Query psy14505
Match_columns 1619
No_of_seqs 821 out of 6319
Neff 7.4
Searched_HMMs 13730
Date Fri Aug 16 21:37:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14505.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14505hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ab4a_ e.11.1.1 (A:) DNA Gyra 100.0 6E-135 5E-139 1255.3 40.0 492 30-526 1-492 (493)
2 d1bjta_ e.11.1.1 (A:) DNA topo 100.0 4.4E-99 3E-103 971.2 21.5 480 7-516 248-750 (760)
3 d1suua_ b.68.10.1 (A:) DNA gyr 100.0 3.3E-51 2.4E-55 479.3 35.1 301 542-848 1-302 (304)
4 d1wp5a_ b.68.10.1 (A:) Topoiso 100.0 2.5E-51 1.8E-55 483.5 34.1 306 538-852 1-308 (323)
5 d1wp5a_ b.68.10.1 (A:) Topoiso 100.0 3.4E-32 2.5E-36 319.6 22.6 218 649-877 2-224 (323)
6 d1suua_ b.68.10.1 (A:) DNA gyr 100.0 2.6E-31 1.9E-35 310.0 22.9 217 652-878 1-224 (304)
7 d1q3ta_ c.37.1.1 (A:) CMP kina 99.9 1.8E-26 1.3E-30 257.4 20.4 214 860-1073 4-222 (223)
8 d1x75a1 e.11.1.1 (A:363-494) D 99.9 5.6E-27 4.1E-31 234.6 13.4 132 363-495 1-132 (132)
9 d1ckea_ c.37.1.1 (A:) CMP kina 99.7 1.6E-16 1.2E-20 175.6 18.1 216 860-1075 4-223 (225)
10 d1sroa_ b.40.4.5 (A:) S1 RNA-b 99.5 1.2E-14 9.1E-19 131.8 6.6 74 1426-1501 3-76 (76)
11 d1kl9a2 b.40.4.5 (A:3-88) Euka 99.5 4.7E-14 3.4E-18 131.4 9.9 77 1423-1500 7-86 (86)
12 d1sroa_ b.40.4.5 (A:) S1 RNA-b 99.5 1.4E-14 1E-18 131.4 6.1 75 1338-1414 2-76 (76)
13 d3bzka4 b.40.4.5 (A:637-730) T 99.5 4.5E-14 3.2E-18 133.7 9.2 85 1418-1505 9-93 (94)
14 d3bzka4 b.40.4.5 (A:637-730) T 99.4 8.5E-14 6.2E-18 131.7 7.6 82 1335-1418 12-93 (94)
15 d2ahob2 b.40.4.5 (B:1-84) Euka 99.4 9.3E-14 6.8E-18 128.8 7.5 73 1427-1500 10-84 (84)
16 d1kl9a2 b.40.4.5 (A:3-88) Euka 99.4 2.9E-13 2.1E-17 126.0 9.8 73 1340-1413 12-86 (86)
17 d2ahob2 b.40.4.5 (B:1-84) Euka 99.4 3.5E-13 2.5E-17 124.9 7.6 74 1339-1413 9-84 (84)
18 d2ba0a1 b.40.4.5 (A:53-135) S1 99.3 9.2E-13 6.7E-17 121.7 9.3 77 1427-1504 4-80 (83)
19 d2ba0a1 b.40.4.5 (A:53-135) S1 99.3 2.6E-12 1.9E-16 118.7 8.5 78 1339-1417 3-80 (83)
20 d1wi5a_ b.40.4.5 (A:) S1-domai 99.2 2.6E-12 1.9E-16 126.7 6.4 80 1425-1504 18-98 (119)
21 d1wi5a_ b.40.4.5 (A:) S1-domai 99.2 4.2E-12 3.1E-16 125.2 6.8 83 1336-1418 16-99 (119)
22 d1go3e1 b.40.4.5 (E:79-184) C- 99.2 7.5E-12 5.5E-16 120.7 8.1 83 1427-1510 2-99 (106)
23 d1go3e1 b.40.4.5 (E:79-184) C- 99.2 1.4E-11 1E-15 118.7 6.8 85 1340-1425 2-101 (106)
24 d2je6i1 b.40.4.5 (I:66-152) S1 99.1 1.9E-11 1.4E-15 113.7 7.0 74 1427-1501 6-81 (87)
25 d2je6i1 b.40.4.5 (I:66-152) S1 99.1 5E-11 3.7E-15 110.8 7.6 75 1339-1414 5-81 (87)
26 d2z0sa1 b.40.4.5 (A:60-147) S1 99.1 4.9E-11 3.6E-15 111.2 6.7 74 1427-1501 6-82 (88)
27 d2z0sa1 b.40.4.5 (A:60-147) S1 99.0 1E-10 7.5E-15 108.9 7.4 75 1339-1414 5-82 (88)
28 d1e3pa2 b.40.4.5 (A:656-717) S 99.0 8.3E-12 6E-16 107.8 -2.4 59 1434-1492 1-62 (62)
29 d1e3pa2 b.40.4.5 (A:656-717) S 98.9 3.3E-11 2.4E-15 103.9 -2.9 59 1347-1405 1-62 (62)
30 d1viaa_ c.37.1.2 (A:) Shikimat 98.9 2.7E-09 2E-13 111.0 11.1 156 862-1071 3-161 (161)
31 d2nn6h1 b.40.4.5 (H:73-167) S1 98.8 2.7E-09 2E-13 100.3 6.1 74 1427-1501 7-89 (95)
32 d2nn6h1 b.40.4.5 (H:73-167) S1 98.7 2.5E-09 1.9E-13 100.5 4.3 75 1339-1414 6-89 (95)
33 d2ix0a3 b.40.4.5 (A:558-644) E 98.7 1.2E-08 9E-13 93.7 8.4 69 1428-1496 3-83 (87)
34 d2ix0a3 b.40.4.5 (A:558-644) E 98.6 5.7E-08 4.1E-12 89.2 8.6 69 1341-1409 3-83 (87)
35 d1y14b1 b.40.4.5 (B:81-171) C- 98.5 2.1E-07 1.5E-11 86.6 9.2 67 1428-1496 3-79 (91)
36 d1knqa_ c.37.1.17 (A:) Glucona 98.4 1.3E-06 9.8E-11 90.3 15.3 160 860-1072 7-171 (171)
37 d1teva_ c.37.1.1 (A:) UMP/CMP 98.4 2.1E-07 1.5E-11 99.1 8.9 178 860-1071 2-191 (194)
38 d2iyva1 c.37.1.2 (A:2-166) Shi 98.3 2E-07 1.4E-11 96.8 6.0 147 866-1069 8-164 (165)
39 d1y14b1 b.40.4.5 (B:81-171) C- 98.3 9.7E-07 7E-11 82.0 9.8 67 1256-1322 3-79 (91)
40 d2c35b1 b.40.4.5 (B:78-171) C- 98.3 7.2E-07 5.2E-11 83.4 8.8 68 1428-1496 4-82 (94)
41 d1ukza_ c.37.1.1 (A:) Uridylat 98.3 1.1E-06 8.1E-11 93.6 11.0 175 858-1073 7-195 (196)
42 d1qf9a_ c.37.1.1 (A:) UMP/CMP 98.2 1.6E-06 1.1E-10 92.2 10.3 174 859-1072 6-191 (194)
43 d2c35b1 b.40.4.5 (B:78-171) C- 98.2 3.2E-06 2.3E-10 78.8 10.1 67 1256-1322 4-82 (94)
44 d1e6ca_ c.37.1.2 (A:) Shikimat 98.2 1.2E-06 8.8E-11 91.2 8.0 151 864-1071 7-169 (170)
45 d2nn6g1 b.40.4.5 (G:107-194) S 98.2 1.7E-06 1.3E-10 79.2 7.9 73 1339-1414 4-76 (88)
46 d1ak2a1 c.37.1.1 (A:14-146,A:1 98.1 9.8E-07 7.2E-11 93.5 7.0 171 861-1072 5-187 (190)
47 d2nn6g1 b.40.4.5 (G:107-194) S 98.1 2.4E-06 1.7E-10 78.3 8.0 72 1427-1501 5-76 (88)
48 d1y63a_ c.37.1.1 (A:) Probable 98.1 2.2E-06 1.6E-10 88.9 8.5 159 858-1070 4-167 (174)
49 d1rkba_ c.37.1.1 (A:) Adenylat 98.0 3.5E-06 2.5E-10 87.0 8.2 35 861-895 6-40 (173)
50 d1hh2p1 b.40.4.5 (P:127-198) S 98.0 1.2E-05 8.4E-10 70.5 10.0 63 1255-1323 7-71 (72)
51 d1qhxa_ c.37.1.3 (A:) Chloramp 98.0 4.7E-06 3.4E-10 86.2 8.9 31 860-890 4-34 (178)
52 d1uj2a_ c.37.1.6 (A:) Uridine- 98.0 4.8E-06 3.5E-10 89.8 9.0 99 973-1075 111-212 (213)
53 d1jjva_ c.37.1.1 (A:) Dephosph 98.0 2.8E-06 2E-10 91.3 6.6 186 860-1073 3-193 (205)
54 d1zp6a1 c.37.1.25 (A:6-181) Hy 98.0 5.6E-06 4E-10 85.7 8.4 158 860-1072 5-170 (176)
55 d1uf9a_ c.37.1.1 (A:) Dephosph 97.9 6.5E-06 4.8E-10 87.0 8.6 180 860-1072 4-188 (191)
56 d1zaka1 c.37.1.1 (A:3-127,A:15 97.9 1E-05 7.4E-10 85.4 9.5 169 860-1076 4-181 (189)
57 d1kaga_ c.37.1.2 (A:) Shikimat 97.9 5.2E-07 3.8E-11 92.3 -1.3 70 992-1070 96-168 (169)
58 d1khta_ c.37.1.1 (A:) Adenylat 97.9 1E-05 7.3E-10 84.4 8.8 170 860-1071 2-190 (190)
59 d1zina1 c.37.1.1 (A:1-125,A:16 97.9 7.6E-06 5.5E-10 85.6 7.7 168 861-1074 2-181 (182)
60 d2ak3a1 c.37.1.1 (A:0-124,A:16 97.9 3.2E-05 2.3E-09 81.6 12.2 173 858-1079 5-183 (189)
61 d2bdta1 c.37.1.25 (A:1-176) Hy 97.9 1.4E-05 1.1E-09 82.0 9.2 35 861-895 4-38 (176)
62 d2ja9a1 b.40.4.5 (A:62-151) S1 97.8 1.7E-05 1.2E-09 72.8 7.9 73 1427-1501 6-78 (90)
63 d1hh2p1 b.40.4.5 (P:127-198) S 97.8 5.2E-05 3.8E-09 66.2 10.3 59 1427-1493 7-65 (72)
64 d1vhta_ c.37.1.1 (A:) Dephosph 97.8 4.5E-06 3.3E-10 89.8 3.8 188 860-1075 4-196 (208)
65 d3adka_ c.37.1.1 (A:) Adenylat 97.8 1.4E-05 1E-09 84.7 7.3 174 860-1072 9-192 (194)
66 d2ja9a1 b.40.4.5 (A:62-151) S1 97.7 2.8E-05 2E-09 71.3 7.5 73 1339-1413 5-77 (90)
67 d1e4va1 c.37.1.1 (A:1-121,A:15 97.7 2.4E-05 1.8E-09 81.6 8.2 36 861-896 2-37 (179)
68 d1s3ga1 c.37.1.1 (A:1-125,A:16 97.7 0.00012 8.7E-09 76.4 12.8 36 861-896 2-37 (182)
69 d1nksa_ c.37.1.1 (A:) Adenylat 97.6 4.2E-05 3.1E-09 79.8 8.7 172 860-1070 2-193 (194)
70 d1m7ga_ c.37.1.4 (A:) Adenosin 97.6 4E-05 2.9E-09 82.1 8.3 169 858-1072 23-201 (208)
71 d2cdna1 c.37.1.1 (A:1-181) Ade 97.6 8.2E-05 6E-09 77.6 10.2 36 861-896 2-37 (181)
72 d2asba1 b.40.4.5 (A:108-183) S 97.2 0.00031 2.2E-08 61.8 7.3 65 1084-1151 3-76 (76)
73 d1akya1 c.37.1.1 (A:3-130,A:16 97.2 0.00043 3.1E-08 71.9 9.5 36 861-896 4-39 (180)
74 d2asba1 b.40.4.5 (A:108-183) S 97.2 0.00046 3.4E-08 60.6 7.9 63 1255-1323 3-75 (76)
75 d2nn6i1 b.40.4.5 (I:61-185) Ex 97.1 0.00045 3.3E-08 67.1 8.3 74 1427-1500 6-88 (125)
76 d1x6va3 c.37.1.4 (A:34-228) Ad 97.1 0.00011 7.7E-09 77.1 4.0 36 860-895 20-55 (195)
77 d2nn6i1 b.40.4.5 (I:61-185) Ex 97.1 0.00053 3.8E-08 66.6 8.2 75 1339-1413 5-88 (125)
78 d1m8pa3 c.37.1.15 (A:391-573) 97.0 0.00072 5.3E-08 69.2 9.1 33 858-890 5-37 (183)
79 d1p5zb_ c.37.1.1 (B:) Deoxycyt 96.7 0.0014 1E-07 70.7 9.0 85 989-1075 151-239 (241)
80 d1tmka_ c.37.1.1 (A:) Thymidyl 96.7 0.0013 9.7E-08 70.2 8.5 90 989-1083 122-211 (214)
81 d1a7ja_ c.37.1.6 (A:) Phosphor 95.8 0.0052 3.8E-07 67.9 7.0 73 974-1049 125-203 (288)
82 d4tmka_ c.37.1.1 (A:) Thymidyl 95.6 0.013 9.7E-07 61.7 9.5 80 989-1076 130-209 (210)
83 d1smxa_ b.40.4.5 (A:) S1-domai 95.5 0.015 1.1E-06 52.1 7.8 72 1343-1414 2-83 (87)
84 d1nn5a_ c.37.1.1 (A:) Thymidyl 95.2 0.038 2.8E-06 58.2 11.4 79 988-1077 121-199 (209)
85 d1ly1a_ c.37.1.1 (A:) Polynucl 94.8 0.012 9.1E-07 58.1 5.6 37 861-897 4-41 (152)
86 d1smxa_ b.40.4.5 (A:) S1-domai 94.2 0.042 3.1E-06 49.1 7.1 70 1430-1499 2-81 (87)
87 d2ocpa1 c.37.1.1 (A:37-277) De 92.9 0.092 6.7E-06 56.0 8.4 34 860-893 3-36 (241)
88 d1gsia_ c.37.1.1 (A:) Thymidyl 92.1 0.19 1.4E-05 52.0 9.5 24 860-883 1-24 (208)
89 d1tbga_ b.69.4.1 (A:) beta1-su 89.6 14 0.001 38.6 30.7 295 471-821 3-301 (340)
90 d1lvga_ c.37.1.1 (A:) Guanylat 89.0 0.82 6E-05 46.5 10.9 71 992-1075 113-186 (190)
91 d1rz3a_ c.37.1.6 (A:) Hypothet 88.3 0.16 1.1E-05 51.8 4.5 28 859-886 22-49 (198)
92 d1sq5a_ c.37.1.6 (A:) Pantothe 87.9 0.43 3.2E-05 52.7 8.2 37 859-895 80-123 (308)
93 d1znwa1 c.37.1.1 (A:20-201) Gu 83.7 0.18 1.3E-05 51.3 1.9 28 860-887 3-31 (182)
94 d1gkya_ c.37.1.1 (A:) Guanylat 83.7 1.2 9.1E-05 44.9 8.7 88 972-1071 91-183 (186)
95 d1deka_ c.37.1.1 (A:) Deoxynuc 82.8 0.33 2.4E-05 51.4 3.8 39 860-898 2-41 (241)
96 d1jjga_ b.40.4.5 (A:) Viral st 79.7 1.6 0.00011 38.0 6.1 61 1253-1315 29-93 (102)
97 d1lw7a2 c.37.1.1 (A:220-411) T 77.8 0.42 3.1E-05 47.5 2.4 34 859-892 7-40 (192)
98 d3d31a1 b.40.6.3 (A:230-348) S 77.6 16 0.0012 32.9 13.8 104 1258-1397 3-110 (119)
99 d1yj5a2 c.37.1.1 (A:351-522) 5 77.4 7.1 0.00051 38.5 11.8 35 860-894 15-49 (172)
100 d1luza_ b.40.4.5 (A:) Viral st 76.0 2.4 0.00017 36.0 6.1 71 1255-1327 7-81 (85)
101 d1gxra_ b.69.4.1 (A:) Groucho/ 74.4 56 0.0041 34.2 30.0 230 537-818 104-334 (337)
102 d1nr0a1 b.69.4.1 (A:2-312) Act 70.1 69 0.005 33.4 23.6 241 538-819 66-310 (311)
103 d1wfqa_ b.40.4.5 (A:) Cold sho 69.5 11 0.00079 33.0 9.4 70 1512-1582 12-81 (89)
104 d1luza_ b.40.4.5 (A:) Viral st 66.9 11 0.00079 31.9 8.1 70 1512-1583 5-80 (85)
105 d2axpa1 c.37.1.1 (A:2-165) Hyp 66.3 12 0.00085 33.2 8.8 33 862-895 3-35 (164)
106 d1k3ra1 b.40.4.10 (A:93-163) H 64.6 8.3 0.00061 31.8 6.8 48 1253-1313 7-55 (71)
107 d1k3ra1 b.40.4.10 (A:93-163) H 63.6 7.7 0.00056 32.0 6.4 49 1338-1400 7-55 (71)
108 d1s96a_ c.37.1.1 (A:) Guanylat 63.3 23 0.0017 35.6 12.2 170 860-1071 3-182 (205)
109 d1jjga_ b.40.4.5 (A:) Viral st 61.8 12 0.00086 32.4 7.6 61 1510-1572 27-93 (102)
110 d1wfqa_ b.40.4.5 (A:) Cold sho 53.6 31 0.0023 29.9 9.4 67 1339-1412 13-81 (89)
111 d1mjca_ b.40.4.5 (A:) Major co 50.3 26 0.0019 28.9 7.9 52 1518-1569 3-56 (69)
112 d1c9oa_ b.40.4.5 (A:) Major co 49.7 27 0.0019 28.5 7.8 49 1520-1569 3-53 (66)
113 d1h95a_ b.40.4.5 (A:) Y-box pr 45.5 26 0.0019 29.7 7.3 56 1258-1313 7-66 (79)
114 d1bifa1 c.37.1.7 (A:37-249) 6- 44.6 2.6 0.00019 42.7 0.6 29 860-888 3-31 (213)
115 d1c9oa_ b.40.4.5 (A:) Major co 43.3 50 0.0036 26.7 8.6 50 1346-1400 3-54 (66)
116 d1ixra2 b.40.4.2 (A:1-62) DNA 40.7 13 0.00098 30.0 4.4 44 1088-1137 4-48 (62)
117 d1gxra_ b.69.4.1 (A:) Groucho/ 40.4 2E+02 0.015 29.4 32.7 258 537-850 58-316 (337)
118 d1ah9a_ b.40.4.5 (A:) Translat 38.5 12 0.0009 31.2 3.9 61 1343-1408 6-67 (71)
119 d1yvca1 b.40.4.12 (A:1-69) Hyp 38.2 29 0.0021 28.5 6.3 48 1167-1226 13-61 (69)
120 d1utca2 b.69.6.1 (A:4-330) Cla 38.0 2.4E+02 0.018 29.7 16.4 62 650-717 265-326 (327)
121 d1bjta_ e.11.1.1 (A:) DNA topo 36.6 33 0.0024 41.7 9.1 33 352-384 584-616 (760)
122 d1h95a_ b.40.4.5 (A:) Y-box pr 34.9 42 0.0031 28.3 6.9 57 1343-1400 7-66 (79)
123 d1yeza1 b.40.4.12 (A:1-68) Hyp 34.3 42 0.0031 27.4 6.7 48 1167-1226 11-59 (68)
124 d3d31a1 b.40.6.3 (A:230-348) S 34.3 1.4E+02 0.01 25.9 12.5 101 1172-1309 4-109 (119)
125 d1seta1 a.2.7.1 (A:1-110) Sery 33.7 50 0.0036 29.5 7.8 23 394-418 4-26 (110)
126 d1g6pa_ b.40.4.5 (A:) Major co 33.5 28 0.002 28.4 5.3 49 1520-1569 2-52 (66)
127 d1cuka3 b.40.4.2 (A:1-64) DNA 33.4 30 0.0022 28.0 5.4 47 1088-1139 4-51 (64)
128 d1utca2 b.69.6.1 (A:4-330) Cla 33.2 2.7E+02 0.02 29.3 14.6 73 738-820 255-327 (327)
129 d1mjca_ b.40.4.5 (A:) Major co 32.6 64 0.0047 26.3 7.6 50 1259-1312 3-56 (69)
130 d1erja_ b.69.4.1 (A:) Tup1, C- 29.5 3E+02 0.022 28.2 26.9 245 540-821 131-387 (388)
131 d2vnud2 b.40.4.5 (D:911-998) E 29.3 34 0.0025 29.6 5.3 56 1432-1487 4-76 (88)
132 d2vp4a1 c.37.1.1 (A:12-208) De 28.8 8.8 0.00064 38.1 1.6 31 858-888 8-38 (197)
133 d1fr3a_ b.40.6.1 (A:) Molybdat 25.9 39 0.0029 27.4 5.0 49 1086-1138 6-59 (67)
134 d1nr0a2 b.69.4.1 (A:313-611) A 25.7 3E+02 0.022 27.0 26.6 150 650-818 146-296 (299)
135 d1d2na_ c.37.1.20 (A:) Hexamer 25.6 13 0.00091 38.9 2.2 30 861-890 42-71 (246)
136 d1in4a2 c.37.1.20 (A:17-254) H 25.0 14 0.001 37.9 2.3 28 862-889 38-65 (238)
137 d1ixza_ c.37.1.20 (A:) AAA dom 24.7 14 0.001 38.6 2.3 29 862-890 45-73 (247)
138 d1sxja2 c.37.1.20 (A:295-547) 24.5 17 0.0013 37.3 3.1 29 861-889 54-82 (253)
139 d2vnud2 b.40.4.5 (D:911-998) E 24.4 87 0.0063 26.9 7.1 29 1520-1549 5-34 (88)
140 d1gvnb_ c.37.1.21 (B:) Plasmid 23.8 15 0.0011 38.1 2.3 32 861-892 34-67 (273)
141 d1yvca1 b.40.4.12 (A:1-69) Hyp 23.7 74 0.0054 25.9 6.3 48 1513-1571 13-60 (69)
142 d1bvsa3 b.40.4.2 (A:1-63) DNA 23.7 11 0.00081 30.7 1.0 44 1088-1137 4-48 (63)
143 d1np6a_ c.37.1.10 (A:) Molybdo 23.5 15 0.0011 34.9 2.2 23 860-882 3-25 (170)
144 d1yeza1 b.40.4.12 (A:1-68) Hyp 22.0 1.1E+02 0.0083 24.6 7.2 49 1338-1401 10-58 (68)
145 d1ah9a_ b.40.4.5 (A:) Translat 21.7 39 0.0028 28.0 4.1 62 1517-1578 6-67 (71)
146 d1r7ra3 c.37.1.20 (A:471-735) 21.6 20 0.0015 37.6 2.9 30 861-890 43-72 (265)
147 d1lv7a_ c.37.1.20 (A:) AAA dom 21.2 18 0.0013 37.9 2.3 28 862-889 48-75 (256)
148 d1h9ma2 b.40.6.2 (A:74-141) Cy 20.6 62 0.0045 26.2 5.2 47 1088-1138 7-59 (68)
149 d1g6pa_ b.40.4.5 (A:) Major co 20.3 59 0.0043 26.3 4.9 48 1261-1312 2-52 (66)
150 d1ixsb2 c.37.1.20 (B:4-242) Ho 20.2 20 0.0014 36.7 2.4 29 862-890 38-66 (239)
No 1
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=6.4e-135 Score=1255.28 Aligned_cols=492 Identities=56% Similarity=0.946 Sum_probs=457.6
Q ss_pred ccccCCCCccCCCcchhHHHHHHHhcCCCCCCCceeEEEehhhhccCcCCCCcchHHHHHHHHhhcCccccccccCCCCC
Q psy14505 30 VGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSIYDALVRMAQSFSLRCTLVDGQGNF 109 (1619)
Q Consensus 30 ~~Ralp~~~DGlKp~qRril~~~~~~~~~~~~~~~K~a~~~g~v~~~yhphgd~s~~~~~v~maq~~~~~~pl~~~~Gnf 109 (1619)
++|||||++||||||||||||+|+++|+.++++|+||||+||+|||+||||||+|+|+|||+|||+|+||+||++|||||
