sbjct: 652 LGTVKKTPLEAFSRQRSVGLRAIELDEGDVLIGTAITNGENDILLLTSAGKAARFAEQDV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+ARGV G+R+++ Q+ IA+++ + VLT +ENGYGKRTL++++ RG +G
Sbjct: 712 RAMGRTARGVRGIRMDEGQRAIAMIIP-QEGGCVLTVSENGYGKRTLVEDFPAKGRGNRG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I++ ++RNG +V A V ++MLI+ G L+RTR E+ + R+TQGV +I ++
Sbjct: 771 VIAMAMSERNGPLVGAVQVFEGDDLMLISDQGTLVRTRTDEVSILSRNTQGVRVIRLKED 830
Query: 841 SKLCGVQRL 849
L GVQR+
Sbjct: 831 EHLVGVQRV 839
>gi|167469188|ref|ZP_02333892.1| DNA gyrase, A subunit [Yersinia pestis FV-1]
Length = 862
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/822 (55%), Positives = 605/822 (73%), Gaps = 10/822 (1%)
Query: 30 VGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSIYDAL 89
VGRALPDVRDGLKPV RRVLFAM+ + + WN+P+ K ARVVG+ +GKYHPHGD ++YD +
Sbjct: 1 VGRALPDVRDGLKPVKRRVLFAMNVLGHDWNKPYKKSARVVGDVIGKYHPHGDSAVYDTI 60
Query: 90 VRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDFISNY 149
VRMAQ FSLR LVDGQGNFGS+DGDSAAAMRYTE R++KI++ELL DL+K+T+DF+ NY
Sbjct: 61 VRMAQPFSLRYMLVDGQGNFGSVDGDSAAAMRYTEIRMSKIAHELLADLEKDTVDFVPNY 120
Query: 150 DGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSINDLI 209
DG E+ P+V+PTRIPNLL+NGSSGIAVGMATNIPPHNL+EVIDG L + + SI L+
Sbjct: 121 DGTEQIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNLSEVIDGCLAYIEDENISIEGLM 180
Query: 210 KIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELPYQVN 269
+ IP PDFPTA II G + + Y TG+G+V IRA+ +E + R II+ E+PYQVN
Sbjct: 181 EYIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEADAKTGRETIIVHEIPYQVN 240
Query: 270 KKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQLQNT 329
K L+EKI++LVKEK++E IS LRDESDK GMRIVIE+KR+ + E+VLN LY TQLQ T
Sbjct: 241 KARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEIKRDAVGEVVLNNLYSLTQLQVT 300
Query: 330 FGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTIALTN 389
FG+NM+AL GQPKLLNLK+IL F+ HR+EV+ RRTIFELRKAR+ AHILE L IAL N
Sbjct: 301 FGINMVALSQGQPKLLNLKDILVAFVRHRREVVTRRTIFELRKARDRAHILEALAIALAN 360
Query: 390 IDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTISKINNISKLQNNDMY 449
ID I++IR STP EAK +I S W L +V+ ++ + + +++ Y
Sbjct: 361 IDPIIELIRRASTPAEAKAGLIASPWELGNVASMLERAGDDAARPEWLEAEFGIRDGKYY 420
Query: 450 KLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNI 509
L++ QAQ IL + LQ+LT +E +K++++Y+ ++ + +L IL N R++E+I +EL
Sbjct: 421 -LTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLTLIGELIFILENPDRLMEVIREELVA 479
Query: 510 IKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGG 569
IK +Y ++RR+EI N + + EDLI +D+V+TLS+ GY+K QP+S+Y AQ+RGG
Sbjct: 480 IKEQY----NDLRRTEITANTSDINIEDLINQEDVVVTLSHQGYVKYQPLSDYEAQRRGG 535
Query: 570 RGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFS 629
+GK A K+ED+I++L +ANTHD ILCFS+ GRLYW+KV+Q+P+ SR +RG+PI+N+
Sbjct: 536 KGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYWMKVYQLPEASRGARGRPIVNLLP 595
Query: 630 LKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNED 689
L+ E+IT ILP+ R++ + +VFM+T+ G VKKT L+ FS PR +GIIAVNL+ D
Sbjct: 596 LEPNERITAILPV----REYEEGCHVFMATASGTVKKTALTEFSRPRSAGIIAVNLNEGD 651
Query: 690 FLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNN 749
LIG LTDGS ++MLFS GK VRF E VR+MGR+A GV G+ L +VI+L++
Sbjct: 652 ELIGVDLTDGSNEVMLFSALGKVVRFPEGQVRSMGRTATGVRGINLNGDDRVISLIIPRG 711
Query: 750 QKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLIT 809
+ +LT TENGYGKRT + EY +R T+G+ISIK ++RNGKVV A V +IM+IT
Sbjct: 712 DGE-ILTVTENGYGKRTAVAEYPTKSRATQGVISIKVSERNGKVVGAVQVAPTDQIMMIT 770
Query: 810 TGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
G L+RTRVSE+ +GR+TQGV LI + G+QR+ +
Sbjct: 771 DAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDEHVVGLQRVAE 812
>gi|91227187|ref|ZP_01261646.1| DNA gyrase, subunit A [Vibrio alginolyticus 12G01]
gi|91188715|gb|EAS75003.1| DNA gyrase, subunit A [Vibrio alginolyticus 12G01]
Length = 906
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/880 (52%), Positives = 626/880 (71%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRKAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 SAMLERAGTDAARPEWLEPEYGIRDGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILG 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ +G + RR+EI + + E+
Sbjct: 476 EYKTLLEEIAELMHILASTERLMEVIREELEAVRDGFG----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y +Q+RGG+GK A KDED I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHGGYVKYQVLSDYESQRRGGKGKSATKMKDEDHIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT IL + +F ++ ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILRVD----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL +D LIG +T+G +IMLFS +GK VRF E
Sbjct: 648 ATGDGTVKKTPLNQFANVRSNGLIAVNLREDDSLIGVDITNGENEIMLFSKAGKVVRFKE 707
Query: 718 -------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
VR MGR+A GV GM+L + +V++L+V +++
Sbjct: 708 AEEIPVLDENGKPVLDENGQPEIKFKGVRPMGRTASGVRGMKLAENDQVVSLIVPSHEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E+M+IT G
Sbjct: 767 DILTVTENGYGKRTALSEYPTKGRGTQGVVSIKVSERNGPVVGAIQVVEGDEMMMITDAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV E+ ++GR+TQGV LI + G+QR+ ++
Sbjct: 827 TLVRTRVGEVSQVGRNTQGVTLIRTAEDESVVGLQRIEEV 866
>gi|421557484|ref|ZP_16003389.1| DNA gyrase, A subunit [Neisseria meningitidis 80179]
gi|402335122|gb|EJU70397.1| DNA gyrase, A subunit [Neisseria meningitidis 80179]
Length = 916
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/896 (51%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRVI
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVI 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESPNAVEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++Q++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDQEEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|254291709|ref|ZP_04962496.1| DNA gyrase, subunit A [Vibrio cholerae AM-19226]
gi|150422393|gb|EDN14353.1| DNA gyrase, subunit A [Vibrio cholerae AM-19226]
Length = 894
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYLLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|71732005|gb|EAO34062.1| DNA gyrase, subunit A [Xylella fastidiosa subsp. sandyi Ann-1]
Length = 893
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/883 (51%), Positives = 630/883 (71%), Gaps = 44/883 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDG+KPVHRRVL+AMHE+ +
Sbjct: 1 MAETAKEIIKVNLEDEMRKSYLDYAMSVIVGRALPDARDGMKPVHRRVLYAMHELGAHSD 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR++GE +GKYHPHGD S+YD LVRMAQ FSLR LV+GQGNFGS+DGD AAAM
Sbjct: 61 KSYFKSARIIGEVLGKYHPHGDQSVYDTLVRMAQPFSLRYLLVEGQGNFGSVDGDPAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++IS++L+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTESRMSRISHDLIADIDKETVDFQPNYDEKETEPTVMPTRFPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL E I+ + ++ NPE I+ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLVESINACIALIDNPELDIDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + R AI++ E+PYQVNK L+EKI++LVKEK+++ IS LRDESDK G
Sbjct: 241 RMRAKADIEVAD-NGREAIVVTEIPYQVNKARLIEKIAELVKEKRIDGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QT +++ FG+NM+ALV+G+P+LLNLK+IL FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTHMESVFGINMVALVDGRPQLLNLKQILQAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I +I+++ +PQEAK +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIHLIKTSPSPQEAKERLLAKTWAPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + + L D Y+L+++Q ++IL+M L RLT +EQ K+ +Y+
Sbjct: 420 GTLLSASGGEASRPEDLPQGVGLI-GDSYQLTEVQVRQILEMRLHRLTGLEQDKLAEEYQ 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++ ++ L IL + ++++I DEL I+ +YG ++RR+EI + + DLIA
Sbjct: 479 QLLEIIVGLIRILESPDVLLQVIRDELLKIREEYG----DVRRTEIRHSEEDLDILDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY K QP+S YRAQKRGGRG+ A+ TK+ED+I+ L++ NTHD +L F++
Sbjct: 535 PEDVVVTLSHAGYAKRQPVSAYRAQKRGGRGRAAVTTKEEDFIDHLWLVNTHDTLLTFTS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++WL V+Q+P+ N+RG+PIIN L+ EK+ +LP+ R++ +N+YVF +T
Sbjct: 595 TGKVFWLSVYQLPEAGSNARGRPIINWIPLEPGEKVQAVLPV----REYAENHYVFFATR 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT LS F+ G IA+NL D LIG ALTDG D++LF+ +GK VRF+EN+V
Sbjct: 651 QGTVKKTPLSEFAFRLARGKIAINLDQGDALIGVALTDGERDVLLFASNGKTVRFSENTV 710
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSN----------------------NQKQSV---- 754
R+MGR+A GV G++L + ++V++L+++ N SV
Sbjct: 711 RSMGRTATGVRGIKLTEGEEVVSLIIAEPATGVDMLEEAEETADDDIQTANTADSVHIGP 770
Query: 755 --------LTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
LTATENGYGK T + Y + RGT+G+I I+T +RNG++VAA L+ E++
Sbjct: 771 TQDDILCILTATENGYGKCTPLAHYPRKGRGTQGVIGIQTTERNGRLVAAVLLGATDEVL 830
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
LI+ GG L+RTR SEI ++GR+TQGV LI + N KL V+RL
Sbjct: 831 LISDGGTLVRTRGSEISRVGRNTQGVTLIRLSNGEKLQAVERL 873
>gi|407683984|ref|YP_006799158.1| DNA gyrase subunit A [Alteromonas macleodii str. 'English Channel
673']
gi|407245595|gb|AFT74781.1| DNA gyrase subunit A [Alteromonas macleodii str. 'English Channel
673']
Length = 836
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/841 (53%), Positives = 616/841 (73%), Gaps = 37/841 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N +N
Sbjct: 1 MSDNAKEILPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG E P VLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDFVPNYDGTEHIPEVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G + ++ +P +I+DL+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCVALIQDPSITIDDLMTHIPGPDFPTAAMISGRKGIEDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + + I+++E+PYQVNK L+EKI++LVKEK++E +S LRDESDK G
Sbjct: 241 YLRAKAEIET-DSNGKETIVVNEIPYQVNKARLIEKIAELVKEKRIEGVSALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KRNE E++LN LY TQLQ FG+NM+AL NGQPK+ NLKE L FILHR+E
Sbjct: 300 MRIVIEVKRNESAEVLLNHLYANTQLQTVFGINMVALDNGQPKVFNLKETLECFILHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR+ AHILEGL IAL NID I++I+++ +P +AK ++ W+L DV
Sbjct: 360 VVTRRTVFELRKARDRAHILEGLAIALANIDPIIELIKASQSPADAKKSLVAQGWDLGDV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
++++ G + + + I + Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 AQMLERAGDDAARPDWLMPEFGI----RDGKYYLTEQQAQAILDLRLHKLTGLEHEKILE 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++ + +L IL++ +R++E+I +EL +++++G RR+EI + + ED
Sbjct: 476 EYKQLLEIIAELLHILNSPERLMEVIQEELEKVRDEFGDE----RRTEITAASHDIDIED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K Q +++Y AQ+RGGRGK A KDED+I +L +ANTHD+ILC
Sbjct: 532 LIEQEDVVVTLSREGYVKYQKLTDYEAQRRGGRGKSATKMKDEDFIERLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS GRLYWLKV+Q+P SRN+RG+PI+N+ L+ E+IT ILP+ ++F + +V M
Sbjct: 592 FSTRGRLYWLKVYQLPFASRNARGRPIVNILPLEENERITAILPI----KEFEEGKFVLM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT LS +S PR SGIIAVNL+ D LIG +T G DIMLFSD+GK VRFNE
Sbjct: 648 ATANGTVKKTDLSLYSRPRSSGIIAVNLNEGDELIGVDITHGDDDIMLFSDAGKVVRFNE 707
Query: 718 N--------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTA 757
++R MGR+A GV G+RL+ QKV++L+V +LTA
Sbjct: 708 KLRDSETGEVKRDPETGEELLALRPMGRTATGVRGIRLQDGQKVVSLIVPKGDG-PILTA 766
Query: 758 TENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817
TENG+GKRT +++Y +R T+G++SIK ++RNGKVV A V+ +EIMLI+ G L+RT
Sbjct: 767 TENGFGKRTPLEDYPAKSRATQGVVSIKVSERNGKVVGAVQVDETNEIMLISDQGTLVRT 826
Query: 818 R 818
R
Sbjct: 827 R 827
>gi|153801315|ref|ZP_01955901.1| DNA gyrase, subunit A [Vibrio cholerae MZO-3]
gi|229529662|ref|ZP_04419052.1| DNA gyrase subunit A [Vibrio cholerae 12129(1)]
gi|419829827|ref|ZP_14353313.1| DNA gyrase, A subunit [Vibrio cholerae HC-1A2]
gi|419832800|ref|ZP_14356262.1| DNA gyrase, A subunit [Vibrio cholerae HC-61A2]
gi|421351024|ref|ZP_15801389.1| DNA gyrase, A subunit [Vibrio cholerae HE-25]
gi|422917014|ref|ZP_16951342.1| DNA gyrase, A subunit [Vibrio cholerae HC-02A1]
gi|423819686|ref|ZP_17715944.1| DNA gyrase, A subunit [Vibrio cholerae HC-55C2]
gi|423853018|ref|ZP_17719736.1| DNA gyrase, A subunit [Vibrio cholerae HC-59A1]
gi|423880443|ref|ZP_17723339.1| DNA gyrase, A subunit [Vibrio cholerae HC-60A1]
gi|423997430|ref|ZP_17740689.1| DNA gyrase, A subunit [Vibrio cholerae HC-02C1]
gi|424016138|ref|ZP_17755979.1| DNA gyrase, A subunit [Vibrio cholerae HC-55B2]
gi|424019076|ref|ZP_17758872.1| DNA gyrase, A subunit [Vibrio cholerae HC-59B1]
gi|424624620|ref|ZP_18063092.1| DNA gyrase, A subunit [Vibrio cholerae HC-50A1]
gi|424633151|ref|ZP_18071261.1| DNA gyrase, A subunit [Vibrio cholerae HC-52A1]
gi|424636240|ref|ZP_18074255.1| DNA gyrase, A subunit [Vibrio cholerae HC-55A1]
gi|424640179|ref|ZP_18078069.1| DNA gyrase, A subunit [Vibrio cholerae HC-56A1]
gi|424648214|ref|ZP_18085884.1| DNA gyrase, A subunit [Vibrio cholerae HC-57A1]
gi|429885542|ref|ZP_19367127.1| DNA gyrase subunit A [Vibrio cholerae PS15]
gi|443527038|ref|ZP_21093104.1| DNA gyrase, A subunit [Vibrio cholerae HC-78A1]
gi|124123140|gb|EAY41883.1| DNA gyrase, subunit A [Vibrio cholerae MZO-3]
gi|229333436|gb|EEN98922.1| DNA gyrase subunit A [Vibrio cholerae 12129(1)]
gi|341638407|gb|EGS63054.1| DNA gyrase, A subunit [Vibrio cholerae HC-02A1]
gi|395951469|gb|EJH62083.1| DNA gyrase, A subunit [Vibrio cholerae HE-25]
gi|408014229|gb|EKG51891.1| DNA gyrase, A subunit [Vibrio cholerae HC-50A1]
gi|408019881|gb|EKG57254.1| DNA gyrase, A subunit [Vibrio cholerae HC-52A1]
gi|408025051|gb|EKG62121.1| DNA gyrase, A subunit [Vibrio cholerae HC-56A1]
gi|408025626|gb|EKG62676.1| DNA gyrase, A subunit [Vibrio cholerae HC-55A1]
gi|408034784|gb|EKG71269.1| DNA gyrase, A subunit [Vibrio cholerae HC-57A1]
gi|408621412|gb|EKK94415.1| DNA gyrase, A subunit [Vibrio cholerae HC-1A2]
gi|408635778|gb|EKL07960.1| DNA gyrase, A subunit [Vibrio cholerae HC-55C2]
gi|408642780|gb|EKL14524.1| DNA gyrase, A subunit [Vibrio cholerae HC-60A1]
gi|408643288|gb|EKL15018.1| DNA gyrase, A subunit [Vibrio cholerae HC-59A1]
gi|408651444|gb|EKL22700.1| DNA gyrase, A subunit [Vibrio cholerae HC-61A2]
gi|408853526|gb|EKL93316.1| DNA gyrase, A subunit [Vibrio cholerae HC-02C1]
gi|408861163|gb|EKM00762.1| DNA gyrase, A subunit [Vibrio cholerae HC-55B2]
gi|408868790|gb|EKM08104.1| DNA gyrase, A subunit [Vibrio cholerae HC-59B1]
gi|429227659|gb|EKY33648.1| DNA gyrase subunit A [Vibrio cholerae PS15]
gi|443454614|gb|ELT18415.1| DNA gyrase, A subunit [Vibrio cholerae HC-78A1]
Length = 894
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|229521371|ref|ZP_04410790.1| DNA gyrase subunit A [Vibrio cholerae TM 11079-80]
gi|229341469|gb|EEO06472.1| DNA gyrase subunit A [Vibrio cholerae TM 11079-80]
Length = 895
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|90021793|ref|YP_527620.1| DNA gyrase subunit A [Saccharophagus degradans 2-40]
gi|89951393|gb|ABD81408.1| DNA gyrase subunit A [Saccharophagus degradans 2-40]
Length = 886
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/849 (53%), Positives = 618/849 (72%), Gaps = 9/849 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE++ + +E+E+ KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM E+NN WN
Sbjct: 1 MGDIAKEILPVTIEDELKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KIS+ELL DLDKET+DF+ NYDG E P+VLPTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMAKISHELLADLDKETVDFVPNYDGTELIPAVLPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI G L ++ NPE +I++L++ IP PDFPT II G + + Y TG+GR+
Sbjct: 181 NIPPHNLREVIKGCLALIDNPEITIDELMEHIPGPDFPTGAIINGRAGILQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R I+I+E+PYQVNK L+EKI++LVKEKK+E IS +RDESDK G
Sbjct: 241 YVRAQAEVETNEKTGRETIVINEIPYQVNKARLIEKIAELVKEKKIEGISEIRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+V+E+KR E+ E+VLN LY QTQLQN FG+N++ALV+ QPKLLNLKE+L YF+ HR+E
Sbjct: 301 LRVVVEIKRGEMGEVVLNNLYAQTQLQNVFGINIVALVDDQPKLLNLKELLEYFVKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE H+LEG +A+ NID I +I+S+ TP +A++ ++ W + V
Sbjct: 361 VVTRRTVYLLRKARERGHVLEGQAVAIANIDEVITLIKSSPTPADARDAMLARGWPVGAV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S+ + +N + L+ + Y LS +Q Q IL + L RLT ME K++ +YE
Sbjct: 421 SEFLDRAGENACRPDGLPEEFGLREDGSYYLSPVQVQAILDLRLHRLTGMEHDKLLAEYE 480
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+ ++ +IL N +R++ +I +EL +I N YG RR+ I + + + EDLI+
Sbjct: 481 EKLIQIAGYLEILGNPERLMNVIREELEVIYNDYGDE----RRTVIQQSMTDLTHEDLIS 536
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+T+S+ GY KSQP+ Y+AQ+RGG GK A KDED++ L IANTHDY+LCF++
Sbjct: 537 EEDRVVTISHGGYAKSQPLDAYQAQRRGGMGKAATSVKDEDFVEHLLIANTHDYLLCFTS 596
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++WLKV+QIP R SRG+P++N+ L+ E+IT ILP+ R+F ++++FM+T+
Sbjct: 597 VGKVFWLKVYQIPVAGRQSRGRPVVNLLPLEEGERITSILPV----REFDDDHFIFMATA 652
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT LS F+ PR G+ A++L D L+G A+TDG+ DI+L + +GKA RF+E +V
Sbjct: 653 DGTVKKTPLSQFARPRSVGLRAIDLVEGDHLVGTAITDGTKDIILLTSAGKAARFSEENV 712
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR +RGV G+R+ VIA++V + VLT +ENG+GKRT + EY RG++G
Sbjct: 713 RSMGRVSRGVRGVRMADDVSVIAMVVP-EEGGKVLTVSENGFGKRTEVTEYPAKGRGSQG 771
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+++ ++RNG +V AT V EIMLI+ G L+RTR E+ GR+TQGV LI V+
Sbjct: 772 VIAMQMSERNGCLVGATQVFEGDEIMLISNQGTLVRTRADEVSLSGRNTQGVRLIRVKEG 831
Query: 841 SKLCGVQRL 849
+ G++R+
Sbjct: 832 EHIVGLERI 840
>gi|404401719|ref|ZP_10993303.1| DNA gyrase subunit A [Pseudomonas fuscovaginae UPB0736]
Length = 932
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/893 (49%), Positives = 633/893 (70%), Gaps = 50/893 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQFIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + ++ L++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 421 VMTMVERAGADSCRPENLDPQYGLRDGK-YFLSPEQAQAILELRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ +L IL++S R++E+I +EL +I+ +YG + RR+EI+ ++ + D+I
Sbjct: 480 QEILNQIGELIRILNSSTRLMEVIREELEVIRAEYG----DARRTEILDARLDLTLGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I+ L +AN+H +L FS
Sbjct: 536 PEEERVVTISHSGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYISHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL----------------- 642
+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +L +
Sbjct: 596 SKGKVYWLKTYEIPEASRAARGRPLVNLLPLDEGEYITTMLQIDLEALQQSAGADDELDD 655
Query: 643 ------------SNNKRDF--------------PKNNYVFMSTSLGIVKKTLLSNFSNPR 676
++ D P Y+FM+T+ G VKKT L+ FS PR
Sbjct: 656 ADDSVIEGEVIEADEAVDSAEEVEGDTPELVAEPTGAYIFMATAFGTVKKTPLAQFSRPR 715
Query: 677 KSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLE 736
SG+IA+ L D LI AA+TDG+ ++MLFS++GK +RF E+ VR MGR ARG+ GMR+
Sbjct: 716 TSGLIALKLKEGDTLIAAAITDGAKEVMLFSNAGKVIRFAESVVREMGRGARGIRGMRIG 775
Query: 737 KKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAA 796
K QK+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG+++ A
Sbjct: 776 KGQKLISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTKDRNGQLIGA 834
Query: 797 TLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
V EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 IQVQEGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLVTDETLVGLERV 887
>gi|451972622|ref|ZP_21925827.1| DNA gyrase subunit A [Vibrio alginolyticus E0666]
gi|451931438|gb|EMD79127.1| DNA gyrase subunit A [Vibrio alginolyticus E0666]
Length = 906
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/880 (52%), Positives = 626/880 (71%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRKAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 SAMLERAGTDAARPEWLEPQYGIRDGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILG 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ +G + RR+EI + + E+
Sbjct: 476 EYKTLLEEIAELMHILASTERLMEVIREELEAVRDGFG----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y +Q+RGG+GK A KDED I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHGGYVKYQVLSDYESQRRGGKGKSATKMKDEDHIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT IL + +F ++ ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILRVD----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL +D LIG +T+G +IMLFS +GK VRF E
Sbjct: 648 ATGDGTVKKTPLNQFANVRSNGLIAVNLREDDSLIGVDITNGENEIMLFSKAGKVVRFKE 707
Query: 718 -------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
VR MGR+A GV GM+L + +V++L+V +++
Sbjct: 708 AEEIPVLDENGKPVLDENGQPEIKFKGVRPMGRTASGVRGMKLAENDQVVSLIVPSHEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E+M+IT G
Sbjct: 767 DILTVTENGYGKRTALSEYPTKGRGTQGVVSIKVSERNGPVVGAIQVVEGDEMMMITDAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV E+ ++GR+TQGV LI + G+QR+ ++
Sbjct: 827 TLVRTRVGEVSQVGRNTQGVTLIRTAEDESVVGLQRIEEV 866
>gi|350425850|ref|XP_003494252.1| PREDICTED: DNA gyrase subunit A-like [Bombus impatiens]
Length = 843
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/856 (53%), Positives = 614/856 (71%), Gaps = 46/856 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKE+ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MTDLAKEITPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDS AAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+KET+DF NYDG E P VLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMSKIAHELLADLEKETVDFSPNYDGTELIPDVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + + SI L++ +P PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLNEVINGCLAYMDDENISIEGLMQHVPGPDFPTAAMISGRKGIEDAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R++ IE + +R II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YVRSRADIEVDEKTHRETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPKLLNLK++L F+ HR+E
Sbjct: 301 MRIVIEVKRDAVAEVVLNNLYSQTQLQISFGINMVALHHGQPKLLNLKDMLKAFVTHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++I+ A+ + ++ + + D
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIQKAGN-DAARPEDLDPEFGVRD- 418
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ Y LS+ QAQ IL + LQ+LT +E +KII++Y+
Sbjct: 419 --------------------------NHYFLSEAQAQAILDLRLQKLTGLEHEKIIDEYK 452
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ L IL N R++E+I +EL I+ +Y ++ RR+EI ++ + + EDLIA
Sbjct: 453 LLLDQISALLYILQNPNRLMEVIREELEEIRAQY----QDPRRTEITASSADINIEDLIA 508
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+
Sbjct: 509 QEDVVVTLSHQGYVKYQPVTDYEAQRRGGKGKSAARIKEEDFIEKLLVANTHDTILCFSS 568
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GRLYWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ ++F +YVFM+T+
Sbjct: 569 RGRLYWLKVYQLPEASRGARGRPIINILPLEANERITAILPV----KEFDDQHYVFMATA 624
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT LS FS PR GIIA+NL + D LIG LTDG+ +IMLFS SGK VRF E
Sbjct: 625 SGTVKKTALSEFSRPRAGGIIAINLRDGDELIGVDLTDGTNEIMLFSASGKVVRFREEEE 684
Query: 719 -------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEY 771
VRA+GR+A GV G++L +V++L++ ++LT T+NGYGKRT EY
Sbjct: 685 LEDGTIKGVRAVGRTAAGVRGIKLSDDDQVVSLIIPRGDG-AILTVTQNGYGKRTAQDEY 743
Query: 772 TKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQG 831
+R T+G+ISIK ++RNG+V+ A V+ +IMLIT G L+RTRVSE+ +GR+TQG
Sbjct: 744 PTKSRATQGVISIKVSERNGRVIGAVQVDDNDQIMLITDAGTLVRTRVSEVSIIGRNTQG 803
Query: 832 VILITVENKSKLCGVQ 847
V LI + K+ G+Q
Sbjct: 804 VTLIRTADDEKVVGLQ 819
>gi|261380731|ref|ZP_05985304.1| DNA gyrase, A subunit [Neisseria subflava NJ9703]
gi|284796448|gb|EFC51795.1| DNA gyrase, A subunit [Neisseria subflava NJ9703]
Length = 923
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/889 (52%), Positives = 628/889 (70%), Gaps = 52/889 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMEKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + I+ L +L PE I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLGDTINACLRLLDEPETEIDELINIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKMTQLQDSFGINMVALVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESANAPEAKEKLLSRPWRSSLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + + L ++ Y LS++QA IL+M L+ LT ++Q++I+ +Y
Sbjct: 430 EDMLSRTDLDLHMMRPEGLPENLGLHSQGYYLSELQADAILRMSLRNLTGLDQEEIVGEY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DILS +R+ +II +EL IK +G RRSEI + + EDLI
Sbjct: 490 KNLMSKIIDFVDILSKPERVTQIIREELADIKANFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN--- 716
+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFN
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYW 721
Query: 717 -------------------------ENSVRAMGRSARGV----------IGMRLEKKQKV 741
EN+ A+ GV GMRL K+
Sbjct: 722 EKSGNDEAEDADIETENEDSDGLDDENAENALPSGKHGVRPSGRGSGGLRGMRLPAYGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + +QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAEQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
LV+ ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L +
Sbjct: 842 LVSETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGETLVSL 890
>gi|153827297|ref|ZP_01979964.1| DNA gyrase, subunit A [Vibrio cholerae MZO-2]
gi|149738788|gb|EDM53130.1| DNA gyrase, subunit A [Vibrio cholerae MZO-2]
Length = 894
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNESITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|262393882|ref|YP_003285736.1| DNA gyrase subunit A [Vibrio sp. Ex25]
gi|262337476|gb|ACY51271.1| DNA gyrase subunit A [Vibrio sp. Ex25]
Length = 906
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/880 (52%), Positives = 626/880 (71%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++N E +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKADI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQP+L NLK++L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRKAPTPAEAKAGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ G + + I Q Y L++ QAQ IL + L +LT +E +KI+
Sbjct: 420 SAMLERAGTDAARPEWLEPEYGIRDGQ----YFLTEQQAQAILDLRLHKLTGLEHEKILG 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ +G + RR+EI + + E+
Sbjct: 476 EYKTLLEEIAELMHILASTERLMEVIREELEAVRDGFG----DARRTEITAASHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y +Q+RGG+GK A KDED I +L +ANTHD ILC
Sbjct: 532 LIAREDVVVTLSHGGYVKYQVLSDYESQRRGGKGKSATKMKDEDHIERLLVANTHDNILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT IL + +F ++ ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILRVD----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L+ F+N R +G+IAVNL +D LIG +T+G +IMLFS +GK VRF E
Sbjct: 648 ATGDGTVKKTPLNQFANVRSNGLIAVNLREDDSLIGVDITNGENEIMLFSKAGKVVRFKE 707
Query: 718 -------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
VR MGR+A GV GM+L + +V++L+V +++
Sbjct: 708 AEEIPVLDENGKPVLDENGQPEIKFKGVRPMGRTASGVRGMKLAENDQVVSLIVPSHEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E+M+IT G
Sbjct: 767 DILTVTENGYGKRTALSEYPTKGRGTQGVVSIKVSERNGPVVGAIQVVEGDEMMMITDAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV E+ ++GR+TQGV LI + G+QR+ ++
Sbjct: 827 TLVRTRVGEVSQVGRNTQGVTLIRTAEDESVVGLQRIEEV 866
>gi|268601544|ref|ZP_06135711.1| DNA gyrase subunit A [Neisseria gonorrhoeae PID18]
gi|268585675|gb|EEZ50351.1| DNA gyrase subunit A [Neisseria gonorrhoeae PID18]
Length = 916
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/896 (52%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L P+ I++LI II APDFPT IYGL V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPKTEIDELIDIIQAPDFPTGATIYGLGGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAVEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++QK+II
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKKQG--YYLSEIQADAILRMSLRNLTGLDQKEIIE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
N VR GR + G+ GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDDLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|225075864|ref|ZP_03719063.1| hypothetical protein NEIFLAOT_00887 [Neisseria flavescens
NRL30031/H210]
gi|224952810|gb|EEG34019.1| hypothetical protein NEIFLAOT_00887 [Neisseria flavescens
NRL30031/H210]
Length = 923
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/889 (52%), Positives = 628/889 (70%), Gaps = 52/889 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMEKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + I+ L +L +PE I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLGDTINACLRLLDDPETEIDELINIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R THIE + R AI+IDE+PYQVNK L+EKI +LV+EK LE IS+LRDESDKSG
Sbjct: 250 MRGTTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGISDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKMTQLQDSFGINMVALVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESANAPEAKEKLLSRPWRSSLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + + L ++ Y LS++QA IL+M L+ LT ++Q++I+ +Y
Sbjct: 430 EDMLSRTDLDLHMMRPEGLPENLGLHSQGYYLSELQADAILRMSLRNLTGLDQEEIVGEY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DILS +R+ +II +EL IK +G RRSEI + + EDLI
Sbjct: 490 KNLMSKIIDFVDILSKPERVTQIIREELADIKANFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN--- 716
+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFN
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAITLKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYW 721
Query: 717 -------------------------ENSVRAMGRSARGV----------IGMRLEKKQKV 741
EN+ A+ GV GMRL K+
Sbjct: 722 EKSGNDEAEDADIETENEDSDGLDDENAENALPSGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + +QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAEQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
LV+ ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L +
Sbjct: 842 LVSETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGETLVSL 890
>gi|400405099|ref|YP_006587958.1| DNA gyrase subunit A [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|400363462|gb|AFP84530.1| DNA gyrase, A subunit [secondary endosymbiont of Ctenarytaina
eucalypti]
Length = 858
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/853 (53%), Positives = 622/853 (72%), Gaps = 14/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ +E+ + +EEE+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM + N WN
Sbjct: 1 MSDLRREITPVNIEEELKRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGDV++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARLVGDVIGKYHPHGDVAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL+DL+KET+D + NYDG EK P V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLMDLEKETVDCVLNYDGTEKIPDVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + + SI DL+K IP PDFPTA II+G + D Y TG+G++
Sbjct: 181 NIPPHNLAEVIDGCLAYIDDENISIEDLMKHIPGPDFPTAAIIHGRHGIEDAYRTGRGKL 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E ++ R II+ E+PYQVNK L+EKI++LVKE+++E I+ LRDESDK G
Sbjct: 241 YIRARADVEVSDKSARETIIVREIPYQVNKARLVEKIAELVKERRVEGINGLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ I +VLN LY TQLQ +FG+NM+AL +GQPK+L LK+IL F+ HR+E
Sbjct: 301 MRIVIEIKRDAIGAVVLNNLYSLTQLQVSFGINMVALHHGQPKVLPLKKILSAFVHHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELR+AR+ AH+LE L +AL NID I +IR P +AK +++ S+W L V
Sbjct: 361 VVTRRTVFELRQARDRAHMLEALAVALVNIDQIIYLIRKAPRPLDAKAELMSSSWVLGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S I+ + + NT ++ + + Y L++ Q IL + LQ+LT++EQKK++++
Sbjct: 421 SAIL---EPDGNTAARPEWLGPQYGVRDGQYYLTEQQVLAILDLRLQKLTSLEQKKLLDE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ ++ ++ +L IL + R++ +I EL IK +Y + RR+EI N + EDL
Sbjct: 478 YQVLLTEITELVRILHSPDRLMAVIRAELQTIKEEY----HDARRTEITANTSEINIEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D+V+TLS+ GY+K QP++EY AQ+RGG+GK A K+ED+I++L +AN+H IL F
Sbjct: 534 INQEDVVVTLSHQGYVKYQPLTEYEAQRRGGKGKSAASIKEEDFISRLLVANSHQTILLF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YW+KV+Q+P+ SR SRG+PI+N+ L++ E+IT ILP+S ++ +VFM+
Sbjct: 594 SSRGRMYWMKVYQLPEASRGSRGRPIVNLLPLESNERITAILPVS----EYEDGCHVFMA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L FS R +GIIAV L++ D LIG LT+GS ++MLFS GK VRF EN
Sbjct: 650 TASGTVKKTSLIEFSRRRSAGIIAVKLNDGDELIGVDLTNGSNEVMLFSAYGKVVRFPEN 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR+MGR+A GV G+ L K +V++L+V + S+LT T++GYGKRT EY +R T
Sbjct: 710 QVRSMGRTATGVRGISLAKGDRVVSLIVPHGNG-SLLTVTQHGYGKRTAEVEYPTRSRAT 768
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+ISIK +KRNG VV A VN +IM+IT G L+R RVSE+ +GR+TQGV LI
Sbjct: 769 QGVISIKVSKRNGGVVGAVQVNDCDQIMMITDAGTLVRMRVSEVSIVGRNTQGVTLIRAP 828
Query: 839 NKSKLCGVQRLCK 851
+ G+QR+ +
Sbjct: 829 KDESVVGLQRVVE 841
>gi|258620208|ref|ZP_05715247.1| DNA gyrase, subunit A [Vibrio mimicus VM573]
gi|262171718|ref|ZP_06039396.1| DNA gyrase subunit A [Vibrio mimicus MB-451]
gi|258587566|gb|EEW12276.1| DNA gyrase, subunit A [Vibrio mimicus VM573]
gi|261892794|gb|EEY38780.1| DNA gyrase subunit A [Vibrio mimicus MB-451]
Length = 893
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRHAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKAEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|422910049|ref|ZP_16944691.1| DNA gyrase, A subunit [Vibrio cholerae HE-09]
gi|341633961|gb|EGS58737.1| DNA gyrase, A subunit [Vibrio cholerae HE-09]
Length = 894
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 620/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE + + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-EKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|422922571|ref|ZP_16955754.1| DNA gyrase, A subunit [Vibrio cholerae BJG-01]
gi|341645716|gb|EGS69844.1| DNA gyrase, A subunit [Vibrio cholerae BJG-01]
Length = 894
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLING+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNESITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|424590492|ref|ZP_18029929.1| DNA gyrase, A subunit [Vibrio cholerae CP1037(10)]
gi|408034584|gb|EKG71077.1| DNA gyrase, A subunit [Vibrio cholerae CP1037(10)]
Length = 894
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNESITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRHAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKAEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|385335883|ref|YP_005889830.1| DNA gyrase subunit A [Neisseria gonorrhoeae TCDC-NG08107]
gi|317164426|gb|ADV07967.1| DNA gyrase subunit A [Neisseria gonorrhoeae TCDC-NG08107]
Length = 916
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/896 (52%), Positives = 627/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++Y+ +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDFAVYNTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L P+ I++LI II APDFPT IYGL V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPKTEIDELIDIIQAPDFPTGATIYGLGGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++QK+II
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKKQG--YYLSEIQADAILRMSLRNLTGLDQKEIIE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
N VR GR + G+ GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDDLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|258624431|ref|ZP_05719378.1| DNA gyrase, subunit A [Vibrio mimicus VM603]
gi|262165509|ref|ZP_06033246.1| DNA gyrase subunit A [Vibrio mimicus VM223]
gi|258583278|gb|EEW08080.1| DNA gyrase, subunit A [Vibrio mimicus VM603]
gi|262025225|gb|EEY43893.1| DNA gyrase subunit A [Vibrio mimicus VM223]
Length = 894
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRHAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRSNGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKAEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|15641271|ref|NP_230903.1| DNA gyrase subunit A [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121590733|ref|ZP_01678064.1| DNA gyrase, subunit A [Vibrio cholerae 2740-80]
gi|121729795|ref|ZP_01682231.1| DNA gyrase, subunit A [Vibrio cholerae V52]
gi|147673690|ref|YP_001216823.1| DNA gyrase subunit A [Vibrio cholerae O395]
gi|227081430|ref|YP_002809981.1| DNA gyrase subunit A [Vibrio cholerae M66-2]
gi|227117725|ref|YP_002819621.1| DNA gyrase, subunit A [Vibrio cholerae O395]
gi|229505155|ref|ZP_04394665.1| DNA gyrase subunit A [Vibrio cholerae BX 330286]
gi|229518292|ref|ZP_04407736.1| DNA gyrase subunit A [Vibrio cholerae RC9]
gi|229525857|ref|ZP_04415262.1| DNA gyrase subunit A [Vibrio cholerae bv. albensis VL426]
gi|229608175|ref|YP_002878823.1| DNA gyrase subunit A [Vibrio cholerae MJ-1236]
gi|254848382|ref|ZP_05237732.1| DNA gyrase [Vibrio cholerae MO10]
gi|262159069|ref|ZP_06030181.1| DNA gyrase subunit A [Vibrio cholerae INDRE 91/1]
gi|262169427|ref|ZP_06037119.1| DNA gyrase subunit A [Vibrio cholerae RC27]
gi|379741068|ref|YP_005333037.1| DNA gyrase subunit A [Vibrio cholerae IEC224]
gi|419825749|ref|ZP_14349253.1| DNA gyrase, A subunit [Vibrio cholerae CP1033(6)]
gi|421316247|ref|ZP_15766818.1| DNA gyrase, A subunit [Vibrio cholerae CP1032(5)]
gi|421331546|ref|ZP_15782026.1| DNA gyrase, A subunit [Vibrio cholerae CP1046(19)]
gi|424586139|ref|ZP_18025729.1| DNA gyrase, A subunit [Vibrio cholerae CP1030(3)]
gi|424598705|ref|ZP_18037899.1| DNA gyrase, A subunit [Vibrio Cholerae CP1044(17)]
gi|440709520|ref|ZP_20890177.1| DNA gyrase subunit A [Vibrio cholerae 4260B]
gi|449056250|ref|ZP_21734918.1| DNA gyrase subunit A [Vibrio cholerae O1 str. Inaba G4222]
gi|9655742|gb|AAF94417.1| DNA gyrase, subunit A [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547414|gb|EAX57525.1| DNA gyrase, subunit A [Vibrio cholerae 2740-80]
gi|121628470|gb|EAX60960.1| DNA gyrase, subunit A [Vibrio cholerae V52]
gi|146315573|gb|ABQ20112.1| DNA gyrase, subunit A [Vibrio cholerae O395]
gi|227009318|gb|ACP05530.1| DNA gyrase, subunit A [Vibrio cholerae M66-2]
gi|227013175|gb|ACP09385.1| DNA gyrase, subunit A [Vibrio cholerae O395]
gi|229339438|gb|EEO04455.1| DNA gyrase subunit A [Vibrio cholerae bv. albensis VL426]
gi|229345007|gb|EEO09981.1| DNA gyrase subunit A [Vibrio cholerae RC9]
gi|229357378|gb|EEO22295.1| DNA gyrase subunit A [Vibrio cholerae BX 330286]
gi|229370830|gb|ACQ61253.1| DNA gyrase subunit A [Vibrio cholerae MJ-1236]
gi|254844087|gb|EET22501.1| DNA gyrase [Vibrio cholerae MO10]
gi|262022240|gb|EEY40949.1| DNA gyrase subunit A [Vibrio cholerae RC27]
gi|262029254|gb|EEY47906.1| DNA gyrase subunit A [Vibrio cholerae INDRE 91/1]
gi|378794578|gb|AFC58049.1| DNA gyrase subunit A [Vibrio cholerae IEC224]
gi|395921204|gb|EJH32024.1| DNA gyrase, A subunit [Vibrio cholerae CP1032(5)]
gi|395932810|gb|EJH43553.1| DNA gyrase, A subunit [Vibrio cholerae CP1046(19)]
gi|395976093|gb|EJH85556.1| DNA gyrase, A subunit [Vibrio cholerae CP1030(3)]
gi|408043686|gb|EKG79670.1| DNA gyrase, A subunit [Vibrio Cholerae CP1044(17)]
gi|408609830|gb|EKK83206.1| DNA gyrase, A subunit [Vibrio cholerae CP1033(6)]
gi|439975109|gb|ELP51245.1| DNA gyrase subunit A [Vibrio cholerae 4260B]
gi|448264073|gb|EMB01312.1| DNA gyrase subunit A [Vibrio cholerae O1 str. Inaba G4222]
Length = 894
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLING+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|326424122|ref|NP_761835.2| DNA gyrase subunit A [Vibrio vulnificus CMCP6]
gi|319999505|gb|AAO11362.2| DNA gyrase, A subunit [Vibrio vulnificus CMCP6]
Length = 903
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/880 (52%), Positives = 628/880 (71%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++N +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAYINNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILE L +AL NID I++IR+ +TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELKKARDRAHILEALALALANIDEIIELIRNAATPAEAKAGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLESAGTDAARPDWLEPQYGIRDGQ----YFLTETQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I +EL ++++ +G ++RR+EI + + E+
Sbjct: 476 EYKALLDEIKELMHILASTERLMEVIREELEMVRDAFG----DVRRTEITAASHDIDLEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNLLPLEESERITAILPVT----EFSADKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L FSN R +G+IAVNL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFSNVRANGLIAVNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 -------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
VR MGR+A GV GM+L +V++L+V N
Sbjct: 708 AEESPVLDENGNPALDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKNDG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT++ EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTVLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVEDGDEFMMITDAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ ++
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTAEDESVVGLQRIDEV 866
>gi|194098847|ref|YP_002001910.1| DNA gyrase subunit A [Neisseria gonorrhoeae NCCP11945]
gi|193934137|gb|ACF29961.1| DNA gyrase subunit A [Neisseria gonorrhoeae NCCP11945]
Length = 916
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/896 (52%), Positives = 626/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++Y +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDFAVYGTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L P+ I++LI II APDFPT IYGL V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPKTEIDELIDIIQAPDFPTGATIYGLGGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIKLIKESPNAAEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT ++QK+II
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKKQG--YYLSEIQADAILRMSLRNLTGLDQKEIIE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
N VR GR + G+ GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDDLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|398985776|ref|ZP_10691242.1| DNA gyrase, A subunit [Pseudomonas sp. GM24]
gi|399011096|ref|ZP_10713429.1| DNA gyrase, A subunit [Pseudomonas sp. GM16]
gi|398118434|gb|EJM08165.1| DNA gyrase, A subunit [Pseudomonas sp. GM16]
gi|398153700|gb|EJM42196.1| DNA gyrase, A subunit [Pseudomonas sp. GM24]
Length = 924
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/888 (50%), Positives = 629/888 (70%), Gaps = 47/888 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N +N
Sbjct: 1 MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTA II G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKKLE I+ LRDESDK
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMR+VIEL+R E+PE++LN LY QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPW---E 417
Query: 420 VSKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S ++ ++ + N+ Y LS QAQ IL++ L RLT +E +K++
Sbjct: 418 SSAVVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLA 477
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL+++ R++E+I +EL +I+ +YG RR+EI+ ++ + D
Sbjct: 478 EYQEILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDQ----RRTEILDARLDLTLGD 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
+I ++ V+T+S+ GY K+QP++ Y+AQ+RGG+GK A KDED+I L +AN+H +L
Sbjct: 534 MIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILP--LSNNKR-------- 647
FS+ G++YWLK ++IP+ SR +RG+P++N+ L E IT +LP L KR
Sbjct: 594 FSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMKRQADEEEAE 653
Query: 648 --------------------------DFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGII 681
D K ++FMST+ G VKKT L FS R G+I
Sbjct: 654 GVEADVEEIENSNETDEERRARIKAADRKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLI 713
Query: 682 AVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKV 741
A+ L D LI AA+TDG +IMLFSD GK RF E+ VRAMGR+ARGV GMRL + QK+
Sbjct: 714 ALELDEGDILISAAITDGEQEIMLFSDGGKVTRFKESEVRAMGRTARGVRGMRLPEGQKL 773
Query: 742 IALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNR 801
I++L+ + +LTA+E GYGKRT I E+ ++ RG +G+I++ +N+RNG++V A V
Sbjct: 774 ISMLIP-EEGSEILTASERGYGKRTAITEFPEYKRGGQGVIAMVSNERNGRLVGAVQVQD 832
Query: 802 YHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 833 GEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDETLVGLERV 880
>gi|241760567|ref|ZP_04758660.1| DNA gyrase, A subunit [Neisseria flavescens SK114]
gi|241319071|gb|EER55573.1| DNA gyrase, A subunit [Neisseria flavescens SK114]
Length = 923
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/889 (52%), Positives = 628/889 (70%), Gaps = 52/889 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD+++YD +VRMAQ FS+R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDIAVYDTIVRMAQDFSMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMEKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + I+ L +L PE I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLGDTINACLRLLDEPETEIDELINIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AI+IDE+PYQVNK L+EKI +LV+EK LE +S+LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGVSDLRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ ++ EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESANAPEAKEKLLSRPWRSSLV 429
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + + + L ++ Y LS++QA IL+M L+ LT ++Q++I+ +Y
Sbjct: 430 EDMLSRTDLDLHMMRPEGLPENLGLHSQGYYLSELQADAILRMSLRNLTGLDQEEIVGEY 489
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+N++ K+ID DILS +R+ +II +EL IK +G RRSEI + + EDLI
Sbjct: 490 KNLMSKIIDFVDILSKPERVTQIIREELADIKANFGDE----RRSEINPFGGDIADEDLI 545
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 546 PQREMVVTLTHGGYIKIQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 605
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF +T
Sbjct: 606 NLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFFAT 661
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN--- 716
+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFN
Sbjct: 662 AQGMVKKVQLSAFKNVRSQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYW 721
Query: 717 -------------------------ENSVRAMGRSARGV----------IGMRLEKKQKV 741
EN+ A+ GV GMRL K+
Sbjct: 722 EKSGNDEAEDADIETENEDSDGLDDENAENALPSGKHGVRPSGRGSGGLRGMRLPADGKI 781
Query: 742 IALLV-SNNQKQS---VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++L+ + +QS VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VAAT
Sbjct: 782 VSLITFAPEAEQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAAT 841
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
LV+ ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L +
Sbjct: 842 LVSETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGETLVSL 890
>gi|449145203|ref|ZP_21776012.1| DNA gyrase, subunit A [Vibrio mimicus CAIM 602]
gi|449079239|gb|EMB50164.1| DNA gyrase, subunit A [Vibrio mimicus CAIM 602]
Length = 894
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/877 (52%), Positives = 621/877 (70%), Gaps = 36/877 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLING+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRHAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ Y L++ QAQ IL + L +LT +E +KI+++Y+
Sbjct: 420 AAMLERAGTDVARPEWLEPQYGIRDGK-YFLTEQQAQAILDLRLHKLTGLEHEKILDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ L IL++++R++E+I +EL I+ + + RR+EI + E+LIA
Sbjct: 479 QLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEELIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL FS
Sbjct: 535 REDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFST 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM+T
Sbjct: 595 RGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFMATG 650
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-- 718
G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E+
Sbjct: 651 DGTVKKTSLDQFANVRSNGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEE 710
Query: 719 -----------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVL 755
VR MGR+A GV GM+L +V++L+V + VL
Sbjct: 711 TAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKAEG-DVL 769
Query: 756 TATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILI 815
T TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G L+
Sbjct: 770 TVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLV 829
Query: 816 RTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 830 RTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|229511173|ref|ZP_04400652.1| DNA gyrase subunit A [Vibrio cholerae B33]
gi|229351138|gb|EEO16079.1| DNA gyrase subunit A [Vibrio cholerae B33]
Length = 894
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/880 (52%), Positives = 621/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDRAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLING+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|385323955|ref|YP_005878394.1| DNA gyrase subunit A [Neisseria meningitidis 8013]
gi|261392342|emb|CAX49878.1| DNA gyrase subunit A [Neisseria meningitidis 8013]
Length = 916
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/896 (51%), Positives = 626/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE R R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK+K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESPNAVEAKDKLLAHPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT +++++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDREEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITRIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 ----------------------------NSVRAMGRSARGV----------IGMRLEKKQ 739
+S A+ GV GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDGIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|87119282|ref|ZP_01075180.1| DNA gyrase subunit A [Marinomonas sp. MED121]
gi|86165673|gb|EAQ66940.1| DNA gyrase subunit A [Marinomonas sp. MED121]
Length = 893
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/858 (51%), Positives = 616/858 (71%), Gaps = 15/858 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+ + +E E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE N WN
Sbjct: 1 MGELAKEITPVSIENELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEEKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG +GKYHPHGD ++YDA+VR+AQ FS+R TLVDGQGNFGS+DGD+ AAM
Sbjct: 61 KAYKKSARIVGNVIGKYHPHGDTAVYDAIVRLAQPFSMRYTLVDGQGNFGSVDGDNPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ L+DL+KET+DF+ NYDG E P V+PTRIP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKIAHNFLMDLEKETVDFVPNYDGTEHMPEVMPTRIPGLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG L ++ N +I++L++ IP PDFPT+ I G + + D Y TG+G++
Sbjct: 181 NIPPHNLSEVIDGSLALIDNEAITIDELMEYIPGPDFPTSAFINGRAGIVDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ HIE + NR AI+ E+PYQ+NK ++EKI++LVK+KKLE IS LRDESDK G
Sbjct: 241 YMRARHHIEPMEKGNREAIVFTEIPYQLNKARVIEKIAELVKDKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E ++V+N L+ QTQLQ FG+NM+ALV+G+P+LLNLK++L F+ HR+E
Sbjct: 301 MRIVIELRRGENADVVVNNLFIQTQLQGVFGINMVALVDGRPELLNLKQVLECFVKHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE H+LEGL +AL NI+ I++IR + T EAK K++ W DV
Sbjct: 361 VVTRRTIFELRKARERGHVLEGLAVALANIEEIIELIRQSPTSAEAKEKLVSKAWAPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
S ++ + + ++ Y LS +QAQ IL + L RLT +E +K+ N+Y+
Sbjct: 421 SAMLERAGTDACRPDDLPEEFGFKDGSYY-LSPVQAQAILDLRLHRLTGLEHEKLQNEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+I+ + +L IL++ R++E+I +EL IK ++G ++RR+EI+ + + + DLI
Sbjct: 480 ALIELIAELLHILASPARLMEVIREELEEIKAQFG----DVRRTEILTSRQDLTVADLID 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
MV+T+SN GY KSQP+ EY+AQ+RGGRGK + KDED I+ L + ++HD I+ FSN
Sbjct: 536 EAPMVVTISNTGYAKSQPLEEYQAQRRGGRGKSSSSMKDEDHISHLLVTSSHDTIMLFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN-------- 652
+G++YWL+V++IP SRN++G+PI+N+ L E I+ +LPL ++ ++
Sbjct: 596 FGKVYWLRVFEIPVASRNAKGRPIVNLLPLSEGESISALLPLVAPEKSDAEDAETEVSED 655
Query: 653 --NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSG 710
+++FM+T+ G VKKT + +F+ PR +G+IA++L D L+G ++T+G+ DIML S +G
Sbjct: 656 AESFIFMATANGTVKKTAMQHFARPRSTGLIALSLDESDELVGVSITNGNDDIMLVSSTG 715
Query: 711 KAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKE 770
K +RF E+ VRAMGR+A GV G++L + + L+ + SVLTA E+GYGKRT I +
Sbjct: 716 KTIRFKESDVRAMGRTAAGVRGIKLAAEGAKVVSLIVPEEGMSVLTACEHGYGKRTAIDD 775
Query: 771 YTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQ 830
+ + RG +G+I I+ + RNG VV A V EI+LIT G L+RTRVSE+ GR+TQ
Sbjct: 776 FPVYGRGGQGVIGIQVSDRNGPVVGAVQVADDDEIILITDQGTLVRTRVSEVSCQGRNTQ 835
Query: 831 GVILITVENKSKLCGVQR 848
GV LI + N+ +L GV R
Sbjct: 836 GVTLIRLTNEEQLVGVVR 853
>gi|148549153|ref|YP_001269255.1| DNA gyrase subunit A [Pseudomonas putida F1]
gi|397695764|ref|YP_006533647.1| DNA gyrase subunit A [Pseudomonas putida DOT-T1E]
gi|148513211|gb|ABQ80071.1| DNA gyrase subunit A [Pseudomonas putida F1]
gi|397332494|gb|AFO48853.1| DNA gyrase subunit A [Pseudomonas putida DOT-T1E]
Length = 919
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/889 (49%), Positives = 629/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTIDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++ALV+G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L + Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADACRPEDLPEQYGLHDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG ++RR+EI+ + + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DVRRTEILNASHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS----NNKRDF------ 649
+ G++YW K ++IP+ SR +RG+P++N+ L+ E+IT +L + D
Sbjct: 596 SKGKVYWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELDE 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 ADDTVLEGELVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQR 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V
Sbjct: 776 IISMLIPESGSQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ + R+TQGV LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERI 883
>gi|52424913|ref|YP_088050.1| DNA gyrase subunit A [Mannheimia succiniciproducens MBEL55E]
gi|52306965|gb|AAU37465.1| GyrA protein [Mannheimia succiniciproducens MBEL55E]
Length = 888
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/883 (51%), Positives = 635/883 (71%), Gaps = 47/883 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + +++ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M++ N +N
Sbjct: 1 MTELVQDITPVSIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMNQSGNTYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ +VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KSYVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I+ ELL DLDKET+DF NYDGKE P VLPT+IP+LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQRITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPSLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + SI++L++ IP PDFPTA +I G + + Y TG+G+V
Sbjct: 181 NIPPHNLGEVMDGCLAYMDNEDISIDELMQFIPGPDFPTAALINGRRGIEEAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK + E N + R III E+PYQVNK L+EKI +LV++KK+E I+ + D S+K G
Sbjct: 241 YVRAKASV-EINDKGREQIIITEIPYQVNKAKLVEKIGELVRDKKIEGIAGVLDLSNKEG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+ I++KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLK+I+ F+ HR+E
Sbjct: 300 IRLEIDIKRDAVGEVVLNHLYALTQMQVTFGINMVALDHGQPRLFNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W+L +V
Sbjct: 360 VVTRRTVYELRKARERAHILEGLAIALANIDPVIELIRASKTADEARENLLSRAWSLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNND-MYKLSDIQAQEILKMPLQRLTNMEQKKII 476
+ ++ G + + ++ ++L +D Y LS+ QA+ IL++ L RLT +E +KI+
Sbjct: 420 APMLEAAGVDASRPDGLA-----AELGAHDGQYFLSETQARAILELRLHRLTGLEHEKIV 474
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
+Y ++ ++ +L IL++S R+ E+I +EL ++K+ Y RR+EI + + + E
Sbjct: 475 EEYHEILLQIGELIRILTSSVRLNEVIREELELVKSTYNDE----RRTEITAASGDINLE 530
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLIA +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K++D+I +L +ANTHD IL
Sbjct: 531 DLIAQEDVVVTLSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEDDFIERLLVANTHDTIL 590
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CFS+ GRLYWLKV+Q+P+ SR +RG+PI+N+ L++ E+IT ILP+++ + ++ +V
Sbjct: 591 CFSSRGRLYWLKVYQLPEASRGARGRPIVNILPLEDNERITAILPVAS----YDEDKFVV 646
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
M+T+ GIVKKT L+ FS PR +GIIAVNL +ED LIG +TDGS +IMLFS G+ VRF
Sbjct: 647 MATACGIVKKTALTEFSRPRANGIIAVNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFA 706
Query: 717 ENSVRAMGRSARGVIGMRLEKK----------------------------QKVIALLVSN 748
E +VRAMGR+A GV G++L KV++L++
Sbjct: 707 EAAVRAMGRTATGVRGIKLALTNDISDDESAVEIEEISDDNAEDTLDLNIDKVVSLVIPK 766
Query: 749 NQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
N+ ++LTAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLI
Sbjct: 767 NEG-AILTATQNGYGKRTALNEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLI 825
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
T G L+RTRVSE+ +GR+TQGV LI + ++R+ +
Sbjct: 826 TDAGTLVRTRVSEVSIVGRNTQGVRLIRTAEDEHVVSLERVAE 868
>gi|407696803|ref|YP_006821591.1| DNA gyrase subunit A-like protein [Alcanivorax dieselolei B5]
gi|407254141|gb|AFT71248.1| DNA gyrase subunit A-like protein [Alcanivorax dieselolei B5]
Length = 899
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/884 (50%), Positives = 629/884 (71%), Gaps = 39/884 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AKEV + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTDLAKEVTPVNIEDELRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNHWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP++K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 RPYLKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++EL DLDKET+DF+ NYDG E+ P V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELQADLDKETVDFVDNYDGTERIPEVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ + + +DL++ I PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDDDSLTPDDLMRYIQGPDFPTAGIINGRAGIVQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +EE ++ + AII+ ELPYQVNK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 YVRARATVEEADKSGKEAIIVTELPYQVNKARLIEKIAELVKDKKIEGITELRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IEL+R E ++VLN LY+QTQ+++ FG+N++AL +GQPK LNL+++L F+ HR+E