T Consensus 1 v~RaiP~~~DGlKp~qRril~~~~~~~l~~~~~~~k~a~~~g~v~~~yHpHGd~s~~~~iv~maq~~~~~~~ll~~~G~F 80 (493)
T d1ab4a_ 1 VGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNF 80 (493)
T ss_dssp CTTTSCBTTTCCCHHHHHHHHHHHHTTCCSSSCCEEHHHHHHHHHHHTCCSCHHHHHHHHHHTTCTTTCSSCSEEEESCC
T ss_pred CCCCCCccccCCcHHHHHHHHHHHhcCCCCCCCceeeeeeHHHHHhccCCCcHHHHHHHHHHHHHhhhhccccccCCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccccccccccHHHHHhhccCCCCccccccCCCCCcCCcceecCCCceeeecCCcceeeeeecCCCCCChHH
Q psy14505 110 GSIDGDSAAAMRYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMATNIPPHNLTE 189 (1619)
Q Consensus 110 Gs~~g~~~aa~RY~~~~ls~~~~~~~~~~d~~~~~~~~n~d~~~~eP~~~~~~~P~~L~ng~~Gia~G~at~ip~~n~~e 189 (1619)
||+|||+||||||||||||++|+.||+++|+++|+|+|||||+..||+||||+|||||||||+|||||||||||||||.|
T Consensus 81 Gs~~g~~~Aa~RYi~trLs~~~~~l~~~~d~~~~~~~~n~Dg~~~EP~~~p~~iP~lLvNG~~GIavG~sT~IP~hN~~e 160 (493)
T d1ab4a_ 81 GSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTE 160 (493)
T ss_dssp CCTTCCCCCCTTTCEEEECTTHHHHSTTTTTTCSCEEECTTSSSEEESSCCCSSCHHHHHCEEECCSSCCEEECCCCHHH
T ss_pred CCCCCCCCcccchHHhhhhHHHHHHHhhcccccccCccCCCCCcccceeecccchhHHHhhcchhhhhhhhccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCChHHHhccCCCCCCCCceEEeccccccccceecccEEEEeEEEEEEEeccCCccEEEEEecCCccc
Q psy14505 190 VIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVIIRAKTHIEEFNRENRTAIIIDELPYQVN 269 (1619)
Q Consensus 190 v~~~~~~~l~~~~~~~~~l~~~~~~p~~p~g~~i~~~~~~~~~y~~g~G~~~~~~~~~~~~~~~~~~~~i~itelP~~~~ 269 (1619)
||+||+++|++++++.++|++++|||||||||+|.|+.|+.++|+||+|++.+||+++++...+.++++|+||||||++|
T Consensus 161 ii~~~~~~i~~~~~~~~~L~~~ipgPdfP~g~~~~g~~~~~~~y~~G~g~i~~r~~~~ie~~~k~~~~tI~ITELP~~~~ 240 (493)
T d1ab4a_ 161 VINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVN 240 (493)
T ss_dssp HHHHHHHHHHCTTCCHHHHTTTCCSCCCSSCCEECCSHHHHHHHHHSEEEEEEECEEEEEC------CEEEEEECCTTCC
T ss_pred HHHHHHhhhccccccHHHHHhcCCCCCCCCcceEECcccHHHHHhcCCceEEEEeeEEEEeeccCCceEEEEEecCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999854456788999999999999
Q ss_pred HHHHHHHHHHHHhccCcCCcceeecccCCcceEEEEEecCCCCHHHHHHHHHhhcccccceeeeEEEEECCeeeeeCHHH
Q psy14505 270 KKSLLEKISQLVKEKKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKLYKQTQLQNTFGMNMLALVNGQPKLLNLKE 349 (1619)
Q Consensus 270 ~~~~~~~i~~~~~~~~~~~i~~~~d~s~~~~~~i~i~lk~~~~~~~~~~~l~k~t~l~~~~~~n~~~~~~~~p~~~~l~~ 349 (1619)
+++|+|+|++++++|++++|+|++|+||++|+||+|+++++.+++.++++|||+|+||+||++||+++++|+|+++|+++
T Consensus 241 t~~~~E~i~~lv~~kki~~I~d~rDes~~~~vr~vI~lk~~~~~~~~~~~L~k~t~L~ss~s~n~~~l~d~~pk~~~l~e 320 (493)
T d1ab4a_ 241 KARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKD 320 (493)
T ss_dssp HHHHHHHHHHHHTTTCSSCCCCEEECCCSSSCCEEEC------CHHHHHHHHHHSTTEEEEEEECEEEETTEEEECCHHH
T ss_pred HHHHHHHHHHHHHcCCCCcccccccccCCcceEEEEecCCcchHHHHHHHHHHhhhhhhccceeeeeecCCeeeeccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHcCCCHHHHHHHHHhhcCCCCchhhhhhcccc
Q psy14505 350 ILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKK 429 (1619)
Q Consensus 350 il~~f~~~R~~~~~rR~~~~l~k~~~r~~ileg~~~a~~~id~vi~iir~s~~~~~a~~~L~~~~~~~~~~~~~~~~~~~ 429 (1619)
||++|++||+++|+||++|+|+++++|+|+|+|+++|+.+||++|++||+|+++++|+..|+...|......+......+
T Consensus 321 IL~~f~~~R~e~~~kR~~y~L~kle~rl~iL~g~~~~i~~IdevI~iIr~s~~~~~ak~~L~~~~~~~~~~~~~~~~~~~ 400 (493)
T d1ab4a_ 321 IIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGD 400 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHCSSHHHHHHHHHHSCEECCGGGTTCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhhhccccChHHHHHHHHhcccccchHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998887776666555444
Q ss_pred cccccccccccccccCCCccccCHHHHHHhhccchhhcchHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q psy14505 430 NYNTISKINNISKLQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNI 509 (1619)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~Qa~aIL~m~L~~Lt~~e~~~l~~e~~~l~~~i~~l~~iL~~~~~~~~~i~~el~~ 509 (1619)
+....+..++.++ ..+..|.||+.||+|||+|||||||++|+++|++|+++|++++++|++||+|++++|++|++||++
T Consensus 401 ~~~~~e~~~~~~~-~~~~~y~lse~Qa~~IL~MrL~~LT~le~~kL~~E~~~l~~ei~eL~~iL~s~~~l~~~i~~EL~~ 479 (493)
T d1ab4a_ 401 DAARPEWLEPEFG-VRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL 479 (493)
T ss_dssp CCCSCTTSCTTSE-ESSSEEECCHHHHHHHHTCCGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ccccccccchhcc-ccCCcccCCHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4444444443332 234468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCcccc
Q psy14505 510 IKNKYGSHKKNIRRSEI 526 (1619)
Q Consensus 510 ik~~f~~~~~~~RrT~I 526 (1619)
++++||+ +|||+|
T Consensus 480 lk~kfg~----~RrT~I 492 (493)
T d1ab4a_ 480 VREQFGD----KRRTEI 492 (493)
T ss_dssp HHHHHCC----CCCSEE
T ss_pred HHHHhCC----CCCCCC
Confidence 9999999 999998
No 2
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment (residues 410-1202) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.4e-99 Score=971.19 Aligned_cols=480 Identities=21% Similarity=0.274 Sum_probs=385.0
Q ss_pred cceeccHHHHHHHHHHhhhhhhhccccCCCCccCCCcchhHHHHHHHhcCCCCCCCceeEEEehhhhccCcCCCCcchHH
Q psy14505 7 EVISILLEEEMCKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNLWNRPFVKCARVVGETMGKYHPHGDVSIY 86 (1619)
Q Consensus 7 ~~~~~~~~~~~~~~~~~ya~~~i~~Ralp~~~DGlKp~qRril~~~~~~~~~~~~~~~K~a~~~g~v~~~yhphgd~s~~ 86 (1619)
...++++++.+.++|+.||||++. |||||++||||||||||||+|+++|+.++.++.|+|++||+++| || |||+|||
T Consensus 248 ~~~~~~~~~~~~~~~~~~s~~~~~-RaiP~~~DGlKp~qRkil~~~~~~~~~~~~k~~k~a~~v~~~~~-yh-HGe~sl~ 324 (760)
T d1bjta_ 248 TLKEIPISDFINKELILFSLADNI-RSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTA-YH-HGEQSLA 324 (760)
T ss_dssp ---------CCTHHHHHHHHHHHH-HHSCBTTTCCCHHHHHHHHHHHHHTCCSCEEHHHHHHHHHHHHT-CC-SSSCCHH
T ss_pred cccceeHHHHHHHHHHHHHHHHHh-ccCCchhhcccHHHHHHHHHHHHhcCCCCCccccccchhhhhhc-CC-CCCcchh
Confidence 456799999999999999999877 99999999999999999999999999888899999999999997 77 9999999
Q ss_pred HHHHHHhhcC--ccccccccCCCCCCCC--CCCcccccccccccccHHHHHhhccCCCCccccccCCCCCcCCcceecCC
Q psy14505 87 DALVRMAQSF--SLRCTLVDGQGNFGSI--DGDSAAAMRYTECRLNKISNELLIDLDKETIDFISNYDGKEKEPSVLPTR 162 (1619)
Q Consensus 87 ~~~v~maq~~--~~~~pl~~~~GnfGs~--~g~~~aa~RY~~~~ls~~~~~~~~~~d~~~~~~~~n~d~~~~eP~~~~~~ 162 (1619)
+|||+|||+| |||+||++|||||||+ ||++||||||||||||++++.||+++|+++|+|++| ||+.+||.||||+
T Consensus 325 ~aiv~maQ~f~gsnn~~ll~~~G~fGsr~~~g~~~AA~RYietrLs~~~~~lf~~~D~~~l~~~~~-dg~~iEP~~y~pi 403 (760)
T d1bjta_ 325 QTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQE-DEKTVEPEWYLPI 403 (760)
T ss_dssp HHHHHHHCCSTTSCSSCSEEEESCCCCTTTTSTTCCCGGGCEEEECTTHHHHSCGGGGGGSCEEEE-TTEEEEESCCCCS
T ss_pred HHHHHHHhhhhhcceeeeeeccCCccccCCCCCcchHHHHHHhhHHHHHHHHhcccccceeecccC-CCceeCcccchhH
Confidence 9999999999 8999999999999996 899999999999999999999999999999999987 8888999999999
Q ss_pred CceeeecCCcceeeeeecCCCCCChHHHHHHHHHHhcCCCCChHHHhccCCCCCCCCceEEeccccccccceecccEEEE
Q psy14505 163 IPNLLINGSSGIAVGMATNIPPHNLTEVIDGVLYVLHNPECSINDLIKIIPAPDFPTAGIIYGLSSVHDGYYTGKGRVII 242 (1619)
Q Consensus 163 ~P~~L~ng~~Gia~G~at~ip~~n~~ev~~~~~~~l~~~~~~~~~l~~~~~~p~~p~g~~i~~~~~~~~~y~~g~G~~~~ 242 (1619)
|||||||||+|||||||||||||||.|||+||+++|+++++. .+.||+..|+|. .+.|. .|++.+
T Consensus 404 iP~lLvNGs~GIatG~aT~IPphNp~eVi~~i~~~i~~~~~~-----~~~P~~~Gf~G~--------i~~~~--~g~~~~ 468 (760)
T d1bjta_ 404 LPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELE-----QMHPWFRGWTGT--------IEEIE--PLRYRM 468 (760)
T ss_dssp SCHHHHTCEEEECSSCEEEECCBCHHHHHHHHHHHHTTCCCC-----CCCBCCTTCCSE--------EEEEE--TTEEEE
T ss_pred HHHHHHhhhhhhhhhhhhccCcccHHHHHHHHHHHhCCchhh-----ccCCCccccccc--------ccccc--ccceEE
Confidence 999999999999999999999999999999999999998853 456666655553 33444 456777
Q ss_pred eEEEEEEEeccCCccEEEEEecCCcccHHHHHHHHHHHHh--ccCcCCcceeecccCCcceEEEEEecCCCCHHHHHHHH
Q psy14505 243 RAKTHIEEFNRENRTAIIIDELPYQVNKKSLLEKISQLVK--EKKLECISNLRDESDKSGMRIVIELKRNEIPEIVLNKL 320 (1619)
Q Consensus 243 ~~~~~~~~~~~~~~~~i~itelP~~~~~~~~~~~i~~~~~--~~~~~~i~~~~d~s~~~~~~i~i~lk~~~~~~~~~~~l 320 (1619)
+|+++.. ++++|+||||||++|+++|+|+|++++. +++.+.|.+++|+| ++++||+|+++++.+++.++++|
T Consensus 469 ~g~~e~~-----~~~~I~ITELP~gvwt~~~~E~i~~ll~~~~K~~~~i~d~~d~s-~~~Vr~vI~lk~~~~~~~~~~~l 542 (760)
T d1bjta_ 469 YGRIEQI-----GDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQH-DDNIKFIITLSPEEMAKTRKIGF 542 (760)
T ss_dssp ECEEEEE-----ETTEEEEEECCTTCCHHHHHHHHHHHHSCCTTSCCCCCEEEECC-SSSCCEEEECCHHHHHHHHHHCH
T ss_pred EEEEeec-----CCCeEEEEeccccchhhhHHHHHHHHHhcccccCcccchhhccc-cccceeEEEecccccccchhhhh
Confidence 8877643 5679999999999999999999999874 45566678888866 46899999999999999999999
Q ss_pred Hhhcccccceee-eEEEEE-CC-eeeeeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhch-------
Q psy14505 321 YKQTQLQNTFGM-NMLALV-NG-QPKLLNLKEILYYFILHRKEVIKRRTIFELRKAREYAHILEGLTIALTNI------- 390 (1619)
Q Consensus 321 ~k~t~l~~~~~~-n~~~~~-~~-~p~~~~l~~il~~f~~~R~~~~~rR~~~~l~k~~~r~~ileg~~~a~~~i------- 390 (1619)
|++|+|++++++ ||++++ +| .|++.|+++||++|++||+++|+||++|++++++.+++++++.++.+..+
T Consensus 543 ~k~~kL~~s~s~~Nm~l~d~~g~i~k~~sl~eIL~~f~~~Rle~y~kRk~~~l~~l~~el~~l~~k~rFI~~vi~~~I~I 622 (760)
T d1bjta_ 543 YERFKLISPISLMNMVAFDPHGKIKKYNSVNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTV 622 (760)
T ss_dssp HHHTTCEEEEECTTEEEECTTSCEEEESSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred hhhhhhhhhhhhcceeEEcCCCcccchhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhHHHHHHHhhhheeee
Confidence 999999999996 788887 44 58999999999999999999999999999999999999999988765542
Q ss_pred -----hHHHHHHHcCCCHHHHHHHHHhhcCCCCchhhhhhccccccccccccccc--ccccCCCccccCHHHHHHhhccc
Q psy14505 391 -----DNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTISKINNI--SKLQNNDMYKLSDIQAQEILKMP 463 (1619)
Q Consensus 391 -----d~vi~iir~s~~~~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~Qa~aIL~m~ 463 (1619)
|++|+++++++.+..++..++...|....+........+......+.+.. ........+.++..|++|||+||
T Consensus 623 ~~~~kdeIi~~L~~~~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~e~~~~~~~~~~~~~~~ydYLL~Mr 702 (760)
T d1bjta_ 623 TNKPRNAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYEYLLGMR 702 (760)
T ss_dssp TTCCHHHHHHHHHHTTCCEECTTCCEECSCC-----------------------------------CTTTCBSHHHHTSC
T ss_pred ecCCHHHHHHHHHhCCCchhhhhhhhhcccchhhhHhhhhhhhcccccccccchhhhhhhhhhhccccchhHHHHHHhCh
Confidence 56666666666555444444433333322222111111000000000000 00011223667778999999999
Q ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCC
Q psy14505 464 LQRLTNMEQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKYGS 516 (1619)
Q Consensus 464 L~~Lt~~e~~~l~~e~~~l~~~i~~l~~iL~~~~~~~~~i~~el~~ik~~f~~ 516 (1619)
|++||++++++|.+|+++++++++.|+++ + ..++|.+||++++++|.+
T Consensus 703 L~~LT~eei~kL~~E~~~l~~Ei~~L~~~--t---~~~lW~~DL~~l~~~y~k 750 (760)
T d1bjta_ 703 IWSLTKERYQKLLKQKQEKETELENLLKL--S---AKDIWNTDLKAFEVGYQE 750 (760)
T ss_dssp GGGGSHHHHHHHHHHHHHHHHHHHHHHTS--C---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999883 3 347899999999999875
No 3
>d1suua_ b.68.10.1 (A:) DNA gyrase A C-terminal domain {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=100.00 E-value=3.3e-51 Score=479.29 Aligned_cols=301 Identities=28% Similarity=0.537 Sum_probs=276.2
Q ss_pred cceEEEEccCccEEeccCchhhhcccCCCCccccccCCCCeEEEEEEeeCccEEEEEeeCceEEEEEcccCCCCCccCCC
Q psy14505 542 QDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRG 621 (1619)
Q Consensus 542 e~~~v~ls~~GyiKr~~~~~~~~~~r~g~g~~~~~~k~~D~~~~~~~~~t~d~llifT~~Gkv~~i~v~elp~~~~~~~G 621 (1619)
|+++|++|++||+||+|.++|+.|+|||+|..+++++++|.+.+++.|+|||+||||||.|++|++++|+||+.+|+++|
T Consensus 1 Edvvv~ls~~GyiKR~~~~~~~~q~rg~~g~~~~~~k~~D~v~~~~~~~t~d~ll~fT~~G~~~~i~~~~ip~~~~~~~G 80 (304)
T d1suua_ 1 ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKG 80 (304)
T ss_dssp CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------
T ss_pred CCEEEEEECCCeEEEeeHHHHhhccCCCCCcccccccCCCEEEEEEEecCCCeEEEEechHhhcChhhhhcccccccccc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCceEEEEEecCCCCCCCCCCcEEEEEeCCceEEEeeCCCCcCCCCCCceeeecCCCCeEEEEEEecCCC
Q psy14505 622 KPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSY 701 (1619)
Q Consensus 622 ~~i~~ll~l~~~e~i~~i~~~~~~~~~~~~e~~~v~iT~~G~iKr~~~~~~~~~~r~G~~~~~lke~D~l~~~~~~~~~d 701 (1619)
.|+.++++++++|+++.++.+ +++.++.+++++|++|++||+++++|...+++|..+++|+++|+++++..++.++
T Consensus 81 ~~i~~l~~l~~~e~i~~~~~~----~~~~~~~~l~~~T~~G~iKr~~l~~f~~~~~~~~~a~kL~~~D~lv~v~~~~~~~ 156 (304)
T d1suua_ 81 QNISELINLGDQEEILTIKNS----KDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 156 (304)
T ss_dssp CBGGGTSCCCTTCCEEEEEEE----SCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred cccceeeeecccccccccccc----ccccccceEEEEEehhhhhhcccchhhccccccceeecccchhhccccccccccc
Confidence 999999999999999999887 4667788999999999999999999988888899999999999999999999999
Q ss_pred eEEEEeCCceEEEEecccccccCCCCCCccceecCCCCEEEEEEEecCCCCcEEEEEecCceeEEecccccccccccccc
Q psy14505 702 DIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGI 781 (1619)
Q Consensus 702 ~lll~T~~G~~~~~~~~eIp~~~r~a~Gv~~i~L~~~e~Iv~~~~~~~~~~~ll~~T~~G~~Kr~~l~e~~~~~R~~kG~ 781 (1619)
+++++|+.|++++|++.++|+++|.+.||++|+|.++|+++++.+.++ +.+++++|++|++||+++++|+.++|+++|+
T Consensus 157 ~v~~~t~~G~~lrf~~~~v~~~gr~a~Gv~~i~L~~~d~v~~~~~~~~-~~~ll~iT~~G~gKr~~~~e~~~~~Rg~~Gv 235 (304)
T d1suua_ 157 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKE-NPYLLIVSENGYGKRLNMSKISELKRGATGY 235 (304)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTT-CSEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred eeEeeccccceeeeccccccccCccccceeeecccccccceeeeeccC-CceEEEEecCCceEEccchhhhhhccccccc
Confidence 999999999999999999999999999999999999999999988877 6799999999999999999999999999999
Q ss_pred eeeeecc-CCCeEEEEEEecCCcEEEEEECCCeEEEEecCcccccCCCCCCeEEEEcCCCceEEEEEE
Q psy14505 782 ISIKTNK-RNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQR 848 (1619)
Q Consensus 782 ~~ikl~~-~~d~Lv~~~~~~~~~~i~l~T~~g~~lrf~~~eI~~~gr~a~Gv~~i~L~~~d~v~~~~~ 848 (1619)
.++++.+ +++.++++..++++++|+++|++|+++|+++++||.+||.|+||++|+|+ +|.+++++.
T Consensus 236 ~~~k~~~~~~~~vv~~~~v~~~d~i~l~T~~G~~~r~~~~~i~~~gR~~~Gv~~~~l~-~d~~v~~~~ 302 (304)
T d1suua_ 236 TSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVAGKVSEQGKDARGIQVLFLD-NDSLVSVSK 302 (304)
T ss_dssp ECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEGGGSCBCCTTCCCEECSCCS-SCCEEEEEE
T ss_pred ceeeccccCCCcEEEEEEeCCCCEEEEEeCCCEEEEEEhhHCCCCCCCCCCeEeEECC-CCCEEEEEE
Confidence 9999764 46899999999999999999999999999999999999999999999997 555777654
No 4
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=2.5e-51 Score=483.48 Aligned_cols=306 Identities=26% Similarity=0.472 Sum_probs=284.9
Q ss_pred cccCcceEEEEccCccEEeccCchhhhcccCCCCccccccCCCCeEEEEEEeeCccEEEEEeeCceEEEEEcccCCCCCc
Q psy14505 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSR 617 (1619)
Q Consensus 538 li~~e~~~v~ls~~GyiKr~~~~~~~~~~r~g~g~~~~~~k~~D~~~~~~~~~t~d~llifT~~Gkv~~i~v~elp~~~~ 617 (1619)
||++|+++|++|++|||||+++++|++|+++ +.++|++|.+.+++.|+|||+||||||.||+|++++|+||+++|
T Consensus 1 LI~~E~v~v~lS~~GyiKR~~~~~~~~~~~~-----~~~~k~~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~ 75 (323)
T d1wp5a_ 1 MVASEDVIVTVTKDGYVKRTSLRSYAASNGQ-----DFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRW 75 (323)
T ss_dssp CCSCCEEEEEEETTCEEEEEEHHHHHHTTTC-----CCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred CCCCCCEEEEEeCCCeEEEeeHHHhhhcCCC-----CCcccCCceEEEEEEEcCCCEEEEEecCCEEEEEeeccCccccc
Confidence 7999999999999999999999999999765 35579999999999999999999999999999999999999999
Q ss_pred cCCCccceecccCCCCceEEEEEecCCCCCCCCCCcEEEEEeCCceEEEeeCCCCcCCCC-CCceeeecCCCCeEEEEEE
Q psy14505 618 NSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRK-SGIIAVNLSNEDFLIGAAL 696 (1619)
Q Consensus 618 ~~~G~~i~~ll~l~~~e~i~~i~~~~~~~~~~~~e~~~v~iT~~G~iKr~~~~~~~~~~r-~G~~~~~lke~D~l~~~~~ 696 (1619)
+++|.|+.++++++++|+++.+.+. .+++++.+++++|++|++||+++++|.++++ +|..+++|+++|+++++..
T Consensus 76 ~s~G~pi~~ll~l~~~e~ii~~~~~----~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~ 151 (323)
T d1wp5a_ 76 KDLGQHIANIIPIDRDEEIIKAIPI----NDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHL 151 (323)
T ss_dssp TSCCEEGGGTSCCCTTCCEEEEEEE----SCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEE
T ss_pred ccccccceeeecccCCcceEEEeec----cccccceeEEEEeehhheeeccHHHhhhhhccchhhhccccccccccceec
Confidence 9999999999999999999999987 4566788999999999999999999987654 5899999999999999999
Q ss_pred ecCCCeEEEEeCCceEEEEecccccccCCCCCCccceecCCCCEEEEEEEecCCCCcEEEEEecCceeEEeccccccccc
Q psy14505 697 TDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNR 776 (1619)
Q Consensus 697 ~~~~d~lll~T~~G~~~~~~~~eIp~~~r~a~Gv~~i~L~~~e~Iv~~~~~~~~~~~ll~~T~~G~~Kr~~l~e~~~~~R 776 (1619)
+++.++++++|++|+++||+..++|+++|+++||++|+|+++|+|+++..+.+.+.+++++|++|++||+++++|+.++|
T Consensus 152 ~~~~~~i~l~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~e~~~~~R 231 (323)
T d1wp5a_ 152 TDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATR 231 (323)
T ss_dssp ECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCT
T ss_pred cCCCeEEEEEEecceeeEeecccccccCcccccccccccccccccchhhhccccccceeeeeeeheeecccchhhccccc
Confidence 99999999999999999999999999999999999999999999998877765567899999999999999999999999
Q ss_pred ccccceeeeeccCC-CeEEEEEEecCCcEEEEEECCCeEEEEecCcccccCCCCCCeEEEEcCCCceEEEEEEeecc
Q psy14505 777 GTKGIISIKTNKRN-GKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKI 852 (1619)
Q Consensus 777 ~~kG~~~ikl~~~~-d~Lv~~~~~~~~~~i~l~T~~g~~lrf~~~eI~~~gr~a~Gv~~i~L~~~d~v~~~~~~~~~ 852 (1619)
+++|+.++++.+++ +.++++..+.++++++++|++|+++|+++++||.+||+|+||++|+|+++|+|+++..++++
T Consensus 232 ggkGv~~~k~~k~~~~~v~~~~~~~~~d~l~l~T~~g~~~r~~~~~i~~~gR~~~Gv~~~~l~~~d~vv~~~~v~~~ 308 (323)
T d1wp5a_ 232 AKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGDIRFSDRYSNGSFVLDEEENGRVISVWKVEAE 308 (323)
T ss_dssp TSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGGSCBCCSSSCCEESSCHHHHCCEEEEEEECSS
T ss_pred cccccccccccccccceeeeeEecCCCCEEEEEeCCCEEEEEEhhhcCcCCCcCCCeEEEECCCCCEEEEEEEcCcc
Confidence 99999999976644 45667777788899999999999999999999999999999999999999999999998765
No 5
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.98 E-value=3.4e-32 Score=319.61 Aligned_cols=218 Identities=19% Similarity=0.267 Sum_probs=194.5
Q ss_pred CCCCcEEEEEeCCceEEEeeCCCCcCCCCCCceeeecCCCCeEEEEEEecCCCeEEEEeCCceEEEEecccccccCCCCC
Q psy14505 649 FPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSAR 728 (1619)
Q Consensus 649 ~~~e~~~v~iT~~G~iKr~~~~~~~~~~r~G~~~~~lke~D~l~~~~~~~~~d~lll~T~~G~~~~~~~~eIp~~~r~a~ 728 (1619)
+++|+++|++|++|||||+++++|+.++++| ++++++|.+.+++.|+++|+|+|||+.|++|++++++||..+|.++
T Consensus 2 I~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~---~~~k~~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~ 78 (323)
T d1wp5a_ 2 VASEDVIVTVTKDGYVKRTSLRSYAASNGQD---FAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDL 78 (323)
T ss_dssp CSCCEEEEEEETTCEEEEEEHHHHHHTTTCC---CCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred CCCCCEEEEEeCCCeEEEeeHHHhhhcCCCC---CcccCCceEEEEEEEcCCCEEEEEecCCEEEEEeeccCcccccccc
Confidence 5889999999999999999999998887654 5689999999999999999999999999999999999999999999
Q ss_pred Cccc---eecCCCCEEEEEEEecCC--CCcEEEEEecCceeEEecccccccccccccceeeeeccCCCeEEEEEEecCCc
Q psy14505 729 GVIG---MRLEKKQKVIALLVSNNQ--KQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYH 803 (1619)
Q Consensus 729 Gv~~---i~L~~~e~Iv~~~~~~~~--~~~ll~~T~~G~~Kr~~l~e~~~~~R~~kG~~~ikl~~~~d~Lv~~~~~~~~~ 803 (1619)
|.++ +.+.++|+++++++++++ +.+++++|++|++||+++++|.+.+| ++|..+++|++ +|+|++|.++++++
T Consensus 79 G~pi~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~-~~g~~~i~L~~-~D~l~~v~~~~~~~ 156 (323)
T d1wp5a_ 79 GQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY-SKPLTGINLKN-DDQVVDVHLTDGMN 156 (323)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC-SSCEECSCCCT-TCCEEEEEEECSCS
T ss_pred cccceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhc-cchhhhccccc-cccccceeccCCCe
Confidence 9886 567899999999998764 57899999999999999999986544 57999999988 89999999999999
Q ss_pred EEEEEECCCeEEEEecCcccccCCCCCCeEEEEcCCCceEEEEEEeeccccccccccEEEecCCcCCCCchhHH
Q psy14505 804 EIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQ 877 (1619)
Q Consensus 804 ~i~l~T~~g~~lrf~~~eI~~~gr~a~Gv~~i~L~~~d~v~~~~~~~~~~~~k~~~~iIti~g~~gsGK~~~~~ 877 (1619)
+++++|++|+++||+++++|+|||+++||++|+|+++|.++++..+.+.+ ..++++| ..|.||++...
T Consensus 157 ~i~l~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~vv~~~~~~~~~---~~ll~~T---~~G~gKr~~~~ 224 (323)
T d1wp5a_ 157 ELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKD---ESIVVAT---QRGAVKKMKLT 224 (323)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTT---CEEEEEE---TTSEEEEEEGG
T ss_pred EEEEEEecceeeEeecccccccCcccccccccccccccccchhhhccccc---cceeeee---eeheeecccch
Confidence 99999999999999999999999999999999999999999988776542 3555666 44778776654
No 6
>d1suua_ b.68.10.1 (A:) DNA gyrase A C-terminal domain {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=99.97 E-value=2.6e-31 Score=309.97 Aligned_cols=217 Identities=19% Similarity=0.287 Sum_probs=187.6
Q ss_pred CcEEEEEeCCceEEEeeCCCCcCCCCC--CceeeecCCCCeEEEEEEecCCCeEEEEeCCceEEEEecccccccCCCCCC
Q psy14505 652 NNYVFMSTSLGIVKKTLLSNFSNPRKS--GIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARG 729 (1619)
Q Consensus 652 e~~~v~iT~~G~iKr~~~~~~~~~~r~--G~~~~~lke~D~l~~~~~~~~~d~lll~T~~G~~~~~~~~eIp~~~r~a~G 729 (1619)
|+++|++|++||+||++.++|+.++|+ |...++++++|.+++++.|+++|+|++||++|++|++++++||..+|+++|
T Consensus 1 Edvvv~ls~~GyiKR~~~~~~~~q~rg~~g~~~~~~k~~D~v~~~~~~~t~d~ll~fT~~G~~~~i~~~~ip~~~~~~~G 80 (304)
T d1suua_ 1 ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKG 80 (304)
T ss_dssp CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------
T ss_pred CCEEEEEECCCeEEEeeHHHHhhccCCCCCcccccccCCCEEEEEEEecCCCeEEEEechHhhcChhhhhcccccccccc
Confidence 568999999999999999999999886 677889999999999999999999999999999999999999999999999
Q ss_pred ccc---eecCCCCEEEEEEEecCC--CCcEEEEEecCceeEEecccccccccccccceeeeeccCCCeEEEEEEecCCcE
Q psy14505 730 VIG---MRLEKKQKVIALLVSNNQ--KQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHE 804 (1619)
Q Consensus 730 v~~---i~L~~~e~Iv~~~~~~~~--~~~ll~~T~~G~~Kr~~l~e~~~~~R~~kG~~~ikl~~~~d~Lv~~~~~~~~~~ 804 (1619)
.++ +.|.++|+|++++.+.++ +.+++++|++|++||+++++|...+ ++|+.+++|++ +|+++++..++++++
T Consensus 81 ~~i~~l~~l~~~e~i~~~~~~~~~~~~~~l~~~T~~G~iKr~~l~~f~~~~--~~~~~a~kL~~-~D~lv~v~~~~~~~~ 157 (304)
T d1suua_ 81 QNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK--SRGVIVIKLND-KDFVTSAEIVFKDEK 157 (304)
T ss_dssp CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC------CEECBCCCT-TCCEEEEEEECTTCE
T ss_pred cccceeeeeccccccccccccccccccceEEEEEehhhhhhcccchhhccc--cccceeecccc-hhhccccccccccce
Confidence 775 678899999999988764 5689999999999999999997543 57999999988 899999999999999
Q ss_pred EEEEECCCeEEEEecCcccccCCCCCCeEEEEcCCCceEEEEEEeeccccccccccEEEecCCcCCCCchhHHH
Q psy14505 805 IMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLCKITMIKKYIPVITIDGPTASGKGTVAQL 878 (1619)
Q Consensus 805 i~l~T~~g~~lrf~~~eI~~~gr~a~Gv~~i~L~~~d~v~~~~~~~~~~~~k~~~~iIti~g~~gsGK~~~~~~ 878 (1619)
++++|++|+++||+++++|++||+|+||++|+|.++|+++++....++ ..+++++. .|.||++....
T Consensus 158 v~~~t~~G~~lrf~~~~v~~~gr~a~Gv~~i~L~~~d~v~~~~~~~~~----~~ll~iT~---~G~gKr~~~~e 224 (304)
T d1suua_ 158 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKEN----PYLLIVSE---NGYGKRLNMSK 224 (304)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTC----SEEEEEET---TSEEEEEEGGG
T ss_pred eEeeccccceeeeccccccccCccccceeeecccccccceeeeeccCC----ceEEEEec---CCceEEccchh
Confidence 999999999999999999999999999999999999999999877665 36667774 47777776654
No 7
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=99.94 E-value=1.8e-26 Score=257.39 Aligned_cols=214 Identities=38% Similarity=0.630 Sum_probs=198.0
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceec-----CceEEeCC
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFL-----GKEVYLNG 934 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 934 (1619)
++|+|+|++|+||+|.++.||+++|++|+|||.|||++|+...+.|..........+........+. ....++++
T Consensus 4 i~IaIdGp~GsGKgT~ak~La~~lg~~~istGdl~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (223)
T d1q3ta_ 4 IQIAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAATYMALKNQLGVEEVEALLALLDQHPISFGRSETGDQLVFVGD 83 (223)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHTTCCTTCHHHHHHHHHHSCCEEEEETTTEEEEEETT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCcEECHHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhhhhhcccchhhhHHhhcC
Confidence 5799999999999999999999999999999999999999999999988877777666665554432 23678899
Q ss_pred ccccccccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccCeeeecCCCeEEEEEcCHHHHHHhchHHHHh
Q psy14505 935 VNVTTLIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGTTVFPDAFLKIFLTADIKQRTKRRYKQLMQ 1014 (1619)
Q Consensus 935 ~~v~~~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~~v~p~a~~kifl~A~~e~Ra~Rr~~~l~~ 1014 (1619)
.++...+|+..+...+|.+|..|.+|..+...|+.+....+.+++||++++.++|++..++|++|+++.|+.||..++..
T Consensus 84 ~~~~~~~~~~~~~~~~s~ia~~~~~r~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 163 (223)
T d1q3ta_ 84 VDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEIAQQGGIVMDGRDIGTVVLPQAELKIFLVASVDERAERRYKENIA 163 (223)
T ss_dssp EEESSSSCSHHHHHHHHHHHTSHHHHHHHHHHHHHHHTTSCEEEECSSCSSSSGGGCSEEEEEECCHHHHHHHHHHHHHH
T ss_pred cccccchhhHHHHhHHHHHhCChhhhHHHHHHHHHHHhcCCceeeecccccccccccchhhhcccchhhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhhhh
Q psy14505 1015 KGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFATL 1073 (1619)
Q Consensus 1015 ~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~l 1073 (1619)
.+...+.+++.+.|++||..|.+|..+||.++.|+++||||++++|||++.|.+.+++.
T Consensus 164 ~~~~~~~~~~~~~i~~Rd~~D~~r~~~pL~~~~~~i~Idts~~s~eeV~~~I~~~i~kk 222 (223)
T d1q3ta_ 164 KGIETDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTGLNIQEVVEKIKAEAEKR 222 (223)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHTTCSSSCCSCCTTCEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHhhhcccCCCccCCCeEEEECCCCCHHHHHHHHHHHHHhh
Confidence 89889999999999999999999999999999999999999999999999999887653
No 8
>d1x75a1 e.11.1.1 (A:363-494) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=5.6e-27 Score=234.64 Aligned_cols=132 Identities=38% Similarity=0.649 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHcCCCHHHHHHHHHhhcCCCCchhhhhhccccccccccccccccc
Q psy14505 363 KRRTIFELRKAREYAHILEGLTIALTNIDNFIQIIRSTSTPQEAKNKIIESTWNLPDVSKIIGFNKKNYNTISKINNISK 442 (1619)
Q Consensus 363 ~rR~~~~l~k~~~r~~ileg~~~a~~~id~vi~iir~s~~~~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1619)
+||++|+|+|+++|+||||||++|++|||+||++||+|+|+++|+.+||++.|++..+..+....++........++..+
T Consensus 1 TRRt~f~L~Ka~~R~HILeGL~iAl~nID~VI~iIR~S~~~~eAk~~L~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (132)
T d1x75a1 1 TRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFG 80 (132)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHTTSSSHHHHHHHHHHSCEEC--CTTTTC---CCCSSCTTCCTTSE
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHcCCCcHHHHHHHHHHhcchhhHHHHHHhcccccccccccchhhc
Confidence 58999999999999999999999999999999999999999999999999999988777666555544444443333222
Q ss_pred ccCCCccccCHHHHHHhhccchhhcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy14505 443 LQNNDMYKLSDIQAQEILKMPLQRLTNMEQKKIINKYENVIKKVIDLTDILSN 495 (1619)
Q Consensus 443 ~~~~~~~~~~~~Qa~aIL~m~L~~Lt~~e~~~l~~e~~~l~~~i~~l~~iL~~ 495 (1619)
..+..|+||+.||+|||+|||+|||+||+++|.+|+++|.++|++|++||+|
T Consensus 81 -~~~~~~~LSe~QA~AIL~mrL~rLT~LE~~kl~~E~~eL~~~I~~l~~IL~S 132 (132)
T d1x75a1 81 -VRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGS 132 (132)
T ss_dssp -ESSSEEECCHHHHHHHHTCBGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -cccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455799999999999999999999999999999999999999999999987
No 9
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=99.68 E-value=1.6e-16 Score=175.59 Aligned_cols=216 Identities=44% Similarity=0.726 Sum_probs=168.9
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceec----CceEEeCCc
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFL----GKEVYLNGV 935 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 935 (1619)
.+|+|+|++||||+|.++.||+++|++|++||.|||++++...+.|..................... ...++.++.