Sbjct: 301 MRIYIELRRGENGDVVLNNLYQQTQMESVFGINIVALEDGQPKTLNLRQLLDAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE AH+LEGL +AL NID I++I+++ + EA+ K++ W DV
Sbjct: 361 VVTRRTVYELRKAREKAHLLEGLAVALANIDPVIELIKASPSGAEAREKLLAKGWAPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKL--QNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++ + I++ +N+ + + +Y LS QAQ IL + LQ+LT +E++K++
Sbjct: 421 LTML--ERAGGEDIARPDNLDEQFGLRDGLYYLSPEQAQAILDLRLQKLTGLEREKLVTD 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +++++ +L+ IL++ +R++E+I +EL I+++Y RRSEI + + S EDL
Sbjct: 479 YQELLEQIRELSLILADPERLLEVIREELQAIRDEYADE----RRSEIQTSRSDLSMEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA + +V+TLS+ GY K QPI Y AQ+RGGRGK A KDED++ QL +A THD +LCF
Sbjct: 535 IAEETVVVTLSHGGYAKVQPIDTYAAQRRGGRGKAATTVKDEDYVEQLLVAGTHDTLLCF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMF-SLKNKEKITVILPLSNNK----------- 646
++ G++YWL+V+++PQG RNSRGKPIIN+ +L+ +E+IT IL L
Sbjct: 595 TSIGKVYWLRVFELPQGGRNSRGKPIINLIPALQKEERITAILRLDAEMVRQQGNTEDED 654
Query: 647 ------------------RDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNE 688
D ++FM+ S G+VK+T L+ F+ PR +G+IAV L
Sbjct: 655 EAETDGADVIEDAEGVEVEDSTPGPFIFMAISNGVVKRTELAKFARPRSNGLIAVKLQEG 714
Query: 689 DFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSN 748
+ L+ A+T G+ D++L + +GK VRF E+ VR MGR+ARGV GM++ ++VIAL+V
Sbjct: 715 EHLVNVAITQGAEDVVLVAGNGKVVRFQESKVRVMGRTARGVRGMKVADGEEVIALIVPQ 774
Query: 749 NQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
Q +LTA+E+GYGKRT + E+ RGT+G+I + N+RNG +V A V +IMLI
Sbjct: 775 EGGQ-LLTASEHGYGKRTDMSEFPTKGRGTQGVIGMVVNERNGSLVGAAQVFGEEDIMLI 833
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
+ G L+RTRV E+ + R+TQGV LI + + L G+ + ++
Sbjct: 834 SNQGTLVRTRVDEVSHLSRNTQGVRLIRLGDGEALSGLATIPEL 877
>gi|395444842|ref|YP_006385095.1| DNA gyrase subunit A [Pseudomonas putida ND6]
gi|388558839|gb|AFK67980.1| DNA gyrase subunit A [Pseudomonas putida ND6]
Length = 919
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/889 (49%), Positives = 629/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTIDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++ALV+G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L + Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADACRPEDLPEQYGLHDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG ++RR+EI+ + + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DVRRTEILNASHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS----NNKRDF------ 649
+ G++YW K ++IP+ SR +RG+P++N+ L+ E+IT +L + D
Sbjct: 596 SKGKVYWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELDE 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 ADDTVLEGELVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQR 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V
Sbjct: 776 IISMLIPESGSQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ + R+TQGV LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERI 883
>gi|110834612|ref|YP_693471.1| DNA gyrase subunit A [Alcanivorax borkumensis SK2]
gi|110647723|emb|CAL17199.1| DNA gyrase, subunit A [Alcanivorax borkumensis SK2]
Length = 920
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/899 (50%), Positives = 631/899 (70%), Gaps = 49/899 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+EV + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE+NN WN
Sbjct: 1 MTDLAREVTPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG E+ P V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDFVDNYDGTERIPDVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L ++ + + +DL++ I PDFPTAGII G + + Y TG+GRV
Sbjct: 181 NIPPHNLGEVVDGCLALIDDDSLTPDDLMEYIKGPDFPTAGIINGRAGIVQAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE ++ + AII+ E+PYQVNK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 YMRARAEIEATDKSGKEAIIVTEIPYQVNKARLIEKIAELVKDKKIEGITELRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIEL+R E E+VLN LY+QTQ+++ FG+N +ALV+GQPK+LNL+E+L FI HR+E
Sbjct: 301 MRIVIELRRGENAEVVLNNLYQQTQMESVFGINTVALVDGQPKILNLRELLDAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE AH+LEGL +AL+NID I++I+++ + EAK K+++ W DV
Sbjct: 361 VVTRRTVYELRKAREKAHLLEGLAVALSNIDPVIELIKASPSGAEAKAKLLDKGWKPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+++ + ++ + + + + +Y LS QAQ IL + LQ+LT +E++K+IN
Sbjct: 421 LQML--ERAGGENAARPDGLDEQYGLVDGLYHLSPEQAQAILDLRLQKLTGLEREKLIND 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +++++ +L IL N +R++E+I +EL ++ +Y RRSEI+ + + S EDL
Sbjct: 479 YQELLEQIAELLKILGNPERLMEVIREELQAVREEYADE----RRSEIVASRQDFSMEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA + +V+TLSN GY K QPI YRAQKRGGRGK A KD+D++ L +A THD +L F
Sbjct: 535 IAEETVVVTLSNGGYAKMQPIDTYRAQKRGGRGKSAGQLKDQDYVEHLLVAGTHDTLLLF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMF-SLKNKEKITVILPLSNN------------ 645
+N G+++WL+ +++PQG R SRGKPI+N+ +L E+IT IL L +
Sbjct: 595 TNAGKVFWLRTFELPQGGRASRGKPIVNLLPALGADERITAILRLDADMVRQQKAGGEED 654
Query: 646 ---------------------------KRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKS 678
D ++FM+TS GIVK+T L+NF+ PR S
Sbjct: 655 IVDVDDAADVIEDETDSDVEVEGEVEAVTDTVPGPFIFMATSSGIVKRTALANFARPRSS 714
Query: 679 GIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKK 738
G+IAV L + L+ A+T G DIML + +GKAVRF+++ VR M R ARGV G++L +
Sbjct: 715 GLIAVKLQEGEHLVNVAITQGHEDIMLVARNGKAVRFHQSKVRVMSRLARGVRGIKLAEG 774
Query: 739 QKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATL 798
VI+L+V Q +LTA+E+GYGKRT + +Y RG +G+I++ N+RNG++V AT
Sbjct: 775 VDVISLIVPEENGQ-ILTASEHGYGKRTPLTDYPTKGRGGQGVIAMVINERNGELVGATQ 833
Query: 799 VNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKK 857
V +IMLI+ G L+RT V+++ GR+TQGV LI + + LCG+ + ++ +++
Sbjct: 834 VFGEEDIMLISNQGTLVRTGVNQVSTSGRNTQGVRLIRLADGEALCGLATIPELEGVEE 892
>gi|146329479|ref|YP_001209241.1| DNA gyrase subunit A [Dichelobacter nodosus VCS1703A]
gi|146232949|gb|ABQ13927.1| DNA gyrase subunit A [Dichelobacter nodosus VCS1703A]
Length = 861
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/848 (53%), Positives = 614/848 (72%), Gaps = 10/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ FA+E++ + L +EM SYLDYAMSVI+GRALPD RDGLKPVHRRVLF+MH+ N WN
Sbjct: 1 MSDFAREIVPVNLIDEMRSSYLDYAMSVIIGRALPDARDGLKPVHRRVLFSMHKQGNAWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K A +VG+ MGKYHPHGD +IYD LVRMAQ FS+R LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KKYSKSATIVGDVMGKYHPHGDSAIYDTLVRMAQPFSMRYVLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL D++KET+DF+ NYDG ++EP+VLPT IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTESRMAKIAHSLLTDIEKETVDFMPNYDGSQEEPTVLPTLIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPH+L E +D VL+++ +PE +++DL+ +P PDFPT +I G +++ Y TGKGR+
Sbjct: 181 NIPPHHLGETLDAVLFLMDHPEATVSDLMHYLPGPDFPTGALINGTKGIYEAYETGKGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTHIE + I++DELPYQVNK LL KI++LVK+KK++ I+ LRDESDK G
Sbjct: 241 YIRAKTHIETDEHHGKQTIVVDELPYQVNKAVLLAKIAELVKDKKIDGITALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE++R E+ E++LN+L++QTQLQ TF +NM+ALV GQPKLL LK +L FI HR+E
Sbjct: 301 IRMVIEVRRGEVAEVILNQLFQQTQLQTTFSVNMVALVGGQPKLLGLKSLLNVFIAHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE AHILEGL +AL+NID+ I +I+S + P +AK ++ W V
Sbjct: 361 VVTRRTIYELRKARERAHILEGLAVALSNIDDIISVIKSAAEPAKAKELLLSQAWLAEHV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + ++ L Y LS QAQ IL + L RLT +EQ+KII +Y+
Sbjct: 421 AVMLAHAGAENSRPEQLAEEYGLHAGGYY-LSPEQAQAILDLRLHRLTGLEQEKIIEEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++I+ + IL +R++ +I +EL IK ++ R + I+ ++ S EDLIA
Sbjct: 480 SIIRDIEGFLAILHIPERLVAVIKEELLAIKAQFNDQ----RCTHILDTHLDLSMEDLIA 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D VITLS+ GYIK+QP+S+Y AQ+RGG+GK KD+D++ QLFIANTHD +LCFSN
Sbjct: 536 EEDRVITLSHEGYIKAQPLSDYEAQRRGGKGKSVTAIKDQDFVEQLFIANTHDTMLCFSN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+++P SRN++GKPI+N+ + E++ IL R++P++ Y+F +T
Sbjct: 596 KGKVYWLKVYELPHASRNAKGKPIVNLLPFEADERLNAIL----TTREYPEDLYLFFATQ 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT LS +S PR +GIIA+NL ++D L+ LT+G +IMLFS++GKAVRF+E +V
Sbjct: 652 NGTVKKTPLSEYSRPRANGIIAINLRDDDQLVDVELTNGERNIMLFSNAGKAVRFSEETV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR+A GV GMRLE QKVIAL V +Q +LT TENGYGKRT +Y + RGTKG
Sbjct: 712 RSMGRAAGGVRGMRLEAGQKVIALCVLKDQG-DILTITENGYGKRTPTADYPQKGRGTKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISI ++RNG V A V +IML+T G L+RTRV EI GR+TQGV LI
Sbjct: 771 VISIMCSERNGNAVYAIQVCEDEDIMLVTDNGTLVRTRVCEISTSGRNTQGVRLIRTAES 830
Query: 841 SKLCGVQR 848
K+ +
Sbjct: 831 EKVIAAAK 838
>gi|386013361|ref|YP_005931638.1| DNA gyrase subunit A [Pseudomonas putida BIRD-1]
gi|313500067|gb|ADR61433.1| DNA gyrase subunit A [Pseudomonas putida BIRD-1]
Length = 919
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/889 (49%), Positives = 629/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTIDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++ALV+G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L + Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADACRPEDLPEQYGLHDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG ++RR+EI+ + + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DVRRTEILNASHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS----NNKRDF------ 649
+ G++YW K ++IP+ SR +RG+P++N+ L+ E+IT +L + D
Sbjct: 596 SKGKVYWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDELLDE 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 ADDTVLEGELVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQR 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V
Sbjct: 776 IISMLIPESGSQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ + R+TQGV LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERI 883
>gi|407691890|ref|YP_006816679.1| DNA gyrase subunit A [Actinobacillus suis H91-0380]
gi|407387947|gb|AFU18440.1| DNA gyrase subunit A [Actinobacillus suis H91-0380]
Length = 896
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/885 (51%), Positives = 626/885 (70%), Gaps = 46/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + SI +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEQISIEELMRFIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R I++ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTEK-GREQIVVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLARAWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLPENLGVRDGQ----YYLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L ILS+++R++E+I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYKELLTEIGELLRILSSAERLMEVIREELEKVKAEFGDE----RRTEITAASGDINMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G+VKK L FSN R SG+IA+ L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGVVKKVSLDAFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLEKKQ-----------------------------KVIALLV 746
E +VRAMGR+A GV G++L + +V++L++
Sbjct: 710 AEKAVRAMGRTATGVRGIKLATTEISSEEIEDAEIVEIENEEADESSVSLDTDRVVSLVI 769
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
+ +LT T+NG+GKRT+I EY +R TKG++SIK N+RNGKVVAA V +IM
Sbjct: 770 PRTEG-DILTVTQNGFGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEEADQIM 828
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LIT G L+RTRV+E+ +GR+TQGV +I + + V+R+C+
Sbjct: 829 LITDAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSVERVCE 873
>gi|333376443|ref|ZP_08468222.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Kingella kingae ATCC
23330]
gi|332967948|gb|EGK07036.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Kingella kingae ATCC
23330]
Length = 918
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/894 (51%), Positives = 638/894 (71%), Gaps = 55/894 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
QFAKE I++ LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 17 QQFAKETIAVSLEDEMKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNG 76
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K ARVVG+ +GKYHPHGD ++Y +VRMAQ FS+R TLVDGQGNFGS+DGD+AAAMR
Sbjct: 77 AYKKSARVVGDVIGKYHPHGDSAVYQTIVRMAQPFSMRYTLVDGQGNFGSVDGDAAAAMR 136
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D++++T++F NYDG E+EP VLPTR P LL+NGS GIAVGMAT+
Sbjct: 137 YTEIRMEKIAHEMLADIEEDTVNFGDNYDGSEREPLVLPTRFPALLVNGSEGIAVGMATS 196
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + + G L +L PE IN+LI II APDFPT IYGL+ + GY+TG+GRV+
Sbjct: 197 IPPHNLRDTLAGCLKLLREPETDINELIDIIKAPDFPTGATIYGLTGIRAGYHTGRGRVV 256
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IR+KTHIE + R AII+DE+PYQVNK L+EKI LV++K +E I+ LRDESDK G
Sbjct: 257 IRSKTHIEPIGKNGEREAIIVDEIPYQVNKSKLVEKIGDLVRDKAIEGIAELRDESDKDG 316
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
RIVIELKRNE E++LN+LYK TQLQ+TFG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 317 TRIVIELKRNENAEVILNQLYKLTQLQDTFGINMVALVDGQPRLLNLKQILSEFLRHRRE 376
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I +I+ ++ + A+ ++ W V
Sbjct: 377 VVTRRTLFRLKKARAEGHIAEGKAVALSNIDEMIALIKQSADVETAREALLGRAWQSALV 436
Query: 421 SKIIGFNKKNYNTISK--INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S+++ + + + + LQ D Y LSD QA+ IL+M L+ LT ++Q +I+ +
Sbjct: 437 SEMLSRSDLDLSMARPEWLPENRGLQ-ADGYWLSDEQARAILRMSLRNLTGLDQDEIVKE 495
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI---NPST 535
Y++++ ++DL DIL+ +R+ +II DEL +++ ++G R+SEI NA+ + +
Sbjct: 496 YKDLMAVIVDLLDILAKPERVRQIIDDELVVMQTQFGDE----RKSEI--NAVGGGDIAD 549
Query: 536 EDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYI 595
EDLI ++MV+TL++ GYIK+QP S+Y+AQKRGGRGK+A TKDED+I LF+ANTHDY+
Sbjct: 550 EDLIPPREMVVTLTHGGYIKTQPTSDYQAQKRGGRGKQAAATKDEDFIETLFVANTHDYL 609
Query: 596 LCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYV 655
+CF+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ ILP+ RDFP++ YV
Sbjct: 610 MCFTNLGKCHWIKVYRLPEGGRNSRGRPINNVIQLEENEKVSAILPV----RDFPEDEYV 665
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
F +T+LG+VKK LS F N GI A+ L + D L+G A T GS DIMLFS+ GKA+RF
Sbjct: 666 FFATTLGMVKKVQLSAFKNVSVKGIKAIALRDGDSLVGVAKTSGSSDIMLFSNLGKAIRF 725
Query: 716 NE-------------------------------------NSVRAMGRSARGVIGMRLEKK 738
NE +R GR + G+ GM+L +
Sbjct: 726 NEFYNPTSNDDESEDVSGSLNDENSADDDNSSEFNLLTNKGIRPSGRGSGGLRGMKLPEN 785
Query: 739 QKVIALLVSN-NQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++++LLV+ VLTAT+NGYGKRT I++Y++ +G +GII+I T +RNG++V A
Sbjct: 786 GRIVSLLVAELGSDLQVLTATQNGYGKRTPIEDYSRKGKGGQGIIAIDTGERNGELVGAA 845
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LV+ ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ + L ++R+ +
Sbjct: 846 LVSPSDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGTTLVSIERVAE 899
>gi|320156817|ref|YP_004189196.1| DNA gyrase subunit A [Vibrio vulnificus MO6-24/O]
gi|319932129|gb|ADV86993.1| DNA gyrase subunit A [Vibrio vulnificus MO6-24/O]
Length = 903
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/880 (52%), Positives = 628/880 (71%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++N +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAYINNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILE L +AL NID I++IR+ +TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELKKARDRAHILEALALALANIDEIIELIRNAATPAEAKAGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLESAGTDAARPDWLEPQYGIRDGQ----YFLTETQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I +EL ++++ +G ++RR+EI + + E+
Sbjct: 476 EYKALLDEIKELMHILASTERLMEVIREELEMVRDAFG----DVRRTEITAASHDIDLEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F + ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSADKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L FSN R +G+IAVNL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFSNVRANGLIAVNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 -------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
VR MGR+A GV GM+L +V++L+V N
Sbjct: 708 AEESPVLDENGNPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKNDG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT++ EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTVLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVEDGDEFMMITDAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ ++
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTAEDESVVGLQRIDEV 866
>gi|431801322|ref|YP_007228225.1| DNA gyrase subunit A [Pseudomonas putida HB3267]
gi|430792087|gb|AGA72282.1| DNA gyrase subunit A [Pseudomonas putida HB3267]
Length = 921
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/889 (49%), Positives = 630/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD+++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTAG+I G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTIDELMQHIPGPDFPTAGLINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I++ ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++ALV+G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L+ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADSCRPEDLPEQYGLREGKYY-LSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG + RR+EI+ + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DARRTEILDARHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED++ L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYVEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWLK + IP+ SR +RG+P++N+ L+ E+IT +L + N D
Sbjct: 596 SKGKVYWLKTYDIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADADEELED 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 AEDTVLEGEVVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V
Sbjct: 776 IISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLAADETLVGLERI 883
>gi|421522466|ref|ZP_15969107.1| DNA gyrase subunit A [Pseudomonas putida LS46]
gi|402753566|gb|EJX14059.1| DNA gyrase subunit A [Pseudomonas putida LS46]
Length = 923
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/889 (49%), Positives = 629/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTIDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++ALV+G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L + Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADACRPEDLPEQYGLHDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG ++RR+EI+ + + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DVRRTEILNASHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS----NNKRDF------ 649
+ G++YW K ++IP+ SR +RG+P++N+ L+ E+IT +L + D
Sbjct: 596 SKGKVYWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELDE 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 ADDTVLEGELVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQR 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V
Sbjct: 776 IISMLIPESGSQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ + R+TQGV LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERI 883
>gi|1346236|sp|P48371.1|GYRA_NEIGO RecName: Full=DNA gyrase subunit A
gi|529408|gb|AAA82128.1| DNA gyrase subunit A [Neisseria gonorrhoeae]
Length = 916
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/896 (52%), Positives = 626/896 (69%), Gaps = 56/896 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNLT+ I+ L +L P+ I++LI II APDFPT IYGL V +GY TG+GRV+
Sbjct: 190 IPPHNLTDTINACLRLLDEPKTEIDELIDIIQAPDFPTGATIYGLGGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R I+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 MRGKTHIEPIGKNGERERIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI E +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAERKAVALSNIDEIIKLIKESPNAAEAKEKLLARPWASSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + + NI + Y LS+IQA IL+M L+ LT ++QK+II
Sbjct: 430 EEMLTRSGLDLEMMRPEGLVANIGLKKQG--YYLSEIQADAILRMSLRNLTGLDQKEIIE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
Y+N++ K+ID DILS +RI +II DEL IK YG RRSEI + + ED
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDE----RRSEINPFGGDIADED 543
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 544 LIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMC 603
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++ YVF
Sbjct: 604 FTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPEDQYVFF 659
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G+VKK LS F N R GI A+ L D+L+GAA T G+ DIMLFS+ GKA+RFNE
Sbjct: 660 ATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNE 719
Query: 718 --------------------------------------NSVRAMGRSARGVIGMRLEKKQ 739
N VR GR + G+ GMRL
Sbjct: 720 YWEKSGNDEAEDADIETEISDDLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADG 779
Query: 740 KVIALLVSNNQKQ----SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVA 795
K+++L+ + + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG +VA
Sbjct: 780 KIVSLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVA 839
Query: 796 ATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
ATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 840 ATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 895
>gi|424601444|ref|ZP_18040597.1| DNA gyrase, A subunit [Vibrio cholerae CP1047(20)]
gi|395977826|gb|EJH87224.1| DNA gyrase, A subunit [Vibrio cholerae CP1047(20)]
Length = 894
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/880 (52%), Positives = 620/880 (70%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLING+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+ G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 AIGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI 866
>gi|37679431|ref|NP_934040.1| DNA gyrase subunit A [Vibrio vulnificus YJ016]
gi|37198175|dbj|BAC94011.1| DNA gyrase, subunit A [Vibrio vulnificus YJ016]
Length = 900
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/880 (52%), Positives = 628/880 (71%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L ++N +I++L+ IP PDFPTA +I G + D Y TG+G++
Sbjct: 181 NIPPHNLTEVIDGCLAYINNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVK+KK+E IS LRDESDK G
Sbjct: 241 YMRSKAEI-EVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILE L +AL NID I++IR+ +TP EAK ++ W+L +V
Sbjct: 360 VVTRRTIFELKKARDRAHILEALALALANIDEIIELIRNAATPAEAKAGLVARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + I Q Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLESAGTDAARPDWLEPQYGIRDGQ----YFLTETQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++E+I +EL ++++ +G ++RR+EI + + E+
Sbjct: 476 EYKALLDEIKELMHILASTERLMEVIREELEMVRDAFG----DVRRTEITAASHDIDLEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A KDED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F + ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSADKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L FSN R +G+IAVNL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFSNVRANGLIAVNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 -------------------------NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
VR MGR+A GV GM+L +V++L+V N
Sbjct: 708 AEESPVLDENGNPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKNDG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT++ EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTVLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVEDGDEFMMITDAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ ++
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTAEDESVVGLQRIDEV 866
>gi|339486335|ref|YP_004700863.1| DNA gyrase subunit A [Pseudomonas putida S16]
gi|338837178|gb|AEJ11983.1| DNA gyrase subunit A [Pseudomonas putida S16]
Length = 921
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/889 (49%), Positives = 629/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTAG+I G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTIDELMQHIPGPDFPTAGLINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I++ ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++ALV+G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L+ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADSCRPEDLPEQYGLREGKYY-LSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG + RR+EI+ + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DARRTEILDARHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED++ L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYVEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL------SNNKRD----- 648
+ G++YWLK + IP+ SR +RG+P++N+ L+ E+IT +L + N D
Sbjct: 596 SKGKVYWLKTYDIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADADEELED 655
Query: 649 ----------------------------FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 AEDTVLEGEVVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V
Sbjct: 776 IISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLATDETLVGLERI 883
>gi|192382560|gb|ACF04301.1| GyrA [Neisseria lactamica]
Length = 912
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/899 (51%), Positives = 624/899 (69%), Gaps = 64/899 (7%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ I+ L +L PE I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTINACLRLLDAPETEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTH E + R AI+IDE+PYQVNK L+EKI +LV+EK LE IS LRDESDKSG
Sbjct: 250 IRAKTHTEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ +W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESPNAVEAKEKLLARSWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT +++++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDREEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP---- 533
Y+N++ K+ID DILS +RI II DEL IK YG + L+ INP
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITRIIRDELEEIKTNYGDER---------LSEINPFGGD 538
Query: 534 -STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+ EDLI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTH
Sbjct: 539 IADEDLIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DY++CF+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++
Sbjct: 599 DYLMCFTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPED 654
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVF +T+ GIVKK LS F N R GI A+ L D LIGAA T GS DIMLFS+ GKA
Sbjct: 655 QYVFFATAQGIVKKVRLSAFKNVRAQGIKAIALKEGDSLIGAAQTGGSDDIMLFSNLGKA 714
Query: 713 VRFNENSVRAMGRSAR-----------------------GVIGMR-------------LE 736
+RFNE ++ A G G+R L
Sbjct: 715 IRFNEYWEKSGNGEAEDADSETSDGIEDENADSENALPGGKYGVRPSGRGSGGMRGMRLP 774
Query: 737 KKQKVIALLV----SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGK 792
K+++L+ + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG
Sbjct: 775 ADGKIVSLITFAPEAGESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGD 834
Query: 793 VVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
+VAATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 835 LVAATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 893
Score = 44.7 bits (104), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDF-LIGAALTDGSYDIMLFSDSGK 711
V +T+ G K+T ++++S K G IA+N + L+ A L + D+ML + G
Sbjct: 796 VLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGGV 855
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL-LVSNNQKQSVLTATENGYGKRT 766
+R +R GR+A GV + L++ + +++L V+ + ++ + TE G T
Sbjct: 856 LIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEEETETDMPETEAGTSPET 911
>gi|261494960|ref|ZP_05991429.1| DNA gyrase subunit A [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309369|gb|EEY10603.1| DNA gyrase subunit A [Mannheimia haemolytica serotype A2 str.
OVINE]
Length = 898
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/883 (51%), Positives = 625/883 (70%), Gaps = 41/883 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++I + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+DF NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + S+ +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLGEVLDGCLAYIENEQISVEELMRYIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E ++ R I++ ELPYQVNK L+EKI++LVKEKK+E IS + D SDK G
Sbjct: 241 YVRAKASVETTDK-GREQIVVTELPYQVNKAKLIEKIAELVKEKKIEGISKIDDYSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL NGQPK+LNL++I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDNGQPKVLNLRQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T +EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRASKTAEEAREGLLARPWALGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ + Y LS+ QA+ IL++ L RLT +E +KI+ +Y+
Sbjct: 420 APMLEAAGVGASRPEDLPEHLGVRDGEYY-LSEAQARAILELRLHRLTGLEHEKIVEEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL +K + RR+EI + + + EDLIA
Sbjct: 479 ELLTEIGELIHILTSPERLMEVIREELERVKTDFNDE----RRTEITAASGDINIEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYVFMS 658
GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++FM+
Sbjct: 595 RGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFIFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G+VKK L FSN R SG+IA+ L D LIG +TDG+ +IMLFS G+ VRF E
Sbjct: 653 TASGVVKKVSLDAFSNVRASGLIALKLREGDELIGVDITDGNSEIMLFSAQGRVVRFAET 712
Query: 719 SVRAMGRSARGVIGMRLEK------------------------------KQKVIALLVSN 748
+VRAMGR+A GV G++L K +V++L++
Sbjct: 713 AVRAMGRTATGVRGIKLSTTEISSEEIEEAEIIETDNEEAEDSSSVSLDKDRVVSLVIPR 772
Query: 749 NQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
+ +LT T+NGYGKRT+I EY +R TKG++SIK N+RNGKVVAA V +IMLI
Sbjct: 773 TEG-DILTVTQNGYGKRTVISEYPVKSRATKGVVSIKVNERNGKVVAAVQVEETDQIMLI 831
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
T G L+RTRV+E+ +GR+TQGV +I ++ ++R+C+
Sbjct: 832 TDAGTLVRTRVAEVSLVGRNTQGVRIIRTAEDEQVVSLERVCE 874
>gi|303249555|ref|ZP_07335762.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307251818|ref|ZP_07533720.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|302651629|gb|EFL81778.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306860725|gb|EFM92736.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
Length = 896
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/885 (51%), Positives = 626/885 (70%), Gaps = 46/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + SI +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEQISIEELMRFIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R II+ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTEK-GREQIIVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLARAWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLPENLGVRDGQ----YYLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L ILS+++R++E+I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYKALLTEIGELLRILSSAERLMEVIREELEKVKAEFGDE----RRTEITAASGDINMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G+VKK L +FSN R SG+IA+ L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGVVKKVSLDSFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLE-----------------------------KKQKVIALLV 746
E +VRAMGR+A GV G++L +V++L++
Sbjct: 710 AEKAVRAMGRTATGVRGIKLATTDISSEEIEEAEIVEIENEEAEESSVSLDTDRVVSLVI 769
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
+ +LT T+NG+GKRT+I EY +R TKG++SIK N+RNGKVVAA V +IM
Sbjct: 770 PRTEG-DILTVTQNGFGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEETDQIM 828
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LIT G L+RTRV+E+ +GR+TQGV +I + + V+R+C+
Sbjct: 829 LITDAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSVERVCE 873
>gi|372267295|ref|ZP_09503343.1| DNA gyrase subunit A [Alteromonas sp. S89]
Length = 857
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/851 (52%), Positives = 630/851 (74%), Gaps = 14/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+ I +EEE+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+E+ N WN
Sbjct: 1 MGELAKEISPINIEEELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELKNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++K+++ELL DLDKET++FI NYDG E+ P VLP+R+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHELLSDLDKETVNFIDNYDGSEQMPEVLPSRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EV+ G L ++ N E S+++L++ IP PDFPT II G + + Y TG+GR+
Sbjct: 181 NIPPHNLSEVVKGCLALIDNSELSVDELMEYIPGPDFPTGAIINGRAGILMAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK + ++ R III E+PYQ+NK L+E+I++LVKEKK+E IS LRDESDK G
Sbjct: 241 YIRAKAEVLRDDKSGRETIIIHEIPYQLNKARLIERIAELVKEKKIEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+RIVIELKR E+ ++VLN LY QTQL++ FG+NM+ALV+GQPKLLNLKE+L YFI HR+E
Sbjct: 301 LRIVIELKRGELGDVVLNNLYSQTQLESVFGINMVALVDGQPKLLNLKELLEYFIRHRQE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ LRKARE HILEGL IA++NID I++I+S++TP +A+ ++ W + DV
Sbjct: 361 VVTRRTVYLLRKARERGHILEGLAIAISNIDPVIELIKSSATPADAREALLAKGWPVGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKL--QNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ F ++ + +++ K +D Y LS QAQ IL++ L RLT ME K++ +
Sbjct: 421 QQ---FLERAGADACRPDDLPKEFGMRDDAYYLSPAQAQAILELRLHRLTGMEHDKLLAE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y ++++ + +IL + R++++I +EL +++ +YG RR++I+ + + S EDL
Sbjct: 478 YSERLEQIAEYLEILGSPVRLMQVIREELEVLEKEYGDE----RRTDIVASRQDLSVEDL 533
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I +D V+T+S+ GY KSQP+++Y+AQ+RGG GK A KDED++ L IAN+HD ILCF
Sbjct: 534 ITPEDKVVTISHGGYAKSQPLADYQAQRRGGMGKSATQVKDEDFVEHLLIANSHDTILCF 593
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
SN G++YWLKV+++P R SRG+P++NM L+ E+I+ ++P+S ++ +++++F +
Sbjct: 594 SNKGKVYWLKVYEVPTAGRASRGRPMVNMLPLEEDERISSMMPVS----EYDEDHFIFFA 649
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKKT L+ F+ PR G+ A+ L D L+ A+TDGS D++L + +GKA RF E
Sbjct: 650 TANGTVKKTPLTAFARPRSVGLRAIELEETDRLVATAITDGSRDVLLLTSAGKAARFAEE 709
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
+VR+MGR +RGV G+R+ + VI++++ + SV+ TENGYGKRT ++ RGT
Sbjct: 710 NVRSMGRVSRGVRGIRMAEGVSVISMVIP-EEGGSVMMVTENGYGKRTATADFPTKGRGT 768
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
+G+I+I ++RNG +V A V+ EIMLI+ G L+RTRV E+ +GR+TQGV +I ++
Sbjct: 769 QGVIAIAESERNGALVGACQVHPAEEIMLISDQGTLVRTRVDEVSVLGRNTQGVRVIRLK 828
Query: 839 NKSKLCGVQRL 849
+ +L G+ R+
Sbjct: 829 SGEQLVGLARI 839
>gi|254361818|ref|ZP_04977953.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mannheimia
haemolytica PHL213]
gi|452745359|ref|ZP_21945194.1| DNA gyrase subunit A [Mannheimia haemolytica serotype 6 str. H23]
gi|153093353|gb|EDN74349.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mannheimia
haemolytica PHL213]
gi|452086508|gb|EME02896.1| DNA gyrase subunit A [Mannheimia haemolytica serotype 6 str. H23]
Length = 898
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/883 (51%), Positives = 625/883 (70%), Gaps = 41/883 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++I + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+DF NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + S+ +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLGEVLDGCLAYIENEQISVEELMRYIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E ++ R I++ ELPYQVNK L+EKI++LVKEKK+E IS + D SDK G
Sbjct: 241 YVRAKASVETTDK-GREQIVVTELPYQVNKAKLIEKIAELVKEKKIEGISKIDDYSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL NGQPK+LNL++I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDNGQPKVLNLRQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T +EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRASKTAEEAREGLLARPWALGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ + Y LS+ QA+ IL++ L RLT +E +KI+ +Y+
Sbjct: 420 APMLEAAGVGASRPEDLPEHLGVRDGEYY-LSEAQARAILELRLHRLTGLEHEKIVEEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL +K + RR+EI + + + EDLIA
Sbjct: 479 ELLTEIGELIHILTSPERLMEVIREELERVKTDFNDE----RRTEITAASGDINIEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYVFMS 658
GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++FM+
Sbjct: 595 RGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFIFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G+VKK L FSN R SG+IA+ L D LIG +TDG+ +IMLFS G+ VRF E
Sbjct: 653 TASGVVKKVSLDAFSNVRASGLIALKLREGDELIGVDITDGNSEIMLFSAQGRVVRFAET 712
Query: 719 SVRAMGRSARGVIGMRLEK------------------------------KQKVIALLVSN 748
+VRAMGR+A GV G++L K +V++L++
Sbjct: 713 AVRAMGRTATGVRGIKLSTTEISSEEIEEAEIIETDNEEAEDSSSVSLDKDRVVSLVIPR 772
Query: 749 NQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
+ +LT T+NGYGKRT+I EY +R TKG++SIK N+RNGKVVAA V +IMLI
Sbjct: 773 TEG-DILTVTQNGYGKRTVISEYPVKSRATKGVVSIKVNERNGKVVAAVQVEETDQIMLI 831
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
T G L+RTRV+E+ +GR+TQGV +I ++ ++R+C+
Sbjct: 832 TDAGTLVRTRVAEVSLVGRNTQGVRIIRTAEDEQVVSLERVCE 874
>gi|313668529|ref|YP_004048813.1| DNA gyrase subunit A [Neisseria lactamica 020-06]
gi|192382558|gb|ACF04300.1| GyrA [Neisseria lactamica]
gi|313005991|emb|CBN87450.1| DNA gyrase subunit A [Neisseria lactamica 020-06]
Length = 912
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/899 (51%), Positives = 623/899 (69%), Gaps = 64/899 (7%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ I+ L +L PE I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTINACLRLLDAPETEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTH E + R AI+IDE+PYQVNK L+EKI +LV+EK LE IS LRDESDKSG
Sbjct: 250 IRAKTHTEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESPNAAEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT +++++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDREEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP---- 533
Y+N++ K+ID DILS +RI II DEL IK YG + L+ INP
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITRIIRDELEEIKTNYGDER---------LSEINPFGGD 538
Query: 534 -STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+ EDLI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTH
Sbjct: 539 IADEDLIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DY++CF+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++
Sbjct: 599 DYLMCFTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPED 654
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVF +T+ GIVKK LS F N R GI A+ L D LIGAA T GS DIMLFS+ GKA
Sbjct: 655 QYVFFATAQGIVKKVRLSAFKNVRAQGIKAIALKEGDSLIGAAQTGGSDDIMLFSNLGKA 714
Query: 713 VRFNENSVRAMGRSAR-----------------------GVIGMR-------------LE 736
+RFNE ++ A G G+R L
Sbjct: 715 IRFNEYWEKSGNGEAEDADSETSDGIEDENADSENALPGGKYGVRPSGRGSGGMRGMRLP 774
Query: 737 KKQKVIALLV----SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGK 792
K+++L+ + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG
Sbjct: 775 ADGKIVSLITFAPEAGESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGD 834
Query: 793 VVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
+VAATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 835 LVAATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 893
Score = 44.7 bits (104), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDF-LIGAALTDGSYDIMLFSDSGK 711
V +T+ G K+T ++++S K G IA+N + L+ A L + D+ML + G
Sbjct: 796 VLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGGV 855
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL-LVSNNQKQSVLTATENGYGKRT 766
+R +R GR+A GV + L++ + +++L V+ + ++ + TE G T
Sbjct: 856 LIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEEETETDMPETEAGTSPET 911
>gi|421862763|ref|ZP_16294467.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379673|emb|CBX21662.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 912
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/899 (51%), Positives = 623/899 (69%), Gaps = 64/899 (7%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ I+ L +L PE I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTINACLRLLDAPETEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTH E + R AI+IDE+PYQVNK L+EKI +LV+EK LE IS LRDESDKSG
Sbjct: 250 IRAKTHTEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESPNAAEAKEKLLARPWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT +++++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDREEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP---- 533
Y+N++ K+ID DILS +RI II DEL IK YG + L+ INP
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITRIIRDELEEIKTNYGDER---------LSEINPFGGD 538
Query: 534 -STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+ EDLI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTH
Sbjct: 539 IADEDLIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DY++CF+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++
Sbjct: 599 DYLMCFTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPED 654
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVF +T+ GIVKK LS F N R GI A+ L D LIGAA T GS DIMLFS+ GKA
Sbjct: 655 QYVFFATAQGIVKKVRLSAFKNVRAQGIKAIALKEGDSLIGAAQTGGSDDIMLFSNLGKA 714
Query: 713 VRFNENSVRAMGRSAR-----------------------GVIGMR-------------LE 736
+RFNE ++ A G G+R L
Sbjct: 715 IRFNEYWEKSGNGEAEDADSETSDGIEDENADSENALPGGKYGVRPSGRGSGGMRGMRLP 774
Query: 737 KKQKVIALLV----SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGK 792
K+++L+ + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG
Sbjct: 775 ADGKIVSLITFAPEAGESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGD 834
Query: 793 VVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
+VAATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 835 LVAATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 893
Score = 44.7 bits (104), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDF-LIGAALTDGSYDIMLFSDSGK 711
V +T+ G K+T ++++S K G IA+N + L+ A L + D+ML + G
Sbjct: 796 VLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGGV 855
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL-LVSNNQKQSVLTATENGYGKRT 766
+R +R GR+A GV + L++ + +++L V+ + ++ + TE G T
Sbjct: 856 LIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEEETETDMPETEAGTSPET 911
>gi|198283144|ref|YP_002219465.1| DNA gyrase subunit A [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666147|ref|YP_002425372.1| DNA gyrase subunit A [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247665|gb|ACH83258.1| DNA gyrase, A subunit [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518360|gb|ACK78946.1| DNA gyrase, A subunit [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 845
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/846 (52%), Positives = 615/846 (72%), Gaps = 19/846 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKE I + LE+EM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHEM+N WN
Sbjct: 1 MIEFAKETIPVSLEKEMRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHEMSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTMVRMAQDFSMRYPLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++E+L DL+KET+DF NYD KE EP V+P RIPNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMSRIAHEMLADLEKETVDFGPNYDEKEMEPLVMPARIPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI L ++ +PE DL ++PAPDFPTAG I+G + + Y TG+GRV
Sbjct: 181 NIPPHNLTEVISACLALVDDPETPDEDLFTLVPAPDFPTAGFIHGRAGSIEAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ E + NR +II+ ELPYQVNK L+E+I+++VKEK+LE IS+LRDESDKSG
Sbjct: 241 VMRARCEFETDKKSNRQSIIVTELPYQVNKAKLIERIAEMVKEKRLEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IELKR+ ++VLN LY+ T +Q+ F +NM+AL++G P+ L L+++L FI HR+E
Sbjct: 301 MRIAIELKRDANADVVLNNLYQHTVMQSVFNINMVALLDGAPRTLGLRDLLQAFIQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KAR+ AHILEGL +AL N+D I +IR+ ++P EAK +++ +W V
Sbjct: 361 VVTRRTVFELKKARDRAHILEGLAVALVNLDPLISLIRAAASPAEAKAQMLAKSWEPGMV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ + + + S+ + D Y LS++QAQ IL + L RLT +EQ KI ++Y
Sbjct: 421 AAL----------LVERGEPSEGMHADGYHLSELQAQAILDLRLHRLTGLEQDKIRDEYL 470
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L +IL + R++E+I +EL I+++YG + RRSEI+ + + STEDLI
Sbjct: 471 ALLDRIRELLEILGSKTRLMEVIREELVAIRDQYG----DARRSEIVADTGDISTEDLIT 526
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
++MV+T ++ GYIK+QP++ + AQ+RGG+GK A TK+ED++ ++F A+TH Y L FSN
Sbjct: 527 EEEMVVTFTHAGYIKAQPVTVFNAQRRGGKGKMATTTKEEDFVERMFCASTHAYCLFFSN 586
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++W KV+Q+PQ R ++GKPI+NM SL E+IT +LP+ RDF + +V M TS
Sbjct: 587 LGKVFWQKVYQLPQAGRGAKGKPIVNMLSLAPTERITAVLPV----RDFTEGQFVCMVTS 642
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
LG+VKKT + +S PR GI A+NL D L+ L+DG + MLF+ G AVRF E V
Sbjct: 643 LGVVKKTPVMEYSRPRSQGINAINLDPGDRLVAVGLSDGQREFMLFTRHGMAVRFPEAKV 702
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+ARGV G+ LE+ +VI+ ++ Q +LT T NGYGK T + EY + NRG KG
Sbjct: 703 RAMGRNARGVRGISLEENDRVISAQWVDS-SQVILTTTANGYGKLTKVDEYRRTNRGGKG 761
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+TN+RNG VV A V E+ML++ G LIR V+ IR+ GR+ QGV LI +
Sbjct: 762 VIAIQTNERNGDVVGALAVTERDELMLVSDHGTLIRIAVNSIRRTGRNAQGVRLINLGEG 821
Query: 841 SKLCGV 846
+L G+
Sbjct: 822 EQLAGL 827
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
V T G +K ++ F+ R+ G +A EDF+ + FS+ GK
Sbjct: 531 VVTFTHAGYIKAQPVTVFNAQRRGGKGKMATTTKEEDFVERMFCASTHAYCLFFSNLGKV 590
Query: 713 VRFNENSVRAMGRSARG---VIGMRLEKKQKVIALLVSNN--QKQSVLTATENGYGKRTL 767
+ GR A+G V + L +++ A+L + + Q V T G K+T
Sbjct: 591 FWQKVYQLPQAGRGAKGKPIVNMLSLAPTERITAVLPVRDFTEGQFVCMVTSLGVVKKTP 650
Query: 768 IKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGR 827
+ EY++ ++GI +I + + ++VA L + E ML T G+ +R +++R MGR
Sbjct: 651 VMEYSRPR--SQGINAINLDPGD-RLVAVGLSDGQREFMLFTRHGMAVRFPEAKVRAMGR 707
Query: 828 STQGVILITVENKSKLCGVQ 847
+ +GV I++E ++ Q
Sbjct: 708 NARGVRGISLEENDRVISAQ 727
>gi|254427390|ref|ZP_05041097.1| DNA gyrase, A subunit [Alcanivorax sp. DG881]
gi|196193559|gb|EDX88518.1| DNA gyrase, A subunit [Alcanivorax sp. DG881]
Length = 935
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/887 (51%), Positives = 628/887 (70%), Gaps = 48/887 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+EV + +E+E+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHE++N WN
Sbjct: 1 MTDLAREVTPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG EK P V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDFVDNYDGTEKIPDVMPTRVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L ++ + + +DL++ I PDFPTAGII G + + Y TG+GRV
Sbjct: 181 NIPPHNLGEVVDGCLALIDDDSLTPDDLMEYIKGPDFPTAGIINGRAGIVQAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ IE ++ + AII+ E+PYQVNK L+EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 YMRARAEIEATDKSGKEAIIVTEIPYQVNKARLIEKIAELVKDKKIEGITELRDESDKEG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIEL+R E E+VLN LY+QTQ+++ FG+N +ALV+GQPK+LNL+E+L FI HR+E
Sbjct: 301 MRVVIELRRGENAEVVLNNLYQQTQMESVFGINTVALVDGQPKILNLRELLDAFIRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AH+LEGL +AL+NID I++I+++ + EAK K+++ W DV
Sbjct: 361 VVTRRTVFELRKAREKAHLLEGLAVALSNIDPVIELIKASPSGAEAKAKLLDKGWKPGDV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+++ + ++ + + + + +Y LS QAQ IL + LQ+LT +E++K+IN
Sbjct: 421 LQML--ERAGGENAARPDGLDEQYGLVDGLYHLSPEQAQAILDLRLQKLTGLEREKLIND 478
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +++++ +L IL N +R++E+I +EL ++ +Y RRSEI+ + + S EDL
Sbjct: 479 YQELLEQIAELLKILGNPERLMEVIREELQAVREEYADE----RRSEIVASRQDFSMEDL 534
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA + +V+TLSN GY K QPI YRAQKRGGRGK A KDED++ L +A THD +L F
Sbjct: 535 IAEETVVVTLSNGGYAKMQPIDTYRAQKRGGRGKSAGQLKDEDYVEHLLVAGTHDTLLLF 594
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMF-SLKNKEKITVILPL--------------- 642
++ G+++WL+ +++PQG R SRGKPI+N+ +L N+E+IT IL L
Sbjct: 595 TDAGKVFWLRTFELPQGGRASRGKPIVNLLPALGNEERITAILRLDAEMVRQQKAGGEEE 654
Query: 643 -----------------SNNKRDFP------KNNYVFMSTSLGIVKKTLLSNFSNPRKSG 679
S + D ++FM+TS GIVK+T L+NF+ PR SG
Sbjct: 655 EIVDADDVIDAVDDEADSEVEGDVETVAETVPGPFIFMATSSGIVKRTALANFARPRSSG 714
Query: 680 IIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQ 739
+IAV L + L+ A+T G DIML + +GKAVRF+++ VR M R ARGV G++L +
Sbjct: 715 LIAVKLQEGEHLVNVAITQGHEDIMLVARNGKAVRFHQSKVRVMSRLARGVRGIKLAEGV 774
Query: 740 KVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLV 799
+I+L+V Q +LTA+E+GYGKRT + +Y RG +G+I++ N+RNG++V AT V
Sbjct: 775 DLISLIVPEENGQ-ILTASEHGYGKRTPLTDYPTKGRGGQGVIAMVINERNGELVGATQV 833
Query: 800 NRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
+IMLI+ G L+RT V+++ GR+TQGV LI + + LCG+
Sbjct: 834 FGEEDIMLISNQGTLVRTGVNQVSTSGRNTQGVRLIRLADGEALCGL 880
>gi|307260747|ref|ZP_07542436.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
gi|306869586|gb|EFN01374.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
Length = 896
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/885 (51%), Positives = 625/885 (70%), Gaps = 46/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + SI +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEQISIEELMRFIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R II+ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTEK-GREQIIVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLARAWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLPENLGVRDGQ----YYLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L ILS+++R++E+I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYKALLTEIGELLRILSSAERLMEVIREELEKVKAEFGDE----RRTEITAASGDINMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKENDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G+VKK L +FSN R SG+IA+ L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGVVKKVSLDSFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLE-----------------------------KKQKVIALLV 746
E +VRAMGR+A GV G++L +V++L++
Sbjct: 710 AEKAVRAMGRTATGVRGIKLATTEISSEEIEEAEIVEIENEEAEESSVSLDTDRVVSLVI 769
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
+ +LT T+NG+GKRT+I EY +R TKG++SIK N+RNGKVVAA V +IM
Sbjct: 770 PRTEG-DILTVTQNGFGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEEADQIM 828
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LIT G L+RTRV+E+ +GR+TQGV +I + + V+R+C+
Sbjct: 829 LITDAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSVERVCE 873
>gi|444920933|ref|ZP_21240772.1| DNA gyrase subunit A [Wohlfahrtiimonas chitiniclastica SH04]
gi|444508153|gb|ELV08326.1| DNA gyrase subunit A [Wohlfahrtiimonas chitiniclastica SH04]
Length = 869
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/848 (52%), Positives = 614/848 (72%), Gaps = 11/848 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++FAKE++S+ LEEEM KSYLDYAMSVI+GRALPDVRDGLKPVHRR+L +M++ +N WN
Sbjct: 1 MSEFAKEIVSVNLEEEMRKSYLDYAMSVIIGRALPDVRDGLKPVHRRILHSMNQTHNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ MGKYHPHGD +IYD++VRMAQ FS+R LVDGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARIVGDVMGKYHPHGDSAIYDSIVRMAQPFSMRYMLVDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++ LL D+DKET+DFI NYDG E EPSVLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSRIAHTLLQDIDKETVDFIPNYDGSEVEPSVLPTQIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ NPE +I++L++ IPAPDFPTAGII G V + Y+TG+GRV
Sbjct: 181 NIPPHNLTETINACVALIQNPEVTIDELMEHIPAPDFPTAGIINGTKGVREAYHTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECIS--NLRDESDK 298
++RA+ IE + NR I++ ELPYQVNK L+EKI +L ++K +E I+ LRDESDK
Sbjct: 241 VMRARCDIEINEKRNREVIVVSELPYQVNKARLIEKIVELHRDKIIEGIAPDGLRDESDK 300
Query: 299 SGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHR 358
GMRIVIELKR E +VLN+LYK T LQ++F +NM+A+ GQPKLLNLK++L FI HR
Sbjct: 301 DGMRIVIELKRGESGMVVLNQLYKHTALQSSFSINMVAIDQGQPKLLNLKQVLEAFIAHR 360
Query: 359 KEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLP 418
+EVI RRTI++LRKARE AH+LEGLT+AL NID I++IRS+ AK K+++ W
Sbjct: 361 REVITRRTIYDLRKARERAHLLEGLTVALVNIDEMIELIRSSKDGATAKVKMLDKIWTAG 420
Query: 419 DVSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
DV ++ + + N + Y+L+++QAQ IL M LQRLT +EQ KI ++
Sbjct: 421 DVIPMLERAAELNEAAALDQNGEYGLIDGGYRLTEVQAQAILDMRLQRLTGLEQDKIHDE 480
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y+ +++ + +IL N R+ E++ +EL ++ + + RR+EI +A + DL
Sbjct: 481 YQILLEAIAAFIEILVNPDRLKEVVLEELEKVRADF----HDARRTEIRPSAEDIDILDL 536
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA + +V+TLS+ GYIK Q + EY+AQKRGGRGK A KDED + L +TH ++CF
Sbjct: 537 IADEQVVVTLSHRGYIKYQQLGEYQAQKRGGRGKSAAKVKDEDHVVNLITTSTHAQLMCF 596
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
S+ GR+YWL+ +++P+ R S G+PI+NM L E+IT ILP+ ++ ++ M+
Sbjct: 597 SSIGRVYWLRTYELPEAGRGSSGRPIVNMLPLSEGERITSILPVE----EYSAELFIVMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G++KKT L F++ R +G+IA+ L D LIG A+TDG DIMLF+ GK RF+E
Sbjct: 653 TRHGVIKKTSLDKFASQRSTGVIALTLDEGDELIGTAITDGEKDIMLFTSDGKVNRFSEA 712
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
VR GR ARGV M L Q +I++++ +L ATENGYGKRT +E+T+H RG
Sbjct: 713 DVRDTGRGARGVKSMNLTDAQTIISMIIP-EADSVILIATENGYGKRTRAEEFTRHRRGG 771
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG+I I+T++RNG V++A LV E++LI++ G+L+RTRVSEI +GR+TQGV LI ++
Sbjct: 772 KGMIGIQTSERNGSVISACLVKEDEEVILISSNGVLVRTRVSEISILGRNTQGVRLIRLD 831
Query: 839 NKSKLCGV 846
+L G+
Sbjct: 832 ESDQLVGL 839
>gi|190149558|ref|YP_001968083.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|307262878|ref|ZP_07544502.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 13
str. N273]
gi|189914689|gb|ACE60941.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306871783|gb|EFN03503.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 13
str. N273]
Length = 896
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/885 (51%), Positives = 626/885 (70%), Gaps = 46/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DL+KET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLEKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + SI +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEQISIEELMRFIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R II+ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTEK-GREQIIVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLARAWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLPENLGVRDGQ----YYLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L ILS+++R++E+I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYKALLTEIGELLRILSSAERLMEVIREELEKVKAEFGDE----RRTEITAASGDINMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G+VKK L +FSN R SG+IA+ L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGVVKKVSLDSFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLE-----------------------------KKQKVIALLV 746
E +VRAMGR+A GV G++L +V++L++
Sbjct: 710 AEKAVRAMGRTATGVRGIKLATTDISSEEIEEAEIVEIENEEAEESSVSLDTDRVVSLVI 769
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
+ +LT T+NG+GKRT+I EY +R TKG++SIK N+RNGKVVAA V +IM
Sbjct: 770 PRTEG-DILTVTQNGFGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEEADQIM 828
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LIT G L+RTRV+E+ +GR+TQGV +I + + V+R+C+
Sbjct: 829 LITDAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSVERVCE 873
>gi|381402198|ref|ZP_09927074.1| DNA gyrase subunit A [Kingella kingae PYKK081]
gi|380832806|gb|EIC12698.1| DNA gyrase subunit A [Kingella kingae PYKK081]
Length = 909
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/894 (51%), Positives = 636/894 (71%), Gaps = 56/894 (6%)
Query: 3 QFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRP 62
QFAKE I++ LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 8 QFAKETIAVSLEDEMKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNGA 67
Query: 63 FVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRY 122
+ K ARVVG+ +GKYHPHGD ++Y +VRMAQ FS+R TLVDGQGNFGS+DGD+AAAMRY
Sbjct: 68 YKKSARVVGDVIGKYHPHGDSAVYQTIVRMAQPFSMRYTLVDGQGNFGSVDGDAAAAMRY 127
Query: 123 TECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNI 182
TE R+ KI++E+L D++++T++F NYDG E+EP VLPTR P LL+NGS GIAVGMAT+I
Sbjct: 128 TEIRMEKIAHEMLADIEEDTVNFGDNYDGSEREPLVLPTRFPALLVNGSEGIAVGMATSI 187
Query: 183 PPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVII 242
PPHNL + + G L +L PE IN+LI II APDFPT IYGL+ + GY+TG+GRV+I
Sbjct: 188 PPHNLRDTLAGCLKLLREPETDINELIDIIKAPDFPTGATIYGLTGIRAGYHTGRGRVVI 247
Query: 243 RAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGM 301
R+KTHIE + R AII+DE+PYQVNK L+EKI LV++K +E I+ LRDESDK G
Sbjct: 248 RSKTHIEPIGKNGEREAIIVDEIPYQVNKSKLVEKIGDLVRDKAIEGIAELRDESDKDGT 307
Query: 302 RIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEV 361
RIVIELKRNE E++LN+LYK TQLQ+TFG+NM+ALV+GQP+LLNLK+IL F+ HR+EV
Sbjct: 308 RIVIELKRNENAEVILNQLYKLTQLQDTFGINMVALVDGQPRLLNLKQILSEFLRHRREV 367
Query: 362 IKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVS 421
+ RRT+F L+KAR HI EG +AL+NID I +I+ ++ + A+ ++ W VS
Sbjct: 368 VTRRTLFRLKKARAEGHIAEGKAVALSNIDEMIALIKQSADVETAREALLGRAWQSALVS 427
Query: 422 KIIGFNKKNYNTISK--INNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
+++ + + + LQ D Y LSD QA+ IL+M L+ LT ++Q +I+ +Y
Sbjct: 428 EMLSRSDLDLRMACPEWLPENRGLQ-ADGYWLSDEQARAILRMSLRNLTGLDQDEIVKEY 486
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI---NPSTE 536
++++ ++DL DIL+ +R+ +II DEL ++ ++G R+SEI NA+ + + E
Sbjct: 487 KDLMAVIVDLLDILAKPERVRQIIDDELVAMQTQFGDE----RKSEI--NAVGGGDIADE 540
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLI ++MV+TL++ GYIK+QP S+Y+AQKRGGRGK+A TKDED+I LF+ANTHDY++
Sbjct: 541 DLIPPREMVVTLTHGGYIKTQPTSDYQAQKRGGRGKQAAATKDEDFIETLFVANTHDYLM 600
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CF+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ ILP+ RDFP++ YVF
Sbjct: 601 CFTNLGKCHWIKVYRLPEGGRNSRGRPINNVIQLEENEKVSAILPV----RDFPEDEYVF 656
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
+T+LG+VKK LS F N GI A+ L + D L+G A T GS DIMLFS+ GKA+RFN
Sbjct: 657 FATTLGMVKKVQLSAFKNVSVKGIKAIALRDGDSLVGVAKTSGSSDIMLFSNLGKAIRFN 716
Query: 717 E--------------------------------------NSVRAMGRSARGVIGMRLEKK 738
E +R GR + G+ GM+L +
Sbjct: 717 EFYNPTSNDDDESEDVSGSLNDENSADDDNSSEFNLLTNKGIRPSGRGSGGLRGMKLPEN 776
Query: 739 QKVIALLVSN-NQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAAT 797
++++LLV+ VLTAT+NGYGKRT I++Y++ +G +GII+I T +RNG++V A
Sbjct: 777 GRIVSLLVAELGSDLQVLTATQNGYGKRTPIEDYSRKGKGGQGIIAIDTGERNGELVGAA 836