T Consensus 4 piI~I~GppGSGKgT~ak~La~~~gl~~iStGdLlR~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (225)
T d1ckea_ 4 PVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGE 83 (225)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHTCCEEEEEETTEEEEEETTE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhCCcEECHHHHHHHHHHHHHHcCCchhhhhhhhhhhcccccccccccccceeeeccc
Confidence 4899999999999999999999999999999999999999999999877766655555444443322 235677788
Q ss_pred cccccccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccCeeeecCCCeEEEEEcCHHHHHHhchHHHHhc
Q psy14505 936 NVTTLIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGTTVFPDAFLKIFLTADIKQRTKRRYKQLMQK 1015 (1619)
Q Consensus 936 ~v~~~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~~v~p~a~~kifl~A~~e~Ra~Rr~~~l~~~ 1015 (1619)
+.+..++..............+..+..+...+..........+.+|.+.+...+.....++.+++.+...+|...+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (225)
T d1ckea_ 84 DVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQVK 163 (225)
T ss_dssp ECHHHHTSHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTCEEEEESSCCCCCCTTCSEEEEEECCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhHhhhhHHHHHHHHHHHHHhhhccccccccchhcccccccccccccccchhhhcccccccccccc
Confidence 88888888888777777777788888887777666666778888888898899988999999999999998888777777
Q ss_pred CCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhhhhhh
Q psy14505 1016 GFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFATLFK 1075 (1619)
Q Consensus 1016 ~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ll~ 1075 (1619)
...............|+..|.+|..+||.++.|+++||||++++|||++.|++++++.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~d~~~~~~pl~~~~~~~~Id~s~~s~eeV~~~I~~~I~~Kl~ 223 (225)
T d1ckea_ 164 GFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKLA 223 (225)
T ss_dssp TCCCCHHHHHHHHC-------------CCCCTTCEEEETTTSCHHHHHHHHHHHHHHHHS
T ss_pred cccchhhhHHHHHHHHHHHhhccccCCCcccCCEEEEECCCCCHHHHHHHHHHHHHHHHC
Confidence 777777888888888999999999999999999999999999999999999998876553
No 10
>d1sroa_ b.40.4.5 (A:) S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase {Escherichia coli [TaxId: 562]}
Probab=99.48 E-value=1.2e-14 Score=131.81 Aligned_cols=74 Identities=30% Similarity=0.570 Sum_probs=69.4
Q ss_pred cccceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCCCccccccCCCCCCEEEEEEEEeecCCCeEEEeeecC
Q psy14505 1426 HKKGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTDPGEEIIRNFKKGDEIEAIILSIDVEKERISLGIKQL 1501 (1619)
Q Consensus 1426 ~~vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LSlK~~ 1501 (1619)
+++|+++.|+|+++++||+||+|++++.||||.++++| .+.++|.+.|++||.|+|+|+++|+ ++|+.||+|++
T Consensus 3 ~kvG~iv~G~V~~v~~~G~fV~l~~~~~Glv~~sels~-~~~~~~~~~~~~G~~v~v~Vi~id~-~~ri~LS~k~a 76 (76)
T d1sroa_ 3 IEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIAD-KRVEKVTDYLQMGQEVPVKVLEVDR-QGRIRLSIKEA 76 (76)
T ss_dssp CCTTSEEEEEEEEEETTEEEEECSSSCCCBCCTTSSCS-SCCSCHHHHCCTTCEEEEEEEECCT-TCCCEEEECCC
T ss_pred CCCCCEEEEEEEEEeCcEEEEEeCCCCEEEEEhHHhCc-cccCCHHHccCCCCEEEEEEEEECC-CCCEEEEEEcC
Confidence 48999999999999999999999999999999999997 6778999999999999999999996 57899999974
No 11
>d1kl9a2 b.40.4.5 (A:3-88) Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=4.7e-14 Score=131.39 Aligned_cols=77 Identities=25% Similarity=0.380 Sum_probs=60.2
Q ss_pred cccc-ccceEEEEEEEEEecceEEEeeC--CCeEEEEeCCCCCCCCCccccccCCCCCCEEEEEEEEeecCCCeEEEeee
Q psy14505 1423 SIIH-KKGEKIKGIIKSITDFGIFIGLD--GNIDGLIHLSDLSWTDPGEEIIRNFKKGDEIEAIILSIDVEKERISLGIK 1499 (1619)
Q Consensus 1423 ~~~~-~vG~~v~G~V~~i~~~GvfV~~~--~~v~Glv~~sels~~~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LSlK 1499 (1619)
.+.+ ++|+++.|+|++++++|+||+|. +|+.||||.++++| .+..++.+.|++||.|+|+|+++|+++++|.||+|
T Consensus 7 ~~~~p~~G~iv~G~V~~i~~~G~fV~l~~~~~i~G~i~~sels~-~~~~~~~~~~~~Gd~v~~kV~~vd~~~~ki~LS~K 85 (86)
T d1kl9a2 7 QHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSR-RRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKR 85 (86)
T ss_dssp SSSSCCTTCEEEEEEEEECSSEEEEEETTTTTEEEEEEGGGC-------------CTTCEEEEEEEEEETTTTEEEEEST
T ss_pred hhcCCCCCCEEEEEEEEEeCCeEEEEEecCCCEEEEEEeeeccc-cccccceEEeecccEEEEEEEEEECCCCEEEEEee
Confidence 3344 47999999999999999999996 58999999999997 67789999999999999999999999999999998
Q ss_pred c
Q psy14505 1500 Q 1500 (1619)
Q Consensus 1500 ~ 1500 (1619)
+
T Consensus 86 q 86 (86)
T d1kl9a2 86 R 86 (86)
T ss_dssp T
T ss_pred C
Confidence 5
No 12
>d1sroa_ b.40.4.5 (A:) S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase {Escherichia coli [TaxId: 562]}
Probab=99.47 E-value=1.4e-14 Score=131.42 Aligned_cols=75 Identities=36% Similarity=0.593 Sum_probs=70.7
Q ss_pred ccccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCccccCCCccccccCCCEEEEEEEEeecccceEEEeeecc
Q psy14505 1338 RYPRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEINEERRRISLGMKQC 1414 (1619)
Q Consensus 1338 ~l~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK~~ 1414 (1619)
++++|+++.|+|+++.++|+||+++++++||+|.++++| .+..+|.+.|++||+|+|+|+++|+ ++|+.||+|++
T Consensus 2 d~kvG~iv~G~V~~v~~~G~fV~l~~~~~Glv~~sels~-~~~~~~~~~~~~G~~v~v~Vi~id~-~~ri~LS~k~a 76 (76)
T d1sroa_ 2 EIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIAD-KRVEKVTDYLQMGQEVPVKVLEVDR-QGRIRLSIKEA 76 (76)
T ss_dssp CCCTTSEEEEEEEEEETTEEEEECSSSCCCBCCTTSSCS-SCCSCHHHHCCTTCEEEEEEEECCT-TCCCEEEECCC
T ss_pred CCCCCCEEEEEEEEEeCcEEEEEeCCCCEEEEEhHHhCc-cccCCHHHccCCCCEEEEEEEEECC-CCCEEEEEEcC
Confidence 589999999999999999999999999999999999999 6788999999999999999999996 57899999975
No 13
>d3bzka4 b.40.4.5 (A:637-730) Tex S1-domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.46 E-value=4.5e-14 Score=133.70 Aligned_cols=85 Identities=26% Similarity=0.508 Sum_probs=76.6
Q ss_pred CCcccccccccceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCCCccccccCCCCCCEEEEEEEEeecCCCeEEEe
Q psy14505 1418 PWENFSIIHKKGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTDPGEEIIRNFKKGDEIEAIILSIDVEKERISLG 1497 (1619)
Q Consensus 1418 ~~~~~~~~~~vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LS 1497 (1619)
.+..+. .+++|++++|+|++++++|+||+|++++.|+||.++++| .+..++.+.|++||.|+|+|+++|+++++|.||
T Consensus 9 ~ie~~~-~~k~G~iv~g~V~~v~~~G~~V~l~~~i~G~i~~~~ls~-~~~~~~~~~~~vGq~v~~~V~~id~~~~~i~LS 86 (94)
T d3bzka4 9 GVESLK-DLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSE-KFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLS 86 (94)
T ss_dssp TCCCGG-GCCTTCEEEEEEEEEETTEEEEECSSSSCEEEEGGGGCS-SCCSCHHHHCCTTCEEEEEEEEEETTTTEEEEE
T ss_pred hhhHHh-cCCCCCEEEEEEEEEECcEEEEEeCCCceEEeehhhhhc-ccccChhhhhccCcEEEEEEEEEECCCCEEEEE
Confidence 344444 458999999999999999999999999999999999996 678899999999999999999999999999999
Q ss_pred eecCcCCC
Q psy14505 1498 IKQLEGDP 1505 (1619)
Q Consensus 1498 lK~~~~~p 1505 (1619)
+|++ .+|
T Consensus 87 ~K~~-e~P 93 (94)
T d3bzka4 87 MRMS-DTP 93 (94)
T ss_dssp SCTT-CCC
T ss_pred Eecc-CCC
Confidence 9985 444
No 14
>d3bzka4 b.40.4.5 (A:637-730) Tex S1-domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.42 E-value=8.5e-14 Score=131.73 Aligned_cols=82 Identities=35% Similarity=0.556 Sum_probs=76.2
Q ss_pred cccccccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCccccCCCccccccCCCEEEEEEEEeecccceEEEeeecc
Q psy14505 1335 LSFRYPRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEINEERRRISLGMKQC 1414 (1619)
Q Consensus 1335 ~~~~l~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK~~ 1414 (1619)
..+++++|+++.|+|+++.++|+||+++++++|++|.++++| ....+|.+.|++||.|+|+|+.+|++++++.||+|++
T Consensus 12 ~~~~~k~G~iv~g~V~~v~~~G~~V~l~~~i~G~i~~~~ls~-~~~~~~~~~~~vGq~v~~~V~~id~~~~~i~LS~K~~ 90 (94)
T d3bzka4 12 SLKDLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSE-KFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLSMRMS 90 (94)
T ss_dssp CGGGCCTTCEEEEEEEEEETTEEEEECSSSSCEEEEGGGGCS-SCCSCHHHHCCTTCEEEEEEEEEETTTTEEEEESCTT
T ss_pred HHhcCCCCCEEEEEEEEEECcEEEEEeCCCceEEeehhhhhc-ccccChhhhhccCcEEEEEEEEEECCCCEEEEEEecc
Confidence 346799999999999999999999999999999999999999 6788999999999999999999999999999999975
Q ss_pred cCCC
Q psy14505 1415 KDNP 1418 (1619)
Q Consensus 1415 ~~~~ 1418 (1619)
.+|
T Consensus 91 -e~P 93 (94)
T d3bzka4 91 -DTP 93 (94)
T ss_dssp -CCC
T ss_pred -CCC
Confidence 444
No 15
>d2ahob2 b.40.4.5 (B:1-84) Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.41 E-value=9.3e-14 Score=128.83 Aligned_cols=73 Identities=21% Similarity=0.439 Sum_probs=65.2
Q ss_pred ccceEEEEEEEEEecceEEEeeC--CCeEEEEeCCCCCCCCCccccccCCCCCCEEEEEEEEeecCCCeEEEeeec
Q psy14505 1427 KKGEKIKGIIKSITDFGIFIGLD--GNIDGLIHLSDLSWTDPGEEIIRNFKKGDEIEAIILSIDVEKERISLGIKQ 1500 (1619)
Q Consensus 1427 ~vG~~v~G~V~~i~~~GvfV~~~--~~v~Glv~~sels~~~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LSlK~ 1500 (1619)
++|+++.|+|++++++|+||+|. +|+.||||.++++| .+..++.+.|++||.|+|+|+++|++++++.||+|+
T Consensus 10 ~~G~iv~G~V~~v~~~G~fV~l~~~~gi~Gli~~sels~-~~~~~~~~~~~~G~~v~~kV~~vd~~~~~i~LS~Kq 84 (84)
T d2ahob2 10 SEGEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSS-KWVKNIRDVLKENRKVIVKVIRVDRRKGTVDVSLKK 84 (84)
T ss_dssp CTTCCCEEEEEEEETTEEEEEETTTTTEEEEECGGGCC------CHHHHTCSSCEEECEEEEEETTTTEEEEESSS
T ss_pred CCCCEEEEEEEEEECCEEEEEECCcCCEEEEEEcccccc-ccccccceEeecccEEEEEEEEEECCCCEEEEEEcC
Confidence 47999999999999999999997 58999999999997 677899999999999999999999999999999985
No 16
>d1kl9a2 b.40.4.5 (A:3-88) Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=2.9e-13 Score=125.96 Aligned_cols=73 Identities=18% Similarity=0.430 Sum_probs=58.7
Q ss_pred ccceeEEEEEEEEcCCeEEEEEc--CCEEEEEeccccCccccCCCccccccCCCEEEEEEEEeecccceEEEeeec
Q psy14505 1340 PRGTRLLGKVTNLTDYGAFVEIE--KGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEINEERRRISLGMKQ 1413 (1619)
Q Consensus 1340 ~~G~iv~g~V~~v~~~G~fV~l~--~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK~ 1413 (1619)
++|+++.|+|+++.++|+||+|. ++++||+|.++++| ....+|.+.|++||.|+|+|+++|++++++.||+|+
T Consensus 12 ~~G~iv~G~V~~i~~~G~fV~l~~~~~i~G~i~~sels~-~~~~~~~~~~~~Gd~v~~kV~~vd~~~~ki~LS~Kq 86 (86)
T d1kl9a2 12 EVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSR-RRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRR 86 (86)
T ss_dssp CTTCEEEEEEEEECSSEEEEEETTTTTEEEEEEGGGC-------------CTTCEEEEEEEEEETTTTEEEEESTT
T ss_pred CCCCEEEEEEEEEeCCeEEEEEecCCCEEEEEEeeeccc-cccccceEEeecccEEEEEEEEEECCCCEEEEEeeC
Confidence 58999999999999999999996 58999999999999 678899999999999999999999999999999985
No 17
>d2ahob2 b.40.4.5 (B:1-84) Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.36 E-value=3.5e-13 Score=124.91 Aligned_cols=74 Identities=18% Similarity=0.415 Sum_probs=65.8
Q ss_pred cccceeEEEEEEEEcCCeEEEEEc--CCEEEEEeccccCccccCCCccccccCCCEEEEEEEEeecccceEEEeeec
Q psy14505 1339 YPRGTRLLGKVTNLTDYGAFVEIE--KGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEINEERRRISLGMKQ 1413 (1619)
Q Consensus 1339 l~~G~iv~g~V~~v~~~G~fV~l~--~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK~ 1413 (1619)
.++|+++.|+|+++.++|+||+|. ++++||+|.++++| .+..+|.+.|++||+|+|+|+++|++++++.||+|+
T Consensus 9 p~~G~iv~G~V~~v~~~G~fV~l~~~~gi~Gli~~sels~-~~~~~~~~~~~~G~~v~~kV~~vd~~~~~i~LS~Kq 84 (84)
T d2ahob2 9 PSEGEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSS-KWVKNIRDVLKENRKVIVKVIRVDRRKGTVDVSLKK 84 (84)
T ss_dssp CCTTCCCEEEEEEEETTEEEEEETTTTTEEEEECGGGCC------CHHHHTCSSCEEECEEEEEETTTTEEEEESSS
T ss_pred CCCCCEEEEEEEEEECCEEEEEECCcCCEEEEEEcccccc-ccccccceEeecccEEEEEEEEEECCCCEEEEEEcC
Confidence 358999999999999999999996 48999999999999 678899999999999999999999999999999985
No 18
>d2ba0a1 b.40.4.5 (A:53-135) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.34 E-value=9.2e-13 Score=121.72 Aligned_cols=77 Identities=22% Similarity=0.332 Sum_probs=70.8
Q ss_pred ccceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCCCccccccCCCCCCEEEEEEEEeecCCCeEEEeeecCcCC
Q psy14505 1427 KKGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTDPGEEIIRNFKKGDEIEAIILSIDVEKERISLGIKQLEGD 1504 (1619)
Q Consensus 1427 ~vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LSlK~~~~~ 1504 (1619)
++|++|.|+|++++++|+||++++++.|++|.++++|.....++.+.|++||.|.|+|+++|+ ++++.||+|.....
T Consensus 4 k~Gd~V~G~V~~v~~~g~~V~i~~~~~g~l~~se~s~~~~~~~~~~~~~vGd~V~~kV~~vd~-~~~i~LS~k~~~~~ 80 (83)
T d2ba0a1 4 SVGDVVIGIIREVAANGWAVDIYSPYQAFLPVSENPEMKPNKKPNEVLDIGDAIIAKVLNIDP-KMKVTLTMKDRICR 80 (83)
T ss_dssp CTTCEEEEEEEEECSSEEEEECSSSSCEEEEGGGCTTCCTTSCGGGTCCTTCEEEEEEEEECT-TCCEEEECCSSSCE
T ss_pred CCCCEEEEEEEEEECCEEEEecCCCeeEEEecccccccccccChhhhcccccEEEEEEEEECC-CCCEEEEecCCCCC
Confidence 679999999999999999999999999999999999877778899999999999999999995 57899999986543
No 19
>d2ba0a1 b.40.4.5 (A:53-135) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.28 E-value=2.6e-12 Score=118.67 Aligned_cols=78 Identities=19% Similarity=0.340 Sum_probs=71.0
Q ss_pred cccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCccccCCCccccccCCCEEEEEEEEeecccceEEEeeecccCC
Q psy14505 1339 YPRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEINEERRRISLGMKQCKDN 1417 (1619)
Q Consensus 1339 l~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK~~~~~ 1417 (1619)
.++|++|.|+|+++.++|+||++++++.|++|.++++|.....+|.+.|++||.|.|+|+++|+ ++++.||+|.....
T Consensus 3 Pk~Gd~V~G~V~~v~~~g~~V~i~~~~~g~l~~se~s~~~~~~~~~~~~~vGd~V~~kV~~vd~-~~~i~LS~k~~~~~ 80 (83)
T d2ba0a1 3 PSVGDVVIGIIREVAANGWAVDIYSPYQAFLPVSENPEMKPNKKPNEVLDIGDAIIAKVLNIDP-KMKVTLTMKDRICR 80 (83)
T ss_dssp CCTTCEEEEEEEEECSSEEEEECSSSSCEEEEGGGCTTCCTTSCGGGTCCTTCEEEEEEEEECT-TCCEEEECCSSSCE
T ss_pred CCCCCEEEEEEEEEECCEEEEecCCCeeEEEecccccccccccChhhhcccccEEEEEEEEECC-CCCEEEEecCCCCC
Confidence 4789999999999999999999999999999999999866677899999999999999999995 57899999986543
No 20
>d1wi5a_ b.40.4.5 (A:) S1-domain of RRP5 protein homolog (PDCD11, KIAA0185) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=2.6e-12 Score=126.67 Aligned_cols=80 Identities=16% Similarity=0.222 Sum_probs=72.2
Q ss_pred ccccceEEEEEEEEEecceEEEeeC-CCeEEEEeCCCCCCCCCccccccCCCCCCEEEEEEEEeecCCCeEEEeeecCcC
Q psy14505 1425 IHKKGEKIKGIIKSITDFGIFIGLD-GNIDGLIHLSDLSWTDPGEEIIRNFKKGDEIEAIILSIDVEKERISLGIKQLEG 1503 (1619)
Q Consensus 1425 ~~~vG~~v~G~V~~i~~~GvfV~~~-~~v~Glv~~sels~~~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LSlK~~~~ 1503 (1619)
.+++|++++|+|++++++|+||+|. +++.||||.++++|.....+|.+.|++||.|.|+|+++|++++++.||+|+...
T Consensus 18 ~l~~G~iv~G~V~~i~~~G~~V~lg~~~~~G~l~~~els~~~~~~~~~~~~~vGq~v~~~V~~vd~~~~~i~LS~k~~~~ 97 (119)
T d1wi5a_ 18 ALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEV 97 (119)
T ss_dssp TCCTTCEEEEEEEEECSSEEEEECCCSSCEEEEEHHHHHHHHHHHSSSCCCCTTCEEEEEEEECCTTSCEEEEECCCCCS
T ss_pred hcCCCCEEEEEEEEEeccEEEEEEeccccceEEeHHHhccccccCCHHHhcccceEEEEEEEEEeCCCCEEEEEecHHHh
Confidence 3489999999999999999999994 899999999999964445678889999999999999999999999999998754
Q ss_pred C
Q psy14505 1504 D 1504 (1619)
Q Consensus 1504 ~ 1504 (1619)
.
T Consensus 98 ~ 98 (119)
T d1wi5a_ 98 S 98 (119)
T ss_dssp C
T ss_pred h
Confidence 4
No 21
>d1wi5a_ b.40.4.5 (A:) S1-domain of RRP5 protein homolog (PDCD11, KIAA0185) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=4.2e-12 Score=125.17 Aligned_cols=83 Identities=14% Similarity=0.247 Sum_probs=75.1
Q ss_pred ccccccceeEEEEEEEEcCCeEEEEEc-CCEEEEEeccccCccccCCCccccccCCCEEEEEEEEeecccceEEEeeecc
Q psy14505 1336 SFRYPRGTRLLGKVTNLTDYGAFVEIE-KGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEINEERRRISLGMKQC 1414 (1619)
Q Consensus 1336 ~~~l~~G~iv~g~V~~v~~~G~fV~l~-~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK~~ 1414 (1619)
.+++++|+++.|+|+++.++|+||+++ ++++||||.++++|.....+|.+.|++||.|+|+|+++|++++++.||+|++
T Consensus 16 ~~~l~~G~iv~G~V~~i~~~G~~V~lg~~~~~G~l~~~els~~~~~~~~~~~~~vGq~v~~~V~~vd~~~~~i~LS~k~~ 95 (119)
T d1wi5a_ 16 AEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSVGHS 95 (119)
T ss_dssp TTTCCTTCEEEEEEEEECSSEEEEECCCSSCEEEEEHHHHHHHHHHHSSSCCCCTTCEEEEEEEECCTTSCEEEEECCCC
T ss_pred HhhcCCCCEEEEEEEEEeccEEEEEEeccccceEEeHHHhccccccCCHHHhcccceEEEEEEEEEeCCCCEEEEEecHH
Confidence 347999999999999999999999995 7999999999999754566889999999999999999999999999999987
Q ss_pred cCCC
Q psy14505 1415 KDNP 1418 (1619)
Q Consensus 1415 ~~~~ 1418 (1619)
....
T Consensus 96 ~~~~ 99 (119)
T d1wi5a_ 96 EVST 99 (119)
T ss_dssp CSCC
T ss_pred Hhhh
Confidence 6543
No 22
>d1go3e1 b.40.4.5 (E:79-184) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.21 E-value=7.5e-12 Score=120.66 Aligned_cols=83 Identities=30% Similarity=0.435 Sum_probs=70.9
Q ss_pred ccceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCCCc----------cccccCCCCCCEEEEEEEEeecCCCe---
Q psy14505 1427 KKGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTDPG----------EEIIRNFKKGDEIEAIILSIDVEKER--- 1493 (1619)
Q Consensus 1427 ~vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~~~----------~~~~~~f~vGq~V~~~Vl~vd~e~~r--- 1493 (1619)
++|+++.|+|++|++||+||++ ++++||||.++|+|+... .++.+.|++||.|+|+|++||.++++
T Consensus 2 ~~gei~~g~V~~v~~~G~FVel-~~ieGlv~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~Gd~v~vkV~~vd~~~~~~~~ 80 (106)
T d1go3e1 2 EMYELIEGEVVDVVEFGSFVRL-GPLDGLIHVSQIMDDYVSYDPKREAIIGKETGKVLEIGDYVRARIVAISLKAERKRG 80 (106)
T ss_dssp CTTCEEEEEEEEEETTEEEEEC-SSSEEEEEGGGSCSSCEEECCC--CEEETTTCCEECTTCEEEEEEEEEECCC-----
T ss_pred CCCCEEEEEEEEEeeeEEEEEe-eCeEEEEEeecccCceeeeccceeEEeecccccceeecceEEEEEEEEchhhccccC
Confidence 5799999999999999999999 579999999999974322 36778999999999999999999887
Q ss_pred --EEEeeecCcCCCccccc
Q psy14505 1494 --ISLGIKQLEGDPFNNYV 1510 (1619)
Q Consensus 1494 --i~LSlK~~~~~p~~~~~ 1510 (1619)
+.||+|+...+||....
T Consensus 81 ~~i~ls~K~~~~~~~e~~~ 99 (106)
T d1go3e1 81 SKIALTMRQPYLGKLEWIE 99 (106)
T ss_dssp CEEEEECCSTTCEEHHHHH
T ss_pred ceeecccccCCCCcchhhh
Confidence 78999998888887554
No 23
>d1go3e1 b.40.4.5 (E:79-184) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.15 E-value=1.4e-11 Score=118.72 Aligned_cols=85 Identities=24% Similarity=0.341 Sum_probs=72.3
Q ss_pred ccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCccccC----------CCccccccCCCEEEEEEEEeecccce---
Q psy14505 1340 PRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWINKN----------VTPSKIVQLNDTVEIMILEINEERRR--- 1406 (1619)
Q Consensus 1340 ~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~~~----------~~~~~~~~vG~~V~vrVl~id~e~~r--- 1406 (1619)
++|++++|+|+++.+||+||+++ +++||||.++|+|.... .++.+.|++||.|+|+|+++|.++++
T Consensus 2 ~~gei~~g~V~~v~~~G~FVel~-~ieGlv~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~Gd~v~vkV~~vd~~~~~~~~ 80 (106)
T d1go3e1 2 EMYELIEGEVVDVVEFGSFVRLG-PLDGLIHVSQIMDDYVSYDPKREAIIGKETGKVLEIGDYVRARIVAISLKAERKRG 80 (106)
T ss_dssp CTTCEEEEEEEEEETTEEEEECS-SSEEEEEGGGSCSSCEEECCC--CEEETTTCCEECTTCEEEEEEEEEECCC-----
T ss_pred CCCCEEEEEEEEEeeeEEEEEee-CeEEEEEeecccCceeeeccceeEEeecccccceeecceEEEEEEEEchhhccccC
Confidence 58999999999999999999995 79999999999873221 47789999999999999999998876
Q ss_pred --EEEeeecccCCCCcccccc
Q psy14505 1407 --ISLGMKQCKDNPWENFSII 1425 (1619)
Q Consensus 1407 --i~LSlK~~~~~~~~~~~~~ 1425 (1619)
+.||+|+...+||....+.
T Consensus 81 ~~i~ls~K~~~~~~~e~~~~~ 101 (106)
T d1go3e1 81 SKIALTMRQPYLGKLEWIEEE 101 (106)
T ss_dssp CEEEEECCSTTCEEHHHHHHH
T ss_pred ceeecccccCCCCcchhhhhH
Confidence 7899999888888776544
No 24
>d2je6i1 b.40.4.5 (I:66-152) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.14 E-value=1.9e-11 Score=113.72 Aligned_cols=74 Identities=20% Similarity=0.306 Sum_probs=66.9
Q ss_pred ccceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCC--CccccccCCCCCCEEEEEEEEeecCCCeEEEeeecC
Q psy14505 1427 KKGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTD--PGEEIIRNFKKGDEIEAIILSIDVEKERISLGIKQL 1501 (1619)
Q Consensus 1427 ~vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~--~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LSlK~~ 1501 (1619)
++|++|.|+|++++++|+||++.+++.||+|.++++|+. ...++.+.|++||.|.|+|+++|+ .+++.||+|..
T Consensus 6 k~Gdiv~G~V~~i~~~g~fV~i~~~~~gll~~s~~~~~~~~~~~~~~~~~~~Gd~v~~kV~~vd~-~~~i~LS~k~~ 81 (87)
T d2je6i1 6 KINDIVIGLVEDVEIYGWVVDIKAPYKAYLPASNLLGRSINVGEDLRRYLDVGDYVIARIENFDR-SIDPVLSVKGK 81 (87)
T ss_dssp CTTCEEEEEEEEECSSEEEEECSSSSCEEEEHHHHHTSCCCTTCCCSSSCCTTCEEEEEEEEEET-TEEEEEECCST
T ss_pred CCCCEEEEEEEEEECCEEEEEeCCCEEEEEehHHhCCceeccccccchhhcccceEEEEEEEECC-CCCEEEEEecC
Confidence 579999999999999999999999999999999999742 335788899999999999999996 57999999974
No 25
>d2je6i1 b.40.4.5 (I:66-152) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.10 E-value=5e-11 Score=110.78 Aligned_cols=75 Identities=16% Similarity=0.130 Sum_probs=67.1
Q ss_pred cccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCccc--cCCCccccccCCCEEEEEEEEeecccceEEEeeecc
Q psy14505 1339 YPRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWIN--KNVTPSKIVQLNDTVEIMILEINEERRRISLGMKQC 1414 (1619)
Q Consensus 1339 l~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~--~~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK~~ 1414 (1619)
.++|++|.|+|+++.++|+||+++++++||+|.++++|.. ...++.+.|++||.|.|+|+++|+ .+++.||+|..
T Consensus 5 Pk~Gdiv~G~V~~i~~~g~fV~i~~~~~gll~~s~~~~~~~~~~~~~~~~~~~Gd~v~~kV~~vd~-~~~i~LS~k~~ 81 (87)
T d2je6i1 5 PKINDIVIGLVEDVEIYGWVVDIKAPYKAYLPASNLLGRSINVGEDLRRYLDVGDYVIARIENFDR-SIDPVLSVKGK 81 (87)
T ss_dssp CCTTCEEEEEEEEECSSEEEEECSSSSCEEEEHHHHHTSCCCTTCCCSSSCCTTCEEEEEEEEEET-TEEEEEECCST
T ss_pred CCCCCEEEEEEEEEECCEEEEEeCCCEEEEEehHHhCCceeccccccchhhcccceEEEEEEEECC-CCCEEEEEecC
Confidence 5689999999999999999999999999999999999832 234688899999999999999996 47899999975
No 26
>d2z0sa1 b.40.4.5 (A:60-147) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Aeropyrum pernix [TaxId: 56636]}
Probab=99.08 E-value=4.9e-11 Score=111.17 Aligned_cols=74 Identities=18% Similarity=0.314 Sum_probs=66.1
Q ss_pred ccceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCC---CccccccCCCCCCEEEEEEEEeecCCCeEEEeeecC
Q psy14505 1427 KKGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTD---PGEEIIRNFKKGDEIEAIILSIDVEKERISLGIKQL 1501 (1619)
Q Consensus 1427 ~vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~---~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LSlK~~ 1501 (1619)
++|++|.|+|++++++|+||++.+++.|++|.++++|+. ...++.+.|++||.|+|+|+++|++ +++.||+|+.
T Consensus 6 k~GdvV~G~V~~v~~~g~fV~i~~~~~g~l~~se~~~~~~~~~~~~~~~~~~vGd~V~~kV~~vd~~-~~i~Ls~k~~ 82 (88)
T d2z0sa1 6 QAGDVVIGLIQSVGIMNWFVDINSPYVAVLSVQDFLGRPFNPAVDDMQSLLKVGDYIKAKVVAFDKT-RSPLLTVQGE 82 (88)
T ss_dssp CTTCCEEEEEEEECSSEEEEECSSSSCEEEEHHHHHTSCCCTTTTCCTTSSCTTCEEEEEEEEECTT-SCEEEECCSS
T ss_pred CCCCEEEEEEEEEECCeEEEEeCCCeEEEEehHHhCcccccccccchhhhcccCcEEEEEEEEECCC-CCEEEEEecC
Confidence 589999999999999999999999999999999998643 2246778999999999999999954 7899999974
No 27
>d2z0sa1 b.40.4.5 (A:60-147) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Aeropyrum pernix [TaxId: 56636]}
Probab=99.05 E-value=1e-10 Score=108.95 Aligned_cols=75 Identities=11% Similarity=0.158 Sum_probs=66.6
Q ss_pred cccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCcccc---CCCccccccCCCEEEEEEEEeecccceEEEeeecc
Q psy14505 1339 YPRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWINK---NVTPSKIVQLNDTVEIMILEINEERRRISLGMKQC 1414 (1619)
Q Consensus 1339 l~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~~---~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK~~ 1414 (1619)
.++|++|.|+|+++.++|+||+++++.+|++|.++++|... ..++++.|++||.|.|+|+++|++ +++.||+|+.
T Consensus 5 Pk~GdvV~G~V~~v~~~g~fV~i~~~~~g~l~~se~~~~~~~~~~~~~~~~~~vGd~V~~kV~~vd~~-~~i~Ls~k~~ 82 (88)
T d2z0sa1 5 PQAGDVVIGLIQSVGIMNWFVDINSPYVAVLSVQDFLGRPFNPAVDDMQSLLKVGDYIKAKVVAFDKT-RSPLLTVQGE 82 (88)
T ss_dssp CCTTCCEEEEEEEECSSEEEEECSSSSCEEEEHHHHHTSCCCTTTTCCTTSSCTTCEEEEEEEEECTT-SCEEEECCSS
T ss_pred CCCCCEEEEEEEEEECCeEEEEeCCCeEEEEehHHhCcccccccccchhhhcccCcEEEEEEEEECCC-CCEEEEEecC
Confidence 57999999999999999999999999999999999987332 236778999999999999999965 6899999974
No 28
>d1e3pa2 b.40.4.5 (A:656-717) S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase {Streptomyces antibioticus [TaxId: 1890]}
Probab=98.99 E-value=8.3e-12 Score=107.78 Aligned_cols=59 Identities=27% Similarity=0.431 Sum_probs=36.7
Q ss_pred EEEEEEecceEEEeeCCCeEEEEeCCCCCCC---CCccccccCCCCCCEEEEEEEEeecCCC
Q psy14505 1434 GIIKSITDFGIFIGLDGNIDGLIHLSDLSWT---DPGEEIIRNFKKGDEIEAIILSIDVEKE 1492 (1619)
Q Consensus 1434 G~V~~i~~~GvfV~~~~~v~Glv~~sels~~---~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ 1492 (1619)
|+|++|++||+||++.++++||||.|+++|. .++.+|++.|++||+|+|+|+++|++++
T Consensus 1 G~V~~i~~fG~FV~l~~g~~Glihiseis~~~~~~~v~~~~~~~~~G~~V~vkV~~iD~~~r 62 (62)
T d1e3pa2 1 GSVVKTTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGK 62 (62)
T ss_dssp CBEEECC-CSCEECCC---CCCCC-------------------CCSSCBCCCCCCCCCSSCC
T ss_pred CEEEEEEeceEEEEecCCceEEEEHHHcccccccccccCHHHhcCCCCEEEEEEEEEcCCCC
Confidence 7899999999999999999999999999963 4678999999999999999999997653
No 29
>d1e3pa2 b.40.4.5 (A:656-717) S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase {Streptomyces antibioticus [TaxId: 1890]}
Probab=98.88 E-value=3.3e-11 Score=103.91 Aligned_cols=59 Identities=29% Similarity=0.556 Sum_probs=36.6
Q ss_pred EEEEEEcCCeEEEEEcCCEEEEEeccccCcc---ccCCCccccccCCCEEEEEEEEeecccc
Q psy14505 1347 GKVTNLTDYGAFVEIEKGIEGLVHISEMDWI---NKNVTPSKIVQLNDTVEIMILEINEERR 1405 (1619)
Q Consensus 1347 g~V~~v~~~G~fV~l~~gv~GlV~~sels~~---~~~~~~~~~~~vG~~V~vrVl~id~e~~ 1405 (1619)
|+|+++.+||+||+|.++++||+|+|+|||. .+..+|.+.|++||+|+|+|+++|++++
T Consensus 1 G~V~~i~~fG~FV~l~~g~~Glihiseis~~~~~~~v~~~~~~~~~G~~V~vkV~~iD~~~r 62 (62)
T d1e3pa2 1 GSVVKTTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGK 62 (62)
T ss_dssp CBEEECC-CSCEECCC---CCCCC-------------------CCSSCBCCCCCCCCCSSCC
T ss_pred CEEEEEEeceEEEEecCCceEEEEHHHcccccccccccCHHHhcCCCCEEEEEEEEEcCCCC
Confidence 7899999999999999999999999999863 4667999999999999999999997653
No 30
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=98.87 E-value=2.7e-09 Score=111.04 Aligned_cols=156 Identities=21% Similarity=0.198 Sum_probs=98.1
Q ss_pred EEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccccccc
Q psy14505 862 ITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTTLI 941 (1619)
Q Consensus 862 Iti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i 941 (1619)
|.+-|++|+||+|+++.||++||++|+|++.+.+ .+.|.+.. .+...
T Consensus 3 I~liG~~GsGKsTi~k~La~~l~~~~~d~d~~ie------~~~g~~i~---~~~~~------------------------ 49 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIE------QKFNQKVS---EIFEQ------------------------ 49 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHTCEEEEHHHHHH------HHHTSCHH---HHHHH------------------------
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCEEecCchhh------hHHhhhhh---hHHHh------------------------
Confidence 3344899999999999999999999999987744 23344321 11000
Q ss_pred cccccccccccccccHHHHHHHHHHHHhhhcCCCeEEecc--ccCeeeecCCCeEEEEEcCHHHHHHhchHHHH-hcCCC
Q psy14505 942 RNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGR--DMGTTVFPDAFLKIFLTADIKQRTKRRYKQLM-QKGFS 1018 (1619)
Q Consensus 942 r~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GR--d~~~~v~p~a~~kifl~A~~e~Ra~Rr~~~l~-~~~~~ 1018 (1619)
...+..|+....++..+...+.+|+..- .+..-.++++.+.|||+||++++++|...+-. .+...
T Consensus 50 ------------~g~~~~r~~e~~v~~~l~~~~~~v~~~~g~~~~~~~l~~~~~vI~L~~s~~~l~~Rl~~~~~~~Rp~~ 117 (161)
T d1viaa_ 50 ------------KRENFFREQEQKMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKADFEYLKKRLDKDEISKRPLF 117 (161)
T ss_dssp ------------HCHHHHHHHHHHHHHHHTTCCSEEEECCTTGGGSTTGGGGCEEEEEECCHHHHTTCCCGGGTTTSCTT
T ss_pred ------------hhhccchhhhhhhchhhhhccccccccccchhhHHHHHhCCeEEEeccchHHHHHHHccccccccccc
Confidence 1122445555666777777766666532 22233345567889999999999999533210 11111
Q ss_pred CCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhh
Q psy14505 1019 VSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFA 1071 (1619)
Q Consensus 1019 ~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~ 1071 (1619)
.+...+.+.+.+|+..-.. ...++|||++++++++++.|++.++
T Consensus 118 ~~~~~~~~l~~~r~~~Y~~---------~ad~~Idt~~~s~eei~~~I~~~i~ 161 (161)
T d1viaa_ 118 YDEIKAKKLYNERLSKYEQ---------KANFILNIENKNIDELLSEIKKVIK 161 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHH---------HCSEEEECTTCCHHHHHHHHHHHHC
T ss_pred cCchHHHHHHHHHHHHHHh---------hCCEEEECCCCCHHHHHHHHHHHhC
Confidence 2444445545555533111 1137899999999999999987653
No 31
>d2nn6h1 b.40.4.5 (H:73-167) S1-domain of Ribosomal RNA-processing protein 4, RRP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=2.7e-09 Score=100.35 Aligned_cols=74 Identities=18% Similarity=0.274 Sum_probs=63.9
Q ss_pred ccceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCC---------CCccccccCCCCCCEEEEEEEEeecCCCeEEEe
Q psy14505 1427 KKGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWT---------DPGEEIIRNFKKGDEIEAIILSIDVEKERISLG 1497 (1619)
Q Consensus 1427 ~vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~---------~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LS 1497 (1619)
++|++|.|+|++++++|+||++.....|++|.|+++|. ....++.+.|++||.|.|+|+++|. .+++.||
T Consensus 7 ~vGdiV~G~V~~v~~~g~~V~I~~~~~g~l~is~i~~~~~~~rr~~~~~~~~~~~~~~~Gd~V~~kV~~v~~-dg~i~Ls 85 (95)
T d2nn6h1 7 EVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFS-DGAVSLH 85 (95)
T ss_dssp CSSBCCCEEEEEEETTEEEEECSSSSCEEEESSCCC-------------CHHHHHHSCSSCEECCEEEEEET-TTEEEEE
T ss_pred CCCCEEEEEEEEEecCcEEEEeCCCceEEEEHHHccccccccccccchhhhhhhhhcccccEEEEEEEEECC-CCCEEEE
Confidence 57999999999999999999999999999999999863 2334567789999999999999996 5899999
Q ss_pred eecC
Q psy14505 1498 IKQL 1501 (1619)
Q Consensus 1498 lK~~ 1501 (1619)
++..
T Consensus 86 ~r~~ 89 (95)
T d2nn6h1 86 TRSL 89 (95)
T ss_dssp CCSS
T ss_pred eccc
Confidence 9864
No 32
>d2nn6h1 b.40.4.5 (H:73-167) S1-domain of Ribosomal RNA-processing protein 4, RRP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.72 E-value=2.5e-09 Score=100.53 Aligned_cols=75 Identities=15% Similarity=0.209 Sum_probs=63.2
Q ss_pred cccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCcccc---------CCCccccccCCCEEEEEEEEeecccceEEE
Q psy14505 1339 YPRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWINK---------NVTPSKIVQLNDTVEIMILEINEERRRISL 1409 (1619)
Q Consensus 1339 l~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~~---------~~~~~~~~~vG~~V~vrVl~id~e~~ri~L 1409 (1619)
.++|++|.|+|+++.++|+||+++...+|++|.|+++|... ..++.+.|++||.|.|+|+++|. ++++.|
T Consensus 6 P~vGdiV~G~V~~v~~~g~~V~I~~~~~g~l~is~i~~~~~~~rr~~~~~~~~~~~~~~~Gd~V~~kV~~v~~-dg~i~L 84 (95)
T d2nn6h1 6 GEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFS-DGAVSL 84 (95)
T ss_dssp CCSSBCCCEEEEEEETTEEEEECSSSSCEEEESSCCC-------------CHHHHHHSCSSCEECCEEEEEET-TTEEEE
T ss_pred CCCCCEEEEEEEEEecCcEEEEeCCCceEEEEHHHccccccccccccchhhhhhhhhcccccEEEEEEEEECC-CCCEEE
Confidence 46899999999999999999999989999999999987321 12345679999999999999996 589999
Q ss_pred eeecc
Q psy14505 1410 GMKQC 1414 (1619)
Q Consensus 1410 SlK~~ 1414 (1619)
|+|..
T Consensus 85 s~r~~ 89 (95)
T d2nn6h1 85 HTRSL 89 (95)
T ss_dssp ECCSS
T ss_pred Eeccc
Confidence 99864
No 33
>d2ix0a3 b.40.4.5 (A:558-644) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=98.71 E-value=1.2e-08 Score=93.68 Aligned_cols=69 Identities=17% Similarity=0.114 Sum_probs=59.2
Q ss_pred cceEEEEEEEEEecceEEEeeCC-CeEEEEeCCCCCCCCCcc-----------ccccCCCCCCEEEEEEEEeecCCCeEE
Q psy14505 1428 KGEKIKGIIKSITDFGIFIGLDG-NIDGLIHLSDLSWTDPGE-----------EIIRNFKKGDEIEAIILSIDVEKERIS 1495 (1619)
Q Consensus 1428 vG~~v~G~V~~i~~~GvfV~~~~-~v~Glv~~sels~~~~~~-----------~~~~~f~vGq~V~~~Vl~vd~e~~ri~ 1495 (1619)
.|+.+.|.|++|+++|+||++.+ +++||||.++|+|+.+.- +....|++||.|+|+|+++|+++++|.
T Consensus 3 ~~~~F~g~Is~v~~~GifV~L~e~~~eGlI~~s~L~~d~y~~d~~~~~l~~~~~~~~~~~~Gd~V~V~v~~vd~~~r~I~ 82 (87)
T d2ix0a3 3 TDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSII 82 (87)
T ss_dssp SCCCEEEEEEEEETTEEEEEETTTCCEEEEEGGGTCSCGGGEEEETTTTEEEETTEEEEETTCEEEEEEEEEETTTTEEE
T ss_pred CCCEEEEEEEEEEcCeEEEEEecCCcEEEEEehhCCCceEEEeccceEEEEEEcccEEEECCCEEEEEEEEEecccCeEE
Confidence 37889999999999999999954 799999999999764321 234579999999999999999999997
Q ss_pred E
Q psy14505 1496 L 1496 (1619)
Q Consensus 1496 L 1496 (1619)
+
T Consensus 83 ~ 83 (87)
T d2ix0a3 83 A 83 (87)
T ss_dssp E
T ss_pred E
Confidence 5
No 34
>d2ix0a3 b.40.4.5 (A:558-644) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=98.57 E-value=5.7e-08 Score=89.18 Aligned_cols=69 Identities=16% Similarity=0.331 Sum_probs=58.3
Q ss_pred cceeEEEEEEEEcCCeEEEEEc-CCEEEEEeccccCccccC-----------CCccccccCCCEEEEEEEEeecccceEE
Q psy14505 1341 RGTRLLGKVTNLTDYGAFVEIE-KGIEGLVHISEMDWINKN-----------VTPSKIVQLNDTVEIMILEINEERRRIS 1408 (1619)
Q Consensus 1341 ~G~iv~g~V~~v~~~G~fV~l~-~gv~GlV~~sels~~~~~-----------~~~~~~~~vG~~V~vrVl~id~e~~ri~ 1408 (1619)
.|+.++|.|++++++|+||+|. .+++||||.++|+|.... .++.+.|++||+|+|+|+++|+++++|.
T Consensus 3 ~~~~F~g~Is~v~~~GifV~L~e~~~eGlI~~s~L~~d~y~~d~~~~~l~~~~~~~~~~~~Gd~V~V~v~~vd~~~r~I~ 82 (87)
T d2ix0a3 3 TDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSII 82 (87)
T ss_dssp SCCCEEEEEEEEETTEEEEEETTTCCEEEEEGGGTCSCGGGEEEETTTTEEEETTEEEEETTCEEEEEEEEEETTTTEEE
T ss_pred CCCEEEEEEEEEEcCeEEEEEecCCcEEEEEehhCCCceEEEeccceEEEEEEcccEEEECCCEEEEEEEEEecccCeEE
Confidence 4678999999999999999995 479999999999764321 1245679999999999999999999986
Q ss_pred E
Q psy14505 1409 L 1409 (1619)
Q Consensus 1409 L 1409 (1619)
+
T Consensus 83 ~ 83 (87)
T d2ix0a3 83 A 83 (87)
T ss_dssp E
T ss_pred E
Confidence 4
No 35
>d1y14b1 b.40.4.5 (B:81-171) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.45 E-value=2.1e-07 Score=86.60 Aligned_cols=67 Identities=15% Similarity=0.147 Sum_probs=58.9
Q ss_pred cceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCCCc----------cccccCCCCCCEEEEEEEEeecCCCeEEE
Q psy14505 1428 KGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTDPG----------EEIIRNFKKGDEIEAIILSIDVEKERISL 1496 (1619)
Q Consensus 1428 vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~~~----------~~~~~~f~vGq~V~~~Vl~vd~e~~ri~L 1496 (1619)
+|+++.|+|++++++|+||++ +.++||+|.+++.++ +. .+..+.|++||.|+++|+++|.+++++..