Query: 798 LVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LV+ ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ + L ++R+ +
Sbjct: 837 LVSPSDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGTTLVSIERVAE 890
>gi|26988498|ref|NP_743923.1| DNA gyrase subunit A [Pseudomonas putida KT2440]
gi|24983263|gb|AAN67387.1|AE016365_2 DNA gyrase, subunit A [Pseudomonas putida KT2440]
Length = 923
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/889 (49%), Positives = 629/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE +I++L++ IP PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTIDELMQHIPGPDFPTAGIINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++ALV+G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L + Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADSCRPEDLPEQYGLHDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG ++RR+EI+ + + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DVRRTEILNASHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS----NNKRDF------ 649
+ G++YW K ++IP+ SR +RG+P++N+ L+ E+IT +L + D
Sbjct: 596 SKGKVYWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELDE 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 AEDTVLEGELVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQR 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V
Sbjct: 776 IISMLIPESGSQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ + R+TQGV LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERI 883
>gi|307249501|ref|ZP_07531489.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306858494|gb|EFM90562.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 4
str. M62]
Length = 896
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/885 (51%), Positives = 625/885 (70%), Gaps = 46/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + SI +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEQISIEELMRFIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R II+ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTEK-GREQIIVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLARAWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLPENLGVRDGQ----YYLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L ILS+++R++E+I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYKALLTEIGELLRILSSAERLMEVIREELEKVKAEFGDE----RRTEITAASGDINMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKENDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G+VKK L +FSN R SG+IA+ L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGVVKKVSLDSFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSARGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLE-----------------------------KKQKVIALLV 746
E +VRAMGR+A GV G++L +V++L++
Sbjct: 710 AEKAVRAMGRTATGVRGIKLATTEISSEEIEEAEIVEIENEEAEESSVSLDTDRVVSLVI 769
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
+ +LT T+NG+GKRT+I EY +R TKG++SIK N+RNGKVVAA V +IM
Sbjct: 770 PRTEG-DILTVTQNGFGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEEADQIM 828
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LIT G L+RTRV+E+ +GR+TQGV +I + + V+R+C+
Sbjct: 829 LITDAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSVERVCE 873
>gi|414576841|ref|ZP_11434023.1| DNA gyrase, A subunit [Shigella sonnei 3233-85]
gi|391284594|gb|EIQ43189.1| DNA gyrase, A subunit [Shigella sonnei 3233-85]
Length = 850
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/859 (52%), Positives = 621/859 (72%), Gaps = 23/859 (2%)
Query: 26 MSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSI 85
MSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN+ + K ARVVG+ +GKYHPHGD ++
Sbjct: 1 MSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAV 60
Query: 86 YDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDF 145
YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAMRYTE RL KI++EL+ DL+KET+DF
Sbjct: 61 YDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDF 120
Query: 146 ISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSI 205
+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMATNIPPHNLTEVI+G L + + + SI
Sbjct: 121 VDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISI 180
Query: 206 NDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELP 265
L++ IP PDFPTA II G + + Y TG+G+V IRA+ +E + R II+ E+P
Sbjct: 181 EGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIP 240
Query: 266 YQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQ 325
YQVNK L+EKI++LVKEK++E IS LRDESDK GMRIVIE+KR+ + E+VLN LY QTQ
Sbjct: 241 YQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQ 300
Query: 326 LQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTI 385
LQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+EV+ RRTIFELRKAR+ AHILE L +
Sbjct: 301 LQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAV 360
Query: 386 ALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTISKINNISKLQN 445
AL NID I++IR TP EAK ++ + W L +V+ ++ + + +++
Sbjct: 361 ALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRD 420
Query: 446 NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITD 505
+Y L++ QAQ IL + LQ+LT +E +K++++Y+ ++ ++ +L IL ++ R++E+I +
Sbjct: 421 G-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIRE 479
Query: 506 ELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQ 565
EL +++ ++G RR+EI N+ + + EDLI +D+V+TLS+ GY+K QP+SEY AQ
Sbjct: 480 ELELVREQFGDK----RRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQ 535
Query: 566 KRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPII 625
+RGG+GK A K+ED+I++L +ANTHD+ILCFS+ GR+Y +KV+Q+P+ +R +RG+PI+
Sbjct: 536 RRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIV 595
Query: 626 NMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNL 685
N+ L+ E+IT ILP++ +F + VFM+T+ G VKKT+L+ F+ R +G +A+ L
Sbjct: 596 NLLPLEQDERITAILPVT----EFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKL 651
Query: 686 SNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALL 745
D LIG LT G ++MLFS GK VRF E+SVRAMG + GV G+RL + KV++L+
Sbjct: 652 VEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLI 711
Query: 746 VSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEI 805
V ++LTAT+NGYGKRT + EY +R TKG+ISIK +RNG VV A V+ +I
Sbjct: 712 VPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQI 770
Query: 806 MLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPV---- 861
M+IT G L+RTRVSEI +GR+TQGVILI + G+QR+ + PV
Sbjct: 771 MMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAE--------PVDEED 822
Query: 862 -ITIDGPTASGKGTVAQLV 879
TIDG A G +A V
Sbjct: 823 LDTIDGSAAEGDDEIAPEV 841
>gi|425278529|ref|ZP_18669775.1| DNA gyrase, A subunit [Escherichia coli ARS4.2123]
gi|408202105|gb|EKI27239.1| DNA gyrase, A subunit [Escherichia coli ARS4.2123]
Length = 850
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/859 (52%), Positives = 621/859 (72%), Gaps = 23/859 (2%)
Query: 26 MSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSI 85
MSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN+ + K ARVVG+ +GKYHPHGD ++
Sbjct: 1 MSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAV 60
Query: 86 YDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDF 145
YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAMRYTE RL KI++EL+ DL+KET+DF
Sbjct: 61 YDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDF 120
Query: 146 ISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSI 205
+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMATNIPPHNLTEVI+G L + + + SI
Sbjct: 121 VDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISI 180
Query: 206 NDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELP 265
L++ IP PDFPTA II G + + Y TG+G+V IRA+ +E + R II+ E+P
Sbjct: 181 EGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIP 240
Query: 266 YQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQ 325
YQVNK L+EKI++LVKEK++E IS LRDESDK GMRIVIE+KR+ + E+VLN LY QTQ
Sbjct: 241 YQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQ 300
Query: 326 LQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTI 385
LQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+EV+ RRTIFELRKAR+ AHILE L +
Sbjct: 301 LQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAV 360
Query: 386 ALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTISKINNISKLQN 445
AL NID I++IR TP EAK ++ + W L +V+ ++ + + +++
Sbjct: 361 ALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRD 420
Query: 446 NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITD 505
+Y L++ QAQ IL + LQ+LT +E +K++++Y+ ++ ++ +L IL ++ R++E+I +
Sbjct: 421 G-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIRE 479
Query: 506 ELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQ 565
EL +++ ++G RR+EI N+ + + EDLI +D+V+TLS+ GY+K QP+SEY AQ
Sbjct: 480 ELELVREQFGDK----RRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQ 535
Query: 566 KRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPII 625
+RGG+GK A K+ED+I++L +ANTHD+ILCFS+ GR+Y +KV+Q+P+ +R +RG+PI+
Sbjct: 536 RRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIV 595
Query: 626 NMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNL 685
N+ L+ E+IT ILP++ +F + VFM+T+ G VKKT+L+ F+ R +G +A+ L
Sbjct: 596 NLLPLEQDERITAILPVT----EFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKL 651
Query: 686 SNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALL 745
D LIG LT G ++MLFS GK VRF E+SVRAMG + GV G+RL + KV++L+
Sbjct: 652 VEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLI 711
Query: 746 VSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEI 805
V ++LTAT+NGYGKRT + EY +R TKG+ISIK +RNG VV A V+ +I
Sbjct: 712 VPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQI 770
Query: 806 MLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPV---- 861
M+IT G L+RTRVSEI +GR+TQGVILI + G+QR+ + PV
Sbjct: 771 MMITDAGTLVRTRVSEISIVGRNTQGVILIRTSEDENVVGLQRVAE--------PVDEED 822
Query: 862 -ITIDGPTASGKGTVAQLV 879
TIDG A G +A V
Sbjct: 823 LDTIDGSAAEGDDEIAPEV 841
>gi|165975741|ref|YP_001651334.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|165875842|gb|ABY68890.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 896
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/885 (51%), Positives = 624/885 (70%), Gaps = 46/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + I +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEQIGIEELMRFIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R I++ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTEK-GREQIVVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLARAWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLPENLGVRDSQ----YYLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L ILS+++R++E+I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYKALLTEIGELLRILSSAERLMEVIREELEKVKAEFGDE----RRTEITAASGDINMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ D+I +L IANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKENDFIEKLLIANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G+VKK L +FSN R SG+IA+ L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGVVKKVSLDSFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLE-----------------------------KKQKVIALLV 746
E +VRAMGR+A GV G++L +V++L++
Sbjct: 710 AEKAVRAMGRTATGVRGIKLATTDISSEEIEEAEIVEIENEEAEESSVSLDTDRVVSLVI 769
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
+ +LT T+NG+GKRT+I EY +R TKG++SIK N+RNGKVVAA V +IM
Sbjct: 770 PRTEG-DILTVTQNGFGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEEADQIM 828
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LIT G L+RTRV+E+ +GR+TQGV +I + + V+R+C+
Sbjct: 829 LITDAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSVERVCE 873
>gi|261400307|ref|ZP_05986432.1| DNA gyrase, A subunit [Neisseria lactamica ATCC 23970]
gi|269209927|gb|EEZ76382.1| DNA gyrase, A subunit [Neisseria lactamica ATCC 23970]
Length = 916
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/899 (51%), Positives = 623/899 (69%), Gaps = 64/899 (7%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTH E + R AI+IDE+PYQVNK L+EKI LV+EK LE IS LRDESDKSG
Sbjct: 250 IRAKTHTEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I++I+ + EAK K++ +W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESPNAAEAKEKLLSRSWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + + NI + Y LS+IQA IL+M L+ LT +++++I+
Sbjct: 430 EEMLTRSGLDLEMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDREEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP---- 533
Y+N++ K+ID DILS +RI II DEL IK YG + L+ INP
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITRIIRDELEEIKTNYGDER---------LSEINPFGGD 538
Query: 534 -STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+ EDLI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTH
Sbjct: 539 IADEDLIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DY++CF+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++
Sbjct: 599 DYLMCFTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPED 654
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVF +T+ GIVKK LS F N R GI A+ L D LIGAA T GS DIMLFS+ GKA
Sbjct: 655 QYVFFATAQGIVKKVRLSAFKNVRAQGIKAIALKEGDSLIGAAQTGGSDDIMLFSNLGKA 714
Query: 713 VRFNENSVRAMGRSAR-----------------------GVIGMR-------------LE 736
+RFNE ++ A G G+R L
Sbjct: 715 IRFNEYWEKSGNGEAEDADSETSDGIEDENADSENALPGGKYGVRPSGRGSGGMRGMRLP 774
Query: 737 KKQKVIALLV----SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGK 792
K+++L+ + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG
Sbjct: 775 ADGKIVSLITFAPEAGESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGD 834
Query: 793 VVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
+VAATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 835 LVAATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 893
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDF-LIGAALTDGSYDIMLFSDSGK 711
V +T+ G K+T ++++S K G IA+N + L+ A L + D+ML + G
Sbjct: 796 VLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGGV 855
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL-LVSNNQKQSVLT 756
+R +R GR+A GV + L++ + +++L V+ ++ +S L+
Sbjct: 856 LIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDEDESELS 901
>gi|46143842|ref|ZP_00133972.2| COG0188: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase
IV), A subunit [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|126207774|ref|YP_001052999.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|126096566|gb|ABN73394.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 896
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/885 (51%), Positives = 624/885 (70%), Gaps = 46/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + I +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEQIGIEELMRFIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R I++ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTEK-GREQIVVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLARAWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLPENLGVRDGQ----YYLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L ILS+++R++E+I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYKALLTEIGELLRILSSAERLMEVIREELEKVKAEFGDE----RRTEITAASGDINMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G+VKK L FSN R SG+IA+ L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGVVKKVSLDAFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLE-----------------------------KKQKVIALLV 746
E +VRAMGR+A GV G++L +V++L++
Sbjct: 710 AEKAVRAMGRTATGVRGIKLATTDISSEEIEEAEIVEIENEEADESSVSLDTDRVVSLVI 769
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
+ +LT T+NG+GKRT+I EY +R TKG++SIK N+RNGKVVAA V +IM
Sbjct: 770 PRTEG-DILTVTQNGFGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEEADQIM 828
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LIT G L+RTRV+E+ +GR+TQGV +I + + V+R+C+
Sbjct: 829 LITDAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSVERVCE 873
>gi|387772167|ref|ZP_10128126.1| DNA gyrase, A subunit [Haemophilus parahaemolyticus HK385]
gi|386907812|gb|EIJ72514.1| DNA gyrase, A subunit [Haemophilus parahaemolyticus HK385]
Length = 895
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/880 (51%), Positives = 627/880 (71%), Gaps = 38/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDRNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+AAAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+DF NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N E SI++L++ IP PDFPT +I G + D Y+TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEEISIDELMQYIPGPDFPTGALINGRKGIVDAYHTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + T II+ ELPYQVNK L++KI +L EKK+ IS ++D S +SG
Sbjct: 241 YVRAKATIETSAKGAET-IIVSELPYQVNKADLVKKIEELSDEKKITGISEVKDLSQRSG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
++I I++K + + E+VLN LY TQ+Q TFG+NM+AL NGQPK+LNLK+I+ FI HR+E
Sbjct: 300 IKIEIKVKSDAVAEVVLNHLYALTQMQVTFGINMVALDNGQPKVLNLKQIIAAFIKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR + T EA+ ++ +W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRHSKTADEAREGLLSRSWALGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ + Y LS++QA+ IL++ L RLT +E +KI+++Y+
Sbjct: 420 TAMLDAVGGDASRPEDLPEHLGVRDGEYY-LSEVQARAILELRLHRLTGLEHEKIVDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL+N++R++E+I +EL +K+ +G RR+EI + + + EDLIA
Sbjct: 479 ELLTEIAELLHILNNAERLMEVIREELETVKSSFGDE----RRTEITAASGDINIEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYVFMS 658
GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + +VFM+
Sbjct: 595 RGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFVFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G+VKK L FSN R +G+IA+ L + D LIG +T+G +IMLFS G+ VRF E
Sbjct: 653 TASGVVKKVALDAFSNVRANGLIALTLRDGDELIGVDITNGESEIMLFSAQGRVVRFEEK 712
Query: 719 SVRAMGRSARGVIGMRLEKKQ---------------------------KVIALLVSNNQK 751
+VRAMGR+A GV G++L K+ KV++L++ +
Sbjct: 713 AVRAMGRAATGVRGIKLATKEISDDVEEAEIVDIESEENDESINLNTDKVVSLVIPRAEG 772
Query: 752 QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTG 811
+LT T+NGYGKRT++ EY +R TKG++SIK N+RNGKVVAA V +IMLIT
Sbjct: 773 -DILTVTQNGYGKRTVLVEYPVKSRATKGVVSIKVNERNGKVVAAVQVEETDQIMLITDA 831
Query: 812 GILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
G L+RTRVSE+ +GR+TQGV +I ++ ++R+C+
Sbjct: 832 GTLVRTRVSEVSLVGRNTQGVRIIRTAEDEQVVSLERICE 871
>gi|115499631|dbj|BAF33489.1| DNA gyrase subunit A [Vibrio anguillarum]
Length = 907
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/880 (52%), Positives = 630/880 (71%), Gaps = 42/880 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAREITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV++G L ++N + +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLTEVVEGCLAYINNEDITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K I E + + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKADI-EVEKNGKETIIVREIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY QTQLQ TFG+NM+AL NG PKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGLPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARDRAHILEALALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL++ L RLT +E +KI++
Sbjct: 420 ASMLERAGTDAARPEWLEPEYGI----RDGKYFLTEQQAQAILELRLHRLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ +L IL++++R++E+I +EL +++ +G + RR+EI + E+
Sbjct: 476 EYKALLEEIAELMHILASTERLMEVIREELETVRDAFG----DARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+ +TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD+ILC
Sbjct: 532 LIAREDVAVTLSHAGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDHILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y LKV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F + ++FM
Sbjct: 592 FSTRGKTYRLKVYQLPLASRTARGKPIVNILPLEEGERITAILPVT----EFSDDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT LS+F+N R +G+IAVNL +D LIG +TDG+ +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLSSFANVRSNGLIAVNLREDDSLIGVDITDGNSEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VRAMGR+A GV GM+L + +V++L+V +N
Sbjct: 708 SEETPVLDENGQPVLDEHGQPEIKFKGVRAMGRTASGVRGMKLAEGDQVVSLIVPSNDG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
+LT T+NGYGKRT + EY R T+G++SIK ++RNG+V A E M+IT G
Sbjct: 767 DILTVTQNGYGKRTTLGEYPTKGRATQGVVSIKVSERNGQVAGAVQTEEGDEFMMITDAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
L+RTRV+E+ ++GR+TQGV LI + G+QR+ +I
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTLIRTAEDENVVGLQRIEEI 866
>gi|392954423|ref|ZP_10319974.1| DNA gyrase, A subunit [Hydrocarboniphaga effusa AP103]
gi|391857080|gb|EIT67611.1| DNA gyrase, A subunit [Hydrocarboniphaga effusa AP103]
Length = 906
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/884 (50%), Positives = 629/884 (71%), Gaps = 41/884 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKEV+S+ LE+EM +SYLDYAMSVIVGRALPD RDGLKPVHRR+L+AM ++NN+WN
Sbjct: 1 MTEFAKEVLSVNLEDEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRILYAMSQLNNVWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP++KCARVVG+ +GKYHPHGD + YDALVRMAQ FS+R LVDGQGNFGS+DGD AAAM
Sbjct: 61 RPYIKCARVVGDVIGKYHPHGDSAAYDALVRMAQDFSMRHVLVDGQGNFGSVDGDPAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTECR+ ++++E+L D+D ET+DF+ NYD K++EP VLPTR+P LL+NGS+GIAVG+AT
Sbjct: 121 RYTECRMARLTSEMLADIDSETVDFVPNYDEKDEEPVVLPTRVPQLLVNGSAGIAVGLAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG + V+ NP+ I L+++IPAPDFPTAG+I + + Y TG+GR+
Sbjct: 181 NIPPHNLSEVIDGCIAVIDNPDIDIAGLMQLIPAPDFPTAGLILDAHGLAEAYATGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+IRA+T E ++ AII+ ELPYQVNK L E+I++LVKEKK+E IS +RDESDK G
Sbjct: 241 VIRARTSFETVG-NDKQAIIVTELPYQVNKARLQERIAELVKEKKIEGISEIRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+ IELKR E ++VLN L++QTQLQ TFG+NM+AL GQPK L+LK +L F+ HR+E
Sbjct: 300 MRVYIELKRGENADVVLNNLFQQTQLQVTFGINMVALDGGQPKTLSLKSLLEIFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT + LRKARE AHILEGL +AL NID I++IRS+ EAK +++ TW+ V
Sbjct: 360 VVTRRTRYLLRKARERAHILEGLAVALANIDEMIELIRSSPNSAEAKQRMMARTWDAGLV 419
Query: 421 SKIIGFNKKNYNTISKIN---NISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ + + ++ I + +Y+LSD QA IL+M L RLT +EQ KI +
Sbjct: 420 TTLLAAADSSVSRPEDLSLEFGIVDNEGQAVYRLSDAQASAILEMRLSRLTGLEQDKIHD 479
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+++ ++ ++D DIL++ R++ +I EL IK +YG RR+EI A+N + ED
Sbjct: 480 EFKELLASILDYLDILASEPRLLGVIRGELLAIKEQYGEE----RRTEITTAALNMAQED 535
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA DMV+TLS+ GY+KS P++EY+AQKRGGRGK A K ED++++L++A+THD++LC
Sbjct: 536 LIAPMDMVVTLSHEGYVKSVPLAEYQAQKRGGRGKLATANKQEDFVDRLWVAHTHDWLLC 595
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F + G++Y L+V+++P GSR SRGKP +N+ L+ EKI+ +LP+ + + + Y+FM
Sbjct: 596 FGSTGKVYKLRVFELPTGSRGSRGKPFVNLLPLEQGEKISAVLPIKKFEDEPEQTRYIFM 655
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T LG VKKT L F+N R +GIIA++L +D L+G ALT G+ D+++FSD+G+ +RF+E
Sbjct: 656 ATRLGTVKKTELGAFANIRSNGIIALDLRVDDSLVGVALTTGNNDVLMFSDAGRVIRFSE 715
Query: 718 NSVRAMGRSARGVIGMRLEKKQ----------------------------KVIALLVSNN 749
N VR+MGR+A GV GMRL ++ ++IAL+V +
Sbjct: 716 NDVRSMGRTATGVRGMRLVRRDESSEESSEAPVIDGDIEVAEAAEDTAQAQIIALIVVSP 775
Query: 750 QKQS-----VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
+ + +LT +ENGYGKRT I+++ RG G+I+ + G ++ A V H+
Sbjct: 776 ETEGQAAPDILTVSENGYGKRTPIEQFPLRGRGGMGVIAQALTDKTGNLIGAIEVGDEHQ 835
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
+MLI+ LIR + +++R MGR+TQGV L+ +L V R
Sbjct: 836 VMLISESANLIRFKTTDVRSMGRNTQGVRLMKPNAGDRLVSVDR 879
>gi|167032370|ref|YP_001667601.1| DNA gyrase subunit A [Pseudomonas putida GB-1]
gi|166858858|gb|ABY97265.1| DNA gyrase, A subunit [Pseudomonas putida GB-1]
Length = 921
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/889 (49%), Positives = 628/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NP+ +I++L++ IP PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPDVTIDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++ALV+G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK ++ + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L + Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADSCRPEDLPEQYGLHDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG + RR+EI+ + + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DARRTEILNASHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS----NNKRDF------ 649
+ G++YW K ++IP+ SR +RG+P++N+ L+ E+IT +L + D
Sbjct: 596 SKGKVYWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELEE 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 ADDTVLEGELVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQR 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V
Sbjct: 776 IISMLIPESGSQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ + R+TQGV LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERI 883
>gi|307256314|ref|ZP_07538097.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|306865140|gb|EFM97040.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
Length = 896
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/885 (51%), Positives = 624/885 (70%), Gaps = 46/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + I +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEQIGIEELMRFIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R I++ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTEK-GREQIVVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLARAWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLPENLGVRDGQ----YYLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L ILS+++R++E+I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYKALLTEIGELLRILSSAERLMEVIREELEKVKAEFGDE----RRTEITAASGDINMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G+VKK L FSN R SG+IA+ L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGVVKKVSLDAFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLE-----------------------------KKQKVIALLV 746
E +VRAMGR+A GV G++L +V++L++
Sbjct: 710 AEKAVRAMGRTATGVRGIKLATTDISSEEIEEAEIVEIENEEAEESSVSLDTDRVVSLVI 769
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
+ +LT T+NG+GKRT+I EY +R TKG++SIK N+RNGKVVAA V +IM
Sbjct: 770 PRTEG-DILTVTQNGFGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEEADQIM 828
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LIT G L+RTRV+E+ +GR+TQGV +I + + V+R+C+
Sbjct: 829 LITDAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSVERVCE 873
>gi|303252524|ref|ZP_07338687.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307245101|ref|ZP_07527194.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|307247273|ref|ZP_07529322.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|307254056|ref|ZP_07535903.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307258512|ref|ZP_07540249.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
gi|302648492|gb|EFL78685.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306853990|gb|EFM86202.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306856246|gb|EFM88400.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|306862981|gb|EFM94928.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306867416|gb|EFM99267.1| DNA gyrase subunit A [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
Length = 896
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/885 (51%), Positives = 624/885 (70%), Gaps = 46/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + I +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEQIGIEELMRFIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R I++ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTEK-GREQIVVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLARAWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLPENLGVRDGQ----YYLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L ILS+++R++E+I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYKALLTEIGELLRILSSAERLMEVIREELEKVKAEFGDE----RRTEITAASGDINMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G+VKK L FSN R SG+IA+ L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGVVKKVSLDAFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLE-----------------------------KKQKVIALLV 746
E +VRAMGR+A GV G++L +V++L++
Sbjct: 710 AEKAVRAMGRTATGVRGIKLATTDISSEEIEEAEIVEIENEEADESSVSLDTDRVVSLVI 769
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
+ +LT T+NG+GKRT+I EY +R TKG++SIK N+RNGKVVAA V +IM
Sbjct: 770 PRTEG-DILTVTQNGFGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEEADQIM 828
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LIT G L+RTRV+E+ +GR+TQGV +I + + V+R+C+
Sbjct: 829 LITDAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSVERVCE 873
>gi|170720560|ref|YP_001748248.1| DNA gyrase subunit A [Pseudomonas putida W619]
gi|169758563|gb|ACA71879.1| DNA gyrase, A subunit [Pseudomonas putida W619]
Length = 923
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/889 (48%), Positives = 631/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTVDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I++ ELPYQ+NK L+EKI++LVK+KK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKDKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++AL++G+P++LNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALIDGRPRVLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EA+ +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAREALIATAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L++ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADSCRPEDLPEQYGLRDGKYY-LSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG + RR+EI+ + + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DARRTEILNASHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL--------SNNKRDF-- 649
+ G++YW K ++IP+ SR +RG+P++N+ L+ E+IT +L + ++ +
Sbjct: 596 SKGKVYWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQSADPDEELED 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 GDEGVIEGEVVEAEEIDEEEGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRTARGVRGMKLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V
Sbjct: 776 IISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ + R+TQGV LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERI 883
>gi|344199537|ref|YP_004783863.1| DNA gyrase subunit A [Acidithiobacillus ferrivorans SS3]
gi|343774981|gb|AEM47537.1| DNA gyrase, A subunit [Acidithiobacillus ferrivorans SS3]
Length = 845
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/846 (52%), Positives = 610/846 (72%), Gaps = 19/846 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE I + LE+EM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHEMNN WN
Sbjct: 1 MIAFAKETIPVSLEKEMRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHEMNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTMVRMAQDFSMRYPLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++E+L DL+KET+DF NYD KE EP V+P RIPNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMSRIAHEMLADLEKETVDFGPNYDEKEWEPLVMPARIPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI L ++ +PE S DL ++PAPDFPTAG I+G + + Y TG+GRV
Sbjct: 181 NIPPHNLTEVISACLALVDDPETSDEDLFTLVPAPDFPTAGFIHGRAGSIEAYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ E + NR +II+ ELPYQVNK L+E+I+++VKEK+LE IS+LRDESDKSG
Sbjct: 241 VMRARCEFETDKKTNRQSIIVSELPYQVNKARLIERIAEMVKEKRLEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IELKR+ ++VLN LY+ T +Q+ F +NM+AL++G P+ L L+++L FI HR+E
Sbjct: 301 MRIAIELKRDANADVVLNNLYQHTVMQSVFNINMVALLDGAPRTLGLRDLLQAFIQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FEL+KAR+ AHILEGL +AL N+D I +IR+ + P EAK +++ +W V
Sbjct: 361 VVTRRTVFELKKARDRAHILEGLAVALVNLDPLISLIRAAANPAEAKAQMLAKSWEPGMV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +Q D Y LS+ QAQ IL + L RLT +EQ KI ++Y
Sbjct: 421 AALL---------VERAEPSEGMQ-ADGYHLSETQAQAILDLRLHRLTGLEQDKIRDEYL 470
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L +IL + R++E+I +EL I+++YG + RRSEI+ + + STEDLI
Sbjct: 471 ALLDRIRELLEILGSKTRLMEVIREELVAIRDQYG----DARRSEIVADTGDISTEDLIT 526
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
++MV+T ++ GYIK+QP++ + AQ+RGG+GK A TK+ED++ ++F A+TH Y L FSN
Sbjct: 527 EEEMVVTFTHAGYIKAQPVTVFNAQRRGGKGKMATTTKEEDFVERMFCASTHAYCLFFSN 586
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++W KV+Q+PQ R ++GKPI+NM SL E+IT +LP+ RDF + +V M TS
Sbjct: 587 LGKVFWQKVYQLPQAGRGAKGKPIVNMLSLAPTERITAVLPV----RDFTEGQFVCMVTS 642
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT + +S PR GI A+NL D L+ L+DG + MLF+ G AVRF E
Sbjct: 643 HGVVKKTPVMEYSRPRSQGINAINLDPGDRLVAVGLSDGQREFMLFTRHGMAVRFPEAKA 702
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+ARGV G+ LE+ +VI+ ++ Q +LT T NGYGK T + EY + NRG KG
Sbjct: 703 RAMGRNARGVRGISLEENDRVISAQWVDS-SQVILTTTANGYGKLTEVDEYRRTNRGGKG 761
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+TN RNG VV A V E+ML++ G LIR ++ IR+ GR+ QGV LI +
Sbjct: 762 VIAIQTNARNGDVVGALAVTERDELMLVSDHGTLIRIAINSIRRTGRNAQGVRLINLGEG 821
Query: 841 SKLCGV 846
+L G+
Sbjct: 822 EQLAGL 827
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
V T G +K ++ F+ R+ G +A EDF+ + FS+ GK
Sbjct: 531 VVTFTHAGYIKAQPVTVFNAQRRGGKGKMATTTKEEDFVERMFCASTHAYCLFFSNLGKV 590
Query: 713 VRFNENSVRAMGRSARG---VIGMRLEKKQKVIALLVSNN--QKQSVLTATENGYGKRTL 767
+ GR A+G V + L +++ A+L + + Q V T +G K+T
Sbjct: 591 FWQKVYQLPQAGRGAKGKPIVNMLSLAPTERITAVLPVRDFTEGQFVCMVTSHGVVKKTP 650
Query: 768 IKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGR 827
+ EY++ ++GI +I + + ++VA L + E ML T G+ +R ++ R MGR
Sbjct: 651 VMEYSRPR--SQGINAINLDPGD-RLVAVGLSDGQREFMLFTRHGMAVRFPEAKARAMGR 707
Query: 828 STQGVILITVENKSKLCGVQ 847
+ +GV I++E ++ Q
Sbjct: 708 NARGVRGISLEENDRVISAQ 727
>gi|404380035|ref|ZP_10985081.1| DNA gyrase subunit A [Simonsiella muelleri ATCC 29453]
gi|294482427|gb|EFG30120.1| DNA gyrase subunit A [Simonsiella muelleri ATCC 29453]
Length = 911
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/892 (51%), Positives = 635/892 (71%), Gaps = 54/892 (6%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
QFAKE I++ LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 7 QQFAKETIAVSLEDEMKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 66
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K ARVVG+ +GKYHPHGD ++Y +VRMAQ FS+R LVDGQGNFGS+DGD+AAAMR
Sbjct: 67 AYKKSARVVGDVIGKYHPHGDSAVYQTIVRMAQPFSMRYMLVDGQGNFGSVDGDAAAAMR 126
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D++++T++F NYDG E+EP VLPTR P LL+NGS GIAVGMAT+
Sbjct: 127 YTEIRMAKIAHEMLADIEEDTVNFGDNYDGSEREPLVLPTRFPALLVNGSEGIAVGMATS 186
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + + G L +L PE INDLI II APDFPT IYGL+ + GY TG+GRV+
Sbjct: 187 IPPHNLRDTLSGCLKLLREPETDINDLIDIIKAPDFPTGATIYGLTGIRAGYQTGRGRVV 246
Query: 242 IRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGM 301
IR+KTHIE + N AII+DE+PYQVNK L+EKI +L++EK +E I+ LRDESDK G
Sbjct: 247 IRSKTHIEPIGK-NSEAIIVDEIPYQVNKSKLVEKIGELMREKTVEGIAELRDESDKDGT 305
Query: 302 RIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEV 361
RIVIELKRNE E++LN+LYK TQLQ++F +NM+ALV+GQP+LLNLK+IL F+ HR+EV
Sbjct: 306 RIVIELKRNENAEVILNQLYKLTQLQDSFSINMVALVDGQPRLLNLKQILSEFLRHRREV 365
Query: 362 IKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVS 421
+ RRT++ L+KAR HI EG +AL+NID I +I+ + A+ ++ W VS
Sbjct: 366 VTRRTLYRLKKARAEGHIAEGKAVALSNIDEMIALIKQSVDVDSAREALLSRAWQSDLVS 425
Query: 422 KIIGFNKKNYN-TISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ N+ + + T+++ + + LQ +D Y LSD QA+ IL+M L+ LT ++Q +II
Sbjct: 426 EML--NRSDLDLTMARPEWLPENRGLQ-SDGYWLSDEQARAILRMSLRNLTGLDQDEIIK 482
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEI-ILNAINPSTE 536
+Y+ ++ ++DL DIL+ +R+ +II DEL ++ ++G RRSEI + + E
Sbjct: 483 EYKELMAIIVDLLDILAKPERVRQIIDDELVAMQTQFGDE----RRSEINTFGGGDIADE 538
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLI ++MV+TL++ GYIK++P S+Y+AQKRGGRGK+A TKDED+I LF+ANTHDY++
Sbjct: 539 DLIPPREMVVTLTHGGYIKTRPTSDYQAQKRGGRGKQAAATKDEDFIETLFVANTHDYLM 598
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CF+N GR +W+KV+++P+G R SRG+PI N+ L+ EK++ ILP+ RDFP++ YVF
Sbjct: 599 CFTNLGRCHWIKVYRLPEGGRQSRGRPINNVIQLEENEKVSAILPV----RDFPEDEYVF 654
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
+T+LG+VKK LS F N GI A+ L + D L+G A T GS DIMLFS+ GKA+RFN
Sbjct: 655 FATALGVVKKVQLSAFKNVSVKGIKAIALKDGDSLVGVAKTSGSSDIMLFSNLGKAIRFN 714
Query: 717 E------------------------------------NSVRAMGRSARGVIGMRLEKKQK 740
E +R GR + G+ GMRL + +
Sbjct: 715 EFYNPTSNDDDESEDVSGSLNDDSDDENSDEFNLLTNKGIRPSGRGSGGLRGMRLPENGR 774
Query: 741 VIALLVSN-NQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLV 799
+++LLV+ VLTAT+NGYGKRT I+ Y++ +G +GII+I T +RNG++V A LV
Sbjct: 775 IVSLLVAELGSDLQVLTATQNGYGKRTPIENYSRKGKGGQGIIAIDTGERNGELVGAALV 834
Query: 800 NRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
+ ++MLIT+GG+LIRT+V ++R+ GR+ QGV LI ++ + L ++R+ +
Sbjct: 835 SPSDDLMLITSGGVLIRTKVEQVRETGRAAQGVRLINLDEGTTLVSIERVAE 886
>gi|359299463|ref|ZP_09185302.1| DNA gyrase subunit A [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304393|ref|ZP_10823463.1| DNA gyrase, A subunit [Haemophilus sputorum HK 2154]
gi|400377981|gb|EJP30846.1| DNA gyrase, A subunit [Haemophilus sputorum HK 2154]
Length = 897
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/882 (51%), Positives = 626/882 (70%), Gaps = 40/882 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + S+ +L+ IP PDFPT II G + + Y +G+G+V
Sbjct: 181 NIPPHNLGEVLDGCLAYIENEQISLEELMHFIPGPDFPTGAIINGRKGIEEAYRSGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E ++ R I++ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTDK-GREQIVVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL NGQPK+LNLK+I+ F+ HR+E
Sbjct: 300 IAIVIEIKRDAVGEVVLNHLYALTQMQVTFGINMVALDNGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I +IR + T +EA+ ++ +W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIALIRQSKTAEEAREGLLSRSWSLGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ + Y LS+ QA+ IL++ L RLT +E +KI+ +Y+
Sbjct: 420 AAMLEAAGVDASRPEDLPENFGIRDGEYY-LSEAQARAILELRLHRLTGLEHEKIVEEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL+++ R++E+I +EL +K ++G R +EI + + + EDLIA
Sbjct: 479 ELLTEIAELLHILNSADRLMEVIREELERVKAEFGDE----RCTEITAASGDINIEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYVFMS 658
GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + +VFM+
Sbjct: 595 RGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFVFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G+VKK L FSN R SG+IA+ L D LIG +T+G +IMLFS G+ VRF E
Sbjct: 653 TASGVVKKVTLDAFSNVRSSGLIALKLREGDELIGVDITNGESEIMLFSAQGRVVRFEEK 712
Query: 719 SVRAMGRSARGVIGMRLEK-----------------------------KQKVIALLVSNN 749
+VRAMGR+A GV G++L KV++L++ +N
Sbjct: 713 AVRAMGRTATGVRGIKLATTEISSEEIEEAEIVDLENEEAEESAVNLNTDKVVSLVIPHN 772
Query: 750 QKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLIT 809
+ + +LT T+NG+GKRT + EY +R TKG++SIK N+RNGKVVAA V +IMLIT
Sbjct: 773 EGE-ILTVTQNGFGKRTALSEYPIKSRATKGVVSIKVNERNGKVVAAVQVEEADQIMLIT 831
Query: 810 TGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
G L+RTRV+E+ +GR+TQGV +I + + ++R+C+
Sbjct: 832 DAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSLERVCE 873
>gi|349574821|ref|ZP_08886754.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Neisseria shayeganii
871]
gi|348013609|gb|EGY52520.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Neisseria shayeganii
871]
Length = 926
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/901 (50%), Positives = 625/901 (69%), Gaps = 65/901 (7%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
+QFAKE I + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 7 HQFAKETIPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 66
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR VDGQGNFGS+DGD AAAMR
Sbjct: 67 AYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMFVDGQGNFGSVDGDGAAAMR 126
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ +I++E+L D+++ET+DF NYDG E EP +LP R+P+LL+NGSSGIAVGMATN
Sbjct: 127 YTEIRMARIAHEMLADIEEETVDFGPNYDGSEHEPLILPARVPSLLVNGSSGIAVGMATN 186
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + +D L +L + + I +LI +I APDFPT IYG++ V +GY+TG+GRV+
Sbjct: 187 IPPHNLNDTVDACLKLLEDGDTDIEELINLIKAPDFPTGATIYGMAGVREGYHTGRGRVV 246
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAKTHIE + R AII+DE+PYQVNK L+EKI +LV+EK +E IS LRDESDKSG
Sbjct: 247 MRAKTHIEPIGKNGEREAIIVDEIPYQVNKAKLVEKIGELVREKTVEGISELRDESDKSG 306
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 307 MRIVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILREFLRHRRE 366
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR+ HI EG +AL+NID I +I++++ + A+ ++ W
Sbjct: 367 VVTRRTLFRLKKARQEGHIAEGKAVALSNIDEMIALIKASADVEAAREALLARPWR---- 422
Query: 421 SKIIGFNKKNYNTISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKI 475
S+++ + ++ L N D Y LSD QA+ IL+M L+ LT ++Q +I
Sbjct: 423 SQLVADMLSRTDLDLRMARPEGLPENRGLHADGYWLSDEQARAILRMSLRNLTGLDQDEI 482
Query: 476 INKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPST 535
+ +Y++++ +IDL DIL+ +RI +I+ DEL +K ++G RRSEI + +
Sbjct: 483 VREYKDIMAAIIDLLDILAKPERIRQIMQDELIAVKAQFGDE----RRSEINPFGGDIAD 538
Query: 536 EDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYI 595
EDLI +DMV+TL++ GYIK+QP S+Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY+
Sbjct: 539 EDLIPPRDMVVTLTHSGYIKTQPTSDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYL 598
Query: 596 LCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYV 655
+CF+N GR +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + RDFP + YV
Sbjct: 599 MCFTNLGRCHWIKVYRLPEGGRNSRGRPINNVIQLEENEKVSAILAV----RDFPADQYV 654
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
F +T+ G+VKK LS F N GI A+ + D L+G A T GS DIMLFS+ GKA+RF
Sbjct: 655 FFATAQGMVKKVQLSAFKNVSSKGIKAIAMKEGDSLVGVARTSGSDDIMLFSNLGKAIRF 714
Query: 716 NE---------------------------------NSVRAMGRSARGV----------IG 732
NE ++ + + +GV G
Sbjct: 715 NEYWEKSAEAEHDGSDDDSPLSGSPNEAEDAEHDSDADHGVAAANKGVRPSGRGSGGLRG 774
Query: 733 MRLEKKQKVIALLV----SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
MRL ++++L+ + VLTAT GYGKRT I +Y++ +G +G I+I T +
Sbjct: 775 MRLPADGRIVSLITFAPECEQGEPQVLTATAKGYGKRTPIADYSRKGKGGQGNIAINTGE 834
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
RNG +VAATLV ++MLIT+GG+LIRT+V++IR+ GR+ GV LI ++ L ++R
Sbjct: 835 RNGDLVAATLVAESDDLMLITSGGVLIRTKVAQIRETGRAAAGVKLINLDEGETLVSLER 894
Query: 849 L 849
+
Sbjct: 895 V 895
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDF-LIGAALTDGSYDIMLFSDSGK 711
V +T+ G K+T ++++S K G IA+N + L+ A L S D+ML + G
Sbjct: 800 VLTATAKGYGKRTPIADYSRKGKGGQGNIAINTGERNGDLVAATLVAESDDLMLITSGGV 859
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYG 763
+R +R GR+A GV + L++ + +++L + + ++ ENG G
Sbjct: 860 LIRTKVAQIRETGRAAAGVKLINLDEGETLVSLERVDEEPEAE-NGCENGAG 910
>gi|325276957|ref|ZP_08142639.1| DNA gyrase subunit A [Pseudomonas sp. TJI-51]
gi|324097912|gb|EGB96076.1| DNA gyrase subunit A [Pseudomonas sp. TJI-51]
Length = 921
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/889 (49%), Positives = 628/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLSDLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ NPE ++++L++ IP PDFPTAGII G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPEVTVDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ +E+ ++ R I+I ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++ALV+G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + L + Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGAEACRPEDLPEQYGLHDGK-YFLSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L IL++++R++E+I +EL I+ +YG + RR+EI+ + + + D+I
Sbjct: 480 QEILEQIGELIRILNSAERLMEVIREELEAIRAEYG----DARRTEILNASHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLS----NNKRDF------ 649
+ G++YW K ++IP+ SR +RG+P++N+ L+ E+IT +L + D
Sbjct: 596 SKGKVYWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQVDLEALQQNADLDEELED 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 ADDTVLEGELVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQQ 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG ++ A V+
Sbjct: 776 IISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVH 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ + R+TQGV LI + L G++R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERI 883
>gi|33152761|ref|NP_874114.1| DNA gyrase subunit A [Haemophilus ducreyi 35000HP]
gi|33148985|gb|AAP96503.1| DNA gyrase subunit A [Haemophilus ducreyi 35000HP]
Length = 900
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/889 (51%), Positives = 633/889 (71%), Gaps = 49/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDRNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + SI +L++ IP PDFPT II G + D Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENDQLSIEELMRFIPGPDFPTGAIINGRKGIEDAYCTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E+ + NR II+ ELPYQVNK L+EKI++LVK+KK++ IS+++D SDK G
Sbjct: 241 YVRAKATVEKTEK-NREQIIVTELPYQVNKAKLIEKIAELVKDKKIDGISSIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEIKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR + T +EA+ +++ W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRQSKTAEEARLALLDRAWSLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + ++ + +N Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLA----VELGVHNGEYHLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++++R++++I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYKQLLTEIGELLHILNSAERLMQVIREELEKVKAEFGDE----RRTEITAASGDINLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ K +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIP--KGEFSTDKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ GIVKK L FS+ R SG+I + L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGIVKKVCLDAFSHIRSSGLITLKLREGDELIGVDITDGGSEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRL------------------EKKQ------------KVIALL 745
E +VR+MGR+A GV G++L E+++ +V++L+
Sbjct: 710 AEKAVRSMGRTATGVRGIKLATSDILADDIEDTEIVEIEQEETEDNTAVNLNIDRVVSLV 769
Query: 746 VSNNQ---KQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRY 802
+ +LT TENGYGKRT++ EY +R TKG++SIK N+RNGKVVAA V+
Sbjct: 770 IPRADIATSGDILTVTENGYGKRTVLTEYPIKSRATKGVLSIKVNERNGKVVAAVQVDEL 829
Query: 803 HEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
+IMLIT G L+RTRV+E+ +GR+TQGV +I K+ ++RLC+
Sbjct: 830 DQIMLITDAGTLVRTRVAEVSLVGRNTQGVRIIRTAEDEKVVSLERLCE 878
>gi|225025685|ref|ZP_03714877.1| hypothetical protein EIKCOROL_02587 [Eikenella corrodens ATCC
23834]
gi|224941578|gb|EEG22787.1| hypothetical protein EIKCOROL_02587 [Eikenella corrodens ATCC
23834]
Length = 915
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/887 (52%), Positives = 623/887 (70%), Gaps = 50/887 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FAKE I + LEEEM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 7 HRFAKETIPVSLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 66
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R LVDGQGNFGS+DGD AAAMR
Sbjct: 67 SYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYMLVDGQGNFGSVDGDGAAAMR 126
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D++++T++F NYDG E+EP V+PTR P+LL NGS+GIAVGMATN
Sbjct: 127 YTEIRMAKIAHEMLADIEEDTVNFGPNYDGSEQEPLVMPTRFPSLLTNGSAGIAVGMATN 186
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + +D L +L +P+ SI+ LI I APDFPT IYGL+ V +GY TG+GRV+
Sbjct: 187 IPPHNLGDTVDACLQLLADPDTSIDALIDTIKAPDFPTGATIYGLAGVREGYRTGRGRVV 246
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R KTHIE + R AIIIDE+PYQVNK L+EKI +LV+EK LE IS+LRDESDKSG
Sbjct: 247 MRGKTHIEPIGKHGEREAIIIDEIPYQVNKAKLVEKIGELVREKTLEGISDLRDESDKSG 306
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK TQLQ++FG+NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 307 MRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILAEFLRHRRE 366
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID IQ+I+ ++ +AK K++ W V
Sbjct: 367 VVTRRTLFRLKKARHEGHIAEGKAVALSNIDPMIQLIKESADAAKAKAKLLARPWQSGLV 426
Query: 421 SKIIGFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++ + N L D Y LSD+QA IL+M L+ LT ++Q I+ Y
Sbjct: 427 GDMLSRTDLDLNMARPEGLPENLGLREDGYYLSDLQADAILRMSLRNLTGLDQDTILADY 486
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ ++ ++ID DIL+ +RI +II DEL IK +G + RRSEI + + EDLI
Sbjct: 487 KTIMAQIIDFLDILAKPERITQIIHDELIEIKTNFG----DPRRSEINPFGGDIADEDLI 542
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTHDY++CF+
Sbjct: 543 PPREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFT 602
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
N+GR +W+KV+++P+G RNSRG+PI N+ L EK++ ILP+ RDFP++ YVF +T
Sbjct: 603 NHGRCHWIKVYKLPEGGRNSRGRPINNVIQLDENEKVSAILPV----RDFPEDEYVFFAT 658
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
++G+VKK LS F N K GI A+ L D L+G A T G DIMLFS+ GKA+RFNE
Sbjct: 659 AMGVVKKVQLSAFKNVSKVGIKAIALKEGDSLVGVARTSGRNDIMLFSNLGKAIRFNEYW 718
Query: 718 ----------------------------------NSVRAMGRSARGVIGMRLEKKQKVIA 743
+ VR GR + G+ GMRL + ++++
Sbjct: 719 ERSSDDEETGDDNDTEISGSQEDDNAESAPISGKHGVRPSGRGSGGLRGMRLPENGRIVS 778
Query: 744 LLV----SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLV 799
L+ + VLTAT NGYGKRT I Y++ N+G +G I+I T +RNG +VAATLV
Sbjct: 779 LITFAPECEQSELQVLTATANGYGKRTPIASYSRKNKGGQGNIAINTGERNGDLVAATLV 838
Query: 800 NRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
+ ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L +
Sbjct: 839 SESDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSL 885
>gi|104780668|ref|YP_607166.1| DNA gyrase subunit A [Pseudomonas entomophila L48]
gi|95109655|emb|CAK14356.1| DNA gyrase, subunit A, type II topoisomerase [Pseudomonas
entomophila L48]
Length = 920
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/889 (49%), Positives = 629/889 (70%), Gaps = 46/889 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE++ + +E+E+ +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM E+ N WN
Sbjct: 1 MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGD+AAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ K+++ELL DL KET+D++ NYDG E+ P+V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L ++ N + ++++L++ IP PDFPTAG+I G + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDGCLALIDNSDITVDELMQFIPGPDFPTAGLINGRQGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNR-ENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RA++ IE+ ++ R I++ ELPYQ+NK L+EKI++LVKEKK+E I+ LRDESDK
Sbjct: 241 YMRARSEIEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
GMRIVIEL+R E+PE+VLN LY+QTQLQ+ FG+N++AL++G+P+LLNLK++L F+ HR+
Sbjct: 301 GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINIVALIDGRPRLLNLKDLLEAFVRHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKARE HILEG +AL+NID I +I+++ TP EAK +I + W
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTAWESSA 420
Query: 420 VSKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
V ++ + + L+ Y LS QAQ IL + L RLT +E +K++ +Y
Sbjct: 421 VQVMVERAGADSCRPEDLPEQYGLREGKYY-LSPEQAQAILDLRLHRLTGLEHEKLLAEY 479
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ +++++ +L ILS+++R++E+I +EL I+ +YG + RR+EI+ + + D+I
Sbjct: 480 QEILEQIGELIRILSSAERLMEVIREELEAIRAEYG----DARRTEILDARHDLNYGDMI 535
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
++ V+T+S+ GY K+QP+S Y+AQ+RGG+GK A KDED+I L +AN+H +L FS
Sbjct: 536 PEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFS 595
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPL--------SNNKRDF-- 649
+ G++YWLK + IP+ SR +RG+P++N+ L+ E+IT +L + ++ + +
Sbjct: 596 SKGKVYWLKTYDIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQHADPEEELED 655
Query: 650 -----------------------------PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGI 680
P Y+FM+T+ G VKKT L F+ PR +G+
Sbjct: 656 GDDGVIEGELVEVEEADEEDGDTPEWAAEPTGAYIFMATASGTVKKTPLVQFARPRSNGL 715
Query: 681 IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQK 740
IA+ L D LI AA+TDG+ ++M+FSD+GK +RF E+ VR MGR+ARGV GM+L K Q+
Sbjct: 716 IALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRTARGVRGMKLGKGQR 775
Query: 741 VIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVN 800
+I++L+ + Q +LTA+E G+GKRT + ++ + RG +G+I++ T RNG + A V
Sbjct: 776 IISMLIPESGAQ-ILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLTGAIQVQ 834
Query: 801 RYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
EIMLI+ G L+RTRV E+ +GR+TQGV LI + L GV+R+
Sbjct: 835 EGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLAADETLVGVERV 883
>gi|261491600|ref|ZP_05988183.1| DNA gyrase subunit A [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261312726|gb|EEY13846.1| DNA gyrase subunit A [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 898
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/883 (51%), Positives = 623/883 (70%), Gaps = 41/883 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++I + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTYN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+DF NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + S+ +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLGEVLDGCLAYIENEQISVEELMRYIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E ++ R I++ ELPYQVNK L+EKI++LVKEKK+E IS + D SDK G
Sbjct: 241 YVRAKASVETTDK-GREQIVVTELPYQVNKAKLIEKIAELVKEKKIEGISKIDDYSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL NGQPK+LNL++I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDNGQPKVLNLRQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T +EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRASKTAEEAREGLLARPWALGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ + Y LS+ QA+ IL++ L RLT +E +KI+ +Y+
Sbjct: 420 APMLEAAGVGASRPEDLPEHLGVRDGEYY-LSEAQARAILELRLHRLTGLEHEKIVEEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL +K + RR+EI + + + EDLIA
Sbjct: 479 ELLTEIGELIHILTSPERLMEVIREELERVKTDFNDE----RRTEITAASGDINIEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K +D+I +L +ANT D ILCFS+
Sbjct: 535 QEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKKDDFIEKLLVANTRDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYVFMS 658
GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++FM+
Sbjct: 595 RGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFIFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G+VKK L FSN R SG+IA+ L D LIG +TDG+ +IMLFS G+ VRF E
Sbjct: 653 TASGVVKKVSLDAFSNVRASGLIALKLREGDELIGVDITDGNSEIMLFSAQGRVVRFAET 712
Query: 719 SVRAMGRSARGVIGMRLEK------------------------------KQKVIALLVSN 748
+VRAMGR+A GV G++L K +V++L++
Sbjct: 713 AVRAMGRTATGVRGIKLSTTEISSEEIEEAEIIETDNEEAEDSSSVSLDKDRVVSLVIPR 772
Query: 749 NQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
+ +LT T+NGYGKRT+I EY +R TKG++SIK N+RNGKVVAA V +IMLI
Sbjct: 773 TEG-DILTVTQNGYGKRTVISEYPVKSRATKGVVSIKVNERNGKVVAAVQVEETDQIMLI 831
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
T G L+RTRV+E+ +GR+TQGV +I ++ ++R+C+
Sbjct: 832 TDAGTLVRTRVAEVSLVGRNTQGVRIIRTAEDEQVVSLERVCE 874
>gi|167856405|ref|ZP_02479129.1| DNA gyrase subunit A [Haemophilus parasuis 29755]
gi|167852465|gb|EDS23755.1| DNA gyrase subunit A [Haemophilus parasuis 29755]
Length = 888
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/887 (51%), Positives = 629/887 (70%), Gaps = 47/887 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++I I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + N+ +
Sbjct: 1 MSELAKDIIPISIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQSGNVSS 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPYVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+DF NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV++G L + N + +I +L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 181 NIPPHNLNEVLNGCLAYIENEQITIEELMQHIPGPDFPTAAIINGRKGIEDAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E ++ R I++ ELPYQVNKK+L+EKI++LV++K++E IS++ D SDK G
Sbjct: 241 YVRAKASVETTSK-GREQIVVTELPYQVNKKNLIEKIAELVRDKRIEGISSIEDYSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+K N + E+VLN LY TQ+Q TFG+NM+AL +GQPK+ NLK+I+ F++HR+E
Sbjct: 300 ISIVIEIKNNAVGEVVLNNLYALTQMQVTFGINMVALDHGQPKIFNLKQIIEAFVMHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILEGL IAL NID I++IR++ T EA+ +++ W+L +V
Sbjct: 360 VVTRRTVFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLDRPWSLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + ++ + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLASEFGVRDGQ----YYLSEDQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++S+R++E+I +EL IK ++G RR+EI + + + ED
Sbjct: 476 EYKELLVEISELLHILNSSERLMEVIREELEKIKAEFGDE----RRTEITAASGDINLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L E+IT ILP+ N +F + ++
Sbjct: 592 FSSCGRLYQLKVYQLPQASRGARGTPIVNILPLVKGENERITAILPVPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G VKK L FSN R SG+IA+ L D LIG +T+G +IMLFS G+ VRF
Sbjct: 650 FMATASGTVKKVSLDAFSNVRSSGLIALKLREGDELIGVDITNGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLEKKQ------------------------------KVIALL 745
E +VR MGR A GV G++L + KV++L+
Sbjct: 710 AETAVRGMGRVATGVRGIKLATTEISVDDAEEVDIETVENEEAEEASSVNLTTDKVVSLV 769
Query: 746 VSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEI 805
+ + Q + +LT T+NGYGKRT + EY +R TKG++SIK N+RNGKVVAA V +I
Sbjct: 770 IPHTQGE-ILTVTQNGYGKRTALGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEENDQI 828
Query: 806 MLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
MLIT G L+RTRV+E+ +GR+TQGV +I + ++R+C+I
Sbjct: 829 MLITDAGTLVRTRVNEVSLVGRNTQGVRIIRTAEDEHVVSLERICEI 875
>gi|192382554|gb|ACF04298.1| GyrA [Neisseria lactamica]
Length = 912
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/899 (51%), Positives = 622/899 (69%), Gaps = 64/899 (7%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