T Consensus 3 ~Gev~~g~I~~v~~~G~fv~l-g~~eg~i~~~~l~~~-~~~d~~~~~~~~~~~~~~~~~Gd~VrvkV~~v~~~~~~i~~ 79 (91)
T d1y14b1 3 KGEVVDGTVVSCSQHGFEVQV-GPMKVFVTKHLMPQD-LTFNAGSNPPSYQSSEDVITIKSRIRVKIEGCISQVSSIHA 79 (91)
T ss_dssp TTCEEEEEEEEEETTEEEEEE-TTEEEEEEGGGSCTT-CEECC-----CEECSSCEECTTCEEEEEEEEEEEETTEEEE
T ss_pred CCCEEEEEEEEEEeeEEEEEE-cCeEEEEEhhhcCcc-eEEccccceeEecccCeEEeCCCEEEEEEEEEecccCccEE
Confidence 599999999999999999999 579999999999854 33 34456799999999999999999999965
No 36
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=98.41 E-value=1.3e-06 Score=90.29 Aligned_cols=160 Identities=19% Similarity=0.167 Sum_probs=91.0
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHccc--ce--e-cCceEEeCC
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLN--YN--F-LGKEVYLNG 934 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~--~-~~~~~~~~~ 934 (1619)
.++.+.|++|+||+|.++.|++++|+++++++.+++.....-...+.......... ...... +. . ....+.+
T Consensus 7 ~iivl~G~~GsGKsT~a~~La~~l~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-- 83 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKP-WLQALNDAAFAMQRTNKVSLI-- 83 (171)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHTCEEEEGGGGCCHHHHHHHHTTCCCCHHHHHH-HHHHHHHHHHHHHHHCSEEEE--
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeechhhhhHHHHhhhhccCcceehhhhHH-HHHHHHHHHHHHHhccCceEe--
Confidence 45667799999999999999999999999999988766554444444433222111 000000 00 0 0000000
Q ss_pred ccccccccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccCeeeecCCCeEEEEEcCHHHHHHhchHHHHh
Q psy14505 935 VNVTTLIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGTTVFPDAFLKIFLTADIKQRTKRRYKQLMQ 1014 (1619)
Q Consensus 935 ~~v~~~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~~v~p~a~~kifl~A~~e~Ra~Rr~~~l~~ 1014 (1619)
...+.....++.+ +++ ...+ .-|||++|++++.+|...+
T Consensus 84 ----------------~~~~~~~~~~~~~----~~~------------~~~~------~~v~l~~~~e~~~~Rl~~R--- 122 (171)
T d1knqa_ 84 ----------------VCSALKKHYRDLL----REG------------NPNL------SFIYLKGDFDVIESRLKAR--- 122 (171)
T ss_dssp ----------------ECCCCSHHHHHHH----HTT------------CTTE------EEEEEECCHHHHHHHHHTS---
T ss_pred ----------------eccchHHHHHHHH----HHh------------CCCc------eEEeecCCHHHHHHHHHhC---
Confidence 0001111222111 111 1112 3489999999999994322
Q ss_pred cCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhhh
Q psy14505 1015 KGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFAT 1072 (1619)
Q Consensus 1015 ~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ 1072 (1619)
.+...+.+-+..++.. .-.|+....+.++||++. ++|++++.|++.+++
T Consensus 123 ~~~~~~~~~~~~~~~~--------~e~~~~~e~~~~~id~~~-~~e~v~~~i~~~lk~ 171 (171)
T d1knqa_ 123 KGHFFKTQMLVTQFET--------LQEPGADETDVLVVDIDQ-PLEGVVASTIEVIKK 171 (171)
T ss_dssp TTCCCCHHHHHHHHHH--------CCCCCTTCTTEEEEECSS-CHHHHHHHHHHHHHC
T ss_pred cCCCccHHHHHhhHHH--------hhCCCcccCCEEEEeCCC-CHHHHHHHHHHHhcC
Confidence 2233344444443322 123666667889999985 999999999887753
No 37
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40 E-value=2.1e-07 Score=99.13 Aligned_cols=178 Identities=16% Similarity=0.190 Sum_probs=99.0
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccccc
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTT 939 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 939 (1619)
++|.+.|++||||+|.++.||+++|+.|+++|.++|..+. ...++. ...+...+.. |.
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~g~~~i~~g~llR~~~~----~~~~~~-~~~~~~~~~~-------------~~---- 59 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERK----NPDSQY-GELIEKYIKE-------------GK---- 59 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHH----CTTSTT-HHHHHHHHHT-------------TC----
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCceEcHHHHHHHHHH----hhhhhH-HHHHHHHHhc-------------CC----
Confidence 4788999999999999999999999999999999995442 222221 2222222211 00
Q ss_pred cccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccCee--e-----ec---CCCeEEEEEcCHHHHHHhch
Q psy14505 940 LIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGTT--V-----FP---DAFLKIFLTADIKQRTKRRY 1009 (1619)
Q Consensus 940 ~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~~--v-----~p---~a~~kifl~A~~e~Ra~Rr~ 1009 (1619)
.+......+.+...+.+.........+++++|...... . +. ..++.||+.++.++..+|+.
T Consensus 60 ---------~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~pr~~~~~~~l~~~~~~~~~~~~vi~l~~~~~~~~~r~~ 130 (194)
T d1teva_ 60 ---------IVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCL 130 (194)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHHHHCTTCCEEEEESCCCSHHHHHHHHHHHTTTCEEEEEEEEECCHHHHHHHHH
T ss_pred ---------ccccchhhHHHHHhhcccchhhhcccceeeccchhhHHHHHHHhhhhhccccccEEEeecCcchhheeecc
Confidence 00111111222222222222223456788888421100 0 01 12467899999999999877
Q ss_pred HHHHhcCC-CCCHHHHHHHHHhhhhhcccCCCC-CCCCCCCceEEccCcccchhhhhhhhhhhh
Q psy14505 1010 KQLMQKGF-SVSMSDLLINLIKRDIRDKTRNLS-PLKCPEQAHLLNTSKMNINQVVNQILDCFA 1071 (1619)
Q Consensus 1010 ~~l~~~~~-~~~~~~~~~~i~~rD~~d~~r~~~-~l~~~~dal~Idts~l~ieevv~~I~~~i~ 1071 (1619)
++-...+. ..+.+.+.+.+.. .......+. -|+.......||++. ++++|.+.|++.+.
T Consensus 131 ~R~~~~~r~~~~~e~i~~r~~~--y~~~~~~l~~~y~~~~~~~~IDa~~-s~eeV~~~I~~il~ 191 (194)
T d1teva_ 131 ERGKSSGRSDDNRESLEKRIQT--YLQSTKPIIDLYEEMGKVKKIDASK-SVDEVFDEVVQIFD 191 (194)
T ss_dssp HHHHTSSCCSCCHHHHHHHHHH--HHHHHHHHHHHHHHTTCEEEEETTS-CHHHHHHHHHHHHH
T ss_pred cCCCcccCCccchHHHHHHHHH--HHHHHHHHHHHHHhcCCEEEEECCC-CHHHHHHHHHHHHh
Confidence 76444332 2344445444332 221111000 022222346799875 99999999987654
No 38
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.32 E-value=2e-07 Score=96.83 Aligned_cols=147 Identities=17% Similarity=0.197 Sum_probs=86.3
Q ss_pred CCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccccccccccc
Q psy14505 866 GPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTTLIRNEK 945 (1619)
Q Consensus 866 g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ir~~~ 945 (1619)
|++|+||+|+++.||++||++|+|++.++. ...|.+.. ++...
T Consensus 8 G~~G~GKSTig~~La~~l~~~fiD~D~~ie------~~~g~~i~---~~~~~---------------------------- 50 (165)
T d2iyva1 8 GLPGSGKSTIGRRLAKALGVGLLDTDVAIE------QRTGRSIA---DIFAT---------------------------- 50 (165)
T ss_dssp CSTTSSHHHHHHHHHHHHTCCEEEHHHHHH------HHHSSCHH---HHHHH----------------------------
T ss_pred CCCCCCHHHHHHHHHHHhCCCeEeeccchh------hhhhhhhh---hhhhh----------------------------
Confidence 999999999999999999999999986644 23354322 11000
Q ss_pred cccccccccccHHHHHHHHHHHHhhh-cCCCeEEeccccCeeeecC------CCeEEEEEcCHHHHHHhchHHHHhcC--
Q psy14505 946 VSNNASKIAKFKNIRKELFKIQVKFR-KFPGLVADGRDMGTTVFPD------AFLKIFLTADIKQRTKRRYKQLMQKG-- 1016 (1619)
Q Consensus 946 ~~~~~s~~a~~~~vr~~~~~~~r~~a-~~~~~V~~GRd~~~~v~p~------a~~kifl~A~~e~Ra~Rr~~~l~~~~-- 1016 (1619)
.-....|+...+...++. .+..+++.|- +.++.+. ....|||.+|++++.+|...+ ..++
T Consensus 51 --------~g~~~~r~~e~~~~~~~~~~~~~vi~~gg--~~~~~~~~~~~l~~~~~I~L~~~~~~~~~R~~~~-~~Rpll 119 (165)
T d2iyva1 51 --------DGEQEFRRIEEDVVRAALADHDGVLSLGG--GAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGN-TVRPLL 119 (165)
T ss_dssp --------HCHHHHHHHHHHHHHHHHHHCCSEEECCT--TGGGSHHHHHHHTTSCEEEEECCHHHHHHHTTCC-CCCSST
T ss_pred --------hhHHHHHHHHhhhhhhccccccccccccc--cccccccccccccccceeeeeccchhhhhccccc-ccchhc
Confidence 011123333333333332 3445555552 2222221 236799999999999994322 1111
Q ss_pred CCCCH-HHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhh
Q psy14505 1017 FSVSM-SDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDC 1069 (1619)
Q Consensus 1017 ~~~~~-~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~ 1069 (1619)
.+.+. +.+.+.+.+|...-. . ..+++|||++++++++++.|++.
T Consensus 120 ~~~~~~e~~~~l~~eR~~~Y~--------~-~ad~~Idt~~~s~~ei~~~Ii~~ 164 (165)
T d2iyva1 120 AGPDRAEKYRALMAKRAPLYR--------R-VATMRVDTNRRNPGAVVRHILSR 164 (165)
T ss_dssp TSCCHHHHHHHHHHHHHHHHH--------H-HCSEEEECSSSCHHHHHHHHHTT
T ss_pred cCccHHHHHHHHHHHHHHHHH--------h-hCCEEEECCCCCHHHHHHHHHhc
Confidence 11233 345555555553211 1 11388999999999999999764
No 39
>d1y14b1 b.40.4.5 (B:81-171) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.30 E-value=9.7e-07 Score=82.00 Aligned_cols=67 Identities=16% Similarity=0.220 Sum_probs=59.3
Q ss_pred CCcEEEEEEEEEecCeEEEEeCCEEEEeeccccCcccc----------CCCccccccCCEEEEEEEEeecCCCeEEE
Q psy14505 1256 EGCTVKGVVKNITDYGAFIDLGGIDGLLHITDIAWRRV----------KHPSEILTIGQDISTKILKYDQEKNRVSL 1322 (1619)
Q Consensus 1256 ~G~iv~g~V~~v~~~G~~V~l~gi~g~l~~sels~~~~----------~~~~~~~~vG~~v~vrVl~vd~~~~~i~L 1322 (1619)
.|+++.|+|++++++|+||+++.++||+|.+.|++.+. .+..+.|+.|+.|+++|+.+|.+.+++.+
T Consensus 3 ~Gev~~g~I~~v~~~G~fv~lg~~eg~i~~~~l~~~~~~d~~~~~~~~~~~~~~~~~Gd~VrvkV~~v~~~~~~i~~ 79 (91)
T d1y14b1 3 KGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLTFNAGSNPPSYQSSEDVITIKSRIRVKIEGCISQVSSIHA 79 (91)
T ss_dssp TTCEEEEEEEEEETTEEEEEETTEEEEEEGGGSCTTCEECC-----CEECSSCEECTTCEEEEEEEEEEEETTEEEE
T ss_pred CCCEEEEEEEEEEeeEEEEEEcCeEEEEEhhhcCcceEEccccceeEecccCeEEeCCCEEEEEEEEEecccCccEE
Confidence 59999999999999999999999999999999987643 23455699999999999999999998754
No 40
>d2c35b1 b.40.4.5 (B:78-171) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.30 E-value=7.2e-07 Score=83.38 Aligned_cols=68 Identities=21% Similarity=0.326 Sum_probs=58.3
Q ss_pred cceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCC-Cc----------cccccCCCCCCEEEEEEEEeecCCCeEEE
Q psy14505 1428 KGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTD-PG----------EEIIRNFKKGDEIEAIILSIDVEKERISL 1496 (1619)
Q Consensus 1428 vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~-~~----------~~~~~~f~vGq~V~~~Vl~vd~e~~ri~L 1496 (1619)
.|+++.|+|++++++|+||++ +.++|+||.+++.++. +. .+....|++||.|++||++++.+.+++..
T Consensus 4 ~Gev~~g~V~~v~~~G~fv~l-g~~~~~v~~~~l~~d~~y~~~~~~~~~~~~~~~~~~~~Gd~VrvkV~~v~~~~~~I~~ 82 (94)
T d2c35b1 4 KGEVVDAVVTQVNKVGLFTEI-GPMSCFISRHSIPSEMEFDPNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFA 82 (94)
T ss_dssp TTCEEEEEEEEEETTEEEEEE-TTEEEEEEGGGSCTTEEEESSSSSCEEEETTSCSEEETTCEEEEEEEEEEEETTEEEE
T ss_pred CCCEEEEEEEEEEeeEEEEEe-cCceEEEEhhhcCcceeecccccceEEEcccceEEEeCCCEEEEEEEEEecCcCcceE
Confidence 499999999999999999999 5799999999999642 11 23345799999999999999999999863
No 41
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.27 E-value=1.1e-06 Score=93.59 Aligned_cols=175 Identities=14% Similarity=0.145 Sum_probs=100.2
Q ss_pred cccEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccc
Q psy14505 858 YIPVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNV 937 (1619)
Q Consensus 858 ~~~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 937 (1619)
...+|.+-|++||||+|.++.||+++|++|+++|.|+|+... +.+-.. ...+........+
T Consensus 7 ~~~iI~i~GppGSGKsT~a~~La~~~g~~~is~gdl~R~~~~---~~~~~~--~~~i~~~~~~~~~-------------- 67 (196)
T d1ukza_ 7 QVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQG---RAGSQY--GELIKNCIKEGQI-------------- 67 (196)
T ss_dssp TCEEEEEECSTTSSHHHHHHHHHHHSSCEEEEHHHHHHHHHH---STTCSC--HHHHHHHHHTTCC--------------
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHhCCeEEehhHHHHHHhh---hcccHH--HHHHHHhhhcccc--------------
Confidence 345778889999999999999999999999999999995332 222211 1122111111000
Q ss_pred cccccccccccccccccccHHHHHHHH-HHHHhh-hcCCCeEEeccccC-------eeeecCCCeEEEEEcCHHHHHHhc
Q psy14505 938 TTLIRNEKVSNNASKIAKFKNIRKELF-KIQVKF-RKFPGLVADGRDMG-------TTVFPDAFLKIFLTADIKQRTKRR 1008 (1619)
Q Consensus 938 ~~~ir~~~~~~~~s~~a~~~~vr~~~~-~~~r~~-a~~~~~V~~GRd~~-------~~v~p~a~~kifl~A~~e~Ra~Rr 1008 (1619)
+.. ..+...+. ...+.. ....++|++|-... .-.+...+..|||.++.+...+|.
T Consensus 68 ---------------~~~-~~~~~~~~~~~~~~~~~~~~~~vl~g~p~~~~q~~~~~~~~~~~~~~i~l~~~~e~~~~R~ 131 (196)
T d1ukza_ 68 ---------------VPQ-EITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLERL 131 (196)
T ss_dssp ---------------CCH-HHHHHHHHHHHHHHHHTTCCEEEEETCCCSHHHHHHHHHHTCCCSEEEEEECCHHHHHHHH
T ss_pred ---------------ccc-hhHHHHHHHHHHhhhccCCCceeeeccchhHHHHHHHHHhccccceeeccCCCHHHHHHHH
Confidence 000 01111111 112222 23457888883111 001223468999999999999997
Q ss_pred hHHHHhc-CCCCCHHHHHHHHHhhhhhcccCCCCC----CCCCCCceEEccCcccchhhhhhhhhhhhhh
Q psy14505 1009 YKQLMQK-GFSVSMSDLLINLIKRDIRDKTRNLSP----LKCPEQAHLLNTSKMNINQVVNQILDCFATL 1073 (1619)
Q Consensus 1009 ~~~l~~~-~~~~~~~~~~~~i~~rD~~d~~r~~~~----l~~~~dal~Idts~l~ieevv~~I~~~i~~l 1073 (1619)
..+.... ....+.+.+.+.+.. ... ...| |+.....+.||++. ++|+|.+.|++.+++.
T Consensus 132 ~~~~~~~~r~~~~~e~~~~r~~~--y~~---~~~~l~~~y~~~~~~~~Id~~~-s~eeV~~~I~~~i~~~ 195 (196)
T d1ukza_ 132 LERGKTSGRSDDNIESIKKRFNT--FKE---TSMPVIEYFETKSKVVRVRCDR-SVEDVYKDVQDAIRDS 195 (196)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHH--HHH---TTHHHHHHHHTTTCEEEEECSS-CHHHHHHHHHHHHHHH
T ss_pred HhccccccccchHHHHHHHHHHH--HHH---HHHHHHHHHHhcCCEEEEECCC-CHHHHHHHHHHHHHhh
Confidence 6653322 233455555554432 111 1222 23344457899875 9999999998877653
No 42
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=98.21 E-value=1.6e-06 Score=92.19 Aligned_cols=174 Identities=17% Similarity=0.197 Sum_probs=93.5
Q ss_pred ccEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCcccc
Q psy14505 859 IPVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVT 938 (1619)
Q Consensus 859 ~~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 938 (1619)
..+|.+-|++||||+|.++.||+++|++|+++|.++|. +.+.+... ...+........+.
T Consensus 6 p~iI~i~G~pGSGKsT~a~~La~~~g~~~i~~g~~~r~----~~~~~~~~--~~~~~~~~~~~~~~-------------- 65 (194)
T d1qf9a_ 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQ----EQQSGSKD--GEMIATMIKNGEIV-------------- 65 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHCCEEEEHHHHHHH----HHHTTCTT--HHHHHHHHHTTCCC--------------
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHCCceEchhhHHHH----Hhhhhhhh--hhhhhhHhhhcccc--------------
Confidence 35788889999999999999999999999999999993 33444322 12222221111100
Q ss_pred ccccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccCe--e-----e---ecCCCeEEEEEcCHHHHHHhc
Q psy14505 939 TLIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGT--T-----V---FPDAFLKIFLTADIKQRTKRR 1008 (1619)
Q Consensus 939 ~~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~--~-----v---~p~a~~kifl~A~~e~Ra~Rr 1008 (1619)
+. ..+-..+...... ....+.|++|-.... . . +..-++.|||+||+++..+|.
T Consensus 66 ---------------~~-~~~~~~~~~~~~~-~~~~~~i~dg~p~~~~~~~~l~~~~~~~~~~~~vi~l~~~~~~~~~R~ 128 (194)
T d1qf9a_ 66 ---------------PS-IVTVKLLKNAIDA-NQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRL 128 (194)
T ss_dssp ---------------CH-HHHHHHHHHHHHT-STTCCEEEETCCCSHHHHHHHHHHHTTTCEEEEEEEEECCHHHHHHHH
T ss_pred ---------------ch-HHHHHHHHHHhhh-hhcCCeEEEecchhhhhHHHHHhhhhhcccccEEEEeecchHHHHHHH
Confidence 00 0111111111111 223456776621000 0 0 011237799999999999995
Q ss_pred hHHHHhcC-CCCCHHHHHHHHHhhhhhcccCC-CCCCCCCCCceEEccCcccchhhhhhhhhhhhh
Q psy14505 1009 YKQLMQKG-FSVSMSDLLINLIKRDIRDKTRN-LSPLKCPEQAHLLNTSKMNINQVVNQILDCFAT 1072 (1619)
Q Consensus 1009 ~~~l~~~~-~~~~~~~~~~~i~~rD~~d~~r~-~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ 1072 (1619)
..+-.... ...+.+.+.+.++. ....... ...|+...+.++||++ .++|+|.+.|.+.++.
T Consensus 129 ~~~~~~~~~~~d~~e~~~~Rl~~--y~~~~~~~~~~y~~~~~~~~Id~~-~~ieeV~~~I~~ii~~ 191 (194)
T d1qf9a_ 129 LKRGESSGRSDDNIESIKKRFNT--FNVQTKLVIDHYNKFDKVKIIPAN-RDVNEVYNDVENLFKS 191 (194)
T ss_dssp HHHHTTSCCTTCSHHHHHHHHHH--HHHTHHHHHHHHHHTTCEEEEECS-SCHHHHHHHHHHHHHH
T ss_pred HhhccccccccccHHHHHHHHHH--HHHHHHHHHHHHHhCCCEEEEECC-CCHHHHHHHHHHHHHH
Confidence 44422111 22244444443322 1110000 1123444556789976 4999999998776654
No 43
>d2c35b1 b.40.4.5 (B:78-171) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.16 E-value=3.2e-06 Score=78.83 Aligned_cols=67 Identities=19% Similarity=0.312 Sum_probs=58.4
Q ss_pred CCcEEEEEEEEEecCeEEEEeCCEEEEeeccccCcccc------------CCCccccccCCEEEEEEEEeecCCCeEEE
Q psy14505 1256 EGCTVKGVVKNITDYGAFIDLGGIDGLLHITDIAWRRV------------KHPSEILTIGQDISTKILKYDQEKNRVSL 1322 (1619)
Q Consensus 1256 ~G~iv~g~V~~v~~~G~~V~l~gi~g~l~~sels~~~~------------~~~~~~~~vG~~v~vrVl~vd~~~~~i~L 1322 (1619)
.|+++.|+|++++++|+||+++.++||+|.++|++... .+....|++|+.|++||+.++.+.+++.+
T Consensus 4 ~Gev~~g~V~~v~~~G~fv~lg~~~~~v~~~~l~~d~~y~~~~~~~~~~~~~~~~~~~~Gd~VrvkV~~v~~~~~~I~~ 82 (94)
T d2c35b1 4 KGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFA 82 (94)
T ss_dssp TTCEEEEEEEEEETTEEEEEETTEEEEEEGGGSCTTEEEESSSSSCEEEETTSCSEEETTCEEEEEEEEEEEETTEEEE
T ss_pred CCCEEEEEEEEEEeeEEEEEecCceEEEEhhhcCcceeecccccceEEEcccceEEEeCCCEEEEEEEEEecCcCcceE
Confidence 59999999999999999999999999999999998642 23345689999999999999999888753
No 44
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=98.16 E-value=1.2e-06 Score=91.19 Aligned_cols=151 Identities=13% Similarity=0.208 Sum_probs=83.3
Q ss_pred ecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccccccccc
Q psy14505 864 IDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTTLIRN 943 (1619)
Q Consensus 864 i~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ir~ 943 (1619)
+-|++|+||+|+++.||++||++|+|++.+.+. ..|.+..+. +.+.