++FA E + + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 10 HKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNA 69
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ+F++R L+DGQGNFGS+DG +AAAMR
Sbjct: 70 AYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMR 129
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KIS+E+L D+++ET++F NYDG E EP VLPTR P LL+NGSSGIAVGMATN
Sbjct: 130 YTEIRMAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSSGIAVGMATN 189
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL++ ++ L +L P+ I++LI II APDFPT IYGLS V +GY TG+GRV+
Sbjct: 190 IPPHNLSDTVNACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVV 249
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAKTH E + R AI+IDE+PYQVNK L+EKI +LV+EK LE IS LRDESDKSG
Sbjct: 250 IRAKTHTEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGISELRDESDKSG 309
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELKRNE E+VLN+LYK T LQ++FG+NM+ LV+GQP+LLNLK+IL F+ HR+E
Sbjct: 310 MRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRRE 369
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL++ID I++I+ + EAK K++ +W V
Sbjct: 370 VVTRRTLFRLKKARHEGHIAEGKAVALSDIDEIIRLIKESPNAAEAKEKLLSRSWRSSLV 429
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+++ G + NI + Y LS+IQA IL+M L+ LT +++++I+
Sbjct: 430 EEMLTRSGLDLGMMRPEGLAANIGLKEQG--YYLSEIQADAILRMSLRNLTGLDREEIVE 487
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINP---- 533
Y+N++ K+ID DILS +RI II DEL IK YG + L+ INP
Sbjct: 488 SYKNLMGKIIDFVDILSKPERITRIIRDELEEIKTNYGDER---------LSEINPFGGD 538
Query: 534 -STEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTH 592
+ EDLI ++MV+TL++ GYIK+QP ++Y+AQ+RGGRGK+A TKDED+I LF+ANTH
Sbjct: 539 IADEDLIPQREMVVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTH 598
Query: 593 DYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKN 652
DY++CF+N G+ +W+KV+++P+G RNSRG+PI N+ L+ EK++ IL + R+FP++
Sbjct: 599 DYLMCFTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAV----REFPED 654
Query: 653 NYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
YVF +T+ GIVKK LS F N R GI A+ L D LIGAA T GS DIMLFS+ GKA
Sbjct: 655 QYVFFATAQGIVKKVRLSAFKNVRAQGIKAIALKEGDSLIGAAQTGGSDDIMLFSNLGKA 714
Query: 713 VRFNENSVRAMGRSAR-----------------------GVIGMR-------------LE 736
+RFNE ++ A G G+R L
Sbjct: 715 IRFNEYWEKSGNGEAEDADSETSDGIEDENADSENALPGGKYGVRPSGRGSGGMRGMRLP 774
Query: 737 KKQKVIALLV----SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGK 792
K+++L+ + VLTAT NGYGKRT I +Y++ N+G +G I+I T +RNG
Sbjct: 775 ADGKIVSLITFPAEAGESGLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGD 834
Query: 793 VVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
+VAATLV ++MLIT+GG+LIRT+V +IR+ GR+ GV LI ++ L ++R+ +
Sbjct: 835 LVAATLVGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAE 893
Score = 44.7 bits (104), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDF-LIGAALTDGSYDIMLFSDSGK 711
V +T+ G K+T ++++S K G IA+N + L+ A L + D+ML + G
Sbjct: 796 VLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGGV 855
Query: 712 AVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL-LVSNNQKQSVLTATENGYGKRT 766
+R +R GR+A GV + L++ + +++L V+ + ++ + TE G T
Sbjct: 856 LIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEEETETDMPETEAGTSPET 911
>gi|219870281|ref|YP_002474656.1| DNA gyrase subunit A [Haemophilus parasuis SH0165]
gi|219690485|gb|ACL31708.1| DNA gyrase subunit A [Haemophilus parasuis SH0165]
Length = 888
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/887 (51%), Positives = 630/887 (71%), Gaps = 47/887 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++I I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + N+ +
Sbjct: 1 MSELAKDIIPISIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQSGNVSS 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+VK ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPYVKSARVVGDVIGKYHPHGDFAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+DF NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV++G L + N + +I +L++ IP PDFPTA II G + D Y TG+G+V
Sbjct: 181 NIPPHNLNEVLNGCLAYIENEQITIEELMQHIPGPDFPTAAIINGRKGIEDAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E ++ R I++ ELPYQVNKK+L+EKI++LV++K++E IS++ D SDK G
Sbjct: 241 YVRAKASVETTSK-GREQIVVTELPYQVNKKNLIEKIAELVRDKRIEGISSIEDYSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+K N + E+VLN LY TQ+Q TFG+NM+AL +GQPK+ NLK+I+ F++HR+E
Sbjct: 300 ISIVIEIKNNAVGEVVLNNLYALTQMQVTFGINMVALDHGQPKIFNLKQIIEAFVMHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKARE AHILEGL IAL NID I++IR++ T EA+ +++ W+L +V
Sbjct: 360 VVTRRTVFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLDRPWSLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + ++ + Q Y LS++QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLASEFGVRDGQ----YYLSEVQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ +L IL++S+R++E+I +EL IK ++G RR+EI + + + ED
Sbjct: 476 EYKELLVEISELLHILNSSERLMEVIREELEKIKAEFGDE----RRTEITAASGDINLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L E+IT ILP+ N +F + ++
Sbjct: 592 FSSCGRLYQLKVYQLPQASRGARGTPIVNILPLVKGENERITAILPVPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G VKK L FSN R SG+IA+ L D LIG +T+G +IMLFS G+ VRF
Sbjct: 650 FMATASGTVKKVSLDAFSNVRSSGLIALKLREGDELIGVDITNGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLEKKQ------------------------------KVIALL 745
E +VR MGR A GV G++L + KV++L+
Sbjct: 710 AETAVRGMGRVATGVRGIKLATTEISVDDAEEVDIETVENEEAEEASSVNLTTDKVVSLV 769
Query: 746 VSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEI 805
+ + Q + +LT T+NGYGKRT + EY +R TKG++SIK N+RNGKVVAA V +I
Sbjct: 770 IPHTQGE-ILTVTQNGYGKRTALGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEENDQI 828
Query: 806 MLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852
MLIT G L+RTRV+E+ +GR+TQGV +I + ++R+C+I
Sbjct: 829 MLITDAGTLVRTRVNEVSLVGRNTQGVRIIRTAEDEHVVSLERICEI 875
>gi|153829746|ref|ZP_01982413.1| DNA gyrase, A subunit, partial [Vibrio cholerae 623-39]
gi|148874780|gb|EDL72915.1| DNA gyrase, A subunit [Vibrio cholerae 623-39]
Length = 848
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/862 (53%), Positives = 612/862 (70%), Gaps = 42/862 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ AKE+ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN
Sbjct: 1 MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DLDKET+D++ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + N +I++L+ IP PDFPTA +I G + D Y TG+G+V
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+R+K IE ++ + II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 YMRSKAEIET-DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE KR+ + E+VLN LY TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+E
Sbjct: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL +AL NID I++IR +TP EAK +I W+L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + I + Y L++ QAQ IL + L +LT +E +KI++
Sbjct: 420 AAMLERAGTDAARPEWLEPQYGI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ +++++ L IL++++R++E+I +EL I+ + + RR+EI + E+
Sbjct: 476 EYKQLLEEIAALMHILASTERLMEVIREELEAIRAGF----SDARRTEITAATHDIDMEE 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K Q +S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL
Sbjct: 532 LIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILL 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS G+ Y +KV+Q+P SR +RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM
Sbjct: 592 FSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+N R +G+IA+NL +ED LIG +TDG +IMLFS GK VRF E
Sbjct: 648 ATGDGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKE 707
Query: 718 N-------------------------SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQ 752
+ VR MGR+A GV GM+L +V++L+V +
Sbjct: 708 SEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG- 766
Query: 753 SVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGG 812
VLT TENGYGKRT + EY RGT+G++SIK ++RNG VV A V E M+IT G
Sbjct: 767 DVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAG 826
Query: 813 ILIRTRVSEIRKMGRSTQGVIL 834
L+RTRV+E+ ++GR+TQGV L
Sbjct: 827 TLVRTRVAEVSQVGRNTQGVTL 848
>gi|152979411|ref|YP_001345040.1| DNA gyrase subunit A [Actinobacillus succinogenes 130Z]
gi|150841134|gb|ABR75105.1| DNA gyrase, A subunit [Actinobacillus succinogenes 130Z]
Length = 890
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/882 (51%), Positives = 632/882 (71%), Gaps = 45/882 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ ++++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + N N
Sbjct: 1 MSELSQDITPVSIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQSGNTHN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ +VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KAYVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+DF NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N + SI++L++ IP PDFPTA +I G + + Y TG+G+V
Sbjct: 181 NIPPHNLGEVMDGCLAYIDNEDISIDELMQFIPGPDFPTAALINGRRGIEEAYKTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I N + R I++ E+PYQVNK L+EKI +L++EKK+E IS + D S+K G
Sbjct: 241 YVRAKAEI-VTNDKGREQIVVTEIPYQVNKAKLVEKIGELIREKKIEGISGILDLSNKEG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+ I++KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPKL NLK+I+ F+ HR+E
Sbjct: 300 IRLEIDIKRDAVGEVVLNHLYALTQMQVTFGINMVALDHGQPKLFNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE AHILEGL IAL NID I +IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTVYELRKARERAHILEGLAIALANIDPVINLIRASKTADEAREGLLARAWELGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDVSRPDDLPAECGVREGQ----YYLSETQARAILELRLHRLTGLEHEKIVS 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ ++ + IL++ +R+ E+I +EL ++K + + RR+EI + + + ED
Sbjct: 476 EYQEILVQIGEYLHILTSIERLREVIREELELVKTNF----NDARRTEITTASSDINLED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K++D+I +L +ANTHD ILC
Sbjct: 532 LIAQEDVVVTLSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYWLKV+Q+P+ SR +RG+PI+N+ L+ E+IT ILP+++ + ++ +V M
Sbjct: 592 FSSRGRLYWLKVYQLPEASRGARGRPIVNILPLEENERITAILPVAS----YDEDKFVLM 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ GIVKKT L+ FS PR +GIIAVNL +ED LIG +TDGS +IMLFS G+ VRF E
Sbjct: 648 ATAGGIVKKTALTEFSRPRSNGIIAVNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAE 707
Query: 718 NSVRAMGRSARGVIGMRL--------------------EKKQ--------KVIALLVSNN 749
++VRAMGR+A GV G++L + Q KV++L+V N
Sbjct: 708 SAVRAMGRTATGVRGIKLALTNDLSDEESAVEIEEVSEDNSQESLDLNIDKVVSLVVPKN 767
Query: 750 QKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLIT 809
+ +LTAT+NGYGKRT ++EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT
Sbjct: 768 DGE-ILTATQNGYGKRTKLEEYPTKSRNTKGVISIKVSERNGKVVAATQVEEADQIMLIT 826
Query: 810 TGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
G L+RTRV+E+ +GR+TQGV LI ++ ++R+ +
Sbjct: 827 DAGTLVRTRVTEVSVVGRNTQGVRLIRTAEDEQVVSLERVAE 868
>gi|304310666|ref|YP_003810264.1| DNA gyrase subunit A [gamma proteobacterium HdN1]
gi|301796399|emb|CBL44607.1| DNA gyrase (topoisomerase II) A subunit [gamma proteobacterium
HdN1]
Length = 900
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/853 (52%), Positives = 626/853 (73%), Gaps = 10/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AKE++ I +E+E+ KSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E++N WN
Sbjct: 1 MSELAKEILPINIEDELKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNHWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQYFSLRYMLVDGQGNFGSIDGDNPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ELL DLDKET+DF+ NYDG E+ PSVLPT++PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMAKIAHELLADLDKETVDFVPNYDGSEQMPSVLPTKVPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVID + + E +I L+K I PDFPT GII G + + + Y TG+GR+
Sbjct: 181 NIPPHNLGEVIDACFAFMDDSEITIEGLMKHIQGPDFPTYGIINGRAGIIEAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R +II+ E+PYQ+NK L+E+I++LVKEK +E I+ LRDESDK+
Sbjct: 241 RIRARATVERDAKTGRDSIIVTEIPYQLNKARLIERIAELVKEKLIEGITELRDESDKN- 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+RIVIE++R E ++VLN LY QTQ+++ FG+NM+ALV+GQP+LLNL+ ++ F+ HR+E
Sbjct: 300 IRIVIEVRRGENADVVLNNLYSQTQMESVFGINMVALVDGQPRLLNLRGVIEAFVRHRQE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT++ELRKARE AHILEGL +AL NID I++I+S+++ EA+ +++ W +V
Sbjct: 360 VVTRRTVYELRKARERAHILEGLAVALANIDPVIELIKSSASRAEAEERLLAQGWQPGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + + N +Y LSD+QA+EIL+M L RLT +E +K+I +Y+
Sbjct: 420 IAMLERAGEAHACRPEGLPAHYGLRNGLYYLSDVQAREILEMRLHRLTGLETEKLIQEYQ 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ + +L IL++ +R++++I DEL I+ + + R++EI+ + ++ + EDLI
Sbjct: 480 EKLEIIRELLAILASRERLMQVIRDELTAIREGFA----DARKTEIVASQLDINDEDLIP 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+ +V+TLSN GY K+QP+ Y+AQ RGGRGK A K+ED I L + +THD ILCF++
Sbjct: 536 EETVVVTLSNDGYAKTQPLDHYQAQHRGGRGKAAAQVKEEDCIEHLLVVSTHDTILCFTS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++WLKV+QIPQ R ++G+PI+N+ SL EKIT ILPL R + + +VFM+TS
Sbjct: 596 AGKVFWLKVYQIPQAGRQAKGRPIVNLLSLGENEKITAILPL----RGYDGDRFVFMATS 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKK L FS PR G+IA+ L + L+G A+T+G DIML S GKAVRF+EN V
Sbjct: 652 NGTVKKVALQEFSRPRSQGLIALELEENNRLVGVAITEGHQDIMLLSSEGKAVRFDENEV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+ARGV GM L + VIAL+V + Q +LTA ENG+GKRTL+ E+ RG KG
Sbjct: 712 RAMGRTARGVRGMNLPEDAAVIALIVPDPDAQ-ILTACENGFGKRTLVSEFPTKGRGGKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+T++RNGK++ A VN +E+MLI+ G ++R R E+ MGR TQGV LI +
Sbjct: 771 MIAIRTSERNGKLMGAVQVNDGNEVMLISDQGTMVRIRADEVSLMGRDTQGVTLIRLNEG 830
Query: 841 SKLCGVQRLCKIT 853
+L G++++ +++
Sbjct: 831 ERLVGIEQVEEVS 843
>gi|384081921|ref|ZP_09993096.1| DNA gyrase subunit A [gamma proteobacterium HIMB30]
Length = 874
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/852 (51%), Positives = 619/852 (72%), Gaps = 11/852 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E++ I +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFA E++N WN
Sbjct: 1 MSDSAREILPINIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAQSELSNNWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R L+DGQGNFGS+DGD AAAM
Sbjct: 61 AAYKKSARVVGDVIGKYHPHGDSAVYDTIVRLAQPFSMRYPLIDGQGNFGSVDGDRAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++ELL DLDKET+D++ NYDG EK P VLPT+IPNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEIRMERIAHELLADLDKETVDYVPNYDGTEKIPDVLPTKIPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG L L + S+ L++ I APDFPT +I GL V + Y TG+GRV
Sbjct: 181 NIPPHNLTEVIDGCLAYLDDSTLSVTQLMEFIQAPDFPTGALINGLEGVREAYATGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
I+R++ HIE E++ +I+ E+PYQVNK ++EKI++LVK+KK+E I+ LRDESDK G
Sbjct: 241 IMRSRFHIEG---EDKKSIVFTEIPYQVNKARVIEKIAELVKDKKIEGITELRDESDKDG 297
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV++L+R E PE+++N L+ QTQLQ++FG+NM+ALV+GQPK LNLKE+L FI HR+E
Sbjct: 298 MRIVVDLRRGETPEVIVNNLFSQTQLQSSFGINMVALVDGQPKTLNLKEMLSCFIRHRRE 357
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKARE HILEG +AL NID I++I+++ Q AK ++I ++W V
Sbjct: 358 VVTRRTIYELRKARERGHILEGQAVALANIDPVIELIKNSENAQVAKERLIATSWAPGSV 417
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++++ + + L + Y LS QAQ IL + L RLT +E +K++++Y
Sbjct: 418 TEMLERAGTGGIRPDDLPDGFGLIDG-KYHLSPQQAQAILDLRLHRLTGLEIEKLLDEYG 476
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++++ + + IL++ +++ E+I EL ++N++G RRSEII + ++ STEDLI
Sbjct: 477 SILEDIAEREAILADPEKLTEVIRGELEAVRNQFGDD----RRSEIIESHLSLSTEDLIP 532
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+T S GY K+QP++ Y++Q+RGGRGK A KDED ++ L +AN+HD +L F++
Sbjct: 533 REDMVVTFSKTGYAKTQPLASYQSQRRGGRGKSATNLKDEDVVDLLLVANSHDTLLLFTD 592
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMF-SLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
GRL+WLKV++IPQ SRN+RGKPI+NM +L+ ++T +LPL + D + YVFM+T
Sbjct: 593 TGRLHWLKVYEIPQASRNARGKPIVNMIDALEGGGRVTAVLPLGED--DQGEGRYVFMAT 650
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ G VKK L F+ PR SGI A+ + +D LIGA++TDG+ DI+L + +GK RF+E
Sbjct: 651 ARGTVKKVPLERFARPRASGIRAIEFNEDDTLIGASITDGTRDIVLVNSNGKVTRFDETE 710
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VR MGR ARGV G+RL++ +++ ++ + + S+L A ENGYGKRTL+ E+ RG
Sbjct: 711 VRPMGREARGVRGIRLKQSGEIVVAMIVADDEASLLLACENGYGKRTLVSEFPCKGRGAM 770
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I I+T++RNG+VV A V +++LIT GG ++RT +I +GR+TQGV LI +
Sbjct: 771 GVIGIQTSERNGQVVGAAQVIDDDDLLLITNGGTMVRTPCQDISILGRNTQGVTLIRLTE 830
Query: 840 KSKLCGVQRLCK 851
+L V + +
Sbjct: 831 GEQLVRVDAVAE 842
>gi|240949001|ref|ZP_04753355.1| DNA gyrase subunit A [Actinobacillus minor NM305]
gi|240296588|gb|EER47206.1| DNA gyrase subunit A [Actinobacillus minor NM305]
Length = 885
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/881 (51%), Positives = 622/881 (70%), Gaps = 40/881 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + + + SI +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIEDEQISIEELMRHIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E ++ R I++ ELPYQVNK L+EKI++LVK+KK+E IS + D SDK G
Sbjct: 241 YVRAKASVETTDK-GREQIVVTELPYQVNKAKLIEKIAELVKDKKIEGISKIDDYSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL NGQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVAEVVLNHLYSLTQMQVTFGINMVALDNGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRASKTADEAREGLLARAWELGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ Y LS+ QA+ IL++ L RLT +E +KI+++Y+
Sbjct: 420 APMLEAAGVDASRPEDLPEELGVRDGK-YFLSEAQARAILELRLHRLTGLEHEKIVDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL +K+++G RR+EI + + + EDLIA
Sbjct: 479 ALLVEIGELLHILTSPERLMEVIREELERVKSEFGDE----RRTEITAASGDINIEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYVFMS 658
GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++FM+
Sbjct: 595 RGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPVPNG--EFSADKFIFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKK L FSN R SG+IA+ L D LIG +T+G +IMLFS G+ VRF E
Sbjct: 653 TASGTVKKVSLDAFSNVRSSGLIALKLREGDELIGVDITNGESEIMLFSAQGRVVRFAET 712
Query: 719 SVRAMGRSARGVIGMRLEKKQ-----------------------------KVIALLVSNN 749
VR MGR A GV G++L + KV++L++ +
Sbjct: 713 QVRGMGRVATGVRGIKLATTEISDEVEDVEIETVENEDTEETSSVNLTTDKVVSLVIPHT 772
Query: 750 QKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLIT 809
Q + +LT T+NGYGKRT + EY +R TKG++SIK N+RNGKVVAA V +IMLIT
Sbjct: 773 QGE-ILTVTQNGYGKRTALSEYPVKSRATKGVVSIKVNERNGKVVAAVQVEENDQIMLIT 831
Query: 810 TGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
G L+RTRV+E+ +GR+TQGV +I + + ++R+C
Sbjct: 832 DAGTLVRTRVNEVSLVGRNTQGVRIIRTADDEHVVSLERIC 872
>gi|377555524|ref|ZP_09785252.1| DNA gyrase subunit A [endosymbiont of Bathymodiolus sp.]
Length = 858
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/841 (51%), Positives = 612/841 (72%), Gaps = 13/841 (1%)
Query: 11 ILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVV 70
+ +E+EM SYL+YAMSVIVGRALPDVRDGLKPVHRRVL+AM + N +N+ + K AR+V
Sbjct: 18 VTIEDEMRDSYLEYAMSVIVGRALPDVRDGLKPVHRRVLYAMDVLGNDYNKSYKKSARIV 77
Query: 71 GETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKI 130
G+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGD AAAMRYTE R+ K+
Sbjct: 78 GDVIGKYHPHGDTAVYDTIVRMAQPFSMRSILIDGQGNFGSVDGDRAAAMRYTEIRMTKL 137
Query: 131 SNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEV 190
S+ELL DLDK+T+DFI NYDG E EPSVLPTR+PNLL+NGSSGIAVGMATNIPPHNL EV
Sbjct: 138 SHELLRDLDKQTVDFIDNYDGSESEPSVLPTRVPNLLVNGSSGIAVGMATNIPPHNLGEV 197
Query: 191 IDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEE 250
+D L V+ +++DL+ ++P PDFPT GII G S + Y TGKG++ +R+ +H+E
Sbjct: 198 VDACLAVIDKDTITLDDLLALMPGPDFPTEGIINGASGIRQAYETGKGKIYLRSVSHVE- 256
Query: 251 FNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRN 310
E++ +I++ ELPYQVNK L+ KI++LVK+KK++ I+ LRDESDK GMR+VIEL+R
Sbjct: 257 --GEDKQSIVVTELPYQVNKAKLITKIAELVKDKKVDGITGLRDESDKDGMRMVIELRRG 314
Query: 311 EIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFEL 370
E+PE++LN LYK T++Q FG+NM+A+ G PKL+ L+ IL FI HR++V+ RR+IFEL
Sbjct: 315 EVPEVMLNNLYKLTEMQTVFGINMVAIDKGMPKLMTLRGILDAFIAHRRDVVTRRSIFEL 374
Query: 371 RKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKN 430
KAR AHILEGL++AL+NID I+++++ +P +AK ++I TW + +IG +
Sbjct: 375 NKARNRAHILEGLSVALSNIDEIIELVKAAPSPTKAKEQLIAKTWQGSAIKDLIGERDMS 434
Query: 431 YNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLT 490
+ LQ + Y+LS QAQ IL + L RLT +E+ KI +++ +++ + L
Sbjct: 435 LFKPEDLPAELGLQQSGDYQLSPKQAQAILDLKLHRLTGLEKDKIFDEFNELLEGIKYLL 494
Query: 491 DILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSN 550
DIL N ++++++I DEL I++ + N R +EII N I+ + EDLIA ++ V+TLS+
Sbjct: 495 DILQNPEKLMQVIRDELIEIRDNFA----NKRLTEIIENKIDLTLEDLIAQEERVVTLSH 550
Query: 551 LGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVW 610
GY+K+Q +S+Y+AQ+RGG+GK A KDED+++QLF+AN+HD +LCFS+ G+++WLKV+
Sbjct: 551 GGYVKAQSLSDYQAQRRGGKGKAATKMKDEDFVDQLFVANSHDTVLCFSSTGKVHWLKVY 610
Query: 611 QIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLS 670
++P SR +RGKPIIN+ L+ E I ILP++ +F ++ +VFM TS G KKT L+
Sbjct: 611 ELPMASRTARGKPIINLLPLEKDEVINAILPVA----EFTQDQFVFMVTSSGTCKKTSLT 666
Query: 671 NFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGV 730
NFS PRK GIIA+ L + D L+G +T G DIMLFS +GK++RF E+ VRA+GR+A GV
Sbjct: 667 NFSRPRKGGIIAIELRDGDKLVGVDITSGENDIMLFSANGKSIRFKESDVRAVGRTAIGV 726
Query: 731 IGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRN 790
GM+L+ + V A++ ++ +LTATE GYGKRT + EY RG G+ISIKT+ RN
Sbjct: 727 RGMKLKDDEIVSAIIADDS--SPILTATEKGYGKRTNLDEYRAQARGGSGVISIKTSDRN 784
Query: 791 GKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
GKVV A V E+MLI+ L+R R +++ +GR+TQGV LI + KL + ++
Sbjct: 785 GKVVGAIQVTDEDEMMLISNKATLVRARANDVSIIGRNTQGVTLIKIAKGEKLVSIAKIA 844
Query: 851 K 851
+
Sbjct: 845 E 845
>gi|257465346|ref|ZP_05629717.1| DNA gyrase subunit A [Actinobacillus minor 202]
gi|257451006|gb|EEV25049.1| DNA gyrase subunit A [Actinobacillus minor 202]
Length = 885
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/881 (51%), Positives = 621/881 (70%), Gaps = 40/881 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
RP VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + + + SI +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIEDEQISIEELMRHIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E ++ R I++ ELPYQVNK L+EKI++LVK+KK+E IS + D SDK G
Sbjct: 241 YVRAKASVETTDK-GREQIVVTELPYQVNKAKLIEKIAELVKDKKIEGISKIDDYSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL NGQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVAEVVLNHLYSLTQMQVTFGINMVALDNGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRASKTADEAREGLLARAWELGNV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + + +++ Y LS+ QA+ IL++ L RLT +E +KI+++Y+
Sbjct: 420 APMLEAAGVDASRPEDLPAELGVRDGK-YFLSEAQARAILELRLHRLTGLEHEKIVDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL++ +R++E+I +EL +K ++G RR+EI + + + EDLIA
Sbjct: 479 ALLVEIGELLHILTSPERLMEVIREELERVKAEFGDE----RRTEITAASGDINIEDLIA 534
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L +ANTHD ILCFS+
Sbjct: 535 QEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSS 594
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYVFMS 658
GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++FM+
Sbjct: 595 RGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPVPNG--EFSADKFIFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VKK L FSN R SG+IA+ L D LIG +T+G +IMLFS G+ VRF E
Sbjct: 653 TASGTVKKVSLDAFSNVRSSGLIALKLREGDELIGVDITNGESEIMLFSAQGRVVRFAET 712
Query: 719 SVRAMGRSARGVIGMRLEKKQ-----------------------------KVIALLVSNN 749
VR MGR A GV G++L + KV++L++ +
Sbjct: 713 QVRGMGRVATGVRGIKLATTEISDEVEDVEIETVENEDAEETSSVNLTTDKVVSLVIPHT 772
Query: 750 QKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLIT 809
Q + +LT T+NGYGKRT + EY +R TKG++SIK N+RNGKVVAA V +IMLIT
Sbjct: 773 QGE-ILTVTQNGYGKRTALSEYPVKSRATKGVVSIKVNERNGKVVAAVQVEENDQIMLIT 831
Query: 810 TGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
G L+RTRV+E+ +GR+TQGV +I + + ++R+C
Sbjct: 832 DAGTLVRTRVNEVSLVGRNTQGVRIIRTADDEHVVSLERIC 872
>gi|384084569|ref|ZP_09995744.1| DNA gyrase subunit A [Acidithiobacillus thiooxidans ATCC 19377]
Length = 846
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/847 (52%), Positives = 612/847 (72%), Gaps = 21/847 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M +FAKE I + LE+EM +SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHEMNN WN
Sbjct: 1 MIEFAKETIPVSLEKEMRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHEMNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDTAVYDTMVRMAQDFSMRYPLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++E+L DL+KET+DF NYD KE EP V+P RIPNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMSRIAHEMLADLEKETVDFGPNYDEKEWEPLVMPARIPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+I+ L ++ +P+ S L ++PAPDFPTAG I G + + Y +G+GRV
Sbjct: 181 NIPPHNLTEIINACLALVDDPQTSDEALFDLVPAPDFPTAGYILGRAGSIEAYRSGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA++ E + NR +II+ ELPYQVNK L+E+I+++VKEK+LE IS+LRDESDKSG
Sbjct: 241 VMRARSEFETDKKTNRQSIIVTELPYQVNKARLIERIAEMVKEKRLEGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IELKR+ ++VLN L++ T +Q+ F +NM+AL++G P+ L L+E+L FI HR+E
Sbjct: 301 MRIAIELKRDANADVVLNNLFQHTAMQSVFNINMVALLDGAPRTLGLRELLDAFIQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFEL+KAR+ AHILEGL +AL N+D I +IR+ + P EAK K++E W V
Sbjct: 361 VVTRRTIFELKKARDRAHILEGLAVALVNLDPLISLIRAAANPAEAKAKMLERVWEPGMV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ + +++ S D Y LS+ QAQ IL + L RLT +EQ KI ++Y
Sbjct: 421 ASL----------LTERGEPSDGMQTDGYHLSETQAQAILDLRLHRLTGLEQDKIRDEYL 470
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ + +IL + R++E+I +EL I ++YG ++RRSEI+ + + S EDLIA
Sbjct: 471 GLLDRIKEFLEILGSHVRLMEVIREELVAILDQYG----DVRRSEIVADTGDISNEDLIA 526
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
++MV+T ++ GYIK+QP++ + AQ+RGG+GK A TK+ED++ ++F A+TH Y L FSN
Sbjct: 527 EEEMVVTFTHAGYIKAQPVTVFNAQRRGGKGKMATTTKEEDFVERMFCASTHAYCLFFSN 586
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++W K++Q+PQ R ++GKPI+N+ SL E IT +L + RDF + +V M T+
Sbjct: 587 LGKVFWQKIYQLPQAGRGAKGKPIVNLLSLAPTEHITAVLAV----RDFTEGQFVCMVTA 642
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT + ++S PR GI A+NL + D L+ L+DG ++MLF+ G AVRF E +V
Sbjct: 643 HGVVKKTPVMDYSRPRSQGINAINLDDGDRLVSVCLSDGQREVMLFTRHGMAVRFPEENV 702
Query: 721 RAMGRSARGVIGMRLEKKQKVI-ALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
RA GRS RGV G+ L + +VI A LV N Q VLTAT NGYGK T ++EY + NRG K
Sbjct: 703 RATGRSTRGVRGISLAENDRVISAELVDAN--QIVLTATANGYGKLTTVEEYRRTNRGGK 760
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+I+TN+RNG VV A V E+ML++ G LIR V IR+ GR+ QGV LI +
Sbjct: 761 GVIAIQTNERNGNVVGALAVAERDELMLVSDHGTLIRIAVDSIRRTGRNAQGVRLINLGE 820
Query: 840 KSKLCGV 846
+L G+
Sbjct: 821 GEQLAGL 827
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 655 VFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDFLIGAALTDGSYDIMLFSDSGKA 712
V T G +K ++ F+ R+ G +A EDF+ + FS+ GK
Sbjct: 531 VVTFTHAGYIKAQPVTVFNAQRRGGKGKMATTTKEEDFVERMFCASTHAYCLFFSNLGKV 590
Query: 713 VRFNENSVRAMGRSARG---VIGMRLEKKQKVIALLVSNN--QKQSVLTATENGYGKRTL 767
+ GR A+G V + L + + A+L + + Q V T +G K+T
Sbjct: 591 FWQKIYQLPQAGRGAKGKPIVNLLSLAPTEHITAVLAVRDFTEGQFVCMVTAHGVVKKTP 650
Query: 768 IKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGR 827
+ +Y++ ++GI +I + + ++V+ L + E+ML T G+ +R +R GR
Sbjct: 651 VMDYSRPR--SQGINAINLDDGD-RLVSVCLSDGQREVMLFTRHGMAVRFPEENVRATGR 707
Query: 828 STQGVILITVENKSKLCGVQ 847
ST+GV I++ ++ +
Sbjct: 708 STRGVRGISLAENDRVISAE 727
>gi|374619384|ref|ZP_09691918.1| DNA gyrase, A subunit [gamma proteobacterium HIMB55]
gi|374302611|gb|EHQ56795.1| DNA gyrase, A subunit [gamma proteobacterium HIMB55]
Length = 894
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/848 (51%), Positives = 601/848 (70%), Gaps = 10/848 (1%)
Query: 4 FAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPF 63
A+EV I +E+E+ +SY+DYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WN+ +
Sbjct: 8 LAQEVHPINIEDELKQSYMDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWNKAY 67
Query: 64 VKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYT 123
K ARVVG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGSIDGDSAAAMRYT
Sbjct: 68 KKSARVVGDVIGKYHPHGDSAVYDTIVRMAQTFSLRYPLVDGQGNFGSIDGDSAAAMRYT 127
Query: 124 ECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIP 183
E R+ K+++ LL DL+KET+DF NYDG E P+VLPTR PNLLINGS+GIAVGMATNIP
Sbjct: 128 EIRMTKLAHSLLADLEKETVDFAENYDGTEHIPTVLPTRAPNLLINGSAGIAVGMATNIP 187
Query: 184 PHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIR 243
PHN+ EV+ G + +L NPE ++DLI+ IP PDFPT II G + + Y TG+GR+ +R
Sbjct: 188 PHNMREVVAGCMALLENPELEVDDLIRYIPGPDFPTGAIITGRAGIIQAYRTGRGRIYVR 247
Query: 244 AKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRI 303
AK + + + III E+PYQ+NK LLE+I++LVKEKK+E I+ LRDESDK G+R+
Sbjct: 248 AKAEVVTDEAKGKDTIIIHEIPYQLNKARLLERIAELVKEKKIEGITELRDESDKDGLRV 307
Query: 304 VIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIK 363
VIEL+R E+ ++VLN LY QTQLQ+ G+NM+ALV+GQPK+LNLKEI+ F+ HR+EV+
Sbjct: 308 VIELRRGEVGDVVLNNLYAQTQLQSVVGINMVALVDGQPKVLNLKEIIEAFLRHRREVVT 367
Query: 364 RRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKI 423
RRT+F LRKARE H+LEGL +AL NID I++I+++ T +A+ +++ + W DVS +
Sbjct: 368 RRTLFLLRKARERGHVLEGLAVALANIDEIIELIKTSPTAADARERLVAAAWAPGDVSAM 427
Query: 424 IGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVI 483
+ + + L + Y LS QAQ IL + L RLT +E +K++ +Y + +
Sbjct: 428 LERAGEAACRPEDLEGDFGLIDG-KYHLSPAQAQAILDLRLNRLTGLEHEKLLQEYADKV 486
Query: 484 KKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQD 543
++ DL DIL + R+ +I +EL + +G R +EI +A + + EDLI +D
Sbjct: 487 AEIADLLDILGDPDRLRAVIREELEELVADFGDE----RLTEITDSAHDLTVEDLITEED 542
Query: 544 MVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGR 603
V+T+S+ GY K+Q +++Y+AQ+RGG G+ A KDED++ L IA+TH +LCFSN G+
Sbjct: 543 RVVTISHQGYAKTQSLTDYQAQRRGGTGRSATAVKDEDFVEHLLIASTHATVLCFSNMGK 602
Query: 604 LYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGI 663
+YWLKV+ IP SRN+RG+P++N+ L E+IT ILP+ + ++ ++FM+T+ G
Sbjct: 603 VYWLKVFHIPLASRNARGRPMVNLLPLDENERITSILPIEG----YDEDQFIFMATANGT 658
Query: 664 VKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAM 723
VKKT + F+ R G+ A+ L +D L+G A+TDG+ DIMLFS GKA RFNE+ VRAM
Sbjct: 659 VKKTAATQFARQRSVGLRAIELDEDDVLVGTAITDGNSDIMLFSSEGKATRFNESQVRAM 718
Query: 724 GRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIIS 783
GR+ARGV G+ L K+I+L+V + +LT TENGYGKRT E+ RG KG+I+
Sbjct: 719 GRTARGVRGINLADGHKLISLIVP-KEGGRILTVTENGYGKRTENAEFPAKGRGGKGVIA 777
Query: 784 IKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKL 843
+ T+ RNG +V A V E+MLI+ G +RTRV E+ +GR+TQGV +I + L
Sbjct: 778 MSTSARNGSLVGAVQVWDTDEMMLISNQGTAVRTRVEEVSLLGRNTQGVRVIRTRDGEAL 837
Query: 844 CGVQRLCK 851
V R+ +
Sbjct: 838 VSVSRIVE 845
>gi|374314188|ref|YP_005060617.1| DNA gyrase subunit A [Serratia symbiotica str. 'Cinara cedri']
gi|363988414|gb|AEW44605.1| DNA gyrase, A subunit [Serratia symbiotica str. 'Cinara cedri']
Length = 846
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/853 (53%), Positives = 610/853 (71%), Gaps = 16/853 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+ + + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM + N WN
Sbjct: 1 MSDLARNITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSILGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD ++YD +VRMAQSFSLR L+DGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQSFSLRYMLIDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+++I++E+L+DL+KET++F+ NYDG E+ PS++P RIPNLLING+SGIAVGMAT
Sbjct: 121 RYTEVRMSRIAHEILVDLEKETVNFMPNYDGSEQIPSIMPARIPNLLINGASGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+E+I+G L ++N SI L++ IP PDFPTA II G + + Y TG+G++
Sbjct: 181 NIPPHNLSEIINGCLAYINNEHISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RA+ +E + R I++ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YLRARAKVETDAKTRRETIVVGEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI+IE+KR+ + ++VLN LY TQLQ TFG+NM+AL QPKLLNLKEIL F+ HR+E
Sbjct: 301 MRIIIEVKRDAVGDVVLNNLYTLTQLQVTFGINMVALHQDQPKLLNLKEILLSFVQHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILE L IAL NI++ I +IR T EAK ++ W L V
Sbjct: 361 VVTRRTIFELRKARERAHILEALAIALVNINSIIDLIRLAPTLVEAKAALVGQGWELGAV 420
Query: 421 SKI---IGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
S I IG + + I + Y L+ QA IL+M LQ+LT +E +K++N
Sbjct: 421 STILERIGSDAARPELLEAKFGIC----DGRYHLTMQQASAILEMRLQKLTCLEHEKLLN 476
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y+ ++ + +L IL N R++ +I +EL IKN+Y R +EI N + + ED
Sbjct: 477 EYKELLHVITELISILENPDRLMNVICEELIAIKNQYSDK----RLTEITDNMSDINIED 532
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI + +V+TLS GY+K Q +S Y Q+RGG+G+ A K ED+I++L + NTHD ILC
Sbjct: 533 LINQEKVVVTLSYQGYVKYQSLSSYEVQRRGGKGRSAARIKKEDFIDRLLVVNTHDTILC 592
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FS+ GRLYW+KV+Q+P+ S +RG+PI+N+ L+ E+IT ILP+ N + K YVFM
Sbjct: 593 FSSLGRLYWMKVYQLPEVSCAARGRPIVNLLPLEMNERITAILPVDN----YEKGRYVFM 648
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T+ G VKKT L++FS PR +GIIAV+L+ D LIG LTDG+ ++MLFS SGK VRF E
Sbjct: 649 ATARGTVKKTALTDFSRPRSAGIIAVHLNAGDKLIGVDLTDGNNEVMLFSTSGKVVRFPE 708
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
N VR+MGR+A GV G+ L VI+L+V +LT T+NG+GKRT I Y +R
Sbjct: 709 NQVRSMGRTAIGVRGINLGIGDSVISLIVP-RASGDILTVTQNGFGKRTAITAYPTKSRA 767
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G+ISIK ++RNG+VV A V +IM+IT G L+RTRVSE+ +GR+TQGV LI
Sbjct: 768 TQGVISIKVSERNGQVVGAVQVENIDQIMMITDAGTLVRTRVSEVSLVGRNTQGVRLIRT 827
Query: 838 ENKSKLCGVQRLC 850
+ + G+QR+
Sbjct: 828 VEEENVVGLQRVA 840
>gi|254281687|ref|ZP_04956655.1| DNA gyrase, A subunit [gamma proteobacterium NOR51-B]
gi|219677890|gb|EED34239.1| DNA gyrase, A subunit [gamma proteobacterium NOR51-B]
Length = 865
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/850 (50%), Positives = 608/850 (71%), Gaps = 11/850 (1%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
Q A+EV+ + +E+E+ +SY+DYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WN+
Sbjct: 6 TQIAREVLPVNIEDELKQSYMDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWNK 65
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGS+DGDSAAAMR
Sbjct: 66 PYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYTLVDGQGNFGSVDGDSAAAMR 125
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R++K+++ LL DLDKET+DF+ NYDG E+ PSVLPTR+PNLL+NGSSGIAVGMATN
Sbjct: 126 YTEIRMSKVAHALLADLDKETVDFVDNYDGTERIPSVLPTRVPNLLVNGSSGIAVGMATN 185
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHN+ EVI G L L N + +I+ L+ IP PDFPT II G + + Y TG+GR+
Sbjct: 186 IPPHNMREVIAGCLAYLDNSDITIDQLMDYIPGPDFPTGAIINGRAGIVQAYRTGRGRIY 245
Query: 242 IRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGM 301
+RA+ + + + + II+ E+PYQ+NK L+E+I++LVKEKK+E I+ LRDESDK G+
Sbjct: 246 VRARAEVVS-DSKGKDTIIVHEIPYQLNKARLIERIAELVKEKKIEGITELRDESDKDGL 304
Query: 302 RIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEV 361
R+VIEL+R E+ ++VLN LY QT LQ+ GMNM+ALV+GQPK+LNLKE++ F+ HR+EV
Sbjct: 305 RVVIELRRGEVGDVVLNNLYAQTALQSVVGMNMVALVDGQPKVLNLKEMIAAFVRHRREV 364
Query: 362 IKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVS 421
+ RRT++ L+KARE H+LEGL +AL NID I++I+S+ T +A+ ++I++ W DV+
Sbjct: 365 VTRRTVYLLKKARERGHVLEGLAVALANIDEVIEMIKSSPTAADARERLIDAAWAPGDVN 424
Query: 422 KIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYEN 481
++ ++ L Y LS QAQ IL + L RLT +E +K++ +Y +
Sbjct: 425 AMLERAGAAACRPDDLDVCYGLVEG-AYHLSPAQAQAILDLRLHRLTGLEHEKLLQEYAD 483
Query: 482 VIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIAS 541
+ ++ D DIL +S+R+ +I +EL ++G R +EI +A + + EDLI
Sbjct: 484 KLTEIADYLDILEDSERLKRVIREELEETVAEFGDE----RMTEITDSAHDLTVEDLITE 539
Query: 542 QDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNY 601
+D V+T+S+ GY K+QP+++Y+AQ+RGG G+ A KDED++ L IA+TH ILCFSN
Sbjct: 540 EDRVVTISHGGYAKTQPLTDYQAQRRGGTGRSATAVKDEDFVEHLLIASTHSTILCFSNL 599
Query: 602 GRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSL 661
G++YWL+V+ IP SRNSRG+P++N+ L + E++T ILP+ + +Y+FM+T+
Sbjct: 600 GKVYWLRVFNIPVASRNSRGRPMVNLLPLDDGERVTSILPVEG----YEAGSYIFMATAK 655
Query: 662 GIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVR 721
G VKKT ++ F+ R G+ A+ L D L+G A+TDGS D+MLFS GKAVRFNE +VR
Sbjct: 656 GTVKKTEMTQFARQRSVGLRAIELEEGDHLVGTAVTDGSCDVMLFSSEGKAVRFNEAAVR 715
Query: 722 AMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGI 781
MGR+A+GV G+RL +I+L++ Q + +LT +ENGYGKR+ ++ RGT G+
Sbjct: 716 PMGRTAKGVRGIRLGGDYSLISLIIPKQQGR-ILTVSENGYGKRSETADFPVRGRGTMGV 774
Query: 782 ISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKS 841
I++ T+ RNG +V A V EIMLI+ G +RTR+ EI GR+TQGV +I ++
Sbjct: 775 IAMSTSDRNGALVGAEQVWDGDEIMLISNQGTAVRTRIDEISLQGRNTQGVRVIRTRDEE 834
Query: 842 KLCGVQRLCK 851
L + R+ +
Sbjct: 835 SLVSISRIAE 844
>gi|422350551|ref|ZP_16431435.1| DNA gyrase, A subunit [Sutterella wadsworthensis 2_1_59BFAA]
gi|404657154|gb|EKB30057.1| DNA gyrase, A subunit [Sutterella wadsworthensis 2_1_59BFAA]
Length = 924
Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/850 (52%), Positives = 615/850 (72%), Gaps = 16/850 (1%)
Query: 5 AKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFV 64
A E++ I LE EM +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL AM+E+ N N P
Sbjct: 35 AHELLPISLESEMKRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLHAMNEIKNTHNNPTK 94
Query: 65 KCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTE 124
K ARVVGE +GKYHPHGD + Y +VRMAQ FSLR L+ GQGNFGSIDGDS AAMRYTE
Sbjct: 95 KAARVVGEVLGKYHPHGDSAAYMTIVRMAQPFSLRYPLIFGQGNFGSIDGDSPAAMRYTE 154
Query: 125 CRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPP 184
RL KI+ E+L D++++T+DF+ N+D E+EP VLPTR+P LLINGSSGIAVGMATNIPP
Sbjct: 155 VRLEKIAGEMLADINEDTVDFVPNFDNSEREPVVLPTRLPQLLINGSSGIAVGMATNIPP 214
Query: 185 HNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRA 244
HNL E ID L+ L NPECSI DLI+++PAPDFPT GII+G+S VH GY TG+GRV++RA
Sbjct: 215 HNLGETIDACLHQLRNPECSIEDLIRLMPAPDFPTGGIIFGISDVHQGYRTGRGRVVMRA 274
Query: 245 KTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIV 304
+TH+EEF R +R II+DE+PY VNK+ + EK+ +L++EKK+E I+ +RDES K +RI
Sbjct: 275 RTHLEEFGR-DRVRIIVDEIPYMVNKRVMYEKMHELMREKKIEGIAEMRDESSKE-IRIC 332
Query: 305 IELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKR 364
I+LK+ +PE+VLN L+K TQ+Q +FGMNM+ALV+GQP LLNL++++ +F+ HR+EV+ R
Sbjct: 333 IDLKQGAMPEVVLNNLFKMTQMQESFGMNMVALVDGQPTLLNLQQMIVHFLSHRREVVTR 392
Query: 365 RTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII 424
RT+F L K R H+LEG T+AL+N+D FI+IIR+ TP +A +++ W ++
Sbjct: 393 RTVFRLGKYRAQGHLLEGQTVALSNLDEFIRIIRNAKTPADAADELYGRGWPTAMAQELA 452
Query: 425 GFNKKNYNTI--SKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENV 482
+ ++ + ++ + +Q + +Y L+ +Q IL M L+RLT +EQ K+ Y +
Sbjct: 453 SRSVEDMHRYYPEDMDPVRGIQQDGLYYLTRVQIDNILAMSLRRLTGLEQDKVRADYAAM 512
Query: 483 IKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEI-ILNAINPSTEDLIAS 541
+ + D DIL+ +R+ II +EL I+ +YG RRS I ++ N + DLI
Sbjct: 513 MANIADCLDILARPERVNAIIGEELENIREEYGDE----RRSTIDLMGDPNFNKRDLIPR 568
Query: 542 QDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAM-MTKDEDWINQLFIANTHDYILCFSN 600
+DMV+TLS GYIKSQ +++Y AQ RGG+G+K MTKD D + +LFIAN+HD I+CFS
Sbjct: 569 RDMVVTLSRGGYIKSQDLADYDAQTRGGKGRKVQEMTKD-DEVAELFIANSHDVIMCFST 627
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y + V+++P+G N+RG+PI+N+ L+ E+I+ +LP+ F +Y+ M+T+
Sbjct: 628 AGRVYPIDVFELPEGKSNTRGRPIVNLLPLEEGEQISFMLPIQG----FDNEHYIVMATN 683
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G +KKT LS F N R GIIA L + L+G A++DG DIMLFSD+GK RF+E+ +
Sbjct: 684 RGTIKKTPLSAFRNARLKGIIATTLDEGETLVGVAVSDGGDDIMLFSDAGKCARFSESVL 743
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GVIGMRL++ Q VI+L+V+N++++ VL ATE+GYGKRTL+ EY + RG +G
Sbjct: 744 RPMGRAAHGVIGMRLDEGQSVISLIVTNDEQKYVLAATEHGYGKRTLVSEYQRKGRGIRG 803
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I T +RNG++V+A L + EIM++TTGG ++RT SE+ + R+ GV LI +
Sbjct: 804 VITISTKERNGRMVSAVLTDPDDEIMMLTTGGKVVRTSASEVSIVNRAAMGVRLINPGDD 863
Query: 841 SKLCGVQRLC 850
+ L V+R+
Sbjct: 864 T-LASVRRVA 872
>gi|1346229|sp|P48369.1|GYRA_AERSA RecName: Full=DNA gyrase subunit A
gi|1019146|gb|AAB41037.1| DNA gyrase [Aeromonas salmonicida]
Length = 922
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/927 (50%), Positives = 634/927 (68%), Gaps = 69/927 (7%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+ N WN
Sbjct: 1 MSDLAREITPINIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD +VR+AQ FS+R LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRLAQDFSMRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +IS+ELL DLDKET+D++ NYDG E P+V+PT++PNLL+NGSSGIAVGMA
Sbjct: 121 RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAW 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++G L ++ N +I++L+ I PDFPT II G + + Y TG+G V
Sbjct: 181 NIPPHNLTEIVNGCLALIENGNLTIDELMTYITGPDFPTGAIINGRAGIVQAYRTGRGSV 240
Query: 241 IIRAKTHIEEFNRENR-TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKS 299
+RAK +E ++ +R T II+ ELPYQVNK L+EKI++LVKEKK+E IS LRDESDK
Sbjct: 241 YVRAKAEVEVDDKTSRETIIIVHELPYQVNKARLIEKIAELVKEKKVEGISALRDESDKD 300
Query: 300 GMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRK 359
RIVIE+KR E EIVLN LYK TQLQ TFG+NM+AL N QPK++NLK+IL F+LHR+
Sbjct: 301 ACRIVIEIKRGESGEIVLNNLYKHTQLQTTFGINMVALDNNQPKVMNLKDILDAFLLHRR 360
Query: 360 EVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPD 419
EV+ RRT+FELRKAR+ AHILEGL +AL NID I++IR + TP +AK K++ W L +
Sbjct: 361 EVVTRRTVFELRKARDRAHILEGLAVALANIDPIIELIRHSDTPADAKAKLVARGWELGN 420
Query: 420 VSKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
V+ ++ G + + I + Q Y L++ QAQ IL + L +LT +E KI+
Sbjct: 421 VAAMLEKAGDDAARPEWLEPEFGIREGQ----YFLTEQQAQAILDLRLHKLTGLEHGKIL 476
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
+Y++++ + +L IL++ +R++E+I DEL ++ +YG R EI ++ + E
Sbjct: 477 EEYQSLLDLIAELLFILASPERLMEVIRDELLAVREQYGDE----RPPEISASSAEINIE 532
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLI +D+V+TLS+ GY+K QPI++Y AQ+RGGRGK A K+E+++ +L +ANTHD IL
Sbjct: 533 DLITPEDVVVTLSHQGYVKYQPITDYEAQRRGGRGKSATRIKEENFVERLLVANTHDTIL 592
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
CFS G++YWLKV+Q+P+ SR +RG+PIIN+ L+ E+IT ILP+ +++ + YVF
Sbjct: 593 CFSTRGKVYWLKVYQLPEASRGARGRPIINLLPLEEGERITAILPV----KEYADDKYVF 648
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
+T+ G VKKT LS FS P SGI A+NL D LIG +TDGS +IMLFSD+GK VRFN
Sbjct: 649 FATADGTVKKTSLSAFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFN 708
Query: 717 ENS------------------------------------------------VRAMGRSAR 728
E S VR MGR+A
Sbjct: 709 EGSAAPMQPMLMSSDDVDGDDESVIDAGNDDDGSDNGEGSESTESKGTFKGVRPMGRTAG 768
Query: 729 GVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNK 788
GV G+RL KV++L+V + ++LTATENGYGK T + EY +RGT+G+ SIK ++
Sbjct: 769 GVRGIRLLNGDKVVSLIVPRGEG-AILTATENGYGKGTALTEYPTKSRGTQGVRSIKVDE 827
Query: 789 RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848
+GK V+ V+ +IMLIT GG L+RTRVSE+ +GR+T GV LI + G+QR
Sbjct: 828 -DGK-VSIDQVDDTDQIMLITNGGTLVRTRVSEVSIIGRNTGGVRLIRTGEDETVVGLQR 885
Query: 849 LCKITMIKKYIPVITIDGPTASGKGTV 875
+ + ++ V+ IDG + G T
Sbjct: 886 IAE--SYEEENDVMAIDGEVSEGTDTA 910
>gi|148244447|ref|YP_001219141.1| DNA gyrase subunit A GyrA [Candidatus Vesicomyosocius okutanii HA]
gi|146326274|dbj|BAF61417.1| DNA gyrase subunit A GyrA [Candidatus Vesicomyosocius okutanii HA]
Length = 861
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/844 (52%), Positives = 618/844 (73%), Gaps = 18/844 (2%)
Query: 11 ILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVV 70
+ +E EM SYL+YAMSVIVGRALPDVRDGLKPVHRRVL+AM + N +N+ + K AR+V
Sbjct: 18 VTIESEMRNSYLEYAMSVIVGRALPDVRDGLKPVHRRVLYAMDVLGNDYNKSYKKSARIV 77
Query: 71 GETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKI 130
G+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGDSAAAMRYTE R+ K+
Sbjct: 78 GDVIGKYHPHGDTAVYDTIVRMAQPFSMRNILIDGQGNFGSVDGDSAAAMRYTEIRMAKL 137
Query: 131 SNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEV 190
S+ELL DL+K+T+DF+ NYDG E EPSVLP R+PNLL NGSSGIAVGMATNIPPHNL EV
Sbjct: 138 SHELLQDLEKDTVDFVDNYDGSESEPSVLPARVPNLLANGSSGIAVGMATNIPPHNLNEV 197
Query: 191 IDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEE 250
I+ L + N + +I++L++I+P PDFPTAGII G S + Y TGKG++ +R +HIE
Sbjct: 198 IEACLKTIENEDITIDELLEIMPGPDFPTAGIINGTSGIRQAYETGKGKIYLRCVSHIEG 257
Query: 251 FNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRN 310
E + +II+ ELPYQVNK L+ KI++LVK+K+++ I+ LRDESDK GM +VIEL+R
Sbjct: 258 ---EEKRSIIVTELPYQVNKAKLIGKIAELVKDKRIDGITGLRDESDKDGMSMVIELRRG 314
Query: 311 EIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFEL 370
E+PE++LN LYK T++Q FG+NM+A+ G PKL+ LK+IL FI HR++V+ RR+IF+L
Sbjct: 315 EVPEVILNNLYKLTEMQTVFGINMVAIDKGIPKLMTLKDILEAFIAHRRDVVTRRSIFDL 374
Query: 371 RKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKN 430
KAR H+LEGL++AL NIDN +++I+S + +A++ +I TW + +++G
Sbjct: 375 NKARNRVHLLEGLSVALYNIDNIVELIKSAPSSTDARSILIAKTWRSSVIIELVGNRDM- 433
Query: 431 YNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ K N+ K LQ + Y+LS Q Q IL + L RLT E+ KI +++ +++++
Sbjct: 434 --AMFKPENLPKELGLQMSGDYQLSQKQVQAILDLKLHRLTGFEKDKIFDEFNELLERIK 491
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
L DIL +R++++I +EL I++ YG N R ++I+ + I+ + EDLIA ++ V+T
Sbjct: 492 YLLDILQTPERLMQVICEELIDIQSNYG----NARMTQILEHNIDLTLEDLIAQEERVVT 547
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K+Q +S+Y+AQ RGG+GK A KDED+++QLFIAN+HD +LCFS++G++YWL
Sbjct: 548 LSHGGYVKAQSLSDYQAQCRGGKGKSATKVKDEDFVDQLFIANSHDIVLCFSSFGKVYWL 607
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+ +P SR SRGKPIIN+ L+ KE I ILP+ F +N++VFM+TS G KKT
Sbjct: 608 KVYDLPMASRISRGKPIINLLPLEKKEIINAILPILK----FDENHFVFMATSSGTCKKT 663
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+NFS PRK GIIA+ L N D LIG +T G +DIMLFS +GK++RF E+ VR +GR+A
Sbjct: 664 ALTNFSKPRKGGIIAIELRNNDQLIGVEITSGEHDIMLFSANGKSIRFKESDVRIVGRTA 723
Query: 728 RGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTN 787
GV G++L KV++L+V+ NQ VLTATE G+GKRT + EY +RG G+ISIKT+
Sbjct: 724 IGVRGIKLVDGDKVVSLIVT-NQDSPVLTATEKGFGKRTHLNEYRVQSRGGSGVISIKTS 782
Query: 788 KRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQ 847
RNGK++ A V E+MLI+ GIL+R R +++ +GR+TQGVILI + KL +
Sbjct: 783 DRNGKIIGAIQVTNEDEMMLISNKGILVRARAADVSIIGRNTQGVILINISKDEKLVSIA 842
Query: 848 RLCK 851
++ +
Sbjct: 843 KVVE 846
Score = 43.9 bits (102), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 538 LIASQDM-VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDW--INQLFIANTHDY 594
++ +QD V+T + G+ K ++EYR Q RGG G ++ T D + I + + N D
Sbjct: 741 IVTNQDSPVLTATEKGFGKRTHLNEYRVQSRGGSGVISIKTSDRNGKIIGAIQVTN-EDE 799
Query: 595 ILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNY 654
++ SN G L + + RN++G +IN+ + I ++ ++K + NY
Sbjct: 800 MMLISNKGILVRARAADVSIIGRNTQGVILINISKDEKLVSIAKVVETEDDKSESKSKNY 859
Query: 655 V 655
V
Sbjct: 860 V 860
>gi|325267296|ref|ZP_08133958.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Kingella
denitrificans ATCC 33394]
gi|324981233|gb|EGC16883.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Kingella
denitrificans ATCC 33394]
Length = 902
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/890 (50%), Positives = 631/890 (70%), Gaps = 51/890 (5%)
Query: 2 NQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNR 61
+QFAKE I + LE+EM KSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMHE+ N WN
Sbjct: 7 HQFAKETIPVSLEDEMKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNS 66
Query: 62 PFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMR 121
+ K ARVVG+ +GKYHPHGD ++Y +VRMAQ FS+R LVDGQGNFGS+DGD+AAAMR
Sbjct: 67 AYKKSARVVGDVIGKYHPHGDSAVYQTIVRMAQPFSMRYMLVDGQGNFGSVDGDAAAAMR 126
Query: 122 YTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATN 181
YTE R+ KI++E+L D+++ET++F NYDG E+EP VLPTR P LL+NGS GIAVGMAT+
Sbjct: 127 YTEIRMAKIAHEMLADIEEETVNFGDNYDGSEREPLVLPTRFPALLVNGSEGIAVGMATS 186
Query: 182 IPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVI 241
IPPHNL + + G L +L++PE I++LI I+ APDFPT IYGL+ + GY TG+GRV+
Sbjct: 187 IPPHNLRDTLAGCLKLLNDPETGIDELIDIVKAPDFPTGATIYGLTGIRAGYQTGRGRVV 246
Query: 242 IRAKTHIEEFNREN-RTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IR+K+HIE + R AI++DE+PYQVNK L+EKI +LV+EK +E I+ LRDESDK G
Sbjct: 247 IRSKSHIEPIGKNGEREAIVVDEIPYQVNKSKLVEKIGELVREKTVEGIAELRDESDKDG 306
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
RIVIELKR E E+VLN+LYK TQLQ+TF +NM+ALV+GQP+LLNLK+IL F+ HR+E
Sbjct: 307 TRIVIELKRGENAEVVLNQLYKLTQLQDTFSINMVALVDGQPRLLNLKQILNEFLRHRRE 366
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+F L+KAR HI EG +AL+NID I +I++++ A+ ++ W V
Sbjct: 367 VVTRRTLFRLKKARAEGHIAEGKAVALSNIDEMIALIKASADVDAAREALMGRAWQSALV 426
Query: 421 SKIIGFNKKNYNTISKINNISKLQ--NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
S+++ + + T+++ + + + + D Y LSD QA+ IL+M L+ LT ++Q +I+ +
Sbjct: 427 SEMLSRSDLDL-TLARPEWLPENRGLHPDGYWLSDEQARAILRMSLRNLTGLDQDEIVKE 485
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEI-ILNAINPSTED 537
Y++++ ++DL DIL+ +R+ +II EL ++ ++G RRSEI + + ED
Sbjct: 486 YKSLMDIIMDLLDILAKPERVRQIIEGELVEMQTQFGDE----RRSEINPFGGGDIADED 541
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI ++MV+TL++ GYIK+QP S+Y+AQKRGGRGK+A TKDED+I LF+ANTHDY++C
Sbjct: 542 LIPPREMVVTLTHGGYIKTQPTSDYQAQKRGGRGKQAAATKDEDFIETLFVANTHDYLMC 601
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F+N GR +W+KV+++P+G RNSRG+PI N+ L + EK++ ILP+ R+FP++ YVF
Sbjct: 602 FTNLGRCHWIKVYRLPEGGRNSRGRPINNVIQLDDGEKVSAILPV----REFPEDEYVFF 657
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T++G+VKK LS F N GI A+ L D L+G A T GS DIMLFS+ GKA+RFNE
Sbjct: 658 ATAMGVVKKVQLSAFKNVSVKGIKAIALKEGDSLVGVAKTSGSSDIMLFSNLGKAIRFNE 717
Query: 718 NSVRAMG---------------------------RSARGV----------IGMRLEKKQK 740
G ++ +GV GMRL + +
Sbjct: 718 YWAGGAGDEDEAENDVSGSLQQDEEDGGETEFNLQTNKGVRPSGRGSGGLRGMRLPENGR 777
Query: 741 VIALLVSN-NQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLV 799
+++LL + VLTAT+NGYGKRT I +YT+ +G +GII+I T +RNG+++ A LV
Sbjct: 778 IVSLLTAEIGSDLQVLTATQNGYGKRTPIADYTRKGKGGQGIIAIDTGERNGELIGAVLV 837
Query: 800 NRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
+ ++MLIT+GG+LIRT+V ++R+ GR+ GV LI ++ + L ++R+
Sbjct: 838 SPADDLMLITSGGVLIRTKVEQVRETGRAAAGVRLINLDEGTTLVSLERV 887
>gi|322513992|ref|ZP_08067067.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Actinobacillus ureae
ATCC 25976]
gi|322120218|gb|EFX92176.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Actinobacillus ureae
ATCC 25976]
Length = 895
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/885 (51%), Positives = 624/885 (70%), Gaps = 46/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M++ AK++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + +N +N
Sbjct: 1 MSELAKDITPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTFN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R VK ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAM
Sbjct: 61 RSHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI+ ELL DLDKET+D+ NYDGKE P VLPT+IP LL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMQKITQELLTDLDKETVDYSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EV+DG L + N E SI +L++ IP PDFPT II G + + Y TG+G+V
Sbjct: 181 NIPPHNLNEVLDGCLAYIENEEISIEELMRFIPGPDFPTGAIINGRKGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R II+ ELPYQVNK L+EKI++LVK+KK+E IS ++D SDK G
Sbjct: 241 YVRAKASVETTEK-GREQIIVTELPYQVNKAKLIEKIAELVKDKKIEGISGIQDHSDKKG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+ IVIE+KR+ + E+VLN LY TQ+Q TFG+NM+AL +GQPK+LNLK+I+ F+ HR+E
Sbjct: 300 ISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPKVLNLKQIIEAFVKHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKARE AHILEGL IAL NID I++IR++ T EA+ ++ W L +V
Sbjct: 360 VVTRRTIFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLARAWALGNV 419
Query: 421 SKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIIN 477
+ ++ G + + + + Q Y LS+ QA+ IL++ L RLT +E +KI++
Sbjct: 420 APMLEAAGVDASRPEDLPENLGVRDGQ----YYLSEAQARAILELRLHRLTGLEHEKIVD 475
Query: 478 KYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTED 537
+Y ++ ++ +L ILS+++R++E+I +EL +K ++G RR+EI + + + ED
Sbjct: 476 EYRALLTEIGELLHILSSAERLMEVIREELEKVKAEFGDE----RRTEITAASGDINMED 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I +L + NTHD ILC
Sbjct: 532 LIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVVNTHDTILC 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSL--KNKEKITVILPLSNNKRDFPKNNYV 655
FS+ GRLY LKV+Q+PQ SR +RG PI+N+ L + E+IT ILP+ N +F + ++
Sbjct: 592 FSSRGRLYQLKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNG--EFSADKFI 649
Query: 656 FMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRF 715
FM+T+ G+VKK L FSN R SG+IA+ L D LIG +TDG +IMLFS G+ VRF
Sbjct: 650 FMATASGVVKKVSLDAFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRF 709
Query: 716 NENSVRAMGRSARGVIGMRLEKKQ-----------------------------KVIALLV 746
E +VRAMGR+A GV G++L + +V++L++
Sbjct: 710 AEKAVRAMGRTATGVRGIKLATTEISSEEIEDAEIVEIENEEADESSVSLDTDRVVSLVI 769
Query: 747 SNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
+ +LT T+NG+GKRT+I EY +R TKG++SIK N+RNGKVVAA V + +IM
Sbjct: 770 PRTEG-DILTVTQNGFGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEKADQIM 828
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCK 851
LIT G L+RTRV+E+ +GR+TQGV +I + + V+R+C+
Sbjct: 829 LITDAGTLVRTRVAEVSLVGRNTQGVRIIRTADDESVVSVERVCE 873
>gi|418355006|ref|ZP_12957727.1| DNA gyrase, A subunit [Vibrio cholerae HC-61A1]
gi|424621837|ref|ZP_18060360.1| DNA gyrase, A subunit [Vibrio cholerae HC-47A1]
gi|443531233|ref|ZP_21097248.1| DNA gyrase, A subunit [Vibrio cholerae HC-7A1]
gi|356453408|gb|EHI06071.1| DNA gyrase, A subunit [Vibrio cholerae HC-61A1]
gi|395972382|gb|EJH81976.1| DNA gyrase, A subunit [Vibrio cholerae HC-47A1]
gi|443458316|gb|ELT25712.1| DNA gyrase, A subunit [Vibrio cholerae HC-7A1]
Length = 873
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/859 (52%), Positives = 608/859 (70%), Gaps = 42/859 (4%)
Query: 22 LDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHG 81
+DYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN+ + K ARVVG+ +GKYHPHG
Sbjct: 1 MDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSARVVGDVIGKYHPHG 60
Query: 82 DVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKE 141
D+++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAMRYTE R++KI++ELL DLDKE
Sbjct: 61 DIAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRMSKIAHELLADLDKE 120
Query: 142 TIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNP 201
T+D++ NYDG E+ P+VLPT+IPNLLING+SGIAVGMATNIPPHNL EVIDG L + N
Sbjct: 121 TVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNLGEVIDGCLAYIDNE 180
Query: 202 ECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIII 261
+I++L+ IP PDFPTA +I G + D Y TG+G+V +R+K IE ++ + II+
Sbjct: 181 AITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKAEIET-DKNGKETIIV 239
Query: 262 DELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLY 321
E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK GMRIVIE KR+ + E+VLN LY
Sbjct: 240 SEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIECKRDAVGEVVLNNLY 299
Query: 322 KQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILE 381
TQLQ TFG+NM+AL NGQPKL NLKE+L F+ HR+EV+ RRTIFELRKARE AHILE
Sbjct: 300 ANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTIFELRKARERAHILE 359
Query: 382 GLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII---GFNKKNYNTISKIN 438
GL +AL NID I++IR +TP EAK +I W+L +V+ ++ G + +
Sbjct: 360 GLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERAGTDAARPEWLEPQY 419
Query: 439 NISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKR 498
I + Y L++ QAQ IL + L +LT +E +KI+++Y+ +++++ L IL++++R
Sbjct: 420 GI----RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAALMHILASTER 475
Query: 499 IIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQP 558
++E+I +EL I+ + + RR+EI + E+LIA +D+V+TLS+ GY+K Q
Sbjct: 476 LMEVIREELEAIRAGF----SDARRTEITAATHDIDMEELIAREDVVVTLSHEGYVKYQL 531
Query: 559 ISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRN 618
+S+Y AQ+RGG+GK A K+ED+I +L +ANTHD IL FS G+ Y +KV+Q+P SR
Sbjct: 532 LSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQLPLASRT 591
Query: 619 SRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKS 678
+RGKPI+N+ L+ E+IT ILP++ +F ++ ++FM+T G VKKT L F+N R +
Sbjct: 592 ARGKPIVNLLPLEENERITAILPVT----EFSEDKFIFMATGDGTVKKTSLDQFANVRAN 647
Query: 679 GIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN-------------------- 718
G+IA+NL +ED LIG +TDG +IMLFS GK VRF E+
Sbjct: 648 GLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQPVLDENGQP 707
Query: 719 -----SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773
VR MGR+A GV GM+L +V++L+V + VLT TENGYGKRT + EY
Sbjct: 708 EIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG-DVLTVTENGYGKRTSLSEYPT 766
Query: 774 HNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVI 833
RGT+G++SIK ++RNG VV A V E M+IT G L+RTRV+E+ ++GR+TQGV
Sbjct: 767 KGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVT 826
Query: 834 LITVENKSKLCGVQRLCKI 852
LI + G+QR+ +I
Sbjct: 827 LIRTSEGESVVGLQRIDEI 845
>gi|21231028|ref|NP_636945.1| DNA gyrase subunit A [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66768967|ref|YP_243729.1| DNA gyrase subunit A [Xanthomonas campestris pv. campestris str.
8004]
gi|188992081|ref|YP_001904091.1| DNA gyrase subunit A [Xanthomonas campestris pv. campestris str.
B100]
gi|384427508|ref|YP_005636867.1| DNA gyrase subunit A [Xanthomonas campestris pv. raphani 756C]
gi|21112653|gb|AAM40869.1| DNA gyrase subunit A [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574299|gb|AAY49709.1| DNA gyrase subunit A [Xanthomonas campestris pv. campestris str.
8004]
gi|167733841|emb|CAP52047.1| DNA gyrase subunit A [Xanthomonas campestris pv. campestris]
gi|341936610|gb|AEL06749.1| DNA gyrase, A subunit [Xanthomonas campestris pv. raphani 756C]
Length = 899
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/910 (51%), Positives = 638/910 (70%), Gaps = 50/910 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYLMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D++KET+DF NYD KE EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIEKETVDFQPNYDEKELEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE I L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDIEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVADN-GREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L N Y+LS++QA +IL+M L RLT +EQ+K+ ++Y+
Sbjct: 420 GALLGAAGAEASKPEDLAPGVGLSNG-FYQLSEVQASQILEMRLHRLTGLEQEKLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
+++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + DLI
Sbjct: 479 QLLEVIQGLIRILENPDVLLQVIRDELINIREEYGDARRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F+
Sbjct: 534 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V Q+P+ N+RG+PIIN L++ E++ +LP+ R++ N YVF +T
Sbjct: 594 SSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPV----REYADNRYVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E++
Sbjct: 650 RNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGEST 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVS-------------------------------- 747
VR+MGR+A GV G+RL K ++V++L+VS
Sbjct: 710 VRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDV 769
Query: 748 --NNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEI 805
N +LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E+
Sbjct: 770 ADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEV 829
Query: 806 MLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL-CKITMIKKYIP---V 861
+LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL + + +
Sbjct: 830 LLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERLDASLEEPEDVVDEAVA 889
Query: 862 ITIDGPTASG 871
IT D P A G
Sbjct: 890 ITSDAPPAEG 899
>gi|325915462|ref|ZP_08177776.1| DNA gyrase subunit A [Xanthomonas vesicatoria ATCC 35937]
gi|325538344|gb|EGD10026.1| DNA gyrase subunit A [Xanthomonas vesicatoria ATCC 35937]
Length = 902
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/884 (51%), Positives = 630/884 (71%), Gaps = 46/884 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVADN-GREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIYELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L N Y+LS++QA +IL+M L RLT +EQ+K+ ++Y+
Sbjct: 420 GALLGAAGAEASKPEDLAPGVGLANG-FYQLSEVQASQILEMRLHRLTGLEQEKLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
+++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + DLI
Sbjct: 479 QLLEVIQGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F+
Sbjct: 534 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V Q+P+ N+RG+PIIN L++ E++ +LP+ R++ N YVF +T
Sbjct: 594 SSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPV----REYADNRYVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT LS F+ G IA+NL + D L+G ALTDG D++LF+ +GK VRF E++
Sbjct: 650 RNGTVKKTPLSEFAFRLARGKIAINLDDGDALVGVALTDGDRDVLLFASNGKTVRFGEST 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQK---------------------------- 751
VR+MGR+A GV G+R+ K ++V++L+VS+
Sbjct: 710 VRSMGRTATGVRGIRMPKGEEVVSLIVSDPAGGIEIESDEDAADEVVDTTDGADAAVIDV 769
Query: 752 ------QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEI 805
+LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E+
Sbjct: 770 ADDGNVAYILTATENGYGKRTPLTEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDEV 829
Query: 806 MLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
+LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 830 LLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|160872886|ref|ZP_02063018.1| DNA gyrase, A subunit [Rickettsiella grylli]
gi|159121685|gb|EDP47023.1| DNA gyrase, A subunit [Rickettsiella grylli]
Length = 859
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/845 (53%), Positives = 620/845 (73%), Gaps = 14/845 (1%)
Query: 5 AKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFV 64
A E+ SI +E+E+ +SYL YAMSVIVGRALPD RDGLKPVHRRVLFAM+E+ N WN+P
Sbjct: 6 ANEITSITVEKELKQSYLAYAMSVIVGRALPDSRDGLKPVHRRVLFAMNELGNDWNKPHK 65
Query: 65 KCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTE 124
K ARVVG+ +GKYHPHGD +IYD +VRMAQ FS+R L+DGQGNFGS+DGDSAA+MRYTE
Sbjct: 66 KSARVVGDVIGKYHPHGDAAIYDTIVRMAQRFSMRAVLIDGQGNFGSVDGDSAASMRYTE 125
Query: 125 CRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPP 184
R++K+++ LL DL KET+DF+ NYD E PSVLPTR+PNLL+NGSSGIAVGMATNIPP
Sbjct: 126 IRMSKLAHALLADLAKETVDFVPNYDETEHIPSVLPTRVPNLLVNGSSGIAVGMATNIPP 185
Query: 185 HNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRA 244
HNL EVID + +L++ E SI L+ I PDFPTAG+IYG + + Y+TG+GR+ +RA
Sbjct: 186 HNLAEVIDACVALLNDSELSIERLMHFIKGPDFPTAGLIYGKQGIIEAYHTGRGRLFVRA 245
Query: 245 KTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIV 304
+ IE+ + N+ II+ ELPYQVNK L+EKI++LVKEK++E I+ LRDESDK GMR+V
Sbjct: 246 RVQIEQDEKSNKQRIIVTELPYQVNKAKLIEKIAELVKEKRIEGITALRDESDKDGMRVV 305
Query: 305 IELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKR 364
IE+KR E +++LN L+ QTQLQ TFG+NM+ALV+G+P LLNLK+++ F+ HR+EV+ R
Sbjct: 306 IEVKRGENVDVLLNNLFSQTQLQVTFGINMVALVDGRPVLLNLKQLISEFLAHRREVVTR 365
Query: 365 RTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII 424
RTIFELRKARE AH+LEGL IAL NID I +I++ P EAK++++ W+L V++++
Sbjct: 366 RTIFELRKARERAHLLEGLGIALANIDLMIGLIKAAKDPAEAKSQLLAQDWSLGLVAEML 425
Query: 425 GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIK 484
K + + K +++ Y+LS QAQ IL + L RLT +EQ+KI+ +Y +
Sbjct: 426 ---TKTDDWAEHEYGVKK--DSNTYRLSPEQAQAILDLRLHRLTGLEQEKILKEYREQLT 480
Query: 485 KVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDM 544
+IDL DIL+ +R+ +I +EL IK ++ + RR+EII + EDLI ++D+
Sbjct: 481 IIIDLLDILNQPERLCRVIQEELIAIKEEF----LDPRRTEIITVDAEINEEDLIPAEDV 536
Query: 545 VITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRL 604
V+TLS+ GY+K Q + Y AQ+RGGRGK + K+ED+I L IANTH +LCFS+ G++
Sbjct: 537 VVTLSHEGYVKRQSLDVYHAQRRGGRGKSSGDVKEEDFIEHLLIANTHATLLCFSSIGKV 596
Query: 605 YWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIV 664
YWLKV+++P+GSR ++G+PIIN+ +L E+IT +LP+ N + +++FM+T G
Sbjct: 597 YWLKVYKLPEGSRIAKGRPIINLLALGENERITAVLPIQN----YSAEHFIFMATMKGTT 652
Query: 665 KKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMG 724
KKT L +FS PR GIIA++L + D L+G ALTDG D++LF+D+GK +RFNE++VR MG
Sbjct: 653 KKTSLIDFSRPRHDGIIAIDLRDHDRLVGVALTDGQQDVLLFTDAGKVIRFNESNVRCMG 712
Query: 725 RSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISI 784
R+A GV G++L++ Q+VI+L+++ +LTAT +GYGK T + ++ +RG G+I+I
Sbjct: 713 RTACGVRGIKLQEGQRVISLIIAKPYGL-ILTATRHGYGKCTPVHDHRLTSRGGSGVIAI 771
Query: 785 KTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLC 844
KT RNG+VVAA V E+MLIT L+RTRV+EIR R +QGV LI + L
Sbjct: 772 KTTARNGQVVAAVQVLPSDEVMLITNKATLVRTRVAEIRVASRHSQGVRLIRLNEGETLV 831
Query: 845 GVQRL 849
G++R+
Sbjct: 832 GLERI 836
>gi|71892249|ref|YP_277983.1| DNA gyrase, subunit A [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796355|gb|AAZ41106.1| DNA gyrase, subunit A [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 843
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/851 (53%), Positives = 615/851 (72%), Gaps = 18/851 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MN FAKE+ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRR+LFAM + N WN
Sbjct: 1 MNDFAKEITQINIEEELTHSYLDYAMSVIVGRALPDVRDGLKPVHRRILFAMQVLGNCWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ F +R LVDGQGNFGS+DGD AAAM
Sbjct: 61 RNYKKSARVVGDVIGKYHPHGDTAVYETIVRMAQPFLMRYALVDGQGNFGSVDGDPAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+NELL+DLDKET+D+ NYDG E P +LP RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIANELLLDLDKETVDYELNYDGTESIPGILPARIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G L + N + +I +L+K IP PDFPTA II + + Y TG+G++
Sbjct: 181 NIPPHNLSEVINGCLAFIDNEDITIEELMKYIPGPDFPTAAIINDSGGLKEAYSTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA++ IE + R +I+I E+PYQVNK LLEKI++L K K++E I NLRDESDK G
Sbjct: 241 YIRARSEIETDVKSGRESIVIYEIPYQVNKARLLEKIAELAKLKRIEGIYNLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR+ I E++LN LY T LQ +FG+NM+AL GQPK+++LK+IL F+ HR+
Sbjct: 301 MRIVVEIKRDAISEVILNNLYSLTSLQTSFGINMVALHQGQPKIMSLKDILSAFVCHRRA 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR FEL+KAR HILEGL IAL NID+ I++IR +++ EA + +I S+WN+ +V
Sbjct: 361 VVIRRVTFELKKARSRIHILEGLAIALFNIDSVIKLIRQSNSSVEASSVLISSSWNIGNV 420
Query: 421 SKIIGFNKKNYNTI----SKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
F+ K +I S+ + + +N+ Y L+ QAQ IL + L +LT +E +K++
Sbjct: 421 -----FDMKQRTSINLMKSEGSEVKNAVHNNQYCLTKNQAQAILDLKLHKLTTLEYEKLL 475
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
+Y ++++K+ +L IL + K ++ +I EL +I+ +Y RR+EI N N + E
Sbjct: 476 QEYSSLLEKIKNLISILKDPKCLMRVIRQELLMIQEEYNDS----RRTEISSNIENINVE 531
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
+LI +D+V+TLS GY+K QP+++Y AQKRGG+GK A K+ED+I +L IANTHD +L
Sbjct: 532 NLINQKDVVVTLSYQGYVKYQPLTDYEAQKRGGKGKLATRIKEEDFITRLLIANTHDTVL 591
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
FSNYGR+YW+KV+++P SR SRGKPIIN+ L E+IT ILP+ N + + VF
Sbjct: 592 LFSNYGRIYWMKVYRLPAASRGSRGKPIINLLPLDVNERITAILPIQN----YTTGHQVF 647
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
M+TS G+VKKT L+ FS PR GIIA+NL++ D LIGA +TDGS ++MLF+ GK VRF
Sbjct: 648 MATSSGVVKKTPLTEFSRPRNVGIIALNLNDGDELIGADVTDGSNEVMLFTAYGKVVRFK 707
Query: 717 ENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNR 776
E VR++GRSA GV G+ L + +V++L++ + K S+LT T NG+GKRT EY +R
Sbjct: 708 ETQVRSVGRSAIGVKGIHLLQGDRVVSLIIPKD-KSSILTVTRNGFGKRTNQSEYPIKSR 766
Query: 777 GTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILIT 836
T+G+ISIK +RNG V+ A VN+ +I++IT G L+RTRVSE+ + R+TQGV+LI
Sbjct: 767 ATQGVISIKVTERNGNVIGAVQVNQSDQIVMITDLGRLVRTRVSEVNIIRRNTQGVMLIR 826
Query: 837 VENKSKLCGVQ 847
+ G+Q
Sbjct: 827 TACNECVVGLQ 837
>gi|384418822|ref|YP_005628182.1| DNA gyrase subunit A [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461735|gb|AEQ96014.1| DNA gyrase, A subunit [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 898
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/885 (51%), Positives = 629/885 (71%), Gaps = 48/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE+EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKEQEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AII+ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVAD-NGREAIIVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKI-NNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++G + + + +Q Y+LS++QA +IL+M L RLT +EQ+K+ ++Y
Sbjct: 420 GALLGAAGAEASKPEDLPPGVGLIQG--FYQLSEVQASQILEMRLHRLTGLEQEKLTDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDL 538
+ ++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + DL
Sbjct: 478 KQLLGVIEGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDIL-----DL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F
Sbjct: 533 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
++ G+++WL V Q+P+ N+RG+PIIN L+ E++ +LP+ R++ N YVF +
Sbjct: 593 TSSGKVFWLPVHQLPEAGSNARGRPIINWIPLEAGERVQAVLPV----REYVDNRYVFFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E+
Sbjct: 649 TRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGES 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS------------------------- 753
+VR+MGR+A GV G+RL K ++V++L+V+ +
Sbjct: 709 TVRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGADEEIEADDVDDVVETTDGAETAVIE 768
Query: 754 ---------VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
+LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E
Sbjct: 769 VADDGNVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDE 828
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
++LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 829 VLLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|58582029|ref|YP_201045.1| DNA gyrase subunit A [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84623941|ref|YP_451313.1| DNA gyrase subunit A [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188576360|ref|YP_001913289.1| DNA gyrase subunit A [Xanthomonas oryzae pv. oryzae PXO99A]
gi|58426623|gb|AAW75660.1| DNA gyrase subunit A [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84367881|dbj|BAE69039.1| DNA gyrase subunit A [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188520812|gb|ACD58757.1| DNA gyrase, A subunit [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 898
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/884 (51%), Positives = 627/884 (70%), Gaps = 46/884 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE+EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKEQEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVAD-NGREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L Y+LS++QA +IL+M L RLT +EQ+K+ ++Y+
Sbjct: 420 GALLGAAGAEASKPEDLPPGVGLIKG-FYQLSEVQASQILEMRLHRLTGLEQEKLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + DLI
Sbjct: 479 QLLGVIEGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F+
Sbjct: 534 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V Q+P+ N+RG+PIIN L+ E++ +LP+ R++ N YVF +T
Sbjct: 594 SSGKVFWLPVHQLPEAGSNARGRPIINWIPLEAGERVQAVLPV----REYVDNRYVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT LS F+ G IA+NL D LIG ALTDG D++LF+ +GK VRF E++
Sbjct: 650 RNGTVKKTSLSEFAFRLARGKIAINLDEGDALIGVALTDGDRDVLLFASNGKTVRFGEST 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS-------------------------- 753
VR+MGR+A GV G+RL K ++V++L+V+ +
Sbjct: 710 VRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGADEEIEADDVDDVVETTDGAETAVIEV 769
Query: 754 --------VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEI 805
+LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E+
Sbjct: 770 ADDGNVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDEV 829
Query: 806 MLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
+LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 830 LLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|381171379|ref|ZP_09880525.1| DNA gyrase, A subunit [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|380688149|emb|CCG37012.1| DNA gyrase, A subunit [Xanthomonas citri pv. mangiferaeindicae LMG
941]
Length = 899
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/885 (51%), Positives = 629/885 (71%), Gaps = 48/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE+EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKEQEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVADN-GREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMEAVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKI-NNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++G + + + +Q Y+LS++QA +IL+M L RLT +EQ+K+ ++Y
Sbjct: 420 GALLGAAGAEASKPEDLPPGVGLIQG--FYQLSEVQASQILEMRLHRLTGLEQEKLTDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDL 538
+ ++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + DL
Sbjct: 478 KQLLGVIEGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDIL-----DL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F
Sbjct: 533 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
++ G+++WL V Q+P+ N+RG+PIIN L++ E++ +LP+ R++ N YVF +
Sbjct: 593 TSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPV----REYADNRYVFFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E+
Sbjct: 649 TRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGES 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVS------------------------------- 747
+VR+MGR+A GV G+RL K ++V++L+V+
Sbjct: 709 TVRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGVEEEIEGDEVDDVVEATDGGESAVIE 768
Query: 748 ---NNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
+ +LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E
Sbjct: 769 VADDGNVAYILTATENGYGKRTPLSEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDE 828
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
++LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 829 VLLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|390990027|ref|ZP_10260319.1| DNA gyrase, A subunit [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|372555277|emb|CCF67294.1| DNA gyrase, A subunit [Xanthomonas axonopodis pv. punicae str. LMG
859]
Length = 899
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/885 (51%), Positives = 629/885 (71%), Gaps = 48/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE+EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKEQEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVADN-GREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMEAVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKI-NNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++G + + + +Q Y+LS++QA +IL+M L RLT +EQ+K+ ++Y
Sbjct: 420 GALLGAAGAEASKPEDLPPGVGLIQG--FYQLSEVQASQILEMRLHRLTGLEQEKLTDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDL 538
+ ++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + DL
Sbjct: 478 KQLLGVIEGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDIL-----DL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F
Sbjct: 533 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
++ G+++WL V Q+P+ N+RG+PIIN L++ E++ +LP+ R++ N YVF +
Sbjct: 593 TSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPV----REYADNRYVFFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E+
Sbjct: 649 TRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGES 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVS------------------------------- 747
+VR+MGR+A GV G+RL K ++V++L+V+
Sbjct: 709 TVRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGVEEEIEGDEVDDVVEATDGGESAVIE 768
Query: 748 ---NNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
+ +LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E
Sbjct: 769 VADDGNVAYILTATENGYGKRTPLTEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDE 828
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
++LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 829 VLLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|294626374|ref|ZP_06704976.1| DNA gyrase subunit A [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|294665966|ref|ZP_06731230.1| DNA gyrase subunit A [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292599375|gb|EFF43510.1| DNA gyrase subunit A [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292604269|gb|EFF47656.1| DNA gyrase subunit A [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 899
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/885 (51%), Positives = 629/885 (71%), Gaps = 48/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE+EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKEQEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVADN-GREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMEAVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKI-NNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++G + + + +Q Y+LS++QA +IL+M L RLT +EQ+K+ ++Y
Sbjct: 420 GALLGAAGAEASKPEDLPPGVGLIQG--FYQLSEVQASQILEMRLHRLTGLEQEKLTDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDL 538
+ ++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + DL
Sbjct: 478 KQLLGVIEGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDIL-----DL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F
Sbjct: 533 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
++ G+++WL V Q+P+ N+RG+PIIN L++ E++ +LP+ R++ N YVF +
Sbjct: 593 TSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPV----REYADNRYVFFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E+
Sbjct: 649 TRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGES 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVS------------------------------- 747
+VR+MGR+A GV G+RL K ++V++L+V+
Sbjct: 709 TVRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGVEEEIEGDEVDDVVEATDGSESAVIE 768
Query: 748 ---NNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
+ +LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E
Sbjct: 769 VADDGNVAYILTATENGYGKRTPLTEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDE 828
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
++LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 829 VLLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|346724513|ref|YP_004851182.1| DNA gyrase subunit A [Xanthomonas axonopodis pv. citrumelo F1]
gi|346649260|gb|AEO41884.1| DNA gyrase subunit A [Xanthomonas axonopodis pv. citrumelo F1]
Length = 899
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/885 (51%), Positives = 627/885 (70%), Gaps = 48/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE+EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKEQEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVAD-NGREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMEAVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKI-NNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++G + + + +Q Y+LS++QA +IL+M L RLT +EQ+K+ ++Y
Sbjct: 420 GALLGAAGAEASKPEDLPPGVGLIQG--FYQLSEVQASQILEMRLHRLTGLEQEKLTDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDL 538
+ ++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + DL
Sbjct: 478 KQLLGVIEGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDIL-----DL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F
Sbjct: 533 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
++ G+++WL V Q+P+ N+RG+PIIN L+ E++ +LP+ R++ N YVF +
Sbjct: 593 TSSGKVFWLPVHQLPEAGSNARGRPIINWIPLEAGERVQAVLPV----REYADNRYVFFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E+
Sbjct: 649 TRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGES 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS------------------------- 753
+VR+MGR+A GV G+RL K ++V++L+V+
Sbjct: 709 TVRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGVEEEIEGEEVDDVVEATDGGESAVIE 768
Query: 754 ---------VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
+LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E
Sbjct: 769 VADDGNVAYILTATENGYGKRTPLTEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDE 828
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
++LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 829 VLLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|78047228|ref|YP_363403.1| DNA gyrase subunit A [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78035658|emb|CAJ23349.1| DNA gyrase subunit A [Xanthomonas campestris pv. vesicatoria str.
85-10]
Length = 900
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/885 (51%), Positives = 627/885 (70%), Gaps = 48/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE+EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKEQEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVAD-NGREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMEAVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKI-NNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++G + + + +Q Y+LS++QA +IL+M L RLT +EQ+K+ ++Y
Sbjct: 420 GALLGAAGAEASKPEDLPPGVGLIQG--FYQLSEVQASQILEMRLHRLTGLEQEKLTDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDL 538
+ ++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + DL
Sbjct: 478 KQLLGVIEGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDIL-----DL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F
Sbjct: 533 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
++ G+++WL V Q+P+ N+RG+PIIN L+ E++ +LP+ R++ N YVF +
Sbjct: 593 TSSGKVFWLPVHQLPEAGSNARGRPIINWIPLEAGERVQAVLPV----REYADNRYVFFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E+
Sbjct: 649 TRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGES 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS------------------------- 753
+VR+MGR+A GV G+RL K ++V++L+V+
Sbjct: 709 TVRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGVEEEIEGEEVDDVVEATDGGESAVIE 768
Query: 754 ---------VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
+LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E
Sbjct: 769 VADDGNVAYILTATENGYGKRTPLTEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDE 828
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
++LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 829 VLLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|21242381|ref|NP_641963.1| DNA gyrase subunit A [Xanthomonas axonopodis pv. citri str. 306]
gi|418517871|ref|ZP_13084028.1| DNA gyrase subunit A [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|418519897|ref|ZP_13085948.1| DNA gyrase subunit A [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|21107819|gb|AAM36499.1| DNA gyrase subunit A [Xanthomonas axonopodis pv. citri str. 306]
gi|410704557|gb|EKQ63039.1| DNA gyrase subunit A [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410705454|gb|EKQ63927.1| DNA gyrase subunit A [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 899
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/885 (51%), Positives = 629/885 (71%), Gaps = 48/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE+EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKEQEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVADN-GREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMEAVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKI-NNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++G + + + +Q Y+LS++QA +IL+M L RLT +EQ+K+ ++Y
Sbjct: 420 GALLGAAGAEASKPEDLPPGVGLIQG--FYQLSEVQAAQILEMRLHRLTGLEQEKLTDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDL 538
+ ++ + L IL N ++++I DEL ++ +YG ++ IR SE L+ + DL
Sbjct: 478 KQLLGVIEGLIRILENPDVLLQVIRDELINVREEYGDERRTEIRHSEEDLDIL-----DL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F
Sbjct: 533 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
++ G+++WL V Q+P+ N+RG+PIIN L++ E++ +LP+ R++ N YVF +
Sbjct: 593 TSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPV----REYADNRYVFFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E+
Sbjct: 649 TRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGES 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVS------------------------------- 747
+VR+MGR+A GV G+RL K ++V++L+V+
Sbjct: 709 TVRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGVEEEIEGDEVDDVVEATDGGESAVIE 768
Query: 748 ---NNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
+ +LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E
Sbjct: 769 VADDGNVAYILTATENGYGKRTPLTEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDE 828
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
++LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 829 VLLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|289663149|ref|ZP_06484730.1| DNA gyrase subunit A [Xanthomonas campestris pv. vasculorum NCPPB
702]
gi|289669584|ref|ZP_06490659.1| DNA gyrase subunit A [Xanthomonas campestris pv. musacearum NCPPB
4381]
Length = 899
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/884 (51%), Positives = 626/884 (70%), Gaps = 46/884 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D++KET+DF NYD KE+EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIEKETVDFQPNYDEKEQEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R A+++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKAEVEVADN-GREAVVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMEAVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L Y+LS++QA +IL+M L RLT +EQ+K+ ++Y+
Sbjct: 420 GALLGAAGAEASKPEDLPPGVGLIKG-FYQLSEVQASQILEMRLHRLTGLEQEKLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + DLI
Sbjct: 479 QLLGVIEGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F+
Sbjct: 534 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V Q+P+ N+RG+PIIN L+ E++ +LP+ R++ N YVF +T
Sbjct: 594 SSGKVFWLPVHQLPEAGSNARGRPIINWIPLEPGERVQAVLPV----REYADNRYVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E++
Sbjct: 650 RNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGEST 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVS-------------------------------- 747
VR+MGR+A GV G+RL K ++V++L+V+
Sbjct: 710 VRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGVEEEIEADDVDDVVETTDGAEAAVIEV 769
Query: 748 --NNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEI 805
+ +LTATENG+GKRT + EY + RGT+G+I I+T +RNGK+V A L+ E+
Sbjct: 770 ADDGNVAYILTATENGFGKRTPLTEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDEV 829
Query: 806 MLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
+LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 830 LLISDGGTLVRTRASEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|325928151|ref|ZP_08189360.1| DNA gyrase subunit A [Xanthomonas perforans 91-118]
gi|325541447|gb|EGD12980.1| DNA gyrase subunit A [Xanthomonas perforans 91-118]
Length = 900
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/885 (51%), Positives = 627/885 (70%), Gaps = 48/885 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHE+ N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE+EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKEQEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK +E + R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RIRAKADVEVAD-NGREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMEAVFGINMVALIDGRPQLMNLKQMLEAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKI-NNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
++G + + + +Q Y+LS++QA +IL+M L RLT +EQ+K+ ++Y
Sbjct: 420 GALLGAAGAEASKPEDLPPGVGLIQG--FYQLSEVQASQILEMRLHRLTGLEQEKLTDEY 477
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDL 538
+ ++ + L IL N +++++ DEL I+ +YG ++ IR SE L+ + DL
Sbjct: 478 KQLLGVIEGLIRILENPDVLLQVVRDELINIREEYGDERRTEIRHSEEDLDIL-----DL 532
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
IA +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F
Sbjct: 533 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTF 592
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
++ G+++WL V Q+P+ N+RG+PIIN L+ E++ +LP+ R++ N YVF +
Sbjct: 593 TSSGKVFWLPVHQLPEAGSNARGRPIINWIPLEAGERVQAVLPV----REYADNRYVFFA 648
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E+
Sbjct: 649 TRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGES 708
Query: 719 SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQS------------------------- 753
+VR+MGR+A GV G+RL K ++V++L+V+
Sbjct: 709 TVRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGVEEEIEGEEVDDVVEATDGGESAVIE 768
Query: 754 ---------VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804
+LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+ E
Sbjct: 769 VADDGNVAYILTATENGYGKRTPLTEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDE 828
Query: 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
++LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 829 VLLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|319776149|ref|YP_004138637.1| DNA gyrase subunit A [Haemophilus influenzae F3047]
gi|317450740|emb|CBY86960.1| DNA gyrase (type II topoisomerase), subunit A [Haemophilus
influenzae F3047]
Length = 880
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/871 (52%), Positives = 610/871 (70%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKETI+F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETINFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 424 LLDASARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEG-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|94676657|ref|YP_588831.1| DNA gyrase, A subunit [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94219807|gb|ABF13966.1| DNA gyrase, A subunit [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 847
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/862 (51%), Positives = 623/862 (72%), Gaps = 29/862 (3%)
Query: 1 MNQFAKE---VISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNN 57
M++ AK +I + +EEE+ +SYLDYAMSVI+GRALPDVRDGLKPVHRRVLFAM + N
Sbjct: 1 MSELAKANKILIPVSIEEELKRSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMSILGN 60
Query: 58 LWNRPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSA 117
WN+P+ K AR+VG+ +GKYHPH D ++YDA+VRMAQ+FSLR LVDGQGNFGSIDGDSA
Sbjct: 61 DWNKPYKKSARIVGDVIGKYHPHSDTAVYDAIVRMAQTFSLRYMLVDGQGNFGSIDGDSA 120
Query: 118 AAMRYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVG 177
AAMRYTE R++KI++ELLIDL+K+T++++ NYD E+ P V+PTR+PN+LINGSSGIAVG
Sbjct: 121 AAMRYTEVRMSKIAHELLIDLEKDTVNYVPNYDSTEQIPEVMPTRMPNILINGSSGIAVG 180
Query: 178 MATNIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGK 237
MATNIPPHNL E+IDG L + + + SI +L+K IP PDFPTA II G + + Y TG+
Sbjct: 181 MATNIPPHNLFEIIDGCLAYIDDDKISIEELMKYIPGPDFPTAAIINGKQGIEEAYRTGR 240
Query: 238 GRVIIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESD 297
G++ IRA+ +E R I++ E+PYQVNK L+EKI+ L+KEK++E IS LRDESD
Sbjct: 241 GKICIRARAIVEVEANTGREIIVVSEIPYQVNKARLIEKIADLIKEKRIEGISVLRDESD 300
Query: 298 KSGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILH 357
K GMRI+I +KR+ + E+VLN LY TQLQ +F +NM+AL NGQPK+ +LKEIL FI H
Sbjct: 301 KDGMRIIIGIKRDAVAEVVLNNLYSMTQLQVSFSINMVALNNGQPKIFSLKEILSAFICH 360
Query: 358 RKEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNL 417
R+++I RRTIFELRKARE HILE L +A NI++ I + R+ +TP EAK+K++ S WNL
Sbjct: 361 RQDIITRRTIFELRKARERVHILEALVVAQANIESIITLTRNANTPVEAKDKLLISAWNL 420
Query: 418 PDVSKIIGFNKKNYNTISKINNISKLQ--------NNDMYKLSDIQAQEILKMPLQRLTN 469
++ + +++++ + + ++ Y L++ Q Q IL + L LT+
Sbjct: 421 GTIASM---------QCREVHHMVRPEWLEEKYGIHDGRYYLTEKQVQAILDLRLYNLTS 471
Query: 470 MEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILN 529
+E K++ +++ ++ K++DL IL+ +R++E+I +ELN I+ +Y K+ RR+EI
Sbjct: 472 LEYSKLMIEHKELLTKIVDLLRILNEPERLMEVIREELNYIQKQY----KDPRRTEITTI 527
Query: 530 AINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIA 589
+ N ED+I +++V+TLS GY+K QP+++Y AQKRGG+GK A+ K+ED+I+ L +A
Sbjct: 528 SSNLVIEDMINKENVVVTLSYQGYVKYQPLNDYDAQKRGGKGKSAVKMKEEDFIHSLLVA 587
Query: 590 NTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDF 649
NTHD IL FS+ GR+YW+KV+Q+P SR SRG+PI+N+ L+ E+IT ILP+ R +
Sbjct: 588 NTHDTILLFSSRGRMYWMKVYQLPAASRGSRGRPIVNLLPLETNERITTILPV----RQY 643
Query: 650 PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDS 709
+ VFM+T+ G VKKT L FS PR +GIIAVNL D LIG +T+G+ ++MLFS
Sbjct: 644 EEGCNVFMATASGTVKKTALIAFSRPRSAGIIAVNLHEGDELIGVNVTNGNNEVMLFSAY 703
Query: 710 GKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIK 769
GK VRF E VR+MGR+A GV G+ L + +V++L++ N +LT T++GYGKRT
Sbjct: 704 GKVVRFPETQVRSMGRTATGVRGINLAEGDRVVSLIIPNIDGH-ILTVTQHGYGKRTTQN 762
Query: 770 EYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRST 829
EY +R T+G+ISIK ++RNG+V+ A V+ + +IMLIT G L+RTRVSE+ +GR+T
Sbjct: 763 EYPTKSRATQGVISIKASERNGQVIGAIQVDEHDQIMLITDAGTLVRTRVSEVSIVGRNT 822
Query: 830 QGVILITVENKSKLCGVQRLCK 851
QG+ LI + G+QR+ +
Sbjct: 823 QGITLIRTAENEHVVGLQRIAE 844
>gi|190575028|ref|YP_001972873.1| DNA gyrase subunit A [Stenotrophomonas maltophilia K279a]
gi|190012950|emb|CAQ46582.1| putative DNA gyrase subunit A [Stenotrophomonas maltophilia K279a]
Length = 904
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/914 (49%), Positives = 634/914 (69%), Gaps = 48/914 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+N N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELNAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVR+AQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+E I+ + ++ NPE ++ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLSESINACIALIDNPEIDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 RIRAKADIEVADN-GRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L F+ HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR AH+LEGLT+AL NID I++I+++ P EA+ +++ W V
Sbjct: 360 VVTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPNEARERMLARVWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L Y+L++IQA +IL+M L RLT +EQ ++ ++Y+
Sbjct: 420 GAMLGAAGAEASRPEDLPKGVGLIEGG-YQLTEIQATQILEMRLHRLTGLEQDRLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
+++ + L IL + R++++I +EL +K ++G ++ IR SE L+ + DLI
Sbjct: 479 QLLEVIAGLIHILEDPDRLLQVIREELVSVKAEFGDERRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+T+S+ GY+K QP+S YRAQ+RGGRG+ A TK+ED+I QL++ NTHD +L F+
Sbjct: 534 APEDVVVTVSHAGYVKRQPVSVYRAQRRGGRGRSAAATKEEDFIEQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V+Q+P+ N+RG+PIIN L+ E++ +LP+ RD+ +VF +T
Sbjct: 594 SSGKVFWLPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPV----RDYADGQFVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT L F+ G IA+NL D L+G LTDG DI+LF+ +GK VRF E+
Sbjct: 650 KNGTVKKTPLGEFAFRLARGKIAINLDEGDALVGVGLTDGQRDILLFASNGKTVRFGEDK 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQK---------------------------- 751
VR+MGR+A GV G+++ ++V++L+V+ +
Sbjct: 710 VRSMGRTATGVRGIKMPAGEEVVSLIVAESAGGIEDENEDDSGVEEAAANGDAVIEGADD 769
Query: 752 ---QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
Q +LTATENGYGKRT + +Y + RGT+G+I I+T +RNGK+VAA L+ E++LI
Sbjct: 770 ASVQYILTATENGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGSSDEVLLI 829
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI-----TMIKKYIPVIT 863
+ GG L+RTR SEI ++GR+TQGV LI + KL V+R+ + P T
Sbjct: 830 SDGGTLVRTRGSEISRVGRNTQGVTLIRLSKDEKLQAVERMDASIDEDEDEVAAAAPATT 889
Query: 864 IDGPTASGKGTVAQ 877
P A+ AQ
Sbjct: 890 DGAPAAASSEDAAQ 903
>gi|145638835|ref|ZP_01794443.1| DNA gyrase subunit A [Haemophilus influenzae PittII]
gi|145271807|gb|EDK11716.1| DNA gyrase subunit A [Haemophilus influenzae PittII]
gi|309750818|gb|ADO80802.1| DNA gyrase subunit A [Haemophilus influenzae R2866]
Length = 880
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/871 (52%), Positives = 610/871 (70%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVET-N 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATSISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 424 LLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEEISDDNAEASLDLNIDKVVSLVVPKGEG-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|325922433|ref|ZP_08184201.1| DNA gyrase subunit A [Xanthomonas gardneri ATCC 19865]
gi|325547090|gb|EGD18176.1| DNA gyrase subunit A [Xanthomonas gardneri ATCC 19865]
Length = 903
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/886 (51%), Positives = 627/886 (70%), Gaps = 50/886 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMH + N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHVLGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ PE + L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK +E + R AII+ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RMRAKADVEVAD-NGREAIIVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+AL++G+P+L+NLK++L FI HR+E
Sbjct: 300 MRIYIEVKRGESAEVVLNNLYQQTQMESVFGINMVALIDGRPQLMNLKQMLQAFIRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AH+LEGLT+AL NID I++I++++ PQEA+ +++ TW +
Sbjct: 360 VVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTW---EP 416
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ SK ++ Y+L+++QA +IL+M L RLT +EQ+K+ ++
Sbjct: 417 GLVGALLGAAGAEASKPEDLPPGVGLIKGFYQLTEVQASQILEMRLHRLTGLEQEKLTDE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTED 537
Y+ +++ + L IL N ++++I DEL I+ +YG ++ IR SE L+ + D
Sbjct: 477 YKQLLEVIQGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDIL-----D 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI+ +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L
Sbjct: 532 LISPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLT 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F++ G+++WL V+Q+P+ N+RG+PIIN L+ E++ +LP+ R++ N YVF
Sbjct: 592 FTSSGKVFWLPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPV----REYADNRYVFF 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT LS F+ G IA+NL D L+G ALTDG D++LF+ +GK VRF E
Sbjct: 648 ATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVS------------------------------ 747
++VR+MGR+A GV G+RL K ++V++L+V+
Sbjct: 708 STVRSMGRTATGVRGIRLTKGEEVVSLIVAERAAGVESDVEEESVEDVVETTDVADAAVI 767
Query: 748 ----NNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYH 803
N+ +LTATENGYGKRT + EY + RGT+G+I I+T +RNGK+V A L+
Sbjct: 768 EVAENDDTAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGGTD 827
Query: 804 EIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
E++LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+RL
Sbjct: 828 EVLLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERL 873
>gi|145636871|ref|ZP_01792536.1| DNA gyrase subunit A [Haemophilus influenzae PittHH]
gi|145269952|gb|EDK09890.1| DNA gyrase subunit A [Haemophilus influenzae PittHH]
Length = 880
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/871 (52%), Positives = 610/871 (70%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIEAFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 424 LLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 TLTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + + +LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEGE-ILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTR+
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRI 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|418332291|ref|ZP_12943225.1| DNA gyrase, A subunit [Vibrio cholerae HC-06A1]
gi|424613070|ref|ZP_18051873.1| DNA gyrase, A subunit [Vibrio cholerae HC-41A1]
gi|356419102|gb|EHH72660.1| DNA gyrase, A subunit [Vibrio cholerae HC-06A1]
gi|408014911|gb|EKG52527.1| DNA gyrase, A subunit [Vibrio cholerae HC-41A1]
Length = 869
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/855 (52%), Positives = 604/855 (70%), Gaps = 42/855 (4%)
Query: 26 MSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSI 85
MSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN+ + K ARVVG+ +GKYHPHGD+++
Sbjct: 1 MSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDIAV 60
Query: 86 YDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDF 145
YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAMRYTE R++KI++ELL DLDKET+D+
Sbjct: 61 YDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRMSKIAHELLADLDKETVDY 120
Query: 146 ISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSI 205
+ NYDG E+ P+VLPT+IPNLLING+SGIAVGMATNIPPHNL EVIDG L + N +I
Sbjct: 121 VPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNLGEVIDGCLAYIDNEAITI 180
Query: 206 NDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELP 265
++L+ IP PDFPTA +I G + D Y TG+G+V +R+K IE ++ + II+ E+P
Sbjct: 181 DELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKAEIET-DKNGKETIIVSEIP 239
Query: 266 YQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQ 325
YQVNK L+EKI++LVKEKK+E IS LRDESDK GMRIVIE KR+ + E+VLN LY TQ
Sbjct: 240 YQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIECKRDAVGEVVLNNLYANTQ 299
Query: 326 LQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTI 385
LQ TFG+NM+AL NGQPKL NLKE+L F+ HR+EV+ RRTIFELRKARE AHILEGL +
Sbjct: 300 LQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTIFELRKARERAHILEGLAL 359
Query: 386 ALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII---GFNKKNYNTISKINNISK 442
AL NID I++IR +TP EAK +I W+L +V+ ++ G + + I
Sbjct: 360 ALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERAGTDAARPEWLEPQYGI-- 417
Query: 443 LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEI 502
+ Y L++ QAQ IL + L +LT +E +KI+++Y+ +++++ L IL++++R++E+
Sbjct: 418 --RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAALMHILASTERLMEV 475
Query: 503 ITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQPISEY 562
I +EL I+ + + RR+EI + E+LIA +D+V+TLS+ GY+K Q +S+Y
Sbjct: 476 IREELEAIRAGF----SDARRTEITAATHDIDMEELIAREDVVVTLSHEGYVKYQLLSDY 531
Query: 563 RAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGK 622
AQ+RGG+GK A K+ED+I +L +ANTHD IL FS G+ Y +KV+Q+P SR +RGK
Sbjct: 532 EAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQLPLASRTARGK 591
Query: 623 PIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIA 682
PI+N+ L+ E+IT ILP++ +F ++ ++FM+T G VKKT L F+N R +G+IA
Sbjct: 592 PIVNLLPLEENERITAILPVT----EFSEDKFIFMATGDGTVKKTSLDQFANVRANGLIA 647
Query: 683 VNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN------------------------ 718
+NL +ED LIG +TDG +IMLFS GK VRF E+
Sbjct: 648 LNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQPVLDENGQPEIKF 707
Query: 719 -SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VR MGR+A GV GM+L +V++L+V + VLT TENGYGKRT + EY RG
Sbjct: 708 KGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG-DVLTVTENGYGKRTSLSEYPTKGRG 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ +I
Sbjct: 827 SEGESVVGLQRIDEI 841
>gi|417843346|ref|ZP_12489421.1| DNA gyrase subunit A [Haemophilus haemolyticus M21127]
gi|341949825|gb|EGT76424.1| DNA gyrase subunit A [Haemophilus haemolyticus M21127]
Length = 880
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/871 (52%), Positives = 609/871 (69%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 TLLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIEAFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ L+ N + Y LS Q IL++ L RLT + ++++ +YE ++ K+
Sbjct: 424 LLDVSARPDDLEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVVKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEG-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|161830072|ref|YP_001596456.1| DNA gyrase subunit A [Coxiella burnetii RSA 331]
gi|161761939|gb|ABX77581.1| DNA gyrase, A subunit [Coxiella burnetii RSA 331]
Length = 848
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/837 (53%), Positives = 602/837 (71%), Gaps = 17/837 (2%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN+P K AR+VG+ +GK
Sbjct: 17 LKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWNKPNKKSARIVGDVIGK 76
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGDV++YD +VRMAQ FSLR L+DGQGNFGS+DGD+ AAMRYTE RL++ ++ L+
Sbjct: 77 YHPHGDVAVYDTIVRMAQPFSLRYLLIDGQGNFGSVDGDAPAAMRYTEIRLSRFAHALMA 136
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
DLDKET+DF NYD E P+VLPTR+PNLLING+SGIAVGMATNIPPHNL E+I+ L
Sbjct: 137 DLDKETVDFAPNYDETEMAPAVLPTRVPNLLINGASGIAVGMATNIPPHNLNEIINATLA 196
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
++ NP+ ++ +L++ IP PDFPTAGII G + + Y TG+GR+ +RAKT IE + R
Sbjct: 197 LIENPDLNVEELMRHIPGPDFPTAGIINGRNGIVQAYKTGRGRIYVRAKTEIET-TKSGR 255
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