T Consensus 7 l~G~~GsGKSTia~~LA~~Lg~~~id~D~~ie~------~~g~~i~ei--~~~~-------------------------- 52 (170)
T d1e6ca_ 7 MVGARGCGMTTVGRELARALGYEFVDTDIFMQH------TSGMTVADV--VAAE-------------------------- 52 (170)
T ss_dssp EESCTTSSHHHHHHHHHHHHTCEEEEHHHHHHH------HHCSCHHHH--HHHH--------------------------
T ss_pred EECCCCCCHHHHHHHHHHHhCCCEEehhhhhhh------hhhhhhhhh--hccc--------------------------
Confidence 449999999999999999999999999877652 234432211 0000
Q ss_pred cccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccCeeeec-------CCCeEEEEEcCHHHHHHhchHHHHhcC
Q psy14505 944 EKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGTTVFP-------DAFLKIFLTADIKQRTKRRYKQLMQKG 1016 (1619)
Q Consensus 944 ~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~~v~p-------~a~~kifl~A~~e~Ra~Rr~~~l~~~~ 1016 (1619)
-.+..++...+...+......++..|- +.+..+ .....|||+||++.+.+|...+.....
T Consensus 53 -----------g~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~v~L~~~~e~l~~Rl~~~~~~~~ 119 (170)
T d1e6ca_ 53 -----------GWPGFRRRESEALQAVATPNRVVATGG--GMVLLEQNRQFMRAHGTVVYLFAPAEELALRLQASLQAHQ 119 (170)
T ss_dssp -----------HHHHHHHHHHHHHHHHCCSSEEEECCT--TGGGSHHHHHHHHHHSEEEEEECCHHHHHHHHHHHHCSCC
T ss_pred -----------chHHHHHHHHHHHHhhccccceecccc--cchhhhHHHHhhhccceeEEEecCchhHHHHHhhcccccc
Confidence 011223333333333334433443332 211111 123569999999999999443322111
Q ss_pred -CCCCHHHHHHHH----HhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhh
Q psy14505 1017 -FSVSMSDLLINL----IKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFA 1071 (1619)
Q Consensus 1017 -~~~~~~~~~~~i----~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~ 1071 (1619)
.........+.+ .+|+.. |. ....++|||+. +++++++.|++.++
T Consensus 120 r~~~~~~~~~~~~~~~~~er~~l--------Y~-~~a~~~Id~~~-~~~eiv~~Ii~~Lr 169 (170)
T d1e6ca_ 120 RPTLTGRPIAEEMEAVLREREAL--------YQ-DVAHYVVDATQ-PPAAIVCELMQTMR 169 (170)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHH--------HH-HHCSEEEETTS-CHHHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHH--------HH-HcCCEEEcCCC-CHHHHHHHHHHHcC
Confidence 223333333333 333321 11 11237899885 99999998877543
No 45
>d2nn6g1 b.40.4.5 (G:107-194) S1-domain of exosome component 3 (RRP40) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.16 E-value=1.7e-06 Score=79.18 Aligned_cols=73 Identities=12% Similarity=0.036 Sum_probs=65.1
Q ss_pred cccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCccccCCCccccccCCCEEEEEEEEeecccceEEEeeecc
Q psy14505 1339 YPRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEINEERRRISLGMKQC 1414 (1619)
Q Consensus 1339 l~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK~~ 1414 (1619)
.++||+|-|+|+++..+|+||+++....|++|.+++.+ ...+.+..+++||.|.|+|.+++ ..+.+.||+..+
T Consensus 4 P~~GD~ViG~V~~~~~~~~~VdI~s~~~a~L~~~~f~g--~~k~~r~~l~~GD~V~arV~~v~-~~~~~~Lscvd~ 76 (88)
T d2nn6g1 4 PVKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLSFEG--ATKRNRPNVQVGDLIYGQFVVAN-KDMEPEMVCIDS 76 (88)
T ss_dssp CCSSEEEEEEEEEEETTEEEEECSSSSCCCEESCSSSC--CSSCSSSSSCTTCEEEEEEEECC-TTSCCEEECSBT
T ss_pred CCCCCEEEEEEEEEeCCeEEEEcCCCeeEEEeHHHcCc--cccccCcccCCCCEEEEEEEEeC-CCCCEEEEEEcc
Confidence 57899999999999999999999999999999999976 35667788999999999999999 457899998654
No 46
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=98.14 E-value=9.8e-07 Score=93.54 Aligned_cols=171 Identities=18% Similarity=0.104 Sum_probs=95.3
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCcccccc
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTTL 940 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 940 (1619)
.|.+-|++||||+|.++.||+++|++|+++|.|+|..+. .+-. ....+..... +|.-+
T Consensus 5 riil~G~pGSGKsT~a~~La~~~g~~~i~~gdllr~~~~----~~~~--~g~~~~~~~~-------------~g~~~--- 62 (190)
T d1ak2a1 5 RAVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVA----SGSE--LGKKLKATMD-------------AGKLV--- 62 (190)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHHH----HTCH--HHHHHHHHHH-------------TTCCC---
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCeEEeHHHHHHHHHh----ccCc--ccchhhhhhc-------------cCCcc---
Confidence 344569999999999999999999999999999995432 1110 0011111111 01111
Q ss_pred ccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccC---------eeee--cCCCeEEEEEcCHHHHHHhch
Q psy14505 941 IRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMG---------TTVF--PDAFLKIFLTADIKQRTKRRY 1009 (1619)
Q Consensus 941 ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~---------~~v~--p~a~~kifl~A~~e~Ra~Rr~ 1009 (1619)
....+...+...+.....+.++|++|-... .+.. ....+.+++.++.+.+.+|..
T Consensus 63 --------------~~~~v~~~~~~~l~~~~~~~g~ii~g~pr~~~qa~~l~~~~~~~~~~~~~~~~l~v~~~~~~~r~~ 128 (190)
T d1ak2a1 63 --------------SDEMVLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRIT 128 (190)
T ss_dssp --------------CHHHHHHHHHHHHTSGGGTTCEEEESCCCSHHHHHHHHHHHHHHTCCCCEEEEEECCHHHHHHHHH
T ss_pred --------------ccceeeeeehhhhccccccCceeecccccchhHHHHHHHHhhhccccccccccccchHHHHHhhhc
Confidence 111233333344445556678999983110 0000 112478999999999999844
Q ss_pred HHHHhcCCCCCHHHHHHHHHhhhhhcccCC-CCCCCCCCCceEEccCcccchhhhhhhhhhhhh
Q psy14505 1010 KQLMQKGFSVSMSDLLINLIKRDIRDKTRN-LSPLKCPEQAHLLNTSKMNINQVVNQILDCFAT 1072 (1619)
Q Consensus 1010 ~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~-~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ 1072 (1619)
.+.. ....+.+.+.+.++.-.+. ... ...|......+.||++. ++|+|.+.|++.+.+
T Consensus 129 ~r~~--~~d~~~e~i~~R~~~y~~~--~~p~~~~y~~~~~~~~Id~~~-s~eeV~~~I~~~l~k 187 (190)
T d1ak2a1 129 GRLI--HSDDNKKALKIRLEAYHTQ--TTPLVEYYSKRGIHSAIDASQ-TPDVVFASILAAFSK 187 (190)
T ss_dssp TCEE--CCCCCHHHHHHHHHHHHHH--HHHHHHHHHHTTCEEEEETTS-CHHHHHHHHHHHHHH
T ss_pred cCCC--CCchhhHHHHHHHHHHHHH--HHHHHHHHHhcCCEEEEECCC-CHHHHHHHHHHHHHH
Confidence 3311 1233555554433221111 000 01122223347899876 999999999876654
No 47
>d2nn6g1 b.40.4.5 (G:107-194) S1-domain of exosome component 3 (RRP40) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.12 E-value=2.4e-06 Score=78.28 Aligned_cols=72 Identities=13% Similarity=0.118 Sum_probs=64.9
Q ss_pred ccceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCCCccccccCCCCCCEEEEEEEEeecCCCeEEEeeecC
Q psy14505 1427 KKGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTDPGEEIIRNFKKGDEIEAIILSIDVEKERISLGIKQL 1501 (1619)
Q Consensus 1427 ~vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LSlK~~ 1501 (1619)
++||+|-|+|++++.+|+||.+.....|++|.+++.+ ..++....|++||.|.|+|.++| ..+++.||+...
T Consensus 5 ~~GD~ViG~V~~~~~~~~~VdI~s~~~a~L~~~~f~g--~~k~~r~~l~~GD~V~arV~~v~-~~~~~~Lscvd~ 76 (88)
T d2nn6g1 5 VKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLSFEG--ATKRNRPNVQVGDLIYGQFVVAN-KDMEPEMVCIDS 76 (88)
T ss_dssp CSSEEEEEEEEEEETTEEEEECSSSSCCCEESCSSSC--CSSCSSSSSCTTCEEEEEEEECC-TTSCCEEECSBT
T ss_pred CCCCEEEEEEEEEeCCeEEEEcCCCeeEEEeHHHcCc--cccccCcccCCCCEEEEEEEEeC-CCCCEEEEEEcc
Confidence 5799999999999999999999999999999999964 55677888999999999999999 468999998654
No 48
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=98.10 E-value=2.2e-06 Score=88.87 Aligned_cols=159 Identities=18% Similarity=0.159 Sum_probs=88.8
Q ss_pred cccEEEecCCcCCCCchhHHHHHHHhC-CEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCcc
Q psy14505 858 YIPVITIDGPTASGKGTVAQLVASKLG-FHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVN 936 (1619)
Q Consensus 858 ~~~iIti~g~~gsGK~~~~~~la~~l~-~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1619)
..+.|.+.|++|+||+|+++.||++++ +.+++.+.+.+ +........... +
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~-------------------~-- 55 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVK-------ENHFYTEYDTEL-------------------D-- 55 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHSTTEEEEEHHHHHH-------HTTCSCC---------------------------
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHhCCCcEEeHHHHHH-------HHhhhhhHHHhh-------------------c--
Confidence 345788889999999999999999996 67776655544 221111100000 0
Q ss_pred ccccccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccCeeeecCCCeEEEEEcCHHHHHHhchHHHHhcC
Q psy14505 937 VTTLIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGTTVFPDAFLKIFLTADIKQRTKRRYKQLMQKG 1016 (1619)
Q Consensus 937 v~~~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~~v~p~a~~kifl~A~~e~Ra~Rr~~~l~~~~ 1016 (1619)
+.......+...+...+..+...+++++++.....+-....++.|||+||++++.+| +..++
T Consensus 56 --------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~vI~L~~~~e~l~~R----l~~R~ 117 (174)
T d1y63a_ 56 --------------THIIEEKDEDRLLDFMEPIMVSRGNHVVDYHSSELFPERWFHMVVVLHTSTEVLFER----LTKRQ 117 (174)
T ss_dssp --------------CCCCCHHHHHHHHHHHHHHHTSSSEEEEECSCCTTSCGGGCSEEEEEECCHHHHHHH----HHHTT
T ss_pred --------------ccchHHHHHHHHHHHHHhhhhhcccccccHHHHHHHHHhcCceEEEEECCHHHHHHH----HHhCC
Confidence 001111122223333445556667888888755533333355889999999999999 33344
Q ss_pred CCCCHHHHHHH----HHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhh
Q psy14505 1017 FSVSMSDLLIN----LIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCF 1070 (1619)
Q Consensus 1017 ~~~~~~~~~~~----i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i 1070 (1619)
. ....+..+ +..+-..+. ...| ..+++||+++.+++++++.|.+.+
T Consensus 118 ~--~~~~~~~~~~~e~~~~~~~~~---~~~~---~~~~~i~~~~~t~ee~~~~V~~I~ 167 (174)
T d1y63a_ 118 Y--SEAKRAENMEAEIQCICEEEA---RDAY---EDDIVLVRENDTLEQMAATVEEIR 167 (174)
T ss_dssp C--CHHHHHHHHHHHHTTHHHHHH---HHHS---CGGGEEEEECSSHHHHHHHHHHHH
T ss_pred C--cccccccchhhhhhhhhHHHH---HHhh---cCCEEEECCCCCHHHHHHHHHHHH
Confidence 3 22222221 111111111 0112 234788888899999877765543
No 49
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=98.02 E-value=3.5e-06 Score=86.98 Aligned_cols=35 Identities=37% Similarity=0.601 Sum_probs=32.2
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEechhhHHH
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLDSGALYR 895 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr 895 (1619)
.|.+.|++|+||+|+++.||+++|++++|+|.+++
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~~i~~~~~~~ 40 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 40 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCEEEEHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcEEechHHHH
Confidence 46677999999999999999999999999988877
No 50
>d1hh2p1 b.40.4.5 (P:127-198) S1 domain of NusA {Thermotoga maritima [TaxId: 2336]}
Probab=98.01 E-value=1.2e-05 Score=70.48 Aligned_cols=63 Identities=16% Similarity=0.222 Sum_probs=56.0
Q ss_pred CCCcEEEEEEEEEecCeEEEEeCCEEEEeeccccCccccCCCccccccCCEEEEEEEEeecCCC--eEEEe
Q psy14505 1255 KEGCTVKGVVKNITDYGAFIDLGGIDGLLHITDIAWRRVKHPSEILTIGQDISTKILKYDQEKN--RVSLG 1323 (1619)
Q Consensus 1255 ~~G~iv~g~V~~v~~~G~~V~l~gi~g~l~~sels~~~~~~~~~~~~vG~~v~vrVl~vd~~~~--~i~LS 1323 (1619)
+.|++++|+|.++.+.+++|++++.+|+||.++.. |.+.|++|+.++|.|.+++...+ ++.||
T Consensus 7 ~~geiv~G~V~r~~~~~~~Vdlg~~eaiLp~~eqi------p~E~~~~Gdrik~~i~~V~~~~kgpqI~lS 71 (72)
T d1hh2p1 7 LKGTVTTAEVIRVMGEWADIRIGKLETRLPKKEWI------PGEEIKAGDLVKVYIIDVVKTTKGPKILVS 71 (72)
T ss_dssp CTTCEEEEEEEEECSSEEEEEETTEEEEEEGGGSC------TTCCCCTTCEEEEEEEEEEEETTEEEEEEE
T ss_pred ccCcEEEEEEEEEcCCCEEEEECCcEEECCHHHcC------CCCCCCCCCEEEEEEEEEEEcCCCCeEEEe
Confidence 68999999999999999999999999999999875 67889999999999999986654 46665
No 51
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=98.01 E-value=4.7e-06 Score=86.17 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=27.3
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEech
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDS 890 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dt 890 (1619)
.+|.+.|++|+||+|+++.|+++++.++++.
T Consensus 4 kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~ 34 (178)
T d1qhxa_ 4 RMIILNGGSSAGKSGIVRCLQSVLPEPWLAF 34 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHSSSCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCeEEe
Confidence 4678889999999999999999999887653
No 52
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.00 E-value=4.8e-06 Score=89.79 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=66.7
Q ss_pred CCCeEEecccc--CeeeecCCCeEEEEEcCHHHHHHhchHHHH-hcCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCc
Q psy14505 973 FPGLVADGRDM--GTTVFPDAFLKIFLTADIKQRTKRRYKQLM-QKGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQA 1049 (1619)
Q Consensus 973 ~~~~V~~GRd~--~~~v~p~a~~kifl~A~~e~Ra~Rr~~~l~-~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~da 1049 (1619)
..-++++|-.+ ...+.+..+++|||+||++.|.+||..+-. .+| .+.+++.+...++...+..+.+.|+....|.
T Consensus 111 ~~~iiveg~~~l~~~~l~~~~D~~i~v~~~~~~~~~R~~~Rd~~~rg--~~~e~~~~~~~~~~~~~~~~~i~p~k~~ADl 188 (213)
T d1uj2a_ 111 ADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERG--RDLEQILSQYITFVKPAFEEFCLPTKKYADV 188 (213)
T ss_dssp CSEEEEECTTTTSSHHHHHHCSEEEEEECCHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHTHHHHHHHHTGGGGGGCSE
T ss_pred cceEEecchhhhccHHHHhhhheeeeecCCHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHhHHHHHHHhhhhHhcCCE
Confidence 34588888643 223445578999999999999999988733 344 4888888888887776666667787766665
Q ss_pred eEEccCcccchhhhhhhhhhhhhhhh
Q psy14505 1050 HLLNTSKMNINQVVNQILDCFATLFK 1075 (1619)
Q Consensus 1050 l~Idts~l~ieevv~~I~~~i~~ll~ 1075 (1619)
+|+.+. +....++.|.+.++.+++
T Consensus 189 -Ii~~~~-d~~~~i~~i~~~I~~ll~ 212 (213)
T d1uj2a_ 189 -IIPRGA-DNLVAINLIVQHIQDILN 212 (213)
T ss_dssp -EEETGG-GCHHHHHHHHHHHHHHHH
T ss_pred -EEeCCC-ccHHHHHHHHHHHHHHhC
Confidence 454432 223346666666665553
No 53
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=97.98 E-value=2.8e-06 Score=91.28 Aligned_cols=186 Identities=12% Similarity=0.118 Sum_probs=95.6
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccccc
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTT 939 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 939 (1619)
++|.+.|..||||+|+++.+. .+|++++|++.++|.+ .+.+ ...........+... ..-||..-..
T Consensus 3 ~iIgITG~igSGKStv~~~l~-~~G~~vidaD~i~~~l----~~~~-----~~~~~~i~~~~~~~~----~~~d~~i~r~ 68 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIANLFT-DLGVPLVDADVVAREV----VAKD-----SPLLSKIVEHFGAQI----LTEQGELNRA 68 (205)
T ss_dssp EEEEEECSTTSCHHHHHHHHH-TTTCCEEEHHHHHHHT----TCSS-----CHHHHHHHHHHCTTC----C------CHH
T ss_pred EEEEEECCCCCCHHHHHHHHH-HCCCeEEEchHHHHHH----Hhcc-----chhHHHHHHhcccce----ecCCCcccHH
Confidence 578899999999999999775 6899999999998832 1111 111111111111110 0011111111
Q ss_pred cccccccccccc----cccccHHHHHHHHHHHHhhhcCCCeEEeccccCe-eeecCCCeEEEEEcCHHHHHHhchHHHHh
Q psy14505 940 LIRNEKVSNNAS----KIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGT-TVFPDAFLKIFLTADIKQRTKRRYKQLMQ 1014 (1619)
Q Consensus 940 ~ir~~~~~~~~s----~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~-~v~p~a~~kifl~A~~e~Ra~Rr~~~l~~ 1014 (1619)
.|+..-...... .-..+|.+++.+.+...+ ....-+|+|+...-. -.....+..||++||++.|.+|+.
T Consensus 69 ~l~~~vf~~~~~~~~l~~i~hp~v~~~~~~~~~~-~~~~~vv~e~~ll~e~~~~~~~d~ii~v~~~~~~r~~R~~----- 142 (205)
T d1jjva_ 69 ALRERVFNHDEDKLWLNNLLHPAIRERMKQKLAE-QTAPYTLFVVPLLIENKLTALCDRILVVDVSPQTQLARSA----- 142 (205)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-CCSSEEEEECTTTTTTTCGGGCSEEEEEECCHHHHHHHHC-----
T ss_pred HHhhhhhhhhhhhhHhhcccCHHHHHHHHHHHhh-ccCCeEEEEeccccccchhhhhhheeeecchHHHHHHHHH-----
Confidence 122211111111 112577777776654443 233346777753211 112234689999999999999944
Q ss_pred cCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhhhh
Q psy14505 1015 KGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFATL 1073 (1619)
Q Consensus 1015 ~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~l 1073 (1619)
++.+.+.+++.+.++..-..+..+ ...| ++|+++. ++++..+.+.+.+.++
T Consensus 143 ~R~~~s~e~~~~~~~~Q~~~~~k~------~~aD-~vI~N~~-~l~~~~~~l~~~i~~i 193 (205)
T d1jjva_ 143 QRDNNNFEQIQRIMNSQVSQQERL------KWAD-DVINNDA-ELAQNLPHLQQKVLEL 193 (205)
T ss_dssp -----CHHHHHHHHHHSCCHHHHH------HHCS-EEEECCS-CHHHHHHHHHHHHHHH
T ss_pred hcCCchHHHHHHHHHhCCCHHHHH------HhCC-EEEECCC-ChHHHHHHHHHHHHHH
Confidence 334568888888766431111111 1123 4566554 6666666555544444
No 54
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.97 E-value=5.6e-06 Score=85.73 Aligned_cols=158 Identities=15% Similarity=0.105 Sum_probs=84.3
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEech-hhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCcccc
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDS-GALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVT 938 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dt-g~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 938 (1619)
.+|.+.|++|+||+|+++.|++++|+++++. +..+|... ...........
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~~~~~---~~~~~~~~~~~-------------------------- 55 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWGYI---KHGRIDPWLPQ-------------------------- 55 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHHHHTC---CSSCCCTTSSS--------------------------
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHHHHHHH---hcCCcccccch--------------------------
Confidence 3688889999999999999999999998753 33444100 01111110000
Q ss_pred ccccccccccccccccccHHHHHHHHHHH-HhhhcCCCeEEeccccCeeee-----cCCCeEEEEEcCHHHHHHhchHHH
Q psy14505 939 TLIRNEKVSNNASKIAKFKNIRKELFKIQ-VKFRKFPGLVADGRDMGTTVF-----PDAFLKIFLTADIKQRTKRRYKQL 1012 (1619)
Q Consensus 939 ~~ir~~~~~~~~s~~a~~~~vr~~~~~~~-r~~a~~~~~V~~GRd~~~~v~-----p~a~~kifl~A~~e~Ra~Rr~~~l 1012 (1619)
+ ............... ..++....+|++|.--..... +.....|||+|+++++.+|..