+ I++ ELPYQVNK LLEKI +LV+EK++E IS LRDESDK GMR+VIE+ R + EIV
Sbjct: 256 SLIVVHELPYQVNKARLLEKIGELVREKRIEGISGLRDESDKRGMRMVIEVSRGDNAEIV 315
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LY QTQLQ FG+NM+AL NGQP++LNLK++L F+ HR+EV+ RRT+FELRKARE
Sbjct: 316 LNNLYAQTQLQTVFGINMVALDNGQPRVLNLKQLLSAFLQHRREVVTRRTLFELRKARER 375
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWN---LPDVSKIIGFNKKNYNT 433
AHILEGL +AL NID I +I+ TP AK ++ W + D K G ++ +
Sbjct: 376 AHILEGLGVALANIDEVIALIKKAKTPAIAKENLLAQAWKPGAVADFLKKAGSDRTQPDD 435
Query: 434 ISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDIL 493
++ + K + Y LS QAQ IL + L RLT +E KI +Y +I K+ +L I+
Sbjct: 436 LAAEFGLRK----EGYYLSPAQAQAILDLRLHRLTGLETDKIREEYIAIIDKIEELIAIV 491
Query: 494 SNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGY 553
S+ ++ E+I +EL +K ++G RR+ II + + + EDLI + V+TLS+ GY
Sbjct: 492 SDPDKLHEVIREELIAVKEQFGDE----RRTVIIDDHSDLTHEDLIPEEHRVVTLSHEGY 547
Query: 554 IKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIP 613
IKSQ +S Y+AQ RGGRGK A K++D++ + +AN+HD ILCFS G++YWLKV+Q+P
Sbjct: 548 IKSQSLSSYQAQHRGGRGKLAAAVKEQDFVKNILVANSHDTILCFSTQGKVYWLKVYQVP 607
Query: 614 QGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFS 673
QGSR +RG+PIIN+ L E+I+ ILP+ R + +++VFM+T+ G +KK L+ FS
Sbjct: 608 QGSRIARGRPIINLLPLVKDEQISAILPI----RAYDGSHFVFMATAQGAIKKVSLAEFS 663
Query: 674 NPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGM 733
PR G IA+ L+ D L+G +TDG +IML +D+GKA+RF+E VR MGRSARGV G+
Sbjct: 664 QPRTKGKIALALNEGDRLVGVDITDGKKEIMLVTDAGKAIRFHEKEVREMGRSARGVRGI 723
Query: 734 RLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKV 793
+L+ KQ VIAL+V K ++LTAT +GYG+RT + +Y RG +G+++I+ N RNGKV
Sbjct: 724 KLKAKQNVIALIVV-KPKGNILTATVHGYGQRTALDDYRSTGRGGQGVMAIRINSRNGKV 782
Query: 794 VAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
V+A V +++LI+ G L+RTRV+EI +MGR+TQGV LI + L G++ +
Sbjct: 783 VSAAQVFDDDDVLLISDKGTLVRTRVNEISQMGRNTQGVRLIQLSQDELLVGMEAIS 839
>gi|118578454|ref|YP_899704.1| DNA gyrase subunit A [Pelobacter propionicus DSM 2379]
gi|118501164|gb|ABK97646.1| DNA gyrase subunit A [Pelobacter propionicus DSM 2379]
Length = 843
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/845 (52%), Positives = 613/845 (72%), Gaps = 23/845 (2%)
Query: 9 ISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCAR 68
I++ +E+EM +SY+DYAMSVI+GRALPDVRDGLKPVHRR L+AM++M+N WN+P+ K AR
Sbjct: 9 IAVNIEDEMKRSYMDYAMSVIIGRALPDVRDGLKPVHRRCLYAMYDMSNDWNKPYKKSAR 68
Query: 69 VVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLN 128
VVG+ +GKYHPHGD + YD +VRMAQ FSLR TLVDGQGNFGSIDGD AAMRYTE RL
Sbjct: 69 VVGDVIGKYHPHGDTAAYDTIVRMAQDFSLRYTLVDGQGNFGSIDGDRPAAMRYTEIRLR 128
Query: 129 KISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLT 188
++S+ELL DLDKET+ NY+ + EP+VLP++ PNLLINGS+GIAVGMATNIPPHNL
Sbjct: 129 QLSHELLADLDKETVGMAPNYNDELLEPTVLPSKFPNLLINGSTGIAVGMATNIPPHNLG 188
Query: 189 EVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHI 248
EVIDG++ V++NP+ + +L+ +IP PDFPT IYG + D Y TG+G + IRAK HI
Sbjct: 189 EVIDGIIAVINNPDLAHEELLALIPGPDFPTGATIYGRQGIRDAYTTGRGIIQIRAKAHI 248
Query: 249 EEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELK 308
E + R +II+ ELPYQVNK L+EKI++LVKEKK+E I+ +RDESD+ GMRIV+E+K
Sbjct: 249 EAAKKSERQSIIVTELPYQVNKARLIEKIAELVKEKKIEGIAEIRDESDREGMRIVVEVK 308
Query: 309 RNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIF 368
R++ PE++LN LYK TQ+Q +FG+ +LA+V+ +P++L+L+E++ FI HR EV+ RRT F
Sbjct: 309 RDDNPEVLLNLLYKLTQMQTSFGIILLAIVHNRPRILSLREMIDCFIEHRAEVVTRRTNF 368
Query: 369 ELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNK 428
EL+KA AHILEGL IAL +D I++IRS+ TP EAK ++E +
Sbjct: 369 ELKKALARAHILEGLKIALDWLDAVIELIRSSKTPPEAKQGLMEGAF------------- 415
Query: 429 KNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVID 488
+ ++++ + +D LS+IQAQ IL+M LQRLT +E+ KI+++YE ++K +
Sbjct: 416 ADAEFLARLELPRPVGYDDGVHLSEIQAQAILEMRLQRLTGLERDKILSEYEEIMKLIAR 475
Query: 489 LTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITL 548
L +IL++ + I II EL I++K+G +IRRSEI + S ED I ++MV+T+
Sbjct: 476 LREILASDREIFNIIISELTEIRDKFG----DIRRSEISDTTPDISLEDTIMDEEMVVTI 531
Query: 549 SNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLK 608
S+ GYIK + YR+Q+RGG+GK M T++ED++ QLFIA+T DY+LCF++ GR+YWLK
Sbjct: 532 SHTGYIKRSAVDLYRSQRRGGKGKTGMKTREEDFVEQLFIASTKDYLLCFTDAGRMYWLK 591
Query: 609 VWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTL 668
V++IP+G+R ++GK ++N+ ++ +EKIT ILP+ ++F ++ ++FM+T G+VKKT
Sbjct: 592 VYEIPEGNRTTKGKAVVNLVNVGMEEKITTILPV----KEFSEHTFLFMATRNGVVKKTP 647
Query: 669 LSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728
L +SN R GIIAVNL + D LIG ALTDG+ D+ L S +GKA+RF+E VR+MGR R
Sbjct: 648 LIEYSNVRSGGIIAVNLDDGDKLIGVALTDGTKDVFLASRNGKAIRFSEQDVRSMGRVTR 707
Query: 729 GVIGMRLEKKQKVIALLVSNNQ--KQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKT 786
GV GM L + VI + + +N ++ T ENGYGKRT + EY +RG KGII+IKT
Sbjct: 708 GVRGMNLNEDDHVIGMEIVHNDVVGSTIFTVCENGYGKRTDLDEYRDQSRGGKGIITIKT 767
Query: 787 NKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
N RNG VV V+ +++M+IT G ++R VS +GR+TQGV LIT E K K+ V
Sbjct: 768 NARNGSVVNVMQVSNDNDLMVITDNGKILRVPVSGFSVIGRNTQGVRLITTEEKEKVVAV 827
Query: 847 QRLCK 851
RL +
Sbjct: 828 ARLAE 832
>gi|212212978|ref|YP_002303914.1| DNA gyrase subunit A [Coxiella burnetii CbuG_Q212]
gi|212011388|gb|ACJ18769.1| DNA gyrase subunit A [Coxiella burnetii CbuG_Q212]
Length = 850
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/837 (53%), Positives = 602/837 (71%), Gaps = 17/837 (2%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN+P K AR+VG+ +GK
Sbjct: 19 LKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWNKPNKKSARIVGDVIGK 78
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGDV++YD +VRMAQ FSLR L+DGQGNFGS+DGD+ AAMRYTE RL++ ++ L+
Sbjct: 79 YHPHGDVAVYDTIVRMAQPFSLRYLLIDGQGNFGSVDGDAPAAMRYTEIRLSRFAHALMA 138
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
DLDKET+DF NYD E P+VLPTR+PNLLING+SGIAVGMATNIPPHNL E+I+ L
Sbjct: 139 DLDKETVDFAPNYDETEMAPAVLPTRVPNLLINGASGIAVGMATNIPPHNLNEIINATLA 198
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
++ NP+ ++ +L++ IP PDFPTAGII G + + Y TG+GR+ +RAKT IE + R
Sbjct: 199 LIENPDLNVEELMRYIPGPDFPTAGIINGRNGIVQAYKTGRGRIYVRAKTEIET-TKSGR 257
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
+ I++ ELPYQVNK LLEKI +LV+EK++E IS LRDESDK GMR+VIE+ R + EIV
Sbjct: 258 SLIVVHELPYQVNKARLLEKIGELVREKRIEGISGLRDESDKRGMRMVIEVSRGDNAEIV 317
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LY QTQLQ FG+NM+AL NGQP++LNLK++L F+ HR+EV+ RRT+FELRKARE
Sbjct: 318 LNNLYAQTQLQTVFGINMVALDNGQPRVLNLKQLLSAFLQHRREVVTRRTLFELRKARER 377
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWN---LPDVSKIIGFNKKNYNT 433
AHILEGL +AL NID I +I+ TP AK ++ W + D K G ++ +
Sbjct: 378 AHILEGLGVALANIDEVIALIKKAKTPAIAKENLLAQAWKPGAVADFLKKAGSDRTRPDD 437
Query: 434 ISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDIL 493
++ + K + Y LS QAQ IL + L RLT +E KI +Y +I K+ +L I+
Sbjct: 438 LAAEFGLRK----EGYYLSPAQAQAILDLRLHRLTGLETDKIREEYIAIIDKIEELIAIV 493
Query: 494 SNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGY 553
S+ ++ E+I +EL +K ++G RR+ II + + + EDLI + V+TLS+ GY
Sbjct: 494 SDPDKLHEVIREELIAVKEQFGDE----RRTVIIDDHSDLTHEDLIPEEHRVVTLSHEGY 549
Query: 554 IKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIP 613
IKSQ +S Y+AQ RGGRGK A K++D++ + +AN+HD ILCFS G++YWLKV+Q+P
Sbjct: 550 IKSQSLSSYQAQHRGGRGKLAAAVKEQDFVKNILVANSHDTILCFSTQGKVYWLKVYQVP 609
Query: 614 QGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFS 673
QGSR +RG+PIIN+ L E+I+ ILP+ R + +++VFM+T+ G +KK L+ FS
Sbjct: 610 QGSRIARGRPIINLLPLVKDEQISAILPI----RAYDGSHFVFMATAQGAIKKVSLAEFS 665
Query: 674 NPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGM 733
PR G IA+ L+ D L+G +TDG +IML +D+GKA+RF+E VR MGRSARGV G+
Sbjct: 666 QPRTKGKIALALNEGDRLVGVDITDGKKEIMLVTDAGKAIRFHEKEVREMGRSARGVRGI 725
Query: 734 RLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKV 793
+L+ KQ VIAL+V K ++LTAT +GYG+RT + +Y RG +G+++I+ N RNGKV
Sbjct: 726 KLKAKQNVIALIVV-KPKGNILTATVHGYGQRTALDDYRSTGRGGQGVMAIRINSRNGKV 784
Query: 794 VAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
V+A V +++LI+ G L+RTRV+EI +MGR+TQGV LI + L G++ +
Sbjct: 785 VSAAQVFDDDDVLLISDKGTLVRTRVNEISQMGRNTQGVRLIQLSQDELLVGMEAIS 841
>gi|417846438|ref|ZP_12492444.1| DNA gyrase subunit A [Haemophilus haemolyticus M21639]
gi|341952406|gb|EGT78935.1| DNA gyrase subunit A [Haemophilus haemolyticus M21639]
Length = 880
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/871 (52%), Positives = 609/871 (69%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ L+ N + Y LS Q IL++ L RLT + ++++ +YE ++ K+
Sbjct: 424 LLDVSARPDDLEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVVKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIHEELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGES-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|68250206|ref|YP_249318.1| DNA gyrase subunit A [Haemophilus influenzae 86-028NP]
gi|229845342|ref|ZP_04465474.1| DNA gyrase subunit A [Haemophilus influenzae 6P18H1]
gi|68058405|gb|AAX88658.1| DNA gyrase subunit A [Haemophilus influenzae 86-028NP]
gi|229811795|gb|EEP47492.1| DNA gyrase subunit A [Haemophilus influenzae 6P18H1]
Length = 880
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/871 (52%), Positives = 610/871 (70%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVET-N 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 424 LLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + + +LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEGE-ILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|417840649|ref|ZP_12486759.1| DNA gyrase subunit A [Haemophilus haemolyticus M19501]
gi|341951158|gb|EGT77737.1| DNA gyrase subunit A [Haemophilus haemolyticus M19501]
Length = 880
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/871 (52%), Positives = 609/871 (69%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ L+ N + Y LS Q IL++ L RLT + ++++ +YE ++ K+
Sbjct: 424 LLDVSARPDDLEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVVKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEVSLDLNIDKVVSLVVPKGEG-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|456736578|gb|EMF61304.1| DNA gyrase subunit A [Stenotrophomonas maltophilia EPM1]
Length = 904
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/914 (49%), Positives = 634/914 (69%), Gaps = 48/914 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+N N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELNAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVR+AQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+E I+ + ++ NPE ++ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLSESINACIALIDNPEIDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 RIRAKADIEVADN-GRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L F+ HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR AH+LEGLT+AL NID I++I+++ P EA+ +++ W V
Sbjct: 360 VVTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPNEARERMLARVWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L Y+L++IQA +IL+M L RLT +EQ ++ ++Y+
Sbjct: 420 GAMLGAAGAEASRPEDLPKGVGLIEGG-YQLTEIQATQILEMRLHRLTGLEQDRLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
+++ + L IL + R++++I +EL +K ++G ++ IR SE L+ + DLI
Sbjct: 479 QLLEVIAGLIHILEDPDRLLQVIREELVSVKAEFGDERRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+T+S+ GY+K QP+S YRAQ+RGGRG+ A TK+ED+I QL++ NTHD +L F+
Sbjct: 534 APEDVVVTVSHAGYVKRQPVSVYRAQRRGGRGRSAAATKEEDFIEQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V+Q+P+ N+RG+PIIN L+ E++ +LP+ RD+ +VF +T
Sbjct: 594 SSGKVFWLPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPV----RDYADGQFVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT L F+ G IA+NL D L+G LTDG DI+LF+ +GK VRF E+
Sbjct: 650 KNGTVKKTPLGEFAFRLARGKIAINLDEGDALVGVGLTDGQRDILLFASNGKTVRFGEDK 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQK---------------------------- 751
VR+MGR+A GV G+++ ++V++L+V+ +
Sbjct: 710 VRSMGRTATGVRGIKMPAGEEVVSLIVAESAGGIEDENEDDSGVEEAAANGDAVIEGADD 769
Query: 752 ---QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
Q +LTATENGYGKRT + +Y + RGT+G+I I+T +RNGK+VAA L+ E++LI
Sbjct: 770 ASVQYILTATENGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGSSDEVLLI 829
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI-----TMIKKYIPVIT 863
+ GG L+RTR SEI ++GR+TQGV LI + KL V+R+ + P T
Sbjct: 830 SDGGTLVRTRGSEISRVGRNTQGVTLIRLSKDEKLQAVERMDASIDEDEDEVVAAAPATT 889
Query: 864 IDGPTASGKGTVAQ 877
P A+ AQ
Sbjct: 890 DGAPAAASSEDAAQ 903
>gi|373466701|ref|ZP_09558012.1| DNA gyrase, A subunit [Haemophilus sp. oral taxon 851 str. F0397]
gi|371759959|gb|EHO48664.1| DNA gyrase, A subunit [Haemophilus sp. oral taxon 851 str. F0397]
Length = 880
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/871 (52%), Positives = 609/871 (69%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAAAAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ L+ N + Y LS Q IL++ L RLT + ++++ +YE ++ K+
Sbjct: 424 LLDVSARPDDLEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVVKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEEISDDNAEASLDLNIDKVVSLVVPKGEG-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|229846834|ref|ZP_04466941.1| DNA gyrase subunit A [Haemophilus influenzae 7P49H1]
gi|229810323|gb|EEP46042.1| DNA gyrase subunit A [Haemophilus influenzae 7P49H1]
Length = 884
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/871 (52%), Positives = 610/871 (70%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 424 LLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + + +LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEGE-ILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|148825854|ref|YP_001290607.1| DNA gyrase subunit A [Haemophilus influenzae PittEE]
gi|319896958|ref|YP_004135153.1| DNA gyrase subunit A [Haemophilus influenzae F3031]
gi|148716014|gb|ABQ98224.1| DNA gyrase subunit A [Haemophilus influenzae PittEE]
gi|317432462|emb|CBY80818.1| DNA gyrase (type II topoisomerase), subunit A [Haemophilus
influenzae F3031]
Length = 882
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/871 (52%), Positives = 610/871 (70%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 424 LLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + + +LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEGE-ILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|164685995|ref|ZP_01946409.2| DNA gyrase, A subunit [Coxiella burnetii 'MSU Goat Q177']
gi|165924109|ref|ZP_02219941.1| DNA gyrase, A subunit [Coxiella burnetii Q321]
gi|164601521|gb|EAX32985.2| DNA gyrase, A subunit [Coxiella burnetii 'MSU Goat Q177']
gi|165916448|gb|EDR35052.1| DNA gyrase, A subunit [Coxiella burnetii Q321]
Length = 848
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/837 (53%), Positives = 602/837 (71%), Gaps = 17/837 (2%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN+P K AR+VG+ +GK
Sbjct: 17 LKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWNKPNKKSARIVGDVIGK 76
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGDV++YD +VRMAQ FSLR L+DGQGNFGS+DGD+ AAMRYTE RL++ ++ L+
Sbjct: 77 YHPHGDVAVYDTIVRMAQPFSLRYLLIDGQGNFGSVDGDAPAAMRYTEIRLSRFAHALMA 136
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
DLDKET+DF NYD E P+VLPTR+PNLLING+SGIAVGMATNIPPHNL E+I+ L
Sbjct: 137 DLDKETVDFAPNYDETEMAPAVLPTRVPNLLINGASGIAVGMATNIPPHNLNEIINATLA 196
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
++ NP+ ++ +L++ IP PDFPTAGII G + + Y TG+GR+ +RAKT IE + R
Sbjct: 197 LIENPDLNVEELMRHIPGPDFPTAGIINGRNGIVQAYKTGRGRIYVRAKTEIET-TKSGR 255
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
+ I++ ELPYQVNK LLEKI +LV+EK++E IS LRDESDK GMR+VIE+ R + EIV
Sbjct: 256 SLIVVHELPYQVNKARLLEKIGELVREKRIEGISGLRDESDKRGMRMVIEVSRGDNAEIV 315
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LY QTQLQ FG+NM+AL NGQP++LNLK++L F+ HR+EV+ RRT+FELRKARE
Sbjct: 316 LNNLYAQTQLQTVFGINMVALDNGQPRVLNLKQLLSAFLQHRREVVTRRTLFELRKARER 375
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWN---LPDVSKIIGFNKKNYNT 433
AHILEGL +AL NID I +I+ TP AK ++ W + D K G ++ +
Sbjct: 376 AHILEGLGVALANIDEVIALIKKAKTPAIAKENLLAQAWKPGAVADFLKKAGSDRTRPDD 435
Query: 434 ISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDIL 493
++ + K + Y LS QAQ IL + L RLT +E KI +Y +I K+ +L I+
Sbjct: 436 LAAEFGLRK----EGYYLSPAQAQAILDLRLHRLTGLETDKIREEYIAIIDKIEELIAIV 491
Query: 494 SNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGY 553
S+ ++ E+I +EL +K ++G RR+ II + + + EDLI + V+TLS+ GY
Sbjct: 492 SDPDKLHEVIREELIAVKEQFGDE----RRTVIIDDHSDLTHEDLIPEEHRVVTLSHEGY 547
Query: 554 IKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIP 613
IKSQ +S Y+AQ RGGRGK A K++D++ + +AN+HD ILCFS G++YWLKV+Q+P
Sbjct: 548 IKSQSLSSYQAQHRGGRGKLAAAVKEQDFVKNILVANSHDTILCFSTQGKVYWLKVYQVP 607
Query: 614 QGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFS 673
QGSR +RG+PIIN+ L E+I+ ILP+ R + +++VFM+T+ G +KK L+ FS
Sbjct: 608 QGSRIARGRPIINLLPLVKDEQISAILPI----RAYDGSHFVFMATAQGAIKKVSLAEFS 663
Query: 674 NPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGM 733
PR G IA+ L+ D L+G +TDG +IML +D+GKA+RF+E VR MGRSARGV G+
Sbjct: 664 QPRTKGKIALALNEGDRLVGVDITDGKKEIMLVTDAGKAIRFHEKEVREMGRSARGVRGI 723
Query: 734 RLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKV 793
+L+ KQ VIAL+V K ++LTAT +GYG+RT + +Y RG +G+++I+ N RNGKV
Sbjct: 724 KLKAKQNVIALIVV-KPKGNILTATVHGYGQRTALDDYRSTGRGGQGVMAIRINSRNGKV 782
Query: 794 VAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
V+A V +++LI+ G L+RTRV+EI +MGR+TQGV LI + L G++ +
Sbjct: 783 VSAAQVFDDDDVLLISDKGTLVRTRVNEISQMGRNTQGVRLIQLSQDELLVGMEAIS 839
>gi|212218851|ref|YP_002305638.1| DNA gyrase subunit A [Coxiella burnetii CbuK_Q154]
gi|215918987|ref|NP_819556.2| DNA gyrase subunit A [Coxiella burnetii RSA 493]
gi|206583872|gb|AAO90070.2| DNA gyrase subunit A [Coxiella burnetii RSA 493]
gi|212013113|gb|ACJ20493.1| DNA gyrase subunit A [Coxiella burnetii CbuK_Q154]
Length = 850
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/837 (53%), Positives = 602/837 (71%), Gaps = 17/837 (2%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN+P K AR+VG+ +GK
Sbjct: 19 LKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWNKPNKKSARIVGDVIGK 78
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGDV++YD +VRMAQ FSLR L+DGQGNFGS+DGD+ AAMRYTE RL++ ++ L+
Sbjct: 79 YHPHGDVAVYDTIVRMAQPFSLRYLLIDGQGNFGSVDGDAPAAMRYTEIRLSRFAHALMA 138
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
DLDKET+DF NYD E P+VLPTR+PNLLING+SGIAVGMATNIPPHNL E+I+ L
Sbjct: 139 DLDKETVDFAPNYDETEMAPAVLPTRVPNLLINGASGIAVGMATNIPPHNLNEIINATLA 198
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
++ NP+ ++ +L++ IP PDFPTAGII G + + Y TG+GR+ +RAKT IE + R
Sbjct: 199 LIENPDLNVEELMRHIPGPDFPTAGIINGRNGIVQAYKTGRGRIYVRAKTEIET-TKSGR 257
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
+ I++ ELPYQVNK LLEKI +LV+EK++E IS LRDESDK GMR+VIE+ R + EIV
Sbjct: 258 SLIVVHELPYQVNKARLLEKIGELVREKRIEGISGLRDESDKRGMRMVIEVSRGDNAEIV 317
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LY QTQLQ FG+NM+AL NGQP++LNLK++L F+ HR+EV+ RRT+FELRKARE
Sbjct: 318 LNNLYAQTQLQTVFGINMVALDNGQPRVLNLKQLLSAFLQHRREVVTRRTLFELRKARER 377
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWN---LPDVSKIIGFNKKNYNT 433
AHILEGL +AL NID I +I+ TP AK ++ W + D K G ++ +
Sbjct: 378 AHILEGLGVALANIDEVIALIKKAKTPAIAKENLLAQAWKPGAVADFLKKAGSDRTRPDD 437
Query: 434 ISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDIL 493
++ + K + Y LS QAQ IL + L RLT +E KI +Y +I K+ +L I+
Sbjct: 438 LAAEFGLRK----EGYYLSPAQAQAILDLRLHRLTGLETDKIREEYIAIIDKIEELIAIV 493
Query: 494 SNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGY 553
S+ ++ E+I +EL +K ++G RR+ II + + + EDLI + V+TLS+ GY
Sbjct: 494 SDPDKLHEVIREELIAVKEQFGDE----RRTVIIDDHSDLTHEDLIPEEHRVVTLSHEGY 549
Query: 554 IKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIP 613
IKSQ +S Y+AQ RGGRGK A K++D++ + +AN+HD ILCFS G++YWLKV+Q+P
Sbjct: 550 IKSQSLSSYQAQHRGGRGKLAAAVKEQDFVKNILVANSHDTILCFSTQGKVYWLKVYQVP 609
Query: 614 QGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFS 673
QGSR +RG+PIIN+ L E+I+ ILP+ R + +++VFM+T+ G +KK L+ FS
Sbjct: 610 QGSRIARGRPIINLLPLVKDEQISAILPI----RAYDGSHFVFMATAQGAIKKVSLAEFS 665
Query: 674 NPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGM 733
PR G IA+ L+ D L+G +TDG +IML +D+GKA+RF+E VR MGRSARGV G+
Sbjct: 666 QPRTKGKIALALNEGDRLVGVDITDGKKEIMLVTDAGKAIRFHEKEVREMGRSARGVRGI 725
Query: 734 RLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKV 793
+L+ KQ VIAL+V K ++LTAT +GYG+RT + +Y RG +G+++I+ N RNGKV
Sbjct: 726 KLKAKQNVIALIVV-KPKGNILTATVHGYGQRTALDDYRSTGRGGQGVMAIRINSRNGKV 784
Query: 794 VAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
V+A V +++LI+ G L+RTRV+EI +MGR+TQGV LI + L G++ +
Sbjct: 785 VSAAQVFDDDDVLLISDKGTLVRTRVNEISQMGRNTQGVRLIQLSQDELLVGMEAIS 841
>gi|424629119|ref|ZP_18067416.1| DNA gyrase, A subunit [Vibrio cholerae HC-51A1]
gi|408057515|gb|EKG92361.1| DNA gyrase, A subunit [Vibrio cholerae HC-51A1]
Length = 869
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/855 (52%), Positives = 603/855 (70%), Gaps = 42/855 (4%)
Query: 26 MSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSI 85
MSVIVGRALPDVRDGLKPVHRRVLFAM+ + N WN+ + K ARVVG+ +GKYHPHGD ++
Sbjct: 1 MSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAV 60
Query: 86 YDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDF 145
YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAMRYTE R++KI++ELL DLDKET+D+
Sbjct: 61 YDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRMSKIAHELLADLDKETVDY 120
Query: 146 ISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSI 205
+ NYDG E+ P+VLPT+IPNLLINGSSGIAVGMATNIPPHNL EVIDG L + N +I
Sbjct: 121 VPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMATNIPPHNLGEVIDGCLAYIDNEAITI 180
Query: 206 NDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELP 265
++L+ IP PDFPTA +I G + D Y TG+G+V +R+K IE ++ + II+ E+P
Sbjct: 181 DELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKAEIET-DKNGKETIIVSEIP 239
Query: 266 YQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQ 325
YQVNK L+EKI++LVKEKK+E IS LRDESDK GMRIVIE KR+ + E+VLN LY TQ
Sbjct: 240 YQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIECKRDAVGEVVLNNLYANTQ 299
Query: 326 LQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTI 385
LQ TFG+NM+AL NGQPKL NLKE+L F+ HR+EV+ RRTIFELRKARE AHILEGL +
Sbjct: 300 LQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTIFELRKARERAHILEGLAL 359
Query: 386 ALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII---GFNKKNYNTISKINNISK 442
AL NID I++IR +TP EAK +I W+L +V+ ++ G + + I
Sbjct: 360 ALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERAGTDAARPEWLEPQYGI-- 417
Query: 443 LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEI 502
+ Y L++ QAQ IL + L +LT +E +KI+++Y+ +++++ L IL++++R++E+
Sbjct: 418 --RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAALMHILASTERLMEV 475
Query: 503 ITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGYIKSQPISEY 562
I +EL I+ + + RR+EI + E+LIA +D+V+TLS+ GY+K Q +S+Y
Sbjct: 476 IREELEAIRAGF----SDARRTEITAATHDIDMEELIAREDVVVTLSHEGYVKYQLLSDY 531
Query: 563 RAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGK 622
AQ+RGG+GK A K+ED+I +L +ANTHD IL FS G+ Y +KV+Q+P SR +RGK
Sbjct: 532 EAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQLPLASRTARGK 591
Query: 623 PIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIA 682
PI+N+ L+ E+IT ILP++ +F ++ ++FM+T G VKKT L F+N R +G+IA
Sbjct: 592 PIVNLLPLEENERITAILPVT----EFSEDKFIFMATGDGTVKKTSLDQFANVRANGLIA 647
Query: 683 VNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN------------------------ 718
+NL +ED LIG +TDG +IMLFS GK VRF E+
Sbjct: 648 LNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQPVLDENGQPEIKF 707
Query: 719 -SVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VR MGR+A GV GM+L +V++L+V + VLT TENGYGKRT + EY RG
Sbjct: 708 KGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEG-DVLTVTENGYGKRTSLSEYPTKGRG 766
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
T+G++SIK ++RNG VV A V E M+IT G L+RTRV+E+ ++GR+TQGV LI
Sbjct: 767 TQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRT 826
Query: 838 ENKSKLCGVQRLCKI 852
+ G+QR+ +I
Sbjct: 827 SEGESVVGLQRIDEI 841
>gi|424669341|ref|ZP_18106366.1| DNA gyrase, A subunit [Stenotrophomonas maltophilia Ab55555]
gi|401071412|gb|EJP79923.1| DNA gyrase, A subunit [Stenotrophomonas maltophilia Ab55555]
Length = 906
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/916 (49%), Positives = 634/916 (69%), Gaps = 50/916 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+N N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELNAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVR+AQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+E I+ + ++ NPE ++ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLSESINACIALIDNPEIDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 RIRAKADIEVADN-GRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L F+ HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR AH+LEGLT+AL NID I++I+++ P EA+ +++ W V
Sbjct: 360 VVTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPNEARERMLARVWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L Y+L++IQA +IL+M L RLT +EQ ++ ++Y+
Sbjct: 420 GAMLGAAGAEASRPEDLPKGVGLIEGG-YQLTEIQATQILEMRLHRLTGLEQDRLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
+++ + L IL + R++++I +EL +K ++G ++ IR SE L+ + DLI
Sbjct: 479 QLLEVIAGLIHILEDPDRLLQVIREELVSVKAEFGDERRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+T+S+ GY+K QP+S YRAQ+RGGRG+ A TK+ED+I QL++ NTHD +L F+
Sbjct: 534 APEDVVVTVSHAGYVKRQPVSVYRAQRRGGRGRSAAATKEEDFIEQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V+Q+P+ N+RG+PIIN L+ E++ +LP+ RD+ +VF +T
Sbjct: 594 SSGKVFWLPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPV----RDYADGQFVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT L F+ G IA+NL D L+G LTDG DI+LF+ +GK VRF E+
Sbjct: 650 KNGTVKKTPLGEFAFRLARGKIAINLDEGDALVGVGLTDGQRDILLFASNGKTVRFGEDK 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQK---------------------------- 751
VR+MGR+A GV G+++ ++V++L+V+ +
Sbjct: 710 VRSMGRTATGVRGIKMPAGEEVVSLIVAESAGGIEDENEDDSGVEEAAANGDAVIEGADD 769
Query: 752 ---QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
Q +LTATENGYGKRT + +Y + RGT+G+I I+T +RNGK+VAA L+ E++LI
Sbjct: 770 ASVQYILTATENGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGSSDEVLLI 829
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL-------CKITMIKKYIPV 861
+ GG L+RTR SEI ++GR+TQGV LI + KL V+R+ + P
Sbjct: 830 SDGGTLVRTRGSEISRVGRNTQGVTLIRLSKDEKLQAVERMDASIDEDEDEDEVAAAAPA 889
Query: 862 ITIDGPTASGKGTVAQ 877
T P A+ AQ
Sbjct: 890 TTDGAPAAASSEDAAQ 905
>gi|342903822|ref|ZP_08725626.1| DNA gyrase subunit A [Haemophilus haemolyticus M21621]
gi|341954402|gb|EGT80886.1| DNA gyrase subunit A [Haemophilus haemolyticus M21621]
Length = 880
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/871 (52%), Positives = 610/871 (70%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIEAFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + ++++ +YE ++ K+
Sbjct: 424 LLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVVKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDG+ +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGNNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEG-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|16273182|ref|NP_439419.1| DNA gyrase subunit A [Haemophilus influenzae Rd KW20]
gi|260581180|ref|ZP_05849000.1| DNA gyrase, A subunit [Haemophilus influenzae RdAW]
gi|1170144|sp|P43700.1|GYRA_HAEIN RecName: Full=DNA gyrase subunit A
gi|1574722|gb|AAC22917.1| DNA gyrase, subunit A (gyrA) [Haemophilus influenzae Rd KW20]
gi|260092208|gb|EEW76151.1| DNA gyrase, A subunit [Haemophilus influenzae RdAW]
Length = 880
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/871 (52%), Positives = 609/871 (69%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E N
Sbjct: 194 GCLAYIDKNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVET-N 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIEAFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATSISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 424 LLDASARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEG-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|378697486|ref|YP_005179444.1| DNA gyrase subunit A [Haemophilus influenzae 10810]
gi|301170002|emb|CBW29606.1| DNA gyrase (type II topoisomerase), subunit A [Haemophilus
influenzae 10810]
Length = 880
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/871 (52%), Positives = 610/871 (70%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVET-N 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIEAFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 424 LLDASARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +T+GS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITNGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEG-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|408821526|ref|ZP_11206416.1| DNA gyrase subunit A [Pseudomonas geniculata N1]
Length = 904
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/914 (49%), Positives = 634/914 (69%), Gaps = 48/914 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+N N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELNAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVR+AQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+E I+ + ++ NPE ++ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLSESINACIALIDNPEIDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 RIRAKADIEVADN-GRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L F+ HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR AH+LEGLT+AL NID I++I+++ P EA+ +++ W V
Sbjct: 360 VVTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPNEARERMLARVWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L Y+L++IQA +IL+M L RLT +EQ ++ ++Y+
Sbjct: 420 GAMLGAAGAEASRPEDLPKGVGLIEGG-YQLTEIQATQILEMRLHRLTGLEQDRLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
+++ + L IL + R++++I +EL +K ++G ++ IR SE L+ + DLI
Sbjct: 479 QLLEVIAGLIHILEDPDRLLQVIREELVSVKAEFGDERRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+T+S+ GY+K QP+S YRAQ+RGGRG+ A TK+ED+I QL++ NTHD +L F+
Sbjct: 534 APEDVVVTVSHAGYVKRQPVSVYRAQRRGGRGRSAAATKEEDFIEQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V+Q+P+ N+RG+PIIN L+ E++ +LP+ R++ +VF +T
Sbjct: 594 SSGKVFWLPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPV----REYADGQFVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT L F+ G IA+NL D L+G LTDG DI+LF+ +GK VRF E+
Sbjct: 650 KNGTVKKTPLGEFAFRLARGKIAINLDEGDALVGVGLTDGERDILLFASNGKTVRFGEDK 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQK---------------------------- 751
VR+MGR+A GV G+++ ++V++L+V+ +
Sbjct: 710 VRSMGRTATGVRGIKMPAGEEVVSLIVAESAGGIEDENEDDNGVEEAAANGDAVIDGADD 769
Query: 752 ---QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
Q +LTATENGYGKRT + +Y + RGT+G+I I+T +RNGK+VAA L+ E++LI
Sbjct: 770 ASVQYILTATENGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGSSDEVLLI 829
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI-----TMIKKYIPVIT 863
+ GG L+RTR SEI ++GR+TQGV LI + KL V+R+ + P T
Sbjct: 830 SDGGTLVRTRGSEISRVGRNTQGVTLIRLSKDEKLQAVERMDASIEEDEDEVAAAAPATT 889
Query: 864 IDGPTASGKGTVAQ 877
P A+ AQ
Sbjct: 890 DGAPAAASSEDAAQ 903
>gi|145630895|ref|ZP_01786672.1| DNA gyrase subunit A [Haemophilus influenzae R3021]
gi|144983555|gb|EDJ91023.1| DNA gyrase subunit A [Haemophilus influenzae R3021]
Length = 880
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/872 (51%), Positives = 611/872 (70%), Gaps = 54/872 (6%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVET-N 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNL-PDVSKIIGFNKKNY 431
ARE HILEGL +A +NID I IIR++ +EA I +W L D+ ++ + +
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATSISSRSWTLHSDIINLLDLSARP- 431
Query: 432 NTISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKV 486
+L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 432 ---------DELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKI 482
Query: 487 IDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVI 546
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+
Sbjct: 483 ADLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVV 538
Query: 547 TLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYW 606
TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYW
Sbjct: 539 TLSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYW 598
Query: 607 LKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKK 666
LKV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 599 LKVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKK 654
Query: 667 TLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRS 726
L+ FS PR +GIIA+NL +ED LIG +T+GS +IMLFS G+ VRF EN+VRAMGR
Sbjct: 655 IALTEFSRPRSNGIIALNLRDEDELIGVDITNGSNEIMLFSSQGRVVRFAENAVRAMGRL 714
Query: 727 ARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTAT 758
A GV G++L KV++L+V + + +LTAT
Sbjct: 715 ATGVRGIKLALTNDISDDESAVEIEDISDDNAEALLDLNIDKVVSLVVPKGEGE-ILTAT 773
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTR
Sbjct: 774 QNGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTR 833
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
VSE+ +GR+TQGV LI + + ++R+C
Sbjct: 834 VSEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|209364105|ref|YP_001424883.2| DNA gyrase subunit A [Coxiella burnetii Dugway 5J108-111]
gi|207082038|gb|ABS77442.2| DNA gyrase subunit A [Coxiella burnetii Dugway 5J108-111]
Length = 850
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/837 (53%), Positives = 601/837 (71%), Gaps = 17/837 (2%)
Query: 17 MCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGK 76
+ +SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+ N WN+P K AR+VG+ +GK
Sbjct: 19 LKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWNKPNKKSARIVGDVIGK 78
Query: 77 YHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISNELLI 136
YHPHGDV++YD +VRMAQ FSLR L+DGQGNFGS+DGD+ AAMRYTE RL++ ++ L+
Sbjct: 79 YHPHGDVAVYDTIVRMAQPFSLRYLLIDGQGNFGSVDGDAPAAMRYTEIRLSRFAHALMA 138
Query: 137 DLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLY 196
DLDKET+DF NYD E P+VLPTR+PNLLING+SGIAVGMATNIPPHNL E+I+ L
Sbjct: 139 DLDKETVDFAPNYDETEMAPAVLPTRVPNLLINGASGIAVGMATNIPPHNLNEIINATLA 198
Query: 197 VLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENR 256
++ NP+ ++ +L++ IP PDFPTAGII G + + Y TG+GR+ +RAKT IE + R
Sbjct: 199 LIENPDLNVEELMRHIPGPDFPTAGIINGRNGIVQAYKTGRGRIYVRAKTEIET-TKSGR 257
Query: 257 TAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIV 316
+ I+ ELPYQVNK LLEKI +LV+EK++E IS LRDESDK GMR+VIE+ R + EIV
Sbjct: 258 SLIVAHELPYQVNKARLLEKIGELVREKRIEGISGLRDESDKRGMRMVIEVSRGDNAEIV 317
Query: 317 LNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREY 376
LN LY QTQLQ FG+NM+AL NGQP++LNLK++L F+ HR+EV+ RRT+FELRKARE
Sbjct: 318 LNNLYAQTQLQTVFGINMVALDNGQPRVLNLKQLLSAFLQHRREVVTRRTLFELRKARER 377
Query: 377 AHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWN---LPDVSKIIGFNKKNYNT 433
AHILEGL +AL NID I +I+ TP AK ++ W + D K G ++ +
Sbjct: 378 AHILEGLGVALANIDEVIALIKKAKTPAIAKENLLAQAWKPGAVADFLKKAGSDRTRPDD 437
Query: 434 ISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDIL 493
++ + K + Y LS QAQ IL + L RLT +E KI +Y +I K+ +L I+
Sbjct: 438 LAAEFGLRK----EGYYLSPAQAQAILDLRLHRLTGLETDKIREEYIAIIDKIEELIAIV 493
Query: 494 SNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLGY 553
S+ ++ E+I +EL +K ++G RR+ II + + + EDLI + V+TLS+ GY
Sbjct: 494 SDPDKLHEVIREELIAVKEQFGDE----RRTVIIDDHSDLTHEDLIPEEHRVVTLSHEGY 549
Query: 554 IKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIP 613
IKSQ +S Y+AQ RGGRGK A K++D++ + +AN+HD ILCFS G++YWLKV+Q+P
Sbjct: 550 IKSQSLSSYQAQHRGGRGKLAAAVKEQDFVKNILVANSHDTILCFSTQGKVYWLKVYQVP 609
Query: 614 QGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFS 673
QGSR +RG+PIIN+ L E+I+ ILP+ R + +++VFM+T+ G +KK L+ FS
Sbjct: 610 QGSRIARGRPIINLLPLVKDEQISAILPI----RAYDGSHFVFMATAQGAIKKVSLAEFS 665
Query: 674 NPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGM 733
PR G IA+ L+ D L+G +TDG +IML +D+GKA+RF+E VR MGRSARGV G+
Sbjct: 666 QPRTKGKIALALNEGDRLVGVDITDGKKEIMLVTDAGKAIRFHEKEVREMGRSARGVRGI 725
Query: 734 RLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKV 793
+L+ KQ VIAL+V K ++LTAT +GYG+RT + +Y RG +G+++I+ N RNGKV
Sbjct: 726 KLKAKQNVIALIVV-KPKGNILTATVHGYGQRTALDDYRSTGRGGQGVMAIRINSRNGKV 784
Query: 794 VAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
V+A V +++LI+ G L+RTRV+EI +MGR+TQGV LI + L G++ +
Sbjct: 785 VSAAQVFDDDDVLLISDKGTLVRTRVNEISQMGRNTQGVRLIQLSQDELLVGMEAIS 841
>gi|329123315|ref|ZP_08251881.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Haemophilus
aegyptius ATCC 11116]
gi|327471411|gb|EGF16861.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Haemophilus
aegyptius ATCC 11116]
Length = 880
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/875 (52%), Positives = 612/875 (69%), Gaps = 60/875 (6%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVET-N 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L +N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTL-------------HN 419
Query: 433 TISKINNIS----KLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVI 483
I + ++S +L+ N + Y LS Q IL++ L RLT + +++I +YE ++
Sbjct: 420 DIINLLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELL 479
Query: 484 KKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQD 543
K+ DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D
Sbjct: 480 VKIADLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQED 535
Query: 544 MVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGR 603
+V+TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GR
Sbjct: 536 VVVTLSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGR 595
Query: 604 LYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGI 663
LYWLKV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GI
Sbjct: 596 LYWLKVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGI 651
Query: 664 VKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAM 723
VKK L+ FS PR +GIIA+NL +ED LIG +T+GS +IMLFS G+ VRF EN+VRAM
Sbjct: 652 VKKIALTEFSRPRSNGIIALNLRDEDELIGVDITNGSNEIMLFSSQGRVVRFAENAVRAM 711
Query: 724 GRSARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVL 755
GR A GV G++L KV++L+V + ++L
Sbjct: 712 GRLATGVRGIKLALTNDISDDESAVEIEEISDDNAEASLDLNIDKVVSLVVPKGEG-AIL 770
Query: 756 TATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILI 815
TAT+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+
Sbjct: 771 TATQNGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLV 830
Query: 816 RTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
RTRVSE+ +GR+TQGV LI + + ++R+C
Sbjct: 831 RTRVSEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|260582929|ref|ZP_05850713.1| DNA gyrase, A subunit [Haemophilus influenzae NT127]
gi|260094029|gb|EEW77933.1| DNA gyrase, A subunit [Haemophilus influenzae NT127]
Length = 880
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/872 (51%), Positives = 610/872 (69%), Gaps = 54/872 (6%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVET-N 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNL-PDVSKIIGFNKKNY 431
ARE HILEGL +A +NID I IIR++ +EA I +W L D+ ++ + +
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATSISSRSWTLHSDIINLLDLSARP- 431
Query: 432 NTISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKV 486
+L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 432 ---------DELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKI 482
Query: 487 IDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVI 546
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+
Sbjct: 483 ADLLHILSSAERLMEVIREELEDVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVV 538
Query: 547 TLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYW 606
TLS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYW
Sbjct: 539 TLSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYW 598
Query: 607 LKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKK 666
LKV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 599 LKVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKK 654
Query: 667 TLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRS 726
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR
Sbjct: 655 IALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRL 714
Query: 727 ARGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTAT 758
A GV G++L KV++L+V + ++LT T
Sbjct: 715 ATGVRGIKLALTNDISDDESAVEIEEISDDNAEASLDLNIDKVVSLVVPKGEG-AILTVT 773
Query: 759 ENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818
+NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTR
Sbjct: 774 QNGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTR 833
Query: 819 VSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
VSE+ +GR+TQGV LI + + ++R+C
Sbjct: 834 VSEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|379009562|ref|YP_005267375.1| DNA gyrase subunit A [Wigglesworthia glossinidia endosymbiont of
Glossina morsitans morsitans (Yale colony)]
gi|375158086|gb|AFA41152.1| DNA gyrase (type II topoisomerase), subunit A [Wigglesworthia
glossinidia endosymbiont of Glossina morsitans morsitans
(Yale colony)]
Length = 853
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/855 (52%), Positives = 618/855 (72%), Gaps = 17/855 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MN K+++ I +EEE+ +SYLDYAMSVI+GRALPDVRDGLKPVHRR+LFAM +NN WN
Sbjct: 1 MNDNNKKILKINIEEELKRSYLDYAMSVIIGRALPDVRDGLKPVHRRILFAMKTINNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG +GKYHPHGD ++YD +VRMAQ FSLR TL+DGQGNFGSIDGD+AAAM
Sbjct: 61 KPYKKSARIVGNVIGKYHPHGDTAVYDTIVRMAQKFSLRYTLIDGQGNFGSIDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE +L+KI++E+L DL+K+T+++I+NYD E P ++PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIKLSKIAHEILTDLEKDTVNYIANYDDTEYMPEIMPTKIPNLLLNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHN+ EVI+ L L N S+ DL+K +P PDFPT G+IYG + D Y +G+G++
Sbjct: 181 NIPPHNIGEVINACLAYLENKHISVLDLMKHLPGPDFPTYGVIYGSEGIQDAYTSGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA I NR + +III E+PYQVNK L+EKI+ LVKEK++E IS LRDESD+ G
Sbjct: 241 YIRASAKILADNRTGKESIIIYEIPYQVNKIRLIEKIADLVKEKRIEGISALRDESDREG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR+ + EIVLN LY T LQ +FG+NM+AL +GQPK+L+LK+IL F+ HR+
Sbjct: 301 MRIVVEIKRDTVGEIVLNNLYSLTPLQVSFGINMVALHHGQPKVLSLKKILSAFLKHRRI 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
+I RRT FEL+K + HILE IAL N++ I +++ +++ +EA+ ++ TWNL +
Sbjct: 361 IITRRTNFELKKINDRMHILESFFIALLNVNTVINLVKKSTSLEEAQKRLTSYTWNLTNF 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDM----YKLSDIQAQEILKMPLQRLTNMEQKKII 476
S+++ N+ IS KL + + Y ++ QAQ IL + L +L +EQKK+I
Sbjct: 421 SEVLMKNQ----LISHFKKNKKLHDTFLKSTHYYMTKNQAQAILDLRLHKLVKLEQKKLI 476
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
+Y+N+ +K L IL K++++ I EL ++K +Y K+ RR++II +N + E
Sbjct: 477 TEYKNLTQKSYYLKQILKYPKKLLDEIRRELVLLKEEY----KDPRRTKIIQEPVNINIE 532
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
DLI +D+V+TLS+ GY+K QP+ +Y AQ RGG+GK A K++D+I + +ANTHD IL
Sbjct: 533 DLINKKDVVVTLSHQGYVKYQPLKDYEAQHRGGKGKSATSIKEKDFIERFLVANTHDSIL 592
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
FS+ GR+YW+K++Q+P+ +R S GKPIIN+ L+ KE IT ILP+ ++ K YVF
Sbjct: 593 LFSSRGRVYWMKIFQLPETNRGSSGKPIINLLPLEPKEYITAILPVHKHE----KEKYVF 648
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
M+T+ GIVKKT LS FS PR SGIIAVNL+ D LIG LTDGS ++MLFS+ GK VRF+
Sbjct: 649 MATASGIVKKTSLSEFSRPRNSGIIAVNLNAGDKLIGVDLTDGSQEVMLFSEYGKVVRFS 708
Query: 717 ENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNR 776
E+ VR MGR+A GV G+ L +V++L++ +LT T+ GYGKRT EY K +R
Sbjct: 709 ESQVRNMGRTASGVKGISLLPGDRVVSLIIPKGN-SPILTVTQYGYGKRTNQSEYPKKSR 767
Query: 777 GTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILIT 836
+G+ISIK +KRNGKVV A VN Y +IM+IT G L+RTRVSE+ +GR+T GV LI
Sbjct: 768 AIQGVISIKVSKRNGKVVGAVQVNDYDQIMIITDSGTLVRTRVSEVNIVGRNTHGVRLIR 827
Query: 837 VENKSKLCGVQRLCK 851
+ ++ + G+QR+ +
Sbjct: 828 ISKENNVVGLQRVVE 842
>gi|119505049|ref|ZP_01627125.1| DNA gyrase subunit A [marine gamma proteobacterium HTCC2080]
gi|119459031|gb|EAW40130.1| DNA gyrase subunit A [marine gamma proteobacterium HTCC2080]
Length = 876
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/861 (50%), Positives = 610/861 (70%), Gaps = 19/861 (2%)
Query: 3 QFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRP 62
+ A+EV+ + +E+E+ +SY++YAMSVIVGRALPDVRDGLKPVHRRVLFAM+E+NN WN+
Sbjct: 7 EIAREVLPVNIEDELKQSYMEYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWNKA 66
Query: 63 FVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRY 122
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FSLR TLVDGQGNFGSIDGDSAAAMRY
Sbjct: 67 YKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYTLVDGQGNFGSIDGDSAAAMRY 126
Query: 123 TECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNI 182
TE R++K+++ LL DLDKET+DF+ NYDG E+ P VLPTR PNLLINGSSGIAVGMATNI
Sbjct: 127 TEIRMSKLAHALLADLDKETVDFVDNYDGSEQIPVVLPTRAPNLLINGSSGIAVGMATNI 186
Query: 183 PPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVII 242
PPHNL EV+ G L + NPE ++ L++ IP PDFPT II G + + Y TG+GR+ +
Sbjct: 187 PPHNLREVVAGCLAFIDNPEIDVDGLMEYIPGPDFPTGAIINGRAGIVQAYRTGRGRIYV 246
Query: 243 RAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMR 302
RA+ + + III E+PYQ+NK L+E+I++LVKEKKLE I+ LRDESDK G+R
Sbjct: 247 RARAEVITDESRGKDTIIIHEIPYQLNKARLIERIAELVKEKKLEGITELRDESDKDGLR 306
Query: 303 IVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVI 362
+VIEL+R E+ ++VLN LY QTQLQ+ G+NM+ALV+GQP+ LNL E++ F+ HR+EV+
Sbjct: 307 VVIELRRGEMGDVVLNNLYAQTQLQSVVGINMVALVDGQPRTLNLLEMIEAFVRHRREVV 366
Query: 363 KRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSK 422
RRT++ LRKARE H+LEGL IAL NID I++I+++ TP +AK ++ W +V+
Sbjct: 367 TRRTVYLLRKARERGHVLEGLAIALVNIDEIIELIKTSPTPADAKAGLVAKPWQSGEVT- 425
Query: 423 IIGFNKKNYNTISKINNISK---LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKY 479
G ++ + +++ K L ++ Y LS QAQ IL++ L RLT +E +K++ +Y
Sbjct: 426 --GMLERAGEDACRPDDLPKEFGLHGSE-YFLSPAQAQAILELRLHRLTGLEHEKLLQEY 482
Query: 480 ENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLI 539
+ + ++ +IL + R+ ++I DEL + ++G R +EI + + S EDLI
Sbjct: 483 SDKLVEIAGYLEILQDPDRLRQVIRDELKELVEEFGDD----RLTEITDSTHDLSVEDLI 538
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
+D V+T+S+ GY K+Q +S+Y+AQ+RGG G+ A KDED++ L IA+TH ILCFS
Sbjct: 539 TEEDRVVTISHGGYAKTQSLSDYQAQRRGGTGRSATAVKDEDFVEHLLIASTHATILCFS 598
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G++YWLKV+ IP SRN+RG+P++N+ L E+IT ILP+ + + +++FM+T
Sbjct: 599 DLGKVYWLKVFHIPLASRNARGRPMVNLLPLDEGERITSILPVEG----YEEGHFIFMAT 654
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
+ GIVKKT + F+ R G+ A+ L +D+L+G A+TDGS D+ML S GKAVRF E +
Sbjct: 655 ARGIVKKTDMQQFARQRSVGLRALELEADDWLVGTAVTDGSCDVMLLSSEGKAVRFQEQA 714
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
VRAMGR+ARGV G++L + ++I+L+V ++LT +E GYGKRT +E+ RGTK
Sbjct: 715 VRAMGRTARGVRGIKLGDEHRLISLIVP-QADSTILTVSEKGYGKRTDTEEFPCKGRGTK 773
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I++ T +NG +V A V+ EIMLI+ G +RTRV EI +GR+TQGV +I
Sbjct: 774 GVIAMATTAKNGPLVGAVQVSTGDEIMLISDQGTAVRTRVEEISTLGRNTQGVRVIKTRE 833
Query: 840 KSKLCGVQRLCKITMIKKYIP 860
KL RL +I +P
Sbjct: 834 DEKLV---RLSRIVEDDDAVP 851
>gi|419839915|ref|ZP_14363315.1| DNA gyrase, A subunit [Haemophilus haemolyticus HK386]
gi|386908653|gb|EIJ73340.1| DNA gyrase, A subunit [Haemophilus haemolyticus HK386]
Length = 880
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/871 (52%), Positives = 609/871 (69%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVET-N 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAAIAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ L+ N + Y LS Q IL++ L RLT + ++++ +YE ++ K+
Sbjct: 424 LLDVSARPDDLEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVVKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDITDDNAEASLDLNIDKVVSLVVPKGEG-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|386719092|ref|YP_006185418.1| DNA gyrase subunit A [Stenotrophomonas maltophilia D457]
gi|384078654|emb|CCH13247.1| DNA gyrase subunit A [Stenotrophomonas maltophilia D457]
Length = 908
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/881 (50%), Positives = 627/881 (71%), Gaps = 43/881 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM+E+N N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMNELNAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVR+AQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+E I+ + ++ NP+ ++ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLSESINACIALIDNPDIDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 RIRAKADIEVADN-GRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L F+ HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR AH+LEGLT+AL NID I++I+++ P EA+ +++ W V
Sbjct: 360 VVTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPNEARERMLARVWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L Y+L++IQA +IL+M L RLT +EQ ++ ++Y+
Sbjct: 420 GAMLGAAGAEASRPEDLPKGVGLIEGG-YQLTEIQATQILEMRLHRLTGLEQDRLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
+++ + L IL + R++++I +EL +K ++G ++ IR SE L+ + DLI
Sbjct: 479 QLLEVIAGLIHILEDPDRLLQVIREELVNVKAEFGDERRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+T+S+ GY+K QP+S YRAQ+RGGRG+ A TK+ED+I QL++ NTHD +L F+
Sbjct: 534 APEDVVVTVSHAGYVKRQPVSVYRAQRRGGRGRSAAATKEEDFIEQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V+Q+P+ N+RG+PIIN L+ E++ +LP+ R++ +VF +T
Sbjct: 594 SSGKVFWLPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPV----REYADGQFVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT LS F+ G IA+NL D L+G LTDG DI+LF+ +GK VRF E+
Sbjct: 650 KNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVGLTDGQRDILLFASNGKTVRFGEDK 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQK---------------------------- 751
VR+MGR+A GV G+++ ++V++L+V+ +
Sbjct: 710 VRSMGRTATGVRGIKMPAGEEVVSLIVAESAGGSEDENEDDSGVEEAAANGDAVIDGADD 769
Query: 752 ---QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
Q +LTATENGYGKRT + +Y + RGT+G+I I+T +RNGK+VAA L+ E++LI
Sbjct: 770 ASVQYILTATENGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGSSDEVLLI 829
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
+ GG L+RTR SEI ++GR+TQGV LI + KL V+R+
Sbjct: 830 SDGGTLVRTRGSEISRVGRNTQGVTLIRLSKDEKLQAVERM 870
>gi|194366351|ref|YP_002028961.1| DNA gyrase subunit A [Stenotrophomonas maltophilia R551-3]
gi|194349155|gb|ACF52278.1| DNA gyrase, A subunit [Stenotrophomonas maltophilia R551-3]
Length = 904
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/883 (50%), Positives = 628/883 (71%), Gaps = 47/883 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+N N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELNAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVR+AQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ NPE ++ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLTESINACIALIDNPEIDVDGLMEYIPGPDFPTAGIINGTAGIIAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 RIRAKADIEVADN-GRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L F+ HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR AH+LEGLT+AL NID I++I+++ P EA+ +++ W V
Sbjct: 360 VVTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPAEARERMLARLWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
++G S+ +++ K Y+L++IQA +IL+M L RLT +EQ ++ +
Sbjct: 420 GSMLGAAGAE---ASRPDDLPKGVGLIEGGYQLTEIQATQILEMRLHRLTGLEQDRLTEE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTED 537
Y+ +++ + L IL + R++++I +EL +K ++G ++ IR SE L+ + D
Sbjct: 477 YKQLLEVIAGLIHILEDPDRLLQVIREELISVKAEFGDERRTEIRHSEEDLDIL-----D 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+T+S+ GY+K QP+S YRAQ+RGGRG+ A TK+ED+I QL++ NTHD +L
Sbjct: 532 LIAPEDVVVTVSHAGYVKRQPVSVYRAQRRGGRGRSAASTKEEDFIEQLWLVNTHDTLLT 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F++ G+++WL V+Q+P+ N+RG+PIIN L+ E++ +LP+ R++ +VF
Sbjct: 592 FTSSGKVFWLPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPV----REYADGQFVFF 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G VKKT L F+ G IA+NL D L+G LTDG DI+LF+ +GK VRF E
Sbjct: 648 ATKNGTVKKTPLGEFAFRLARGKIAINLDEGDALVGVGLTDGERDILLFASNGKTVRFGE 707
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQK-------------------------- 751
+ VR+MGR+A GV G+++ ++V++L+V+ +
Sbjct: 708 DKVRSMGRTATGVRGIKMPAGEEVVSLIVAESAGGSEDENEDDNGVEETAANGDAVIDGA 767
Query: 752 -----QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIM 806
Q +LTATENGYGKRT + +Y + RGT+G+I I+T +RNGK+VAA L+ E++
Sbjct: 768 DDASVQYILTATENGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGSGDEVL 827
Query: 807 LITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
LI+ GG L+RTR SEI ++GR+TQGV LI + KL V+R+
Sbjct: 828 LISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKDEKLQAVERM 870
>gi|384228192|ref|YP_005619927.1| DNA gyrase subunit A [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539125|gb|AEO07992.1| DNA gyrase subunit A [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 836
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/851 (54%), Positives = 619/851 (72%), Gaps = 17/851 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M AK++I + +EEE+ +SYLDY+MSVI+GRALPDVRDGLKPVHRR+LFAM+ +NN WN
Sbjct: 1 MKDAAKDIIHVNIEEELKRSYLDYSMSVIIGRALPDVRDGLKPVHRRILFAMYVLNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YDA+VRMAQ+FSLR L+DGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDAIVRMAQNFSLRYMLIDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K T++F+SNYDG EK P +LP +IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLNDLEKNTVEFLSNYDGTEKIPEILPAKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + N ++ +LIK IP PDFPTAGII G S + + Y TGKG++
Sbjct: 181 NIPPHNLHEVINGCLAYIDNQNITLPELIKHIPGPDFPTAGIINGTSGIEEAYRTGKGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE+ + + +II DE+PYQVNK L+EKI++LVK+K+++ I+ LRDESDK G
Sbjct: 241 YIRARNKIEKNKKNKKESIIFDEIPYQVNKSRLIEKIAELVKDKRIDGITALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR I EI+LN+LY T LQ +FG+NM+AL +GQPK+L+LKEIL F+ HR+E
Sbjct: 301 MRIVVEVKRETISEIILNQLYALTPLQISFGINMVALCHGQPKVLSLKEILKNFLSHRQE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
+I RR+IFEL K HILEG A NI+ I++I+ + +AKN II+ W D+
Sbjct: 361 IIIRRSIFELNKISNRIHILEGFNTAFININLIIELIKLSGNSTDAKNAIIQKQWMSEDI 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
K YN N I +N Y S IQAQ IL + L +LTN+EQKKI+ +Y
Sbjct: 421 KK--------YNFTQSKNIILPQSDNKKYFFSKIQAQAILDLRLHKLTNLEQKKILLEYN 472
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ K+ +L +IL N ++ +I EL I+N + RR++I N N + EDLI
Sbjct: 473 DLKKRQQELKEILDNPNCMLNVIKSELLSIQNNFSDK----RRTKITNNHPNINIEDLIT 528
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K++D+I L IANTHD ILCFS+
Sbjct: 529 QEDVVVTLSHSGYVKYQPLSDYNAQRRGGKGKSAAKIKEKDFIESLVIANTHDTILCFSS 588
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G LYW+KV+Q+P+ SR+++GKPI+N+ L E+IT ILP++ ++ N +FM+T+
Sbjct: 589 KGILYWMKVYQLPESSRHAKGKPIVNLLPLSTNERITAILPVN----EYQDNLNIFMTTA 644
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK+ L F PR SGIIA+NL D LIG ALT+G+ IMLF+ +GK V+F ENSV
Sbjct: 645 YGIVKKSSLKQFKKPRFSGIIAINLHEHDELIGVALTNGNNHIMLFTQNGKVVQFLENSV 704
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G++++K KV++L+V N+ S+L ATENGYGKRT I ++ +R T+G
Sbjct: 705 RTMGRTASGVKGIKIKKNDKVVSLIVPKNEG-SILIATENGYGKRTKIIDFPIKSRATQG 763
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK K+NGK++ A V +IM+IT G L+R RVSEI +GR+TQGVILI K
Sbjct: 764 VISIKITKKNGKIIGAIQVFEKDQIMMITNAGTLVRIRVSEIGILGRNTQGVILIRTSKK 823
Query: 841 SKLCGVQRLCK 851
++ +QR+ +
Sbjct: 824 EQVVALQRIIE 834
>gi|253698661|ref|YP_003019850.1| DNA gyrase subunit alpha [Geobacter sp. M21]
gi|251773511|gb|ACT16092.1| DNA gyrase, A subunit [Geobacter sp. M21]
Length = 836
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/853 (51%), Positives = 602/853 (70%), Gaps = 47/853 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
+NQ K +S+ +E+EM +SY+DYAMSVIVGRALPDVRDGLKPVHRR LFAM++M+N WN
Sbjct: 2 LNQLNK--VSVNIEDEMKRSYMDYAMSVIVGRALPDVRDGLKPVHRRCLFAMYDMSNDWN 59
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGDS AAM
Sbjct: 60 KPYKKSARVVGDVIGKYHPHGDTAVYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDSPAAM 119
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ELL DL+KET+ + NYD KEP VLP++ PNLL+NGS+GIAVGMAT
Sbjct: 120 RYTEIRMEQLAHELLADLEKETVPYGPNYDDSLKEPLVLPSKFPNLLVNGSAGIAVGMAT 179
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVIDG++ V+ NP+ + +L+++IP PDFPT G IYG + Y TG+G +
Sbjct: 180 NIPPHNLTEVIDGIVAVIDNPQLTFEELVELIPGPDFPTGGFIYGREGIMKAYSTGRGII 239
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + R +I++ E+PYQVNK L+EKI++LVKEKK+E IS+LRDESD+ G
Sbjct: 240 QMRAKVQIETQKKTERQSIVVTEIPYQVNKARLVEKIAELVKEKKIEGISDLRDESDREG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIELK++E P I+LN LYKQTQ+Q++FG+ MLA+VN +P++L L+E + +FI HRKE
Sbjct: 300 MRIVIELKKDENPTILLNHLYKQTQMQSSFGIIMLAIVNSRPRVLTLRETIDFFIEHRKE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
++ RRTIF+L+KA AHILEGL IAL N+D I +I+++++P EAK ++E
Sbjct: 360 IVTRRTIFDLKKAEARAHILEGLKIALDNLDEVIALIKASASPAEAKAGLMER------- 412
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ LSD+QAQ IL M L RLT +E+ KI+ +
Sbjct: 413 ----------------------------FGLSDLQAQAILDMRLHRLTGLERDKIMEELR 444
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++K + L +IL++ I++II EL +K+K+G RRSEI++ + S ED I
Sbjct: 445 EILKYIARLKEILASEAEILKIIVGELVELKDKFGDK----RRSEIVMQTADISLEDTIV 500
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+T+S+ GYIK ++ YRAQ+RGG+GK M TK+ED++ QLFIA+T DY++ F++
Sbjct: 501 EEDMVVTISHTGYIKRNAVTLYRAQRRGGKGKTGMKTKEEDFVEQLFIASTKDYLMFFTD 560
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV++IP+ R +RGK I+N+ +L EKIT ILP+ ++F + ++ M+T
Sbjct: 561 AGKVYWLKVYEIPEAGRAARGKAIVNLLNLAANEKITTILPV----KEFVDDKFIMMATR 616
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT + +S+PR GIIAVNL D LI ALTDG D++L S +GKA+RF E V
Sbjct: 617 NGVVKKTNMMEYSHPRVGGIIAVNLDEGDKLITVALTDGKQDVLLASANGKAIRFKEEDV 676
Query: 721 RAMGRSARGVIGMRLEKKQKVIAL--LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
R +GR +RGV GM LE + VI + L N ++ T TENGYGKRT I EY +RG
Sbjct: 677 RTVGRVSRGVRGMTLEDEDVVIGMEILNENFTDSTIFTVTENGYGKRTEISEYRSQSRGG 736
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG+I+IKT +RNG VV VN +++MLIT G ++R V+ +GR+TQGV L+ E
Sbjct: 737 KGVITIKTTERNGNVVDIKQVNDDNDLMLITDQGKILRVPVAGFSIIGRNTQGVRLMVKE 796
Query: 839 NKSKLCGVQRLCK 851
++ V RL +
Sbjct: 797 ENERVVAVARLAE 809
>gi|197116407|ref|YP_002136834.1| DNA gyrase subunit A [Geobacter bemidjiensis Bem]
gi|197085767|gb|ACH37038.1| DNA gyrase, A subunit [Geobacter bemidjiensis Bem]
Length = 836
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/853 (51%), Positives = 603/853 (70%), Gaps = 47/853 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
+NQ K +S+ +E+EM +SY+DYAMSVIVGRALPDVRDGLKPVHRR LFAM++M+N WN
Sbjct: 2 LNQLNK--VSVNIEDEMKRSYMDYAMSVIVGRALPDVRDGLKPVHRRCLFAMYDMSNDWN 59
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGDS AAM
Sbjct: 60 KPYKKSARVVGDVIGKYHPHGDTAVYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDSPAAM 119
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ELL D+DKET+ + NYD KEP VLP++ PNLL+NGS+GIAVGMAT
Sbjct: 120 RYTEIRMEQLAHELLADIDKETVPYGPNYDDSLKEPLVLPSKFPNLLVNGSAGIAVGMAT 179
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG++ ++ NP+ + +L+++IP PDFPT G IYG + Y TG+G +
Sbjct: 180 NIPPHNLSEVIDGIVAIIDNPQLTFEELVELIPGPDFPTGGFIYGREGIMKAYSTGRGII 239
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + R +I++ E+PYQVNK L+EKI++LVKEKK+E IS+LRDESD+ G
Sbjct: 240 QMRAKVQIETQKKTERQSIVVTEIPYQVNKARLVEKIAELVKEKKIEGISDLRDESDREG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELK++E P I+LN LYKQTQ+Q++FG+ MLA+VN +P++L L+E + +FI HRKE
Sbjct: 300 MRVVIELKKDENPTIILNHLYKQTQMQSSFGIIMLAIVNSRPRVLTLRETIDFFIEHRKE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
++ RRTIF+L+KA AHILEGL IAL N+D I +I+++++P EAK ++E
Sbjct: 360 IVTRRTIFDLKKAEARAHILEGLKIALDNLDEVIALIKASASPAEAKAGLMER------- 412
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ LSD+QAQ IL M L RLT +E++KI+ +
Sbjct: 413 ----------------------------FGLSDLQAQAILDMRLHRLTGLEREKIMEELR 444
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++K + L +IL++ I++II EL +K+K+G RRSEI++ + S ED I
Sbjct: 445 EILKYIARLKEILASEAEILKIIVGELVELKDKFGDK----RRSEIVMQTADISLEDTIV 500
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+T+S+ GYIK ++ YRAQ+RGG+GK M TK+ED++ QLFIA+T DY++ F++
Sbjct: 501 EEDMVVTISHTGYIKRNAVTLYRAQRRGGKGKTGMKTKEEDFVEQLFIASTKDYLMFFTD 560
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV++IP+ R +RGK I+N+ +L EKIT ILP+ ++F + ++ M+T
Sbjct: 561 AGKVYWLKVYEIPEAGRAARGKAIVNLLNLAANEKITTILPV----KEFVDDKFIMMATR 616
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT + +S+PR GIIAVNL D LI ALTDG D++L S +GKA+RF E V
Sbjct: 617 NGVVKKTNMMEYSHPRVGGIIAVNLDEGDKLITVALTDGKQDVLLASANGKAIRFKEEDV 676
Query: 721 RAMGRSARGVIGMRLEKKQKVIAL--LVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGT 778
R +GR +RGV GM LE + VI + L N ++ T TENGYGKRT I EY +RG
Sbjct: 677 RTVGRVSRGVRGMTLEGEDVVIGMEILNENFTDSTIFTVTENGYGKRTEISEYRSQSRGG 736
Query: 779 KGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVE 838
KG+I+IKT +RNG VV VN +++MLIT G ++R V+ +GR+TQGV L+ E
Sbjct: 737 KGVITIKTTERNGNVVDIKQVNDDNDLMLITDQGKILRVPVAGFSIIGRNTQGVRLMVKE 796
Query: 839 NKSKLCGVQRLCK 851
++ V RL +
Sbjct: 797 ENERVVAVARLAE 809
>gi|419802251|ref|ZP_14327447.1| DNA gyrase, A subunit [Haemophilus parainfluenzae HK262]
gi|419845049|ref|ZP_14368336.1| DNA gyrase, A subunit [Haemophilus parainfluenzae HK2019]
gi|385191013|gb|EIF38440.1| DNA gyrase, A subunit [Haemophilus parainfluenzae HK262]
gi|386416975|gb|EIJ31467.1| DNA gyrase, A subunit [Haemophilus parainfluenzae HK2019]
Length = 881
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/868 (51%), Positives = 608/868 (70%), Gaps = 42/868 (4%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + ++ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQSGITASKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV+D
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLD 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E +
Sbjct: 194 GCLAYIDNENITIDELMQYIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARASVETTD 253
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ + II+ ELPYQVNK L+EKI++L+K+KK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 254 K-GKEQIIVTELPYQVNKAKLVEKIAELIKDKKIEGISNIIDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLK+I+ F++HR+EV+ RR++FELRK
Sbjct: 313 GEVVLNHLYALTQMQVTFGINMVALDHGQPRLFNLKQIIEAFVMHRREVVIRRSLFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR + +EA K+I W L S+I+G
Sbjct: 373 ARERTHILEGLAVATSNIDEIIDIIRQSKERKEAAEKLISRPWKLN--SEILGLLDAAAR 430
Query: 433 TISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDI 492
+Q +D Y LS Q IL++ L RLT + +++IN+Y+ ++ K+ +L I
Sbjct: 431 PAELAAEFG-IQGSDYY-LSPEQVDAILELRLHRLTGLATEEVINEYKELLVKIAELLHI 488
Query: 493 LSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLG 552
+++ +R++E+I +EL ++ ++ RR+EI + + EDLIA +D+V+TLS+ G
Sbjct: 489 INSPERLMEVIREELEQVRAQFADE----RRTEITAASGDIDLEDLIAQEDVVVTLSHEG 544
Query: 553 YIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQI 612
Y+K QP+++Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS+ GRLYWLKV+Q+
Sbjct: 545 YVKYQPLTDYEAQRRGGKGKSATKMKDEDFIEKLLVANTHDTILCFSSRGRLYWLKVYQL 604
Query: 613 PQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNF 672
PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK L+ F
Sbjct: 605 PQASRGARGRPIVNILPLQENERITAILPISA----YEEDKFVIMATAGGIVKKIALTEF 660
Query: 673 SNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIG 732
S PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF E++VRAMGR A GV G
Sbjct: 661 SRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAESAVRAMGRLATGVRG 720
Query: 733 MRLEKK----------------------------QKVIALLVSNNQKQSVLTATENGYGK 764
++L KV++L+V N ++LTAT+NGYGK
Sbjct: 721 IKLALTNDIADDESAVEIEDVSDDNAEETLDLNIDKVVSLVVPKNDG-AILTATQNGYGK 779
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRVSE+
Sbjct: 780 RTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRVSEVSI 839
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCKI 852
+GR+TQGV LI + ++R+C +
Sbjct: 840 VGRNTQGVRLIRTAEDEHVVSLERVCDV 867
>gi|384227621|ref|YP_005619366.1| DNA gyrase subunit A [Buchnera aphidicola str. Ak (Acyrthosiphon
kondoi)]
gi|345538561|gb|AEO08538.1| DNA gyrase subunit A [Buchnera aphidicola str. Ak (Acyrthosiphon
kondoi)]
Length = 833
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/851 (53%), Positives = 617/851 (72%), Gaps = 20/851 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A +I + +EEE+ SYLDY+MSVIVGRALPDVRDGLKPVHRR+LFAM+ +NN WN
Sbjct: 1 MKDPAPAIIQVNIEEELKSSYLDYSMSVIVGRALPDVRDGLKPVHRRILFAMYILNNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YDA+VRMAQ FSLR L+DGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDAIVRMAQKFSLRYMLIDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI++ELL DL+K T++F+ NYDG E P +LP +IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLNDLEKNTVEFLPNYDGTEHIPEILPAKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVI+G L + N S+ +LIK IP PDFPTAGII G S + + Y TGKG++
Sbjct: 181 NIPPHNLHEVINGCLAYIDNNNISLKELIKYIPGPDFPTAGIINGKSGIEEAYRTGKGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE+ + + +II DE+PYQVNK L+EKI++LVK+K+++ I+ LRDESDK G
Sbjct: 241 YIRARNKIEKNKKNKKESIIFDEIPYQVNKSRLIEKIAELVKDKRIDGITALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR I EI+LN+LY TQLQ +FG+NM+AL GQP+ L LKEIL +F+ HR+E
Sbjct: 301 MRIVIEIKREAISEIILNQLYSLTQLQISFGINMVALCQGQPRTLCLKEILQHFLSHRQE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
+I RR++FEL K + HILEGL AL NI+ I+II+++ +AKN II+ W ++
Sbjct: 361 IIIRRSLFELNKIQSRIHILEGLNTALININTIIKIIKNSGNSTDAKNLIIKKKWMSEEI 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
K + Y L + Y ++ QAQ IL + L +LTN+EQKKII ++
Sbjct: 421 KKRNDLLETKY-----------LSKKNEYHFTEKQAQAILDLRLHKLTNLEQKKIITEHN 469
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++IKK +L +IL N R+ ++I EL I+N + RR+EI N + + EDLI
Sbjct: 470 DLIKKTKELKEILENPNRMFDLIKSELLFIQNNFSDK----RRTEITENHTDINIEDLIN 525
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQ+RGG+GK A K+ED+I L IANTHD ILCFS+
Sbjct: 526 QEDVVVTLSHSGYVKYQPLSDYNAQRRGGKGKSAAKIKEEDFIESLVIANTHDTILCFSS 585
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G LYW+KV+Q+P+ SR++RG+PI+N+ L KE+IT ILP+ ++ N +FMST+
Sbjct: 586 RGILYWMKVYQLPESSRHARGRPIVNLLPLSPKERITAILPV----HEYKDNLNIFMSTA 641
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK+ L F PR +GIIA+NL D LIG ALTDG+ +IMLF+ +GK V+F ENSV
Sbjct: 642 NGIVKKSSLKQFKKPRLAGIIAINLHANDELIGVALTDGNNNIMLFTKNGKVVQFLENSV 701
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMGR+A GV G++++K KV++L+V N + S+L AT+NGYGKRT I ++ +R T+G
Sbjct: 702 RAMGRTASGVRGIKIKKNDKVVSLIVPKN-RGSILIATKNGYGKRTKITDFPIKSRATQG 760
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK K+NGK++ A V +IM+IT G L+R RVSE+ +GR+TQGVILI
Sbjct: 761 VISIKITKKNGKIIGAIQVVEKDQIMMITNAGTLVRIRVSEVGILGRNTQGVILIRTSKN 820
Query: 841 SKLCGVQRLCK 851
++ +Q++ +
Sbjct: 821 EQVVALQKIVE 831
>gi|344207995|ref|YP_004793136.1| DNA gyrase subunit A [Stenotrophomonas maltophilia JV3]
gi|343779357|gb|AEM51910.1| DNA gyrase, A subunit [Stenotrophomonas maltophilia JV3]
Length = 906
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/881 (50%), Positives = 627/881 (71%), Gaps = 43/881 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVL+AM+E+N N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMNELNAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVR+AQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+E I+ + ++ NP+ ++ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLSESINACIALIDNPDIDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 RIRAKADIEVADN-GRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L F+ HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR AH+LEGLT+AL NID I++I+++ P EA+ +++ W V
Sbjct: 360 VVTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPNEARERMLARVWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L Y+L++IQA +IL+M L RLT +EQ ++ ++Y+
Sbjct: 420 GAMLGAAGAEASRPEDLPKGVGLIEGG-YQLTEIQATQILEMRLHRLTGLEQDRLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
+++ + L IL + R++++I +EL +K ++G ++ IR SE L+ + DLI
Sbjct: 479 QLLEVIAGLIHILEDPDRLLQVIREELVNVKAEFGDERRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+T+S+ GY+K QP+S YRAQ+RGGRG+ A TK+ED+I QL++ NTHD +L F+
Sbjct: 534 APEDVVVTVSHAGYVKRQPVSVYRAQRRGGRGRSAAATKEEDFIEQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V+Q+P+ N+RG+PIIN L+ E++ +LP+ R++ +VF +T
Sbjct: 594 SSGKVFWLPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPV----REYADGQFVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT LS F+ G IA+NL D L+G LTDG DI+LF+ +GK VRF E+
Sbjct: 650 KNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVGLTDGERDILLFASNGKTVRFGEDK 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQK---------------------------- 751
VR+MGR+A GV G+++ ++V++L+V+ +
Sbjct: 710 VRSMGRTATGVRGIKMPAGEEVVSLIVAESAGGIEDENEDDNGVEEAVANGDAVIDGADD 769
Query: 752 ---QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
Q +LTATENGYGKRT + +Y + RGT+G+I I+T +RNGK+VAA L+ E++LI
Sbjct: 770 ASVQYILTATENGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGSGDEVLLI 829
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
+ GG L+RTR SEI ++GR+TQGV LI + KL V+R+
Sbjct: 830 SDGGTLVRTRGSEISRVGRNTQGVTLIRLSKDEKLQAVERM 870
>gi|145634404|ref|ZP_01790114.1| DNA gyrase subunit A [Haemophilus influenzae PittAA]
gi|145268384|gb|EDK08378.1| DNA gyrase subunit A [Haemophilus influenzae PittAA]
Length = 882
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/871 (52%), Positives = 609/871 (69%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDK+T++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKKTVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIEAFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 424 LLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +T+ S +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITNSSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + + +LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNTEASLDLNIDKVVSLVVPKGEGE-ILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|118602340|ref|YP_903555.1| DNA gyrase subunit A [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567279|gb|ABL02084.1| DNA gyrase subunit A [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 861
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/848 (51%), Positives = 609/848 (71%), Gaps = 10/848 (1%)
Query: 3 QFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRP 62
F + + +E+EM SYL+YAMSVIVGRALPDVRDGLKPVHRRVL+AM + N +N+
Sbjct: 10 HFKPNLPVVTIEDEMRNSYLEYAMSVIVGRALPDVRDGLKPVHRRVLYAMEVLGNDYNKS 69
Query: 63 FVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRY 122
+ K AR+VG+ +GKYHPHGD ++YD +VRMAQ FS+R L+DGQGNFGS+DGDSAAAMRY
Sbjct: 70 YKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRNILIDGQGNFGSVDGDSAAAMRY 129
Query: 123 TECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNI 182
TE R+ K+S+ELL DL+K T+DFI NYDG E EP VLPTR+PNLL NGSSGIAVGMATNI
Sbjct: 130 TEIRMAKLSHELLRDLEKNTVDFIDNYDGSESEPLVLPTRVPNLLANGSSGIAVGMATNI 189
Query: 183 PPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVII 242
PPHNL EVI+ L + N + +I++L++I+P PDFPTAGII G S + Y TGKG++ +
Sbjct: 190 PPHNLGEVIEACLKTIDNEDITIDELLEIMPGPDFPTAGIINGASGIRQAYETGKGKIYL 249
Query: 243 RAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMR 302
R+ HIE E++ +I++ ELPYQVNK L+ KI++LVK+K+++ I+ LRDESDK GMR
Sbjct: 250 RSVPHIEG-EGEDKQSIVVTELPYQVNKAKLIGKIAKLVKDKRIDGITGLRDESDKDGMR 308
Query: 303 IVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVI 362
+VIEL+R E+PE++LN LYK T++Q FG+NM+A+ G PKL+ LK IL FI HR++V+
Sbjct: 309 MVIELRRGEVPEVMLNNLYKLTEMQTVFGINMVAIDKGMPKLMTLKNILEAFIAHRRDVV 368
Query: 363 KRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSK 422
RR+IF+L KAR +AH+LEGL +AL NID+ I++I+S S +AK ++ TW + +
Sbjct: 369 TRRSIFDLNKARNHAHLLEGLAVALHNIDDIIELIKSASNSIDAKEVLVAKTWQGSVIKE 428
Query: 423 IIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENV 482
+IG + LQ + Y+LS Q Q IL + L RLT +E+ KI +++ +
Sbjct: 429 LIGDRDMVMFKPEDLPTELGLQMDGDYQLSQKQVQAILDLKLHRLTGLEKNKIFDEFNEL 488
Query: 483 IKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQ 542
++++ L DIL +R++++I +EL I++ Y N R ++I+ + I+ + EDLI +
Sbjct: 489 LERIKYLLDILQTPERLMQVIREELIDIQSNYA----NARMTQILEHKIDLTLEDLITQE 544
Query: 543 DMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYG 602
V+TLS+ GY+K+Q +S+Y+AQ+RGG+GK A KDED+++QLFIAN+HD +LCFS+ G
Sbjct: 545 RRVVTLSHGGYVKAQSLSDYQAQRRGGKGKVATKVKDEDFVDQLFIANSHDTVLCFSSLG 604
Query: 603 RLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLG 662
++YWLKV+++P SR +RGKPI+N+ L+ +E I IL +S F +N++VFM TS G
Sbjct: 605 KVYWLKVYELPMASRIARGKPIVNLLPLEKEEIINAILTVSK----FDENHFVFMVTSSG 660
Query: 663 IVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRA 722
KKT+L+NFS PRK GIIA+ L + D LIG +T G +DIMLFS +GK++RF E+ VR
Sbjct: 661 TCKKTVLTNFSKPRKGGIIAIELKDNDQLIGVEITSGEHDIMLFSANGKSIRFKESDVRV 720
Query: 723 MGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGII 782
+GR+A GV G++L KV++L+V NQ +LT TE G+GKRT + EY RG G+I
Sbjct: 721 VGRTAIGVRGIKLANADKVVSLIVV-NQDNPILTTTEKGFGKRTRLNEYRSQARGGLGVI 779
Query: 783 SIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSK 842
SIKT+ RNGKVV A + E+MLI+ G L+R R ++ +GR+TQGV LI + K
Sbjct: 780 SIKTSDRNGKVVGAIQITDEDEMMLISNKGTLVRARAVDVSIIGRNTQGVTLINIIKGEK 839
Query: 843 LCGVQRLC 850
L + ++
Sbjct: 840 LVSIAKIA 847
>gi|340782128|ref|YP_004748735.1| DNA gyrase subunit A [Acidithiobacillus caldus SM-1]
gi|340556281|gb|AEK58035.1| DNA gyrase subunit A [Acidithiobacillus caldus SM-1]
Length = 847
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/846 (51%), Positives = 604/846 (71%), Gaps = 19/846 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE I + LE+EM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHEM N WN
Sbjct: 1 MVDFAKETIPVSLEKEMRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHEMGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGDV++YD +VRMAQ FS+R L+DGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDVAVYDTIVRMAQDFSMRYPLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++E+L D+++ET+DF NYD KE EP VLP RIPNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMARIAHEMLADIERETVDFGPNYDEKEVEPQVLPARIPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++ + ++ + + ++L +++PAPDFPTAGI+ G + Y +G+GRV
Sbjct: 181 NIPPHNLTEILNACIALVDDDDLPDSELFRLVPAPDFPTAGILLGNEGAIEAYRSGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ IE + R I + ELPYQVNK L+E+I+++VKEK+L+ +S+LRDESDKSG
Sbjct: 241 VMRARAEIETDAKSGRQTIAVSELPYQVNKAKLIERIAEMVKEKRLDGVSDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IELKR+ E+VLN LY+ T LQ+ F +NM+AL++G P+ L L++ L F+ HR+E
Sbjct: 301 MRIAIELKRDANAEVVLNNLYQHTALQSVFNINMVALLDGAPQTLGLRDALKAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR+IF+L+KAR+ AHILEGL +AL N+D I +IR+ ++P EAK +++ W V
Sbjct: 361 VVTRRSIFDLKKARDRAHILEGLAVALVNLDPLIALIRAAASPAEAKAQMLARVWEPGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ + +++ S D Y LS+ QAQ IL + L RLT +EQ KI +Y
Sbjct: 421 AAL----------LAERGEPSAGLQADGYHLSEAQAQAILDLRLHRLTGLEQDKIREEYL 470
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L +IL + R++ +I EL I+++YG + RRSEI+ + + EDLIA
Sbjct: 471 GLLERIRELLEILGSDARLMAVIRAELVAIRDQYG----DARRSEIVADTGVIANEDLIA 526
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
++MV+T ++ GYIK+QP++ + AQ+RGGRGK A TK+ED++ ++F A+TH +L FSN
Sbjct: 527 EENMVVTFTHAGYIKAQPVTTFNAQRRGGRGKVATTTKEEDFVERMFCASTHATVLFFSN 586
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++W KV+Q+PQ R++RGKPI+N+ SL E IT +LP+ R+F + YV M T+
Sbjct: 587 LGKVFWQKVYQLPQSGRSARGKPIVNLLSLAPSEGITTVLPV----REFQEGQYVCMVTA 642
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L +S PR GI A+NL D L+ L+DG + MLF+ G AVRF E+ V
Sbjct: 643 HGVVKKTPLMEYSRPRSQGINAINLDPGDRLVAVCLSDGQREFMLFTRKGMAVRFPEDKV 702
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+ L+ +VI+ + + Q +LTAT GYGK T ++EY + NRG KG
Sbjct: 703 RPMGRTARGVRGISLDADDRVISAQIV-DPDQVILTATAKGYGKLTNVEEYRRTNRGGKG 761
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+TN RNG+VV A V E+ML++ GG LIR V IR+ GR+ QGV LI +
Sbjct: 762 VIAIQTNARNGQVVGALAVKESDELMLVSNGGTLIRIAVQGIRRTGRNAQGVRLIQLAPD 821
Query: 841 SKLCGV 846
+L G+
Sbjct: 822 EQLAGL 827
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 651 KNNYVFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDFLIGAALTDGSYDIMLFSD 708
+ N V T G +K ++ F+ R+ G +A EDF+ ++ FS+
Sbjct: 527 EENMVVTFTHAGYIKAQPVTTFNAQRRGGRGKVATTTKEEDFVERMFCASTHATVLFFSN 586
Query: 709 SGKAVRFNENSVRAMGRSARG---VIGMRLEKKQKVIALLVSN--NQKQSVLTATENGYG 763
GK + GRSARG V + L + + +L + Q V T +G
Sbjct: 587 LGKVFWQKVYQLPQSGRSARGKPIVNLLSLAPSEGITTVLPVREFQEGQYVCMVTAHGVV 646
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
K+T + EY++ ++GI +I + + ++VA L + E ML T G+ +R ++R
Sbjct: 647 KKTPLMEYSRPR--SQGINAINLDPGD-RLVAVCLSDGQREFMLFTRKGMAVRFPEDKVR 703
Query: 824 KMGRSTQGVILITVENKSKLCGVQ 847
MGR+ +GV I+++ ++ Q
Sbjct: 704 PMGRTARGVRGISLDADDRVISAQ 727
>gi|440510046|ref|YP_007347482.1| DNA gyrase subunit A [Candidatus Blochmannia chromaiodes str. 640]
gi|440454259|gb|AGC03751.1| DNA gyrase subunit A [Candidatus Blochmannia chromaiodes str. 640]
Length = 843
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/851 (53%), Positives = 615/851 (72%), Gaps = 18/851 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MN FAKE+ I +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRR+LFAM + N WN
Sbjct: 1 MNDFAKEITQINIEEELTHSYLDYAMSVIVGRALPDVRDGLKPVHRRILFAMQVLGNCWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ F +R LVDGQGNFGS+DGD AAAM
Sbjct: 61 RNHKKSARVVGDVIGKYHPHGDTAVYETIVRMAQPFLMRYALVDGQGNFGSVDGDPAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+NELL+DLDKET+D+ NYDG E P +LP RIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIANELLLDLDKETVDYELNYDGTESIPGILPARIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVI+G L + N + +I +L+K IP PDFPTA II + + Y TG+G++
Sbjct: 181 NIPPHNLSEVINGCLAFIDNEDITIEELMKYIPGPDFPTAAIINDSGGLKEAYSTGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA++ IE + R +I+I E+PYQVNK LLEKI++L K K++E I NLRDESDK G
Sbjct: 241 YIRARSEIETDVKSGRESIVIYEIPYQVNKARLLEKIAELAKLKRIEGIYNLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+KR+ I E++LN LY T LQ +FG+NM+AL GQPK+++LK+IL F+ HR+
Sbjct: 301 MRIVVEIKRDAISEVILNNLYSLTSLQTSFGINMVALHQGQPKIMSLKDILSAFVCHRRV 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR FEL+KAR HILEGL IAL NID+ I++IR +++ EA + +I S+WN+ +V
Sbjct: 361 VVIRRVTFELKKARNRIHILEGLAIALFNIDSVIKLIRQSNSSVEASSVLISSSWNIGNV 420
Query: 421 SKIIGFNKKNYNTI----SKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKII 476
F+ K +I S+ + + +N+ Y L+ QAQ IL + L +LT +E +K++
Sbjct: 421 -----FDMKQRTSINLMKSEGSEVKNAVHNNQYYLTKNQAQAILDLKLHKLTTLEYEKLL 475
Query: 477 NKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTE 536
+Y ++++K+ +L IL + K ++++I EL +I+ +Y RR+EI N N + E
Sbjct: 476 QEYSSLLEKIKNLISILKDPKCLMKVIRQELLMIQEEYNDS----RRTEISSNIENINVE 531
Query: 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYIL 596
+LI +D+V+TLS GY+K QP+++Y AQKRGG+GK A K+ED+I +L IANTHD +L
Sbjct: 532 NLINQKDVVVTLSYQGYVKYQPLTDYEAQKRGGKGKLATRIKEEDFITRLLIANTHDTVL 591
Query: 597 CFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVF 656
FSNYGR+YW+KV+++P SR SRGKPIIN+ L E+IT ILP+ N + + VF
Sbjct: 592 LFSNYGRIYWMKVYRLPAASRGSRGKPIINLLPLDVNERITAILPIQN----YTTGHQVF 647
Query: 657 MSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFN 716
M+TS G+VKKT L+ FS PR GIIA+NL++ D LIGA +TDGS ++MLF+ GK VRF
Sbjct: 648 MATSSGVVKKTPLTEFSRPRNVGIIALNLNDGDELIGADVTDGSNEVMLFTAYGKVVRFK 707
Query: 717 ENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNR 776
E VR++GRSA GV G+ L + +V++L++ + K S+LT T NG+GKRT EY +R
Sbjct: 708 ETQVRSVGRSAIGVKGIHLLQGDRVVSLIIPKD-KSSILTVTRNGFGKRTNQSEYPIKSR 766
Query: 777 GTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILIT 836
T+G+ISIK +RNG V+ A VN+ +I++IT G L+RTRVSE+ + R+TQGV+LI
Sbjct: 767 ATQGVISIKVTERNGHVIGAVQVNQSDQIVMITDLGRLVRTRVSEVNIIRRNTQGVMLIR 826
Query: 837 VENKSKLCGVQ 847
+ G+Q
Sbjct: 827 TACDECVVGLQ 837
>gi|419932878|ref|ZP_14450157.1| DNA gyrase subunit A, partial [Escherichia coli 576-1]
gi|388415154|gb|EIL75089.1| DNA gyrase subunit A, partial [Escherichia coli 576-1]
Length = 788
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/796 (53%), Positives = 592/796 (74%), Gaps = 10/796 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M+ A+E+ + +EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ + N WN
Sbjct: 1 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE RL KI++EL+ DL+KET+DF+ NYDG EK P V+PT+IPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + + + SI L++ IP PDFPTA II G + + Y TG+G+V
Sbjct: 181 NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ +E + R II+ E+PYQVNK L+EKI++LVKEK++E IS LRDESDK G
Sbjct: 241 YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVIE+KR+ + E+VLN LY QTQLQ +FG+NM+AL +GQPK++NLK+I+ F+ HR+E
Sbjct: 301 MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR+ AHILE L +AL NID I++IR TP EAK ++ + W L +V
Sbjct: 361 VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ ++ + + +++ +Y L++ QAQ IL + LQ+LT +E +K++++Y+
Sbjct: 421 AAMLERAGDDAARPEWLEPEFGVRDG-LYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++ ++ +L IL ++ R++E+I +EL +++ ++G RR+EI N+ + + EDLI
Sbjct: 480 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDK----RRTEITANSADINLEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+SEY AQ+RGG+GK A K+ED+I++L +ANTHD+ILCFS+
Sbjct: 536 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSS 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
GR+Y +KV+Q+P+ +R +RG+PI+N+ L+ E+IT ILP++ +F + VFM+T+
Sbjct: 596 RGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVT----EFEEGVKVFMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT+L+ F+ R +G +A+ L D LIG LT G ++MLFS GK VRF E+SV
Sbjct: 652 NGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSV 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
RAMG + GV G+RL + KV++L+V ++LTAT+NGYGKRT + EY +R TKG
Sbjct: 712 RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKG 770
Query: 781 IISIKTNKRNGKVVAA 796
+ISIK +RNG VV A
Sbjct: 771 VISIKVTERNGLVVGA 786
>gi|56460468|ref|YP_155749.1| DNA gyrase subunit A [Idiomarina loihiensis L2TR]
gi|56179478|gb|AAV82200.1| DNA gyrase subunit A [Idiomarina loihiensis L2TR]
Length = 828
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/831 (52%), Positives = 604/831 (72%), Gaps = 23/831 (2%)
Query: 52 MHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGS 111
M E+ N +N+P+ K ARVVG+ +GKYHPHGD ++YD +VRMAQ+FSLR LVDGQGNFGS
Sbjct: 1 MSELRNDFNKPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQNFSLRYMLVDGQGNFGS 60
Query: 112 IDGDSAAAMRYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGS 171
+DGDSAAAMRYTE R+ KI+++LL DLDKET+DF+ NYDG E+ P VLPTR+PNLL+NGS
Sbjct: 61 VDGDSAAAMRYTEIRMAKIAHQLLADLDKETVDFVDNYDGTERIPDVLPTRVPNLLVNGS 120
Query: 172 SGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHD 231
SGIAVGMATNIPPHNLTEV+DG L ++ NP+ + L++ IP PDFPTA I G S + +
Sbjct: 121 SGIAVGMATNIPPHNLTEVVDGALAMIDNPDIDVEGLMEYIPGPDFPTAATISGRSGIVE 180
Query: 232 GYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISN 291
Y TG+GR+ +RA+ IE + + II+ E+PYQVNK L+EKI++LVKEK++E IS
Sbjct: 181 AYKTGRGRIHLRAQAEIEVDEKTGKETIIVTEIPYQVNKARLIEKIAELVKEKRVEGISA 240
Query: 292 LRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEIL 351
LRDESDK GMRIVIE++R ++ E+VLN LY TQLQ FG+NM+AL GQP+L NL+++L
Sbjct: 241 LRDESDKDGMRIVIEIRRGDVGEVVLNHLYANTQLQVVFGINMVALDKGQPRLFNLRDML 300
Query: 352 YYFILHRKEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKII 411
F+ HR+EV+ RR+++ELRKARE AHILEGL I+L NID I++IR + TP EAK +I
Sbjct: 301 DCFVRHRREVVTRRSVYELRKARERAHILEGLAISLANIDEIIELIRRSPTPAEAKAGLI 360
Query: 412 ESTWNLPDVSKII---GFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLT 468
W L DV+ ++ G + + + + I + Y L++ QAQ IL + L +LT
Sbjct: 361 ARAWQLGDVAAMLETAGVDAARPDHLPEEYGI----RDGNYHLTEEQAQAILDLRLHKLT 416
Query: 469 NMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIIL 528
+E +KI+++Y+ +++++ +L IL++S+R++E+I +EL I+N +G R+++I
Sbjct: 417 GLEHEKILDEYKGLLEQIAELLHILNSSERLMEVIREELVEIRNNFGDE----RKTDITA 472
Query: 529 NAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFI 588
A + S EDLI +D+V+TLS+ GY+K QP++EY AQ+RGG+GK A KDED+I +L++
Sbjct: 473 AAHDISMEDLINEEDVVLTLSHEGYVKYQPLTEYEAQRRGGKGKAATKMKDEDFIERLWV 532
Query: 589 ANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRD 648
ANTHD ILCFS GR+YW+KV+Q+P SR SRGKPI+N+ L+ E+IT ILP RD
Sbjct: 533 ANTHDTILCFSTRGRIYWMKVYQLPLASRASRGKPIVNLLPLEADERITAILP----TRD 588
Query: 649 FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSD 708
+P++ +V M+T G +KKT L +S PR GIIA+NL ++D LIG +TDG+ +IMLFSD
Sbjct: 589 YPEDKFVVMATRKGTIKKTPLPEYSRPRNGGIIALNLVDDDELIGVDITDGNGEIMLFSD 648
Query: 709 SGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVS---NNQKQSVLTATENGYGKR 765
+GK VRF E VR+MGR+A GV G+RLE+ Q+V++L+V ++ +VLT TENGYGKR
Sbjct: 649 AGKVVRFAEEQVRSMGRTATGVRGIRLEEGQRVVSLIVPREYEEEEANVLTVTENGYGKR 708
Query: 766 TLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKM 825
T + EY +R TKG++SIK ++RNG VV A V +EIMLI+ G L+RTRV+E+ +
Sbjct: 709 TPLSEYPAKSRATKGVVSIKVSERNGSVVGAMEVIDGNEIMLISNKGTLVRTRVNEVSTV 768
Query: 826 GRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVA 876
GR+TQGV LI + K+ G+QR+ +I + + IDG + +G A
Sbjct: 769 GRNTQGVRLIRTADDEKVVGLQRIDEIDEDE-----VLIDGEVVAEEGETA 814
>gi|386265763|ref|YP_005829255.1| DNA gyrase subunit A [Haemophilus influenzae R2846]
gi|309972999|gb|ADO96200.1| DNA gyrase subunit A [Haemophilus influenzae R2846]
Length = 882
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/871 (52%), Positives = 608/871 (69%), Gaps = 52/871 (5%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDK+T++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKKTVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y G+G+V +RA+ + E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRAGRGKVYVRARATV-ETN 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 EKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIEAFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ +L+ N + Y LS Q IL++ L RLT + +++I +YE ++ K+
Sbjct: 424 LLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +T+ S +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITNSSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + + +LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNTEASLDLNIDKVVSLVVPKGEGE-ILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
SE+ +GR+TQGV LI + + ++R+C
Sbjct: 835 SEVSIVGRNTQGVRLIRTADDEHVVSLERVC 865
>gi|254521504|ref|ZP_05133559.1| DNA gyrase, A subunit [Stenotrophomonas sp. SKA14]
gi|219719095|gb|EED37620.1| DNA gyrase, A subunit [Stenotrophomonas sp. SKA14]
Length = 904
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/881 (50%), Positives = 625/881 (70%), Gaps = 43/881 (4%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+N N
Sbjct: 1 MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELNAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVR+AQ FSLR LVDGQGNFGSIDGDSAAAM
Sbjct: 61 KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+E I+ + ++ NP+ ++ L++ IP PDFPTAGII G + + GY TG+GRV
Sbjct: 181 NIPPHNLSESINACIALIDNPDIDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRAK IE + R +II+ E+PYQVNK L+EKI++LVKEKK+E IS LRDESDK G
Sbjct: 241 RIRAKADIEVADN-GRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E E+VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L F+ HR+E
Sbjct: 300 MRIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRT+FELRKAR AH+LEGLT+AL NID I++I+++ P EA+ +++ W V
Sbjct: 360 VVTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPNEARERMLARVWEPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++G + + L Y+L++IQA +IL+M L RLT +EQ ++ ++Y+
Sbjct: 420 GAMLGAAGAEASRPEDLPKGVGLIEGG-YQLTEIQATQILEMRLHRLTGLEQDRLTDEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
+++ + L IL + R++++I +EL +K ++G ++ IR SE L+ + DLI
Sbjct: 479 QLLEVIAGLIHILEDPDRLLQVIREELVNVKAEFGDERRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+T+S+ GY+K QP+S YRAQ+RGGRG+ A TK+ED+I QL++ NTHD +L F+
Sbjct: 534 APEDVVVTVSHAGYVKRQPVSVYRAQRRGGRGRSAAATKEEDFIEQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V+Q+P+ N+RG+PIIN L+ E++ +LP+ R++ +VF +T
Sbjct: 594 SSGKVFWLPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPV----REYADGQFVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENS 719
G VKKT L F+ G IA+NL D L+G TDG DI+LF+ +GK VRF E+
Sbjct: 650 KNGTVKKTPLGEFAFRLARGKIAINLDEGDALVGVGRTDGERDILLFASNGKTVRFGEDK 709
Query: 720 VRAMGRSARGVIGMRLEKKQKVIALLVSNNQK---------------------------- 751
VR+MGR+A GV G+++ ++V++L+V+ +
Sbjct: 710 VRSMGRTATGVRGIKMPAGEEVVSLIVAESAGGIEDENEDDNGVEEIAANGDAVIDGADD 769
Query: 752 ---QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808
Q +LTATENGYGKRT + +Y + RGT+G+I I+T +RNGK+VAA L+ E++LI
Sbjct: 770 ASVQYILTATENGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGSGDEVLLI 829
Query: 809 TTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRL 849
+ GG L+RTR SEI ++GR+TQGV LI + KL V+R+
Sbjct: 830 SDGGTLVRTRGSEISRVGRNTQGVTLIRLSKDEKLQAVERM 870
>gi|255021281|ref|ZP_05293330.1| DNA gyrase subunit A [Acidithiobacillus caldus ATCC 51756]
gi|254969292|gb|EET26805.1| DNA gyrase subunit A [Acidithiobacillus caldus ATCC 51756]
Length = 847
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/846 (51%), Positives = 603/846 (71%), Gaps = 19/846 (2%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M FAKE I + LE+EM +SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMHEM N WN
Sbjct: 1 MVDFAKETIPVSLEKEMRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHEMGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGDV++YD +VRMAQ FS+R L+DGQGNFGS+DGDS AAM
Sbjct: 61 KPYKKSARVVGDVIGKYHPHGDVAVYDTIVRMAQDFSMRYPLIDGQGNFGSVDGDSPAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ +I++E+L D+++ET+DF NYD KE EP VLP RIPNLLINGS+GIAVGMAT
Sbjct: 121 RYTEVRMARIAHEMLADIERETVDFGPNYDEKEVEPQVLPARIPNLLINGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE+++ + ++ + + ++L +++P PDFPTAGI+ G + Y +G+GRV
Sbjct: 181 NIPPHNLTEILNACIALVDDDDLPDSELFRLVPGPDFPTAGILLGNEGAIEAYRSGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
++RA+ IE + R I + ELPYQVNK L+E+I+++VKEK+L+ IS+LRDESDKSG
Sbjct: 241 VMRARAEIETDAKSGRQTIAVSELPYQVNKAKLIERIAEMVKEKRLDGISDLRDESDKSG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IELKR+ E+VLN LY+ T LQ+ F +NM+AL++G P+ L L++ L F+ HR+E
Sbjct: 301 MRIAIELKRDANAEVVLNNLYQHTALQSVFNINMVALLDGAPQTLGLRDALKAFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RR+IF+L+KAR+ AHILEGL +AL N+D I +IR+ ++P EAK +++ W V
Sbjct: 361 VVTRRSIFDLKKARDRAHILEGLAVALVNLDPLIALIRAAASPAEAKAQMLARVWEPGLV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ + +++ S D Y LS+ QAQ IL + L RLT +EQ KI +Y
Sbjct: 421 AAL----------LAERGEPSAGLQADGYHLSEAQAQAILDLRLHRLTGLEQDKIREEYL 470
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+++++ +L +IL + R++ +I EL I+++YG + RRSEI+ + + EDLIA
Sbjct: 471 GLLERIRELLEILGSDARLMAVIRAELVAIRDQYG----DARRSEIVADTGVIANEDLIA 526
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
++MV+T ++ GYIK+QP++ + AQ+RGGRGK A TK+ED++ ++F A+TH +L FSN
Sbjct: 527 EENMVVTFTHAGYIKAQPVTTFNAQRRGGRGKVATTTKEEDFVERMFCASTHATVLFFSN 586
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G+++W KV+Q+PQ R++RGKPI+N+ SL E IT +LP+ R+F + YV M T+
Sbjct: 587 LGKVFWQKVYQLPQSGRSARGKPIVNLLSLAPSEGITTVLPV----REFQEGQYVCMVTA 642
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT L +S PR GI A+NL D L+ L+DG + MLF+ G AVRF E+ V
Sbjct: 643 HGVVKKTPLMEYSRPRSQGINAINLDPGDRLVAVCLSDGQREFMLFTRKGMAVRFPEDKV 702
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+ARGV G+ L+ +VI+ + + Q +LTAT GYGK T ++EY + NRG KG
Sbjct: 703 RPMGRTARGVRGISLDADDRVISAQIV-DPDQVILTATAKGYGKLTNVEEYRRTNRGGKG 761
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+TN RNG+VV A V E+ML++ GG LIR V IR+ GR+ QGV LI +
Sbjct: 762 VIAIQTNARNGQVVGALAVKESDELMLVSNGGTLIRIAVQGIRRTGRNAQGVRLIQLAPD 821
Query: 841 SKLCGV 846
+L G+
Sbjct: 822 EQLAGL 827
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 651 KNNYVFMSTSLGIVKKTLLSNFSNPRKSGI--IAVNLSNEDFLIGAALTDGSYDIMLFSD 708
+ N V T G +K ++ F+ R+ G +A EDF+ ++ FS+
Sbjct: 527 EENMVVTFTHAGYIKAQPVTTFNAQRRGGRGKVATTTKEEDFVERMFCASTHATVLFFSN 586
Query: 709 SGKAVRFNENSVRAMGRSARG---VIGMRLEKKQKVIALLVSN--NQKQSVLTATENGYG 763
GK + GRSARG V + L + + +L + Q V T +G
Sbjct: 587 LGKVFWQKVYQLPQSGRSARGKPIVNLLSLAPSEGITTVLPVREFQEGQYVCMVTAHGVV 646
Query: 764 KRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIR 823
K+T + EY++ ++GI +I + + ++VA L + E ML T G+ +R ++R
Sbjct: 647 KKTPLMEYSRPR--SQGINAINLDPGD-RLVAVCLSDGQREFMLFTRKGMAVRFPEDKVR 703
Query: 824 KMGRSTQGVILITVENKSKLCGVQ 847
MGR+ +GV I+++ ++ Q
Sbjct: 704 PMGRTARGVRGISLDADDRVISAQ 727
>gi|90416545|ref|ZP_01224476.1| DNA gyrase subunit A [gamma proteobacterium HTCC2207]
gi|90331744|gb|EAS46972.1| DNA gyrase subunit A [gamma proteobacterium HTCC2207]
Length = 893
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/850 (50%), Positives = 605/850 (71%), Gaps = 10/850 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ + +E+E+ +SYL YAMSVIVGRALPDVRDGLKPVHRR LFAM+E+ N WN
Sbjct: 1 MGDLAQEIVPVNIEDELKQSYLAYAMSVIVGRALPDVRDGLKPVHRRALFAMNELGNDWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ KI++ LL DL+K+T+DF+ NYD E+ P VLPTRIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMTKIAHALLEDLEKDTVDFVPNYDETEQIPHVLPTRIPNLLVNGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEV+ G L ++ NPE ++++L++ IP PDFPTA II G + + Y TG+GR+
Sbjct: 181 NIPPHNLTEVVKGCLAMIENPEITVDELMEYIPGPDFPTAAIINGRAGIIQAYRTGRGRI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + R III E+PYQ+NK L+E+I++LVKEKKLE IS LRDESDK G
Sbjct: 241 YVRAKADIEVNEKTRRETIIITEIPYQLNKARLIERIAELVKEKKLEGISELRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
+R+VIE+KR ++ E+VLN L+ QTQLQ+ FG+N++ALV+GQPK+LNL++++++F+ HR+E
Sbjct: 301 LRVVIEIKRTDVGEVVLNNLFAQTQLQSVFGINVVALVDGQPKILNLQQLIHHFLRHRRE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTI+ L+KARE AH LEG IAL NID I +I+++ + EA+ ++ WN V
Sbjct: 361 VVTRRTIYLLKKARERAHTLEGFAIALGNIDEIIALIKASPSATEAREALVARGWNPGSV 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+++ + + L++ Y LS QA++IL++ L RLT ME KII ++
Sbjct: 421 IQMLDRAGAQATRPEWLEDHYGLRDGK-YHLSPEQAKDILELRLHRLTGMEHDKIIAEFA 479
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++++ + DIL + R++ +I +EL + ++G RR+EII + + + EDLI
Sbjct: 480 VKLEEIAEYQDILGDLTRLMTVIREELEAVVEEFGDE----RRTEIIESLHDLTIEDLIT 535
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D V+T+SN GY K+QP+S+Y+AQ+RGG GK A KDED++ L +A+TH ILCF+N
Sbjct: 536 EEDRVVTISNGGYAKTQPLSDYQAQRRGGMGKSATAVKDEDFVEHLLVASTHATILCFTN 595
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV+QIP RNSRG+P+IN+ L E+I+ ILP+ ++ + +V M+T+
Sbjct: 596 LGKVYWLKVYQIPVAGRNSRGRPVINLLPLGEGERISSILPVE----EYSADKFVIMATA 651
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G VKKT L +S PR G+ AV+L D L+G A+ D D+ML S GKAVRF
Sbjct: 652 NGTVKKTSLEQYSRPRSVGLRAVDLVEGDHLVGTAIIDDDSDVMLLSSEGKAVRFASTDA 711
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R+MGR ++GV GMRL + +VI+++V + +LT ENGYGKRT + E+ RG KG
Sbjct: 712 RSMGRVSKGVRGMRLPEGHEVISMVVP-EEDGFLLTVCENGYGKRTKVDEFPTKGRGGKG 770
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+I+I+ ++RNG +V AT + EIMLI+ G ++RTR E+ +GR+TQGV +I +++
Sbjct: 771 MIAIQASERNGPLVGATQLFAGDEIMLISDQGTMVRTRGDEVSVVGRNTQGVRIIRLKDS 830
Query: 841 SKLCGVQRLC 850
L + R+
Sbjct: 831 ENLVRLARIA 840
>gi|322417550|ref|YP_004196773.1| DNA gyrase subunit A [Geobacter sp. M18]
gi|320123937|gb|ADW11497.1| DNA gyrase, A subunit [Geobacter sp. M18]
Length = 837
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/852 (51%), Positives = 605/852 (71%), Gaps = 46/852 (5%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
+NQ K +S+ +E+EM +SY+DYAMSVIVGRALPDVRDGLKPVHRR LFAM++M+N WN
Sbjct: 2 LNQLNK--VSVNIEDEMKRSYMDYAMSVIVGRALPDVRDGLKPVHRRCLFAMYDMSNDWN 59
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K ARVVG+ +GKYHPHGD ++YD LVRMAQ FSLR LVDGQGNFGSIDGDS AAM
Sbjct: 60 KPYKKSARVVGDVIGKYHPHGDTAVYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDSPAAM 119
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R+ ++++ELL DL+KET+ + NYD KEP VLP++ PNLL+NGS+GIAVGMAT
Sbjct: 120 RYTEIRMEQLAHELLADLEKETVPYGPNYDDSLKEPLVLPSKFPNLLVNGSAGIAVGMAT 179
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL+EVIDG++ ++ NP+ + +L+++IP PDFPT G IYG + Y TG+G +
Sbjct: 180 NIPPHNLSEVIDGIVAIIENPQLTFEELVEMIPGPDFPTGGFIYGREGIMKAYSTGRGII 239
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK IE + R +I++ E+PYQVNK L+EKI++LVKEKK+E IS+LRDESD+ G
Sbjct: 240 QMRAKVQIETQKKTERQSIVVTEIPYQVNKARLVEKIAELVKEKKIEGISDLRDESDREG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MR+VIELK++E P I+LN LYKQTQ+Q++FG+ MLA+V+ +P++L L+E + +FI HRKE
Sbjct: 300 MRVVIELKKDENPTILLNHLYKQTQMQSSFGIIMLAIVHNRPRVLTLRETIDFFIEHRKE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
++ RRTIF+L+KA AHILEGL IAL N+D I +I+++++P EAK ++E
Sbjct: 360 IVTRRTIFDLKKAEARAHILEGLKIALDNLDEVIALIKASASPAEAKTGLMER------- 412
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
+ LSD+QAQ IL M L RLT +E+ KI+ +
Sbjct: 413 ----------------------------FGLSDLQAQAILDMRLHRLTGLERDKIMEELR 444
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
++K + L +IL++ I++II EL +K+K+G RRSEI++ + S ED I
Sbjct: 445 EILKYIARLKEILASEAEILKIIVGELIELKDKFGDK----RRSEIVMQTADISLEDTIV 500
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+DMV+T+S+ GYIK ++ YRAQ+RGG+GK M TK+ED++ QLFIA+T DY++ F++
Sbjct: 501 EEDMVVTISHTGYIKRNAVTLYRAQRRGGKGKTGMKTKEEDFVEQLFIASTKDYLMFFTD 560
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G++YWLKV++IP+ R +RGK I+N+ +L EKIT ILP+ ++F + ++ M+T
Sbjct: 561 AGKVYWLKVYEIPEAGRAARGKAIVNLLNLAANEKITAILPV----KEFVDDKFIMMATR 616
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
G+VKKT + +S+PR GIIAVNL D LI ALTDG D++L + +GKA+RF E+ V
Sbjct: 617 NGVVKKTNMMEYSHPRVGGIIAVNLDEGDKLISVALTDGKQDVLLATANGKAIRFKEDDV 676
Query: 721 RAMGRSARGVIGMRLEKKQKV-IALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTK 779
R +GR +RGV GM LE + +A+L + ++ T TENGYGKRT I EY +RG K
Sbjct: 677 RTVGRVSRGVRGMALEDDVVIGMAILNEHFTDSTIFTVTENGYGKRTEISEYRTQSRGGK 736
Query: 780 GIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVEN 839
G+I+IKT +RNG+VV VN +++MLIT G ++R +VS +GR+TQGV L+ E
Sbjct: 737 GVITIKTTERNGQVVDIKQVNDDNDLMLITDQGKILRVQVSGFSIIGRNTQGVRLMVKEE 796
Query: 840 KSKLCGVQRLCK 851
++ V RL +
Sbjct: 797 NERVVAVARLAE 808
>gi|380511910|ref|ZP_09855317.1| DNA gyrase subunit A [Xanthomonas sacchari NCPPB 4393]
Length = 938
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/921 (49%), Positives = 631/921 (68%), Gaps = 83/921 (9%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+ N
Sbjct: 1 MAESAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR +VDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYYKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++E++ D+DKET+DF NYD KE+EPSV+PTR P+LL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLAHEMMADIDKETVDFQPNYDEKEQEPSVMPTRFPSLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ L ++ NP+ ++ L++ IP PDFPTAGI+ G + + GY TG+GRV
Sbjct: 181 NIPPHNLTESINACLALIDNPQIDVDGLMEHIPGPDFPTAGIVNGTTGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E R AI++ E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RMRAKAEI-EIQDNGREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E ++VLN LY+QTQ+++ FG+NM+ALV+G+P+LLNLK++L F+ HR+E
Sbjct: 300 MRIYIEVKRGEAADVVLNNLYQQTQMESVFGINMVALVDGRPQLLNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AHILEGLT+AL NID I++I++++ P EA+ +++ TW V
Sbjct: 360 VVTRRTIFELRKARARAHILEGLTVALANIDEMIELIKTSANPNEARERMLAKTWQPGLV 419
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
++ + + + L Y+L+++QA +IL+M L RLT +EQ+++ +Y+
Sbjct: 420 GALLNAAGAEASRPEDLPSGVGLVGGG-YQLTEVQATQILEMRLHRLTGLEQERLTEEYK 478
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTEDLI 539
+++ + L IL N ++++I +EL I+ +YG ++ IR SE L+ + DLI
Sbjct: 479 QLLEAIAGLIRILENPDVLLQVIREELVNIREEYGDARRTEIRHSEEDLDIL-----DLI 533
Query: 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFS 599
A +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L F+
Sbjct: 534 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTFT 593
Query: 600 NYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMST 659
+ G+++WL V Q+P+ N+RG+PI+N L+N E++ +LP+ R++ + YVF +T
Sbjct: 594 SSGKVFWLPVHQLPEAGPNARGRPIVNWIPLENGERVQAVLPV----REYAEGRYVFFAT 649
Query: 660 SLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE-- 717
G+VKKT LS F+ RK G IA+NL D L+G ALTDG D++LF+ +GK VRF+E
Sbjct: 650 RNGMVKKTPLSEFAFQRKIGKIAINLDEGDALVGVALTDGERDVLLFASNGKTVRFSERP 709
Query: 718 -----------------------------------------NSVRAMGRSARGVIGMRLE 736
V+ GRS+RGV G+RL
Sbjct: 710 KDDETDDAAVDEAAADDGAVADDEAGGEEGDDARGARRKSRGGVKPTGRSSRGVRGIRLA 769
Query: 737 KKQKVIALLVS----------------------------NNQKQSVLTATENGYGKRTLI 768
K + V++L+V+ + +LTATENGYGKRT +
Sbjct: 770 KSEYVVSLIVAEPAVGQDEDAEDVDAAADTEVEAEARNGDEADAYILTATENGYGKRTPL 829
Query: 769 KEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRS 828
EY + RGT+G+I I+T++RNGK+V A L++ E++LI+ GG L+RTR SEI ++GR+
Sbjct: 830 GEYPRKGRGTQGVIGIQTSERNGKLVGAVLLSTRDEVLLISDGGTLVRTRASEISRVGRN 889
Query: 829 TQGVILITVENKSKLCGVQRL 849
TQGV LI + KL V+RL
Sbjct: 890 TQGVTLIRLSKGEKLQAVERL 910
>gi|417839823|ref|ZP_12485989.1| DNA gyrase subunit A [Haemophilus haemolyticus M19107]
gi|341951616|gb|EGT78180.1| DNA gyrase subunit A [Haemophilus haemolyticus M19107]
Length = 865
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/871 (52%), Positives = 606/871 (69%), Gaps = 53/871 (6%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M N N+ +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV++
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLN 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N E +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E N
Sbjct: 194 GCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVET-N 252
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ R II+ ELPYQVNK L+EKI++L++EKK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 253 AKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLKEI+ F+LHR+EV+ RR+IFELRK
Sbjct: 313 GEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIEAFVLHRREVVTRRSIFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR++ +EA I +W L S II N
Sbjct: 373 ARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLH--SDII-------N 423
Query: 433 TISKINNISKLQNN-----DMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVI 487
+ L+ N + Y LS Q IL++ L RLT + ++++ +YE ++ K+
Sbjct: 424 LLDVSARPDDLEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVVKEYEELLVKIA 483
Query: 488 DLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547
DL ILS+++R++E+I +EL +K ++G R +EI + + EDLIA +D+V+T
Sbjct: 484 DLLHILSSAERLMEVIREELEEVKAQFGDD----RLTEITAASGDIDLEDLIAQEDVVVT 539
Query: 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWL 607
LS+ GY+K QP+++Y AQ+RGG+GK A K+ED+I +L +ANTHD ILCFS+ GRLYWL
Sbjct: 540 LSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWL 599
Query: 608 KVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKT 667
KV+Q+PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK
Sbjct: 600 KVYQLPQASRGARGRPIVNILPLQENERITAILPVSA----YEEDKFVVMATAGGIVKKI 655
Query: 668 LLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSA 727
L+ FS PR +GIIA+NL +ED LIG +TDGS +IMLFS G+ VRF EN+VRAMGR A
Sbjct: 656 ALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLA 715
Query: 728 RGVIGMRLEKK----------------------------QKVIALLVSNNQKQSVLTATE 759
GV G++L KV++L+V + ++LTAT+
Sbjct: 716 TGVRGIKLALTNDISDDESAVEIEDISDDNAETSLDLNIDKVVSLVVPKGEG-AILTATQ 774
Query: 760 NGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRV 819
NGYGKRT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRV
Sbjct: 775 NGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRV 834
Query: 820 SEIRKMGRSTQGVILITVENKSKLCGVQRLC 850
+E+ +GR+TQGV LI + + R C
Sbjct: 835 NEVTIVGRNTQGVRLIRTADDEHVVSF-RAC 864
>gi|325577977|ref|ZP_08148171.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Haemophilus
parainfluenzae ATCC 33392]
gi|325160210|gb|EGC72338.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Haemophilus
parainfluenzae ATCC 33392]
Length = 881
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/868 (51%), Positives = 607/868 (69%), Gaps = 42/868 (4%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + + +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQSGITAGKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV+D
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLD 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E +
Sbjct: 194 GCLAYIDNENITIDELMQYIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARASVETTD 253
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ + II+ ELPYQVNK L+EKI++L+K+KK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 254 K-GKEQIIVTELPYQVNKAKLVEKIAELIKDKKIEGISNIIDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLK+I+ F++HR+EV+ RR++FELRK
Sbjct: 313 GEVVLNHLYALTQMQVTFGINMVALDHGQPRLFNLKQIIEAFVMHRREVVIRRSLFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR + +EA K+I W L + +I+G
Sbjct: 373 ARERTHILEGLAVATSNIDEVIDIIRQSKERKEAAEKLISRPWKLNN--EILGLLDAAAR 430
Query: 433 TISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDI 492
++ +D Y LS Q IL++ L RLT + +++IN+Y+ ++ K+ +L I
Sbjct: 431 PAELAAEFG-IKGSDYY-LSPEQVDAILELRLHRLTGLATEEVINEYKELLVKIAELLHI 488
Query: 493 LSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLG 552
+++ +R++E+I +EL ++ ++ RR+EI + + EDLIA +D+V+TLS+ G
Sbjct: 489 INSPERLMEVIREELEQVRAQFADE----RRTEITAASGDIDLEDLIAQEDVVVTLSHEG 544
Query: 553 YIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQI 612
Y+K QP+++Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS+ GRLYWLKV+Q+
Sbjct: 545 YVKYQPLTDYEAQRRGGKGKSATKMKDEDFIEKLLVANTHDTILCFSSRGRLYWLKVYQL 604
Query: 613 PQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNF 672
PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK L+ F
Sbjct: 605 PQASRGARGRPIVNILPLQENERITAILPISA----YEEDKFVIMATAGGIVKKIALTEF 660
Query: 673 SNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIG 732
S PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF E++VRAMGR A GV G
Sbjct: 661 SRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAESAVRAMGRLATGVRG 720
Query: 733 MRLEKK----------------------------QKVIALLVSNNQKQSVLTATENGYGK 764
++L KV++L+V N ++LTAT+NGYGK
Sbjct: 721 IKLALTNDIADDESAVEIEEVSDDNAEETLDLNIDKVVSLVVPKNDG-AILTATQNGYGK 779
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRVSE+
Sbjct: 780 RTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRVSEVSI 839
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCKI 852
+GR+TQGV LI + ++R+C +
Sbjct: 840 VGRNTQGVRLIRTAEDEHVVSLERVCDV 867
>gi|345430492|ref|YP_004823613.1| DNA gyrase (type II topoisomerase), subunit A [Haemophilus
parainfluenzae T3T1]
gi|301156556|emb|CBW16027.1| DNA gyrase (type II topoisomerase), subunit A [Haemophilus
parainfluenzae T3T1]
Length = 881
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/868 (51%), Positives = 607/868 (69%), Gaps = 42/868 (4%)
Query: 13 LEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGE 72
+EEE+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLF+M + + +VK ARVVG+
Sbjct: 14 IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQSGITAGKKYVKSARVVGD 73
Query: 73 TMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECRLNKISN 132
+GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGSIDGD+ AAMRYTE R+ KI+
Sbjct: 74 VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQ 133
Query: 133 ELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTEVID 192
LL DLDKET++F NYDG+ P VLPTRIP LL NGSSGIAVGMATNIPPHNL EV+D
Sbjct: 134 ALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLD 193
Query: 193 GVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFN 252
G L + N +I++L++ IP PDFPTA +I G + + Y TG+G+V +RA+ +E +
Sbjct: 194 GCLAYIDNENITIDELMQYIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARASVETTD 253
Query: 253 RENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEI 312
+ + II+ ELPYQVNK L+EKI++L+K+KK+E ISN+ D S+K G+RI I++KR+ +
Sbjct: 254 K-GKEQIIVTELPYQVNKAKLVEKIAELIKDKKIEGISNIIDLSNKEGIRIEIDIKRDAV 312
Query: 313 PEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRTIFELRK 372
E+VLN LY TQ+Q TFG+NM+AL +GQP+L NLK+I+ F++HR+EV+ RR++FELRK
Sbjct: 313 GEVVLNHLYALTQMQVTFGINMVALDHGQPRLFNLKQIIEAFVMHRREVVIRRSLFELRK 372
Query: 373 AREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYN 432
ARE HILEGL +A +NID I IIR + +EA K+I W L + +I+G
Sbjct: 373 ARERTHILEGLAVATSNIDEIIDIIRQSKERKEAAEKLISRPWKLNN--EILGLLDAAAR 430
Query: 433 TISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDI 492
++ +D Y LS Q IL++ L RLT + +++IN+Y+ ++ K+ +L I
Sbjct: 431 PAELAAEFG-IKGSDYY-LSPEQVDAILELRLHRLTGLATEEVINEYKELLVKIAELLHI 488
Query: 493 LSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQDMVITLSNLG 552
+++ +R++E+I +EL ++ ++ RR+EI + + EDLIA +D+V+TLS+ G
Sbjct: 489 INSPERLMEVIREELEQVRAQFADE----RRTEITAASGDIDLEDLIAQEDVVVTLSHEG 544
Query: 553 YIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQI 612
Y+K QP+++Y AQ+RGG+GK A KDED+I +L +ANTHD ILCFS+ GRLYWLKV+Q+
Sbjct: 545 YVKYQPLTDYEAQRRGGKGKSATKMKDEDFIEKLLVANTHDTILCFSSRGRLYWLKVYQL 604
Query: 613 PQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNF 672
PQ SR +RG+PI+N+ L+ E+IT ILP+S + ++ +V M+T+ GIVKK L+ F
Sbjct: 605 PQASRGARGRPIVNILPLQENERITAILPISA----YEEDKFVIMATAGGIVKKIALTEF 660
Query: 673 SNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIG 732
S PR SGIIA+NL +ED LIG +TDGS +IMLFS G+ VRF E++VRAMGR A GV G
Sbjct: 661 SRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAESAVRAMGRLATGVRG 720
Query: 733 MRLEKK----------------------------QKVIALLVSNNQKQSVLTATENGYGK 764
++L KV++L+V N ++LTAT+NGYGK
Sbjct: 721 IKLALTNDIADDESAVEIEEVSDDNAEETLDLNIDKVVSLVVPKNDG-AILTATQNGYGK 779
Query: 765 RTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRK 824
RT + EY +R TKG+ISIK ++RNGKVVAAT V +IMLIT G L+RTRVSE+
Sbjct: 780 RTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRVSEVSI 839
Query: 825 MGRSTQGVILITVENKSKLCGVQRLCKI 852
+GR+TQGV LI + ++R+C +
Sbjct: 840 VGRNTQGVRLIRTAEDEHVVSLERVCDV 867
>gi|33519927|ref|NP_878759.1| DNA gyrase subunit A [Candidatus Blochmannia floridanus]
gi|33504273|emb|CAD83165.1| DNA gyrase subunit A [Candidatus Blochmannia floridanus]
Length = 862
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/860 (52%), Positives = 614/860 (71%), Gaps = 15/860 (1%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
MN AKE+ I +EEE+ +SYLDYAMSVIVGRALPDVRDGLKPVHRR+LFAM + N WN
Sbjct: 1 MNDLAKEITPIYIEEELKRSYLDYAMSVIVGRALPDVRDGLKPVHRRILFAMQVLGNCWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
R + K AR+VG+ +GKYHPHGDV++Y+A+VRMAQ F +R L+DGQGNFGS+DGD AAAM
Sbjct: 61 RSYKKSARIVGDVIGKYHPHGDVAVYEAIVRMAQPFLMRYALIDGQGNFGSVDGDPAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KI+NELL DL+KET+D+ NYDG E+ P +LPTRIPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKIANELLFDLEKETVDYELNYDGTEQIPEILPTRIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTEVI+G L + N + +I+ L+K IP PDFP+A II + + Y TG+G++
Sbjct: 181 NIPPHNLTEVINGCLAFIDNEDITIDSLMKYIPGPDFPSAAIINDYRGLKEAYETGRGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA++ IE + R +I+I E+PYQ+NK LLEKI++LVK K++E I NLRDESDK G
Sbjct: 241 YIRARSEIETDIKTGRESIVIYEIPYQINKSRLLEKIAELVKTKRIEGIYNLRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIVI++K + I EIVLN LY T LQ +FG+NM+AL NGQPK ++LK+IL F+ HR+
Sbjct: 301 MRIVIDIKHDAISEIVLNNLYSLTSLQISFGINMVALHNGQPKTMSLKDILSAFVCHRRS 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
+I RR +FEL+KA H+LEGL +AL+NID I +I+ T + +A ++ W +
Sbjct: 361 IITRRIMFELKKASNRVHVLEGLIVALSNIDIVIALIQQTESITQANAELTSKLW---ES 417
Query: 421 SKIIGFNKKNYNTI--SKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ II KK + S + S ++ + Y + QAQ IL++ L +LT++E +K++ +
Sbjct: 418 NNIINMRKKISVDLLHSGWLDASNIKKDSGYYFTKNQAQAILELRLHKLTHLEYEKLVIE 477
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAI-NPSTED 537
YENV+KK+ +L +L N ++ +I EL IK +Y + RR+EI N + N E+
Sbjct: 478 YENVLKKMENLICVLQNPSSLMGLIRQELVSIKEEY----NDPRRTEISENIVSNIDLEN 533
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LI +D+V+TLS GY+K QP+++Y AQKRGG+GK K+ED+I QL IANTHD +L
Sbjct: 534 LINQRDVVVTLSYQGYVKYQPLTDYEAQKRGGKGKLTTRIKEEDFITQLLIANTHDTVLL 593
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
FSNYGR+YW+KV+++P+ ++ SRG+PIIN+ L E+ITVILP+ N + + VFM
Sbjct: 594 FSNYGRIYWMKVYRLPKANKGSRGRPIINLLPLDTNERITVILPVQN----YTTGHQVFM 649
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+TS G VKKT L FS PR GIIA+NL+N D LIGA +T+G ++MLF+ GK VRF E
Sbjct: 650 ATSSGFVKKTALMEFSRPRNVGIIALNLNNGDELIGADITNGDNEVMLFTAYGKVVRFQE 709
Query: 718 NSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRG 777
VR+MGRSA GV G+ L + +V++L++ +Q S+LT TENG+GKRT EY +R
Sbjct: 710 TQVRSMGRSASGVRGVHLLQGDRVVSLIIPKDQ-SSILTVTENGFGKRTNQSEYPLKSRA 768
Query: 778 TKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITV 837
+G+ISIK +RNG VV A V++ +IM++T G L+R RVSE+ + R+TQGV+LI
Sbjct: 769 IQGVISIKVTERNGNVVGAVQVDQGDQIMIVTDSGRLVRIRVSEVNIIKRNTQGVMLIRT 828
Query: 838 ENKSKLCGVQRLCKITMIKK 857
+ G+QR+ + I+K
Sbjct: 829 ACDEHVVGLQRVVESVEIEK 848
>gi|294651105|ref|ZP_06728441.1| DNA topoisomerase (ATP-hydrolyzing) [Acinetobacter haemolyticus
ATCC 19194]
gi|292822999|gb|EFF81866.1| DNA topoisomerase (ATP-hydrolyzing) [Acinetobacter haemolyticus
ATCC 19194]
Length = 910
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/870 (50%), Positives = 601/870 (69%), Gaps = 38/870 (4%)
Query: 7 EVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKC 66
E+ I +E+E+ SYLDYAMSVIV RALPDVRDGLKPVHRRVLFAMHE+ N +N+ + K
Sbjct: 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLFAMHELGNDYNKAYKKS 64
Query: 67 ARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECR 126
ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGS+DGDSAAAMRYTE R
Sbjct: 65 ARVVGDVIGKYHPHGDSAVYETIVRMAQDFSLRYMLVDGQGNFGSVDGDSAAAMRYTEVR 124
Query: 127 LNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHN 186
+ K+++E+L DL+K+T+D+ NYDG E+ P V+PTRIPNLLING++GIAVGMATN+ PHN
Sbjct: 125 MQKLTHEILADLEKDTVDWEDNYDGSERIPQVMPTRIPNLLINGTTGIAVGMATNMAPHN 184
Query: 187 LTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKT 246
+TEV++ L +NP S+ L++ I PDFPT GIIYG S + D Y TGKGR+ IR K
Sbjct: 185 MTEVVNACLAYANNPNISVEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
Query: 247 HIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIE 306
H EE + RT I+ E+PYQVNK +E+I++LVKEKKLE IS LRDESDK GMRI I+
Sbjct: 245 HFEEDQKTGRTTIVFTEIPYQVNKAKTIERIAELVKEKKLEGISELRDESDKEGMRIAID 304
Query: 307 LKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRT 366
LKR E E+V+N L+ TQLQN+F +NM+ L NGQPKL+NLK+I+ FI HR+EV+ RRT
Sbjct: 305 LKRGENAEVVVNNLFLHTQLQNSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
Query: 367 IFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKII-- 424
+FELRKARE HILEGLT+AL NID I+ I++++ P EA+ ++ W V ++
Sbjct: 365 MFELRKARERGHILEGLTVALANIDEIIETIKTSANPAEARERLQAGEWAGGGVVALLEK 424
Query: 425 -GFNKKNYNTISKINNISKLQ-NNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENV 482
G + I + +D+Y+LS Q IL++ L RLT +EQ K+ +Y +
Sbjct: 425 AGAISVRPDEIEGEDPARPFGLTDDVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTEI 484
Query: 483 IKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIASQ 542
+ ++ +LT IL++ ++ +I +EL +I +YG RR+EI+ + ++ EDLI +
Sbjct: 485 LGQIAELTAILNDFNLLMNVIREELALILQQYGDG----RRTEIVESGVDFCREDLIPEE 540
Query: 543 DMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYG 602
+V+T+S GY K+QP+S+Y+AQ+RGGRGK A KD+D I L +A+ H +LCF++ G
Sbjct: 541 QVVLTVSQTGYAKTQPLSDYQAQRRGGRGKSATAMKDDDIIQHLIVASNHATVLCFTDVG 600
Query: 603 RLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLG 662
++Y L+V+++PQ SR ++G+PIIN+ L E +T ILPL+ +FP+N+YVFM+T+ G
Sbjct: 601 KVYRLRVFEVPQASRGAKGRPIINLLPLDANETVTAILPLT----EFPENHYVFMATASG 656
Query: 663 IVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRA 722
VK+ L+ FSN R +G+ A+ L+ ED LIG A+TDG+ IMLFS+ GKA+RF E VRA
Sbjct: 657 TVKRVELAQFSNIRANGLRAIELNEEDTLIGVAITDGNQQIMLFSNEGKAIRFAETDVRA 716
Query: 723 MGRSARGVIGMRLEKKQKV--------------------------IALLVSNNQKQSVLT 756
MGR+A+GV GMR+ V I LV + VL
Sbjct: 717 MGRTAKGVRGMRVTLAAAVDSEDADLDNDDSDDNDDSSDSNVLSRIVSLVVVPETGEVLC 776
Query: 757 ATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIR 816
A+ NGYGKRT + ++ RG KG+I+IKT++RNG++V A ++ E+MLI+ GG L+R
Sbjct: 777 ASANGYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDETKELMLISDGGTLVR 836
Query: 817 TRVSEIRKMGRSTQGVILITVENKSKLCGV 846
TR +E+ GR+ QGV LI + + L GV
Sbjct: 837 TRAAEVAMTGRNAQGVRLIRLSDAETLVGV 866
Score = 48.1 bits (113), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 650 PKNNYVFMSTSLGIVKKTLLSNFSNPRKSG--IIAVNLSNEDF-LIGAALTDGSYDIMLF 706
P+ V +++ G K+T +++F ++ G +IA+ S + L+GA D + ++ML
Sbjct: 769 PETGEVLCASANGYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDETKELMLI 828
Query: 707 SDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALL 745
SD G VR V GR+A+GV +RL + ++ ++
Sbjct: 829 SDGGTLVRTRAAEVAMTGRNAQGVRLIRLSDAETLVGVV 867
>gi|299769083|ref|YP_003731109.1| DNA gyrase subunit A [Acinetobacter oleivorans DR1]
gi|298699171|gb|ADI89736.1| DNA gyrase, A subunit [Acinetobacter oleivorans DR1]
Length = 904
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/875 (50%), Positives = 607/875 (69%), Gaps = 47/875 (5%)
Query: 7 EVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKC 66
E+ I +E+E+ SYLDYAMSVIV RALPDVRDGLKPVHRRVLFAMHE+ N +N+ + K
Sbjct: 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLFAMHELGNDYNKAYKKS 64
Query: 67 ARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECR 126
ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAMRYTE R
Sbjct: 65 ARVVGDVIGKYHPHGDSAVYETIVRMAQDFSLRYLLVDGQGNFGSIDGDSAAAMRYTEVR 124
Query: 127 LNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHN 186
+ K+++ELL DL+K+T+D+ NYDG E+ P VLPTR+PNLLING++GIAVGMATN+ PHN
Sbjct: 125 MTKLAHELLADLEKDTVDWEDNYDGSERIPQVLPTRVPNLLINGAAGIAVGMATNMAPHN 184
Query: 187 LTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKT 246
+TEV++ L NP S+ L++ I PDFPT GIIYG S + D Y TGKGR+ IR K
Sbjct: 185 MTEVVNACLAYADNPNISVEGLMEYITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
Query: 247 HIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIE 306
H EE + RT I+ E+PYQVNK ++E+I++LVKEKKLE IS LRDESDK GMRI I+
Sbjct: 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
Query: 307 LKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRT 366
LKR E E+V+N L+ TQL+N+F +NM+ L NGQPKL+NLK+I+ FI HR+EV+ RRT
Sbjct: 305 LKRGENAEVVVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
Query: 367 IFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGF 426
+FELRKARE HILEGLT+AL NID I+ I++++ P EA+ +++ W V ++
Sbjct: 365 MFELRKARERGHILEGLTVALANIDEIIETIKTSANPAEARERLLAGEWAGGGVISLL-- 422
Query: 427 NKKNYNTISKINNISKLQNND--------MYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ IS + + +N D +Y+LS Q IL++ L RLT +EQ K+ +
Sbjct: 423 --EKAGAISVRPDEIEGENPDRPFGLTESIYRLSPTQVGAILELRLHRLTGLEQDKLHAE 480
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y ++ ++ +LT IL++ ++ +I +EL + +YG RR+EII + I+ S EDL
Sbjct: 481 YTEILGQIAELTAILNDFNLLMAVIREELAQVLQQYGDG----RRTEIIESRIDFSREDL 536
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I + +V+T+S GY K+QP+S+Y+AQ+RGGRGK A KD+D+I L +A+ H +LCF
Sbjct: 537 IPEEQVVLTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDFIQHLIVASNHATVLCF 596
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
+N G++Y L+V+++PQ SR ++G+PI+N+ L E +T ILPL+ +FP+N+YVFM+
Sbjct: 597 TNVGKVYRLRVFEVPQASRGAKGRPIVNLLPLDANETVTAILPLT----EFPENHYVFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VK+ L F+N R +G+ A+ L+ ED LIG A+TDG+ IMLFS+ GKA+RF E
Sbjct: 653 TASGTVKRVDLEQFANIRSNGLRAIELNEEDTLIGVAITDGNQQIMLFSNEGKAIRFAET 712
Query: 719 SVRAMGRSARGVIGMRL--------EKKQKV-------------------IALLVSNNQK 751
VR+MGR+A+GV GMR+ E+ +V I LV +
Sbjct: 713 DVRSMGRTAKGVRGMRVSFASSTLSEEDAEVENDESDDNEDSADLNVVSRIVSLVVVPET 772
Query: 752 QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTG 811
VL A+ NGYGKRT + ++ RG KG+I+IKT++RNG++V A ++ E++LI+ G
Sbjct: 773 GEVLCASANGYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDESKELLLISDG 832
Query: 812 GILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
G L+RTR +E+ GR+ QGV LI + + L GV
Sbjct: 833 GTLVRTRAAEVAMTGRNAQGVRLIRLSEEETLVGV 867
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 21/196 (10%)
Query: 571 GKKAMMTKDEDWINQLFIANTHDYILCFSNYG---RLYWLKVWQIPQGSRNSRGKPIINM 627
G +A+ +ED + + I + + I+ FSN G R V + + ++ RG +
Sbjct: 673 GLRAIELNEEDTLIGVAITDGNQQIMLFSNEGKAIRFAETDVRSMGRTAKGVRGMRVSFA 732
Query: 628 FSLKNKEKITVILPLSNNKRD---------------FPKNNYVFMSTSLGIVKKTLLSNF 672
S ++E V S++ D P+ V +++ G K+T +++F
Sbjct: 733 SSTLSEEDAEVENDESDDNEDSADLNVVSRIVSLVVVPETGEVLCASANGYGKRTPVNDF 792
Query: 673 SNPRKSG--IIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARG 729
++ G +IA+ S + L+GA D S +++L SD G VR V GR+A+G
Sbjct: 793 PTKKRGGKGVIAIKTSERNGELVGAVSIDESKELLLISDGGTLVRTRAAEVAMTGRNAQG 852
Query: 730 VIGMRLEKKQKVIALL 745
V +RL +++ ++ ++
Sbjct: 853 VRLIRLSEEETLVGVV 868
>gi|375135676|ref|YP_004996326.1| DNA gyrase subunit A [Acinetobacter calcoaceticus PHEA-2]
gi|325123121|gb|ADY82644.1| DNA gyrase, subunit A, type II topoisomerase [Acinetobacter
calcoaceticus PHEA-2]
Length = 904
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/875 (50%), Positives = 606/875 (69%), Gaps = 47/875 (5%)
Query: 7 EVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKC 66
E+ I +E+E+ SYLDYAMSVIV RALPDVRDGLKPVHRRVL+AMHE+ N +N+ + K
Sbjct: 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
Query: 67 ARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECR 126
ARVVG+ +GKYHPHGD ++Y+ +VRMAQ FSLR LVDGQGNFGSIDGDSAAAMRYTE R
Sbjct: 65 ARVVGDVIGKYHPHGDSAVYETIVRMAQDFSLRYLLVDGQGNFGSIDGDSAAAMRYTEVR 124
Query: 127 LNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHN 186
+ K+++ELL DL+K+T+D+ NYDG E+ P VLPTR+PNLLING++GIAVGMATN+ PHN
Sbjct: 125 MTKLAHELLADLEKDTVDWEDNYDGSERIPEVLPTRVPNLLINGAAGIAVGMATNMAPHN 184
Query: 187 LTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKT 246
+TEV++ L NP SI L++ I PDFPT GIIYG S + D Y TGKGR+ IR K
Sbjct: 185 MTEVVNACLAYADNPNISIEGLMEYITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
Query: 247 HIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIE 306
H EE + RT I+ E+PYQVNK ++E+I++LVKEKKLE IS LRDESDK GMRI I+
Sbjct: 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKEGMRIAID 304
Query: 307 LKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRT 366
LKR E E+V+N L+ TQL+N+F +NM+ L NGQPKL+NLK+I+ FI HR+EV+ RRT
Sbjct: 305 LKRGENAEVVVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
Query: 367 IFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGF 426
+FELRKARE HILEGLT+AL NID I+ I++++ P EA+ +++ W V ++
Sbjct: 365 MFELRKARERGHILEGLTVALANIDEIIETIKTSANPAEARERLLAGEWADGGVVSLL-- 422
Query: 427 NKKNYNTIS-KINNISKLQNN-------DMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ IS + + I N +Y+LS Q IL++ L RLT +EQ K+ +
Sbjct: 423 --EKAGAISVRPDEIEGEDPNRPFGLTESIYRLSPTQVGAILELRLHRLTGLEQDKLHAE 480
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y ++ ++ +LT IL++ ++ +I +EL ++ +YG RR+EII + I+ S EDL
Sbjct: 481 YTEILGQIAELTAILNDFNLLMAVIREELALVLQQYGDG----RRTEIIESRIDFSREDL 536
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I + +V+T+S GY K+QP+S+Y+AQ+RGGRGK A KD+D+I L +A+ H +LCF
Sbjct: 537 IPEEQVVLTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDFIQHLIVASNHATVLCF 596
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
+N G++Y L+V+++PQ SR ++G+PI+N+ L E +T ILPL+ +FP+N+YVFM+
Sbjct: 597 TNVGKVYRLRVFEVPQASRGAKGRPIVNLLPLDANETVTAILPLT----EFPENHYVFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VK+ L F+N R +G+ A+ L+ ED LIG A+TDG+ IMLFS+ GKA+RF E
Sbjct: 653 TASGTVKRVDLEQFANIRSNGLRAIELNEEDTLIGVAITDGNQQIMLFSNEGKAIRFAET 712
Query: 719 SVRAMGRSARGVIGMRL--------EKKQKV-------------------IALLVSNNQK 751
VRAMGR+A+GV GMR+ E+ V I LV +
Sbjct: 713 DVRAMGRTAKGVRGMRVSFASSTLSEEDADVENDESDDNDDSADSNLVSRIVSLVVVPET 772
Query: 752 QSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTG 811
VL A+ NGYGKRT + ++ RG KG+I+IKT++RNG++V A ++ E++LI+ G
Sbjct: 773 GEVLCASANGYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDETKELLLISDG 832
Query: 812 GILIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
G L+RTR +E+ GR+ QGV LI + + L GV
Sbjct: 833 GTLVRTRAAEVAMTGRNAQGVRLIRLSEEETLVGV 867
Score = 49.3 bits (116), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 92/196 (46%), Gaps = 21/196 (10%)
Query: 571 GKKAMMTKDEDWINQLFIANTHDYILCFSNYG---RLYWLKVWQIPQGSRNSRGKPIINM 627
G +A+ +ED + + I + + I+ FSN G R V + + ++ RG +
Sbjct: 673 GLRAIELNEEDTLIGVAITDGNQQIMLFSNEGKAIRFAETDVRAMGRTAKGVRGMRVSFA 732
Query: 628 FSLKNKEKITVILPLSNNKRD---------------FPKNNYVFMSTSLGIVKKTLLSNF 672
S ++E V S++ D P+ V +++ G K+T +++F
Sbjct: 733 SSTLSEEDADVENDESDDNDDSADSNLVSRIVSLVVVPETGEVLCASANGYGKRTPVNDF 792
Query: 673 SNPRKSG--IIAVNLSNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARG 729
++ G +IA+ S + L+GA D + +++L SD G VR V GR+A+G
Sbjct: 793 PTKKRGGKGVIAIKTSERNGELVGAVSIDETKELLLISDGGTLVRTRAAEVAMTGRNAQG 852
Query: 730 VIGMRLEKKQKVIALL 745
V +RL +++ ++ ++
Sbjct: 853 VRLIRLSEEETLVGVV 868
>gi|440731227|ref|ZP_20911265.1| DNA gyrase subunit A [Xanthomonas translucens DAR61454]
gi|440374455|gb|ELQ11185.1| DNA gyrase subunit A [Xanthomonas translucens DAR61454]
Length = 940
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/941 (48%), Positives = 637/941 (67%), Gaps = 88/941 (9%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+ N
Sbjct: 1 MAESAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYYKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYLLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLTHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ NP+ ++ L++ IP PDFPTAGI+ G S + GY TG+GRV
Sbjct: 181 NIPPHNLTETINACIALIDNPQIDVDGLMEYIPGPDFPTAGIVNGTSGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E R AI+++E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RMRAKAEI-EIQDNGREAIVVNEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E ++VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L F+ HR+E
Sbjct: 300 MRIYIEIKRGEAADVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AHILEGLT+AL NID I++I++++ P EA+ +++ W D
Sbjct: 360 VVTRRTIFELRKARARAHILEGLTVALANIDEMIELIKTSANPTEARERMLAKRW---DA 416
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ S+ ++ D Y+L+++QA +IL+M L RLT +EQ+++ +
Sbjct: 417 GLVGALLGAAGADASQPEDLPAGVGLLADGYQLTEVQATQILEMRLHRLTGLEQERLTEE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTED 537
Y+ ++ + L IL N ++++I +EL I+ +YG ++ IR SE L+ + D
Sbjct: 477 YKQLLDAIAGLIRILENPDVLLQLIREELLSIREEYGDARRTEIRHSEEDLDIL-----D 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L
Sbjct: 532 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLT 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F++ G+++ L V+Q+P+ N+RG+PIIN L+N E++ +LP+ RD+ YVF
Sbjct: 592 FTSSGKVFALPVYQLPEAGPNARGRPIINWIPLENGERVQAVLPV----RDYAGGRYVFF 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G+VKKT LS+F+ RK+G IA+NL D L+G ALTDG D++LF+ +GK VRF+E
Sbjct: 648 ATRNGMVKKTPLSDFAFQRKAGKIAINLDEGDALVGVALTDGERDVLLFASNGKTVRFSE 707
Query: 718 -----------------------------------------NSVRAMGRSARGVIGMRLE 736
V+ GRS+RGV G+RL
Sbjct: 708 RPKDDEAEDGAIEEGAGDDDVVLAEAVEDGDDARSPRRKSRGGVKPTGRSSRGVRGIRLA 767
Query: 737 KKQKVIALLVS------------------------------NNQKQSVLTATENGYGKRT 766
+ + V++L+V+ + +LTATENGYGKRT
Sbjct: 768 RSEYVVSLIVAEPAEGQDEDAEDVEPALEVDADAEVVVRNGDEPDAYILTATENGYGKRT 827
Query: 767 LIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMG 826
+ EY + RGT+G+I I+T++RNGK+V A L++ E++LI+ GG L+RTR SEI ++G
Sbjct: 828 PLAEYPRKGRGTQGVIGIQTSERNGKLVGAVLLSTRDEVLLISDGGTLVRTRASEISRVG 887
Query: 827 RSTQGVILITVENKSKLCGVQRL-CKITMIKKYIPVITIDG 866
R+TQGV LI + KL V+RL + + P++ DG
Sbjct: 888 RNTQGVTLIRLSKGEKLQAVERLDGSLVEEEPAEPIVGEDG 928
>gi|433675900|ref|ZP_20508079.1| DNA gyrase subunit A [Xanthomonas translucens pv. translucens DSM
18974]
gi|430818984|emb|CCP38326.1| DNA gyrase subunit A [Xanthomonas translucens pv. translucens DSM
18974]
Length = 940
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/941 (48%), Positives = 637/941 (67%), Gaps = 88/941 (9%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M + AKE+I + LE+EM KSYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+E+ N
Sbjct: 1 MAESAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELGAHSN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+P+ K AR+VG+ +GKYHPHGD S+YD LVRMAQ FSLR LVDGQGNFGS+DGDSAAAM
Sbjct: 61 KPYYKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYLLVDGQGNFGSVDGDSAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++++++EL+ D+DKET+DF NYD KE EP+V+PTR PNLL+NGS+GIAVGMAT
Sbjct: 121 RYTEARMSRLTHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNLTE I+ + ++ NP+ ++ L++ IP PDFPTAGI+ G S + GY TG+GRV
Sbjct: 181 NIPPHNLTETINACIALIDNPQIDVDGLMEYIPGPDFPTAGIVNGTSGIVAGYRTGRGRV 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
+RAK I E R AI+++E+PYQVNK L+EKI++LVKEKKLE IS LRDESDK G
Sbjct: 241 RMRAKAEI-EIQDNGREAIVVNEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG 299
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRI IE+KR E ++VLN LY+QTQ+++ FG+NM+ALV+G+P+L+NLK++L F+ HR+E
Sbjct: 300 MRIYIEIKRGEAADVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRRE 359
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
V+ RRTIFELRKAR AHILEGLT+AL NID I++I++++ P EA+ +++ W D
Sbjct: 360 VVTRRTIFELRKARARAHILEGLTVALANIDEMIELIKTSANPTEARERMLAKRW---DA 416
Query: 421 SKIIGFNKKNYNTISKINNISKLQN--NDMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ S+ ++ D Y+L+++QA +IL+M L RLT +EQ+++ +
Sbjct: 417 GLVGALLGAAGADASQPEDLPAGVGLLADGYQLTEVQATQILEMRLHRLTGLEQERLTEE 476
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKN-IRRSEIILNAINPSTED 537
Y+ ++ + L IL N ++++I +EL I+ +YG ++ IR SE L+ + D
Sbjct: 477 YKQLLDAIAGLIRILENPDVLLQLIREELISIREEYGDARRTEIRHSEEDLDIL-----D 531
Query: 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILC 597
LIA +D+V+TLS+ GY K QP+S YRAQ+RGGRG+ A TK+ED+I+QL++ NTHD +L
Sbjct: 532 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLT 591
Query: 598 FSNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFM 657
F++ G+++ L V+Q+P+ N+RG+PIIN L+N E++ +LP+ RD+ YVF
Sbjct: 592 FTSSGKVFALPVYQLPEAGPNARGRPIINWIPLENGERVQAVLPV----RDYAGGRYVFF 647
Query: 658 STSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717
+T G+VKKT LS+F+ RK+G IA+NL D L+G ALTDG D++LF+ +GK VRF+E
Sbjct: 648 ATRNGMVKKTPLSDFAFQRKAGKIAINLDEGDALVGVALTDGERDVLLFASNGKTVRFSE 707
Query: 718 -----------------------------------------NSVRAMGRSARGVIGMRLE 736
V+ GRS+RGV G+RL
Sbjct: 708 RPKDDEAEDGAIEEGAGDDDVVLAEAVEDGDDARSPRRKSRGGVKPTGRSSRGVRGIRLA 767
Query: 737 KKQKVIALLVS------------------------------NNQKQSVLTATENGYGKRT 766
+ + V++L+V+ + +LTATENGYGKRT
Sbjct: 768 RSEYVVSLIVAEPAEGQDEDAEDVEPALEVDADAEVVVRNGDEPDAYILTATENGYGKRT 827
Query: 767 LIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMG 826
+ EY + RGT+G+I I+T++RNGK+V A L++ E++LI+ GG L+RTR SEI ++G
Sbjct: 828 PLAEYPRKGRGTQGVIGIQTSERNGKLVGAVLLSTRDEVLLISDGGTLVRTRASEISRVG 887
Query: 827 RSTQGVILITVENKSKLCGVQRL-CKITMIKKYIPVITIDG 866
R+TQGV LI + KL V+RL + + P++ DG
Sbjct: 888 RNTQGVTLIRLSKGEKLQAVERLDGSLVEEEPAEPIVGEDG 928
>gi|406041137|ref|ZP_11048492.1| DNA gyrase subunit A [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 903
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/873 (50%), Positives = 602/873 (68%), Gaps = 45/873 (5%)
Query: 7 EVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKC 66
E+ I +E+E+ SYLDYAMSVIV RALPDVRDGLKPVHRRVL+AMHE+ N +N+ + K
Sbjct: 5 EIRPIAIEDELKNSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
Query: 67 ARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAMRYTECR 126
ARVVG+ +GKYHPHGD ++YD +VRMAQ FSLR LVDGQGNFGS+DGDSAAAMRYTE R
Sbjct: 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
Query: 127 LNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHN 186
+ K+++ELL DL+K+T+D++ NYDG E+ P VLPTR+PNLL+NG++GIAVGMATN+ PHN
Sbjct: 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRVPNLLVNGAAGIAVGMATNMAPHN 184
Query: 187 LTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKT 246
LTEVI L NP SI L++ I PDFPT GIIYG S + D Y TGKGR+ IR K
Sbjct: 185 LTEVIHACLAYADNPNISIEGLMEHISGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
Query: 247 HIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIE 306
H EE + NRT I+ E+PYQVNK ++E+I++LVKEKKLE IS LRDESDK GMRI I+
Sbjct: 245 HFEEDEKTNRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
Query: 307 LKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKEVIKRRT 366
LKR E E+++N L+ TQL+N+F +NM+ L NGQPKL+NLK+I+ FI HR+EV+ RRT
Sbjct: 305 LKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
Query: 367 IFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGF 426
+FELRKARE HILEGLT+AL NID I+ I++++ P EA+ ++ W V+ ++
Sbjct: 365 MFELRKARERGHILEGLTVALANIDEIIETIKTSANPAEARERLQAGEWAGGGVTALL-- 422
Query: 427 NKKNYNTIS-KINNISKLQNN-------DMYKLSDIQAQEILKMPLQRLTNMEQKKIINK 478
+ IS + + I N D+Y+LS Q IL++ L RLT +EQ K+ +
Sbjct: 423 --EKAGAISVRPDEIEGEDPNRPFGLSGDIYRLSPTQVAAILELRLHRLTGLEQDKLHAE 480
Query: 479 YENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDL 538
Y ++ ++ +LT IL++ ++ +I +EL I +YG + RR++II + I+ EDL
Sbjct: 481 YTEILGQIAELTAILNDFNLLMGVIREELAQILQQYG----DARRTDIIESRIDFCREDL 536
Query: 539 IASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCF 598
I + +V+T+S GY K+QP+S+Y+AQ+RGGRGK A KD+D I L +A+ H +LCF
Sbjct: 537 IPEEQVVLTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLVVASNHATVLCF 596
Query: 599 SNYGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMS 658
+N G++Y LKV+++PQ SR ++G+P++N+ L E IT ILPL+ +F +N+YVFM+
Sbjct: 597 TNVGKVYRLKVFEVPQASRGAKGRPMVNLLPLDANETITAILPLT----EFLENHYVFMA 652
Query: 659 TSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNEN 718
T+ G VK+ L F+N R +G+ A+ L+ ED LIG A+TDG IMLFS+ GKA+RF E
Sbjct: 653 TASGTVKRVELEQFANIRANGLRAIELNEEDTLIGVAITDGKQQIMLFSNEGKAIRFAET 712
Query: 719 SVRAMGRSARGVIGMRLEKKQKV-------------------------IALLVSNNQKQS 753
VRAMGR+A+GV GMR+ + I LV +
Sbjct: 713 DVRAMGRTAKGVRGMRVALAATLDSEDADVENDDSDESDDSDSNVVSRIVSLVVVPETGE 772
Query: 754 VLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGI 813
VL A+ NGYGKRT + ++ RG KG+I+IKT++RNG++V A ++ E+MLI+ GG
Sbjct: 773 VLCASANGYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDESKELMLISDGGT 832
Query: 814 LIRTRVSEIRKMGRSTQGVILITVENKSKLCGV 846
L+RTR +E+ GR+ QGV LI + + L GV
Sbjct: 833 LVRTRAAEVAMTGRNAQGVRLIRLSDDETLVGV 865
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 31/241 (12%)
Query: 528 LNAINPSTEDLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLF 587
+ AI P TE L V + G +K + ++ A R G +A+ +ED + +
Sbjct: 634 ITAILPLTEFL--ENHYVFMATASGTVKRVELEQF-ANIRAN-GLRAIELNEEDTLIGVA 689
Query: 588 IANTHDYILCFSNYG---RLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEK--------- 635
I + I+ FSN G R V + + ++ RG + +L +++
Sbjct: 690 ITDGKQQIMLFSNEGKAIRFAETDVRAMGRTAKGVRGMRVALAATLDSEDADVENDDSDE 749
Query: 636 --------ITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSG--IIAVNL 685
++ I+ L P+ V +++ G K+T +++F ++ G +IA+
Sbjct: 750 SDDSDSNVVSRIVSLVV----VPETGEVLCASANGYGKRTPVNDFPTKKRGGKGVIAIKT 805
Query: 686 SNEDF-LIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIAL 744
S + L+GA D S ++ML SD G VR V GR+A+GV +RL + ++ +
Sbjct: 806 SERNGELVGAVSIDESKELMLISDGGTLVRTRAAEVAMTGRNAQGVRLIRLSDDETLVGV 865
Query: 745 L 745
+
Sbjct: 866 V 866
>gi|21672462|ref|NP_660529.1| DNA gyrase subunit A [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25008529|sp|Q8K9W2.1|GYRA_BUCAP RecName: Full=DNA gyrase subunit A
gi|21623077|gb|AAM67740.1| DNA gyrase subunit A [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 825
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/851 (52%), Positives = 616/851 (72%), Gaps = 28/851 (3%)
Query: 1 MNQFAKEVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWN 60
M A+E++ + +E+E+ SYLDYAMSVIVGRALPDVRDGLKPVHRR+LFAMH ++N WN
Sbjct: 1 MKHLAREIVQVDIEKELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRILFAMHVLSNYWN 60
Query: 61 RPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNFGSIDGDSAAAM 120
+ + K ARVVG+ +GKYHPHGD ++YD++VRMAQ+FSLR L+DGQGNFGSIDGD+AAAM
Sbjct: 61 KAYKKSARVVGDVIGKYHPHGDSAVYDSIVRMAQNFSLRYMLIDGQGNFGSIDGDAAAAM 120
Query: 121 RYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT 180
RYTE R++KIS ELL DL+K T++FI NYDG E P +LP++IPNLLINGSSGIAVGMAT
Sbjct: 121 RYTEVRMSKISQELLADLEKNTVEFIPNYDGTEHIPEILPSKIPNLLINGSSGIAVGMAT 180
Query: 181 NIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRV 240
NIPPHNL EVIDG L + + ++ +LI+ IP PDFPTAGII G + + Y TGKG++
Sbjct: 181 NIPPHNLNEVIDGCLAYIKDDNITLRELIQHIPGPDFPTAGIINGKKGIEEAYRTGKGKI 240
Query: 241 IIRAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVKEKKLECISNLRDESDKSG 300
IRA+ IE+ + + +II E+PYQVNK L+EKI++LVKEK+++ I+ LRDESDK G
Sbjct: 241 YIRARNKIEKNKKNKKESIIFYEIPYQVNKSRLIEKIAELVKEKRIDGITALRDESDKDG 300
Query: 301 MRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKEILYYFILHRKE 360
MRIV+E+K+ + EI+LN+LY TQLQ +FG+NM+AL GQPK L+LKEIL +F+ HR+E
Sbjct: 301 MRIVVEIKKEAMSEIILNQLYSLTQLQISFGINMVALCQGQPKTLSLKEILKHFLSHREE 360
Query: 361 VIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDV 420
++ RR+IFEL K + +HILEGL+IAL NI+ I +I+ + EAK II+ TW +
Sbjct: 361 IVTRRSIFELDKTCKRSHILEGLSIALININCIIDLIKKAKSSLEAKELIIKKTWIYKNS 420
Query: 421 SKIIGFNKKNYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYE 480
KI N+K+++ Y ++ Q Q IL + L +LT++E+ K++ +Y+
Sbjct: 421 EKI---NQKDHD----------------YHFTEEQVQAILDLRLHKLTSLEKNKLVLEYD 461
Query: 481 NVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGSHKKNIRRSEIILNAINPSTEDLIA 540
+ KK+ +L IL + R+ E+I DEL IKN +G RR+EI N + S EDLI
Sbjct: 462 CLTKKIKELKKILKSRDRMREVIRDELVSIKNNFGDQ----RRTEITENNPDISIEDLIN 517
Query: 541 SQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSN 600
+D+V+TLS+ GY+K QP+S+Y AQKRGG+GK A K+ED+I L + NTHD ILCFS+
Sbjct: 518 QEDVVVTLSHSGYVKYQPLSDYNAQKRGGKGKSAAKIKEEDFIESLVVTNTHDTILCFSS 577
Query: 601 YGRLYWLKVWQIPQGSRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTS 660
G LYW+KV+Q+P+ SR+++G+PI+N+ L NKE+IT ILP+ +F N +FM+T+
Sbjct: 578 RGILYWMKVYQLPESSRHAKGRPIVNLLPLSNKERITAILPI----HEFKDNLNIFMATA 633
Query: 661 LGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSV 720
GIVKK+ L F PR +GIIA+NL D LIG +LT+G +IMLF+ +GK V+F ENSV
Sbjct: 634 QGIVKKSSLKEFKKPRIAGIIAINLRANDELIGVSLTNGKNNIMLFTQNGKVVQFLENSV 693
Query: 721 RAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKG 780
R MGR+A GV G+++ K KV++L+V +K+S+L AT NGYGKRT I ++ +R T+G
Sbjct: 694 RTMGRTASGVRGIKISKNDKVVSLIVP-YKKESILIATNNGYGKRTKITDFPIKSRATQG 752
Query: 781 IISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENK 840
+ISIK K+NGK++ A V +IM+IT G L+R R SEI + R+TQGVILI
Sbjct: 753 VISIKITKKNGKIIGAIQVVEKDQIMMITNAGTLVRIRASEIGVLKRNTQGVILIRTSKN 812
Query: 841 SKLCGVQRLCK 851
K+ +QR+ +
Sbjct: 813 EKVVALQRIVE 823
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,342,456,665
Number of Sequences: 23463169
Number of extensions: 1062672678
Number of successful extensions: 3357381
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 20980
Number of HSP's successfully gapped in prelim test: 8676
Number of HSP's that attempted gapping in prelim test: 3155749
Number of HSP's gapped (non-prelim): 75946
length of query: 1619
length of database: 8,064,228,071
effective HSP length: 157
effective length of query: 1462
effective length of database: 8,675,477,834
effective search space: 12683548593308
effective search space used: 12683548593308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 84 (37.0 bits)