T Consensus 56 ------------~-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~i~l~~~~e~~~~R~~--- 119 (176)
T d1zp6a1 56 ------------S-HQQNRMIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLHYIVLRTTAAEAIERCL--- 119 (176)
T ss_dssp ------------H-HHHHHHHHHHHHHHHHHHHHTSCEEEECSCCCTTTTHHHHTTCSCEEEEEEECCHHHHHHHHH---
T ss_pred ------------h-hhHHHHHHHHHHHHHHHHHhcCCCeEecccccHHHHHHHHhcccccccccCCCCHHHHHHHHH---
Confidence 0 000001111111112 223344567777631111110 111266999999999999933
Q ss_pred HhcCCC-CCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhhh
Q psy14505 1013 MQKGFS-VSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFAT 1072 (1619)
Q Consensus 1013 ~~~~~~-~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ 1072 (1619)
.++.. ....+....+.++- +. + ...+..+|||++++++++++.|++.++.
T Consensus 120 -~R~~~~~~~~~~~~~~~~~~-----~~---~-~~~~~~~idt~~~~~ee~~~~I~~~l~~ 170 (176)
T d1zp6a1 120 -DRGGDSLSDPLVVADLHSQF-----AD---L-GAFEHHVLPVSGKDTDQALQSAINALQS 170 (176)
T ss_dssp -TTCTTSCCCHHHHHHHHHHT-----TC---C-GGGGGGEEECTTCCTTTTTTTTHHHHHH
T ss_pred -hCCCccccchhhHHHHHHHH-----hh---c-ccccCEEEECCCCCHHHHHHHHHHHHHc
Confidence 23322 12233333332211 11 1 1223478999999999999999887654
No 55
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=97.94 E-value=6.5e-06 Score=87.05 Aligned_cols=180 Identities=19% Similarity=0.198 Sum_probs=99.8
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccccc
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTT 939 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 939 (1619)
++|.+.|..||||+|+++.+ +.+|++++|++.+.+.+ .+.+ ...+..... ....++.--..
T Consensus 4 ~IIgitG~~gSGKstva~~l-~~~g~~~~~~D~~~~~~----~~~~-----~~~~~~~~~---------~~~~~~~~~~~ 64 (191)
T d1uf9a_ 4 IIIGITGNIGSGKSTVAALL-RSWGYPVLDLDALAARA----RENK-----EEELKRLFP---------EAVVGGRLDRR 64 (191)
T ss_dssp EEEEEEECTTSCHHHHHHHH-HHTTCCEEEHHHHHHHH----HHHT-----HHHHHHHCG---------GGEETTEECHH
T ss_pred EEEEEECCCCCCHHHHHHHH-HHCCCeEEEccHHHHHh----hhcc-----ccccccccc---------ceeccCchhhh
Confidence 68899999999999999988 56999999998888743 2221 112211110 11122222222
Q ss_pred cccccccccc----cccccccHHHHHHHHHHHHhhhcCCCeEEeccccC-eeeecCCCeEEEEEcCHHHHHHhchHHHHh
Q psy14505 940 LIRNEKVSNN----ASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMG-TTVFPDAFLKIFLTADIKQRTKRRYKQLMQ 1014 (1619)
Q Consensus 940 ~ir~~~~~~~----~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~-~~v~p~a~~kifl~A~~e~Ra~Rr~~~l~~ 1014 (1619)
+|+....... ...-...|.++..+.+..+. .....+++++.... ....+..++.||++||.+.|.+|+ .
T Consensus 65 ~l~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~vi~e~~~~~~~~~~~~~d~vI~v~a~~e~r~~Rl-----~ 138 (191)
T d1uf9a_ 65 ALARLVFSDPERLKALEAVVHPEVRRLLMEELSR-LEAPLVFLEIPLLFEKGWEGRLHGTLLVAAPLEERVRRV-----M 138 (191)
T ss_dssp HHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHT-CCCSEEEEECTTTTTTTCGGGSSEEEEECCCHHHHHHHH-----H
T ss_pred hHHHhhhcCchhhhhhhhhhhHHHHHHHHhhhhh-cccceEEEEeeccccccccccceeEEEEecchhhHHHHH-----H
Confidence 2332211111 11112456666655543333 23345677775422 223344578999999999999993 3
Q ss_pred cCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhhh
Q psy14505 1015 KGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFAT 1072 (1619)
Q Consensus 1015 ~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ 1072 (1619)
++.+.+.+++...+...-..+..+. ..| ++||++. +++++...|.+++++
T Consensus 139 ~R~~~~~~~~~~~~~~q~~~~~~~~------~aD-~vI~N~~-s~~~l~~~v~~il~~ 188 (191)
T d1uf9a_ 139 ARSGLSREEVLARERAQMPEEEKRK------RAT-WVLENTG-SLEDLERALKAVLAE 188 (191)
T ss_dssp TTTCCTTHHHHHHHTTSCCHHHHHH------HCS-EEECCSS-HHHHHHHHHHHHHHS
T ss_pred hcccchHHHHHHHHHhCCCHHHHHH------hCC-EEEECCC-CHHHHHHHHHHHHHH
Confidence 3345687777764433111111111 112 5677664 788777766555443
No 56
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.91 E-value=1e-05 Score=85.40 Aligned_cols=169 Identities=16% Similarity=0.174 Sum_probs=95.0
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccccc
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTT 939 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 939 (1619)
+.|.+.|++||||+|.++.||+++|++|+++|.+.|.... .+. +....+.+.... |.
T Consensus 4 m~I~i~GppGsGKsT~a~~La~~~~~~~is~~~~~~~~~~----~~~--~~~~~~~~~~~~-------------g~---- 60 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIA----AGS--ENGKRAKEFMEK-------------GQ---- 60 (189)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHHHCCEECCHHHHHHHHHH----HTC--HHHHHHHHHHHT-------------TC----
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHCCcEEehhHHHHHhhh----ccc--HHHHHHHHHHhc-------------CC----
Confidence 4577889999999999999999999999999999994432 211 111111111110 00
Q ss_pred cccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccC--e-------eeecCCCeEEEEEcCHHHHHHhchH
Q psy14505 940 LIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMG--T-------TVFPDAFLKIFLTADIKQRTKRRYK 1010 (1619)
Q Consensus 940 ~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~--~-------~v~p~a~~kifl~A~~e~Ra~Rr~~ 1010 (1619)
.+.............+...+...++|++|-... . .+.| ++-|||.||++...+|
T Consensus 61 ------------~~~~~~~~~~~~~~~~~~~~~~~~~vid~~~~~~~q~~~l~~~~~~p--~~~i~L~~~~e~l~~R--- 123 (189)
T d1zaka1 61 ------------LVPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRP--DTFILLDVPDELLVER--- 123 (189)
T ss_dssp ------------CCCHHHHHHHHHHHHHSHHHHHTCEEEESCCCSHHHHHHHHTTTCCC--SEEEEEECCHHHHHHH---
T ss_pred ------------cccceeehhhhhhHhhhcccccCcEEeeccchhhHHHhhhhhccccc--chheeechhhhhhhhh---
Confidence 000001111222233334445567888883111 0 0122 4789999999999999
Q ss_pred HHHhcCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhhhhhhh
Q psy14505 1011 QLMQKGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFATLFKE 1076 (1619)
Q Consensus 1011 ~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ll~e 1076 (1619)
+..+. +.+.+.+.+.. ..+....+.++. ....+.||.+ .++|+|++.|.+.+..++..
T Consensus 124 --~~~~~--~~e~~~~rl~~--y~~~~~~l~~~y-~~~~~~Id~~-~~idev~~~I~~~l~~il~~ 181 (189)
T d1zaka1 124 --VVFDD--TEEKVKLRLET--YYQNIESLLSTY-ENIIVKVQGD-ATVDAVFAKIDELLGSILEK 181 (189)
T ss_dssp --HTTTC--CTTHHHHHHHH--HHHHHHHHHHTT-CCCEEEEECS-SCHHHHHHHHHHHHHHHHHH
T ss_pred --ccccc--hHHHHHHHHHH--HHHHHHHHHHHh-CCCEEEEECC-CCHHHHHHHHHHHHHHHhhh
Confidence 32222 33344333322 111111111111 1335789976 59999999999888777653
No 57
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.89 E-value=5.2e-07 Score=92.28 Aligned_cols=70 Identities=14% Similarity=0.093 Sum_probs=39.4
Q ss_pred CeEEEEEcCHHHHHHhchHHHHh---cCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhh
Q psy14505 992 FLKIFLTADIKQRTKRRYKQLMQ---KGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILD 1068 (1619)
Q Consensus 992 ~~kifl~A~~e~Ra~Rr~~~l~~---~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~ 1068 (1619)
.+.+|+.+++.+...|...+-.. .......+.+.+...+|...=. ...+++|||++++++|+++.|++
T Consensus 96 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~---------~~~d~~Idt~~~s~ee~v~~Ii~ 166 (169)
T d1kaga_ 96 GVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYE---------EIADVTIRTDDQSAKVVANQIIH 166 (169)
T ss_dssp SEEEECCCCHHHHHSCC------CCSSSSCCCHHHHHHHHHHHHHHHH---------HHCSEEC-----CHHHHHHHHHH
T ss_pred ceeeeccCcHHHhhhHhhhccccchhcccccchhHHHHHHHHhhhhhh---------ccCCEEEECCCCCHHHHHHHHHH
Confidence 47789999999998886554222 1233455555555555543311 11238899999999999999988
Q ss_pred hh
Q psy14505 1069 CF 1070 (1619)
Q Consensus 1069 ~i 1070 (1619)
++
T Consensus 167 ~l 168 (169)
T d1kaga_ 167 ML 168 (169)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 58
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=97.89 E-value=1e-05 Score=84.40 Aligned_cols=170 Identities=14% Similarity=0.122 Sum_probs=92.0
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhC-----CEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCC
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLG-----FHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNG 934 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~-----~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1619)
.+|.+.|++|+||+|.++.|+++|+ +.++..|..++..+. +...... .
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----------------~-------- 54 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAK---EENLVSD----------------R-------- 54 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEEEHHHHHHHHHH---HTTSCSS----------------G--------
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHcCCCeEEEecCChhHHHHH---HHHhhhh----------------h--------
Confidence 4789999999999999999999885 445556666663332 2222110 0
Q ss_pred ccccccccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccC---ee----------eecCCCeEEEEEcCH
Q psy14505 935 VNVTTLIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMG---TT----------VFPDAFLKIFLTADI 1001 (1619)
Q Consensus 935 ~~v~~~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~---~~----------v~p~a~~kifl~A~~ 1001 (1619)
... .. ................+.++.....++++|.... .. ..+..++.|||.|++
T Consensus 55 ~~~---------~~--~~~~~~~~~~~~~~~~~~~~~~~~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~ 123 (190)
T d1khta_ 55 DQM---------RK--MDPETQKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDLIIVVETTG 123 (190)
T ss_dssp GGG---------SS--CCHHHHHHHHHHHHHHHHHHHTTSCEEEECCSEEEETTEEEESSCHHHHHHHCCSEEEEEECCH
T ss_pred hhh---------hh--hhchhhHHHHHHHHHHHHHHhCCCeEEECCcccchHHHHHHHhhhhhhhhhccccceeeecCCH
Confidence 000 00 0000111122223344455556667787774221 11 122356899999999
Q ss_pred HHHHHhchHHHHhcCCCC-CHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhh
Q psy14505 1002 KQRTKRRYKQLMQKGFSV-SMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFA 1071 (1619)
Q Consensus 1002 e~Ra~Rr~~~l~~~~~~~-~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~ 1071 (1619)
+++++||.++.. ++... +.+.+......+......+ +.+..+ ...+|++++.++|++++.|++.++
T Consensus 124 ~~~~~R~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~v~~~~~~~ee~~~ei~~~lk 190 (190)
T d1khta_ 124 DEILMRRMSDET-RVRDLDTASTIEQHQFMNRCAAMSY--GVLTGA-TVKIVQNRNGLLDQAVEELTNVLR 190 (190)
T ss_dssp HHHHHHHHTSSS-CSSSCCCHHHHHHHHHHHHHHHHHH--HHHHCC-EEEEEECCTTCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcc-ccCCcccHHHHHHHHHHHHHHHHHH--HHhhCC-CeEEEECCCCCHHHHHHHHHHHhC
Confidence 999999776522 23333 3333322111111111111 111111 136688888999999999987653
No 59
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.88 E-value=7.6e-06 Score=85.55 Aligned_cols=168 Identities=13% Similarity=0.112 Sum_probs=90.1
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCcccccc
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTTL 940 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 940 (1619)
.|.+-|++||||+|.++.||+++|++|+++|.++|... +.+- +....+...+....+
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~~~~ll~~~~----~~~~--~~~~~i~~~~~~~~~----------------- 58 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAM----KEGT--PLGLQAKQYMDRGDL----------------- 58 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEHHHHHHHHH----HHTC--HHHHHHHHHHHHTCC-----------------
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceechhHHHHHhh----ccCC--hhhHHHHHHHHcCCe-----------------
Confidence 47788999999999999999999999999999998322 1111 001111111111000
Q ss_pred ccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccCe-----------eeecCCCeEEEEEcCHHHHHHhch
Q psy14505 941 IRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGT-----------TVFPDAFLKIFLTADIKQRTKRRY 1009 (1619)
Q Consensus 941 ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~-----------~v~p~a~~kifl~A~~e~Ra~Rr~ 1009 (1619)
++. ......+.+.........+.+++|-.... ...+..++.+||.++.+...+|+
T Consensus 59 ------------~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~~~R~- 124 (182)
T d1zina1 59 ------------VPD-EVTIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERL- 124 (182)
T ss_dssp ------------CCH-HHHHHHHHHHHTSGGGTTCEEEESCCCSHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHHHH-
T ss_pred ------------ecc-chHHHHHHHHhhchhhhcCcccccccchhHHHHHHHHhhhccCCceeeeeccccccchhhhcc-
Confidence 000 01111111111112223456666631110 01112358899999999999993
Q ss_pred HHHHhcCCCCCHHHHHHHHHhhhhhcccCC-CCCCCCCCCceEEccCcccchhhhhhhhhhhhhhh
Q psy14505 1010 KQLMQKGFSVSMSDLLINLIKRDIRDKTRN-LSPLKCPEQAHLLNTSKMNINQVVNQILDCFATLF 1074 (1619)
Q Consensus 1010 ~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~-~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ll 1074 (1619)
.... +.+.+.+.++. ....... ..-|......+.||++. ++|+|.+.|.+.+..+.
T Consensus 125 ----~~~~--~~e~~~~Rl~~--y~~~~~~l~~~y~~~~~~~~Id~~~-~~eeV~~~I~~~L~~l~ 181 (182)
T d1zina1 125 ----TADD--NEATVANRLEV--NMKQMKPLVDFYEQKGYLRNINGEQ-DMEKVFADIRELLGGLA 181 (182)
T ss_dssp ----HTTC--SHHHHHHHHHH--HHHHHTHHHHHHHHHTCEEEEECSS-CHHHHHHHHHHHHHHHH
T ss_pred ----cccc--chHHHHHHHHH--HHHHHHHHHHHHHhcCCEEEEECCC-CHHHHHHHHHHHHHhcc
Confidence 3222 44555443332 0111000 00022223457899875 99999999988776543
No 60
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=97.86 E-value=3.2e-05 Score=81.63 Aligned_cols=173 Identities=14% Similarity=0.116 Sum_probs=95.0
Q ss_pred cccEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccc
Q psy14505 858 YIPVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNV 937 (1619)
Q Consensus 858 ~~~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 937 (1619)
+++.|.+-|++||||+|.++.||+++|++|+|+|.++|... +..- .....+.+.... |.-
T Consensus 5 r~mrIiliG~PGSGKtT~a~~La~~~g~~~is~gdllr~~~----~~~~--~~~~~~~~~~~~-------------~~~- 64 (189)
T d2ak3a1 5 RLLRAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNM----LRGT--EIGVLAKTFIDQ-------------GKL- 64 (189)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHBCCEEEEHHHHHHHHH----HTTC--HHHHHHHHHHHT-------------TCC-
T ss_pred cceeEEEECCCCCCHHHHHHHHHHHHCCeEEcHHHHHHHHH----Hhhh--hhhHHHHHHhhh-------------hhh-
Confidence 56677788999999999999999999999999999999432 2211 000111111100 000
Q ss_pred cccccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccC--ee-eecC---CCeEEEEEcCHHHHHHhchHH
Q psy14505 938 TTLIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMG--TT-VFPD---AFLKIFLTADIKQRTKRRYKQ 1011 (1619)
Q Consensus 938 ~~~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~--~~-v~p~---a~~kifl~A~~e~Ra~Rr~~~ 1011 (1619)
.....+...+.+.... ....++|++|-... .. .|.. -++.|||+++.+...+|
T Consensus 65 ----------------v~~~~~~~l~~~~~~~-~~~~~~ildGfPr~~~q~~~l~~~~~~~~vi~L~v~~~~l~~R---- 123 (189)
T d2ak3a1 65 ----------------IPDDVMTRLVLHELKN-LTQYNWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQR---- 123 (189)
T ss_dssp ----------------CCHHHHHHHHHHHHHH-HTTSCEEEESCCCSHHHHHHHHTTCCCCEEEEEECCHHHHHHH----
T ss_pred ----------------ccchhhhhhhhhhhhh-hhhcCcccccccchhhHHHHhhhcCcceEEEEEeccchhhhhh----
Confidence 0011122222222222 34567999983211 00 1111 24779999999999888
Q ss_pred HHhcCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhhhhhhhhcc
Q psy14505 1012 LMQKGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFATLFKESLL 1079 (1619)
Q Consensus 1012 l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ll~e~l~ 1079 (1619)
... ..+.+.+.++.....-... ..-|......+.||.+ ++++|.+.|.+.+...+....+
T Consensus 124 -~~~----r~e~~~kr~~~y~~~~~~v-~~~Y~~~~~l~~idg~--~~~eV~~~I~~~i~~~l~~~~~ 183 (189)
T d2ak3a1 124 -LTD----RPETVVKRLKAYEAQTEPV-LEYYRKKGVLETFSGT--ETNKIWPHVYAFLQTKLPQRSQ 183 (189)
T ss_dssp -HTG----SHHHHHHHHHHHHHHHHHH-HHHHHHHTCEEEEECS--SHHHHHHHHHHHHHTTSCBCSC
T ss_pred -ccc----chHHHHHHHHHHHHHHHHH-HHHHHhcCCEEEECCC--ChHHHHHHHHHHHHHHhhcccc
Confidence 222 2344544444332221110 1112222223566765 6899999999888776654333
No 61
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.86 E-value=1.4e-05 Score=82.00 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=31.7
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEechhhHHH
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLDSGALYR 895 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr 895 (1619)
+|.+.|++|+||+|+++.|++.++..++..|..+|
T Consensus 4 lI~i~G~~GsGKTTva~~L~~~~~~~~~~~~d~~~ 38 (176)
T d2bdta1 4 LYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIIN 38 (176)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSSEEEEEHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCCEEEehHHHH
Confidence 57778999999999999999999999988888777
No 62
>d2ja9a1 b.40.4.5 (A:62-151) S1-domain of exosome component 3 (RRP40) {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=97.83 E-value=1.7e-05 Score=72.84 Aligned_cols=73 Identities=8% Similarity=-0.016 Sum_probs=64.6
Q ss_pred ccceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCCCccccccCCCCCCEEEEEEEEeecCCCeEEEeeecC
Q psy14505 1427 KKGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTDPGEEIIRNFKKGDEIEAIILSIDVEKERISLGIKQL 1501 (1619)
Q Consensus 1427 ~vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LSlK~~ 1501 (1619)
++|++|-|+|.++...|+||.+.+...|++|.+...+ ...++....|++||.|.|+|.++|+ ...+.||++..
T Consensus 6 ~~gD~ViG~V~~~~~~~~~vdI~~~~~~~L~~~~~f~-g~~k~~r~~l~~GDlV~arV~~v~~-~~~~~Lsc~~~ 78 (90)
T d2ja9a1 6 SVNDFVIGVIIGTFSDSYKVSLQNFSSSVSLSYMAFP-NASKKNRPTLQVGDLVYARVCTAEK-ELEAEIECFDS 78 (90)
T ss_dssp CTTCEEEEEEEEECSSEEEEESSTTSCCEEEETTSST-TCCSSSCCCCCTTCEEEEEEEECCT-TSCCEEESSCT
T ss_pred CCCCEEEEEEEEEeCCcEEEEcCCcchhhhhhhhccC-ccccccCCccCCCCEEEEEEEEECC-CCCEEEEEecc
Confidence 5799999999999999999999888999999888774 5667778889999999999999994 57899998653
No 63
>d1hh2p1 b.40.4.5 (P:127-198) S1 domain of NusA {Thermotoga maritima [TaxId: 2336]}
Probab=97.80 E-value=5.2e-05 Score=66.24 Aligned_cols=59 Identities=14% Similarity=0.129 Sum_probs=52.6
Q ss_pred ccceEEEEEEEEEecceEEEeeCCCeEEEEeCCCCCCCCCccccccCCCCCCEEEEEEEEeecCCCe
Q psy14505 1427 KKGEKIKGIIKSITDFGIFIGLDGNIDGLIHLSDLSWTDPGEEIIRNFKKGDEIEAIILSIDVEKER 1493 (1619)
Q Consensus 1427 ~vG~~v~G~V~~i~~~GvfV~~~~~v~Glv~~sels~~~~~~~~~~~f~vGq~V~~~Vl~vd~e~~r 1493 (1619)
++|++++|.|.++....++|.+ +++.|++|+++... .+.|++||.|+|.|.+|+.+.+.
T Consensus 7 ~~geiv~G~V~r~~~~~~~Vdl-g~~eaiLp~~eqip-------~E~~~~Gdrik~~i~~V~~~~kg 65 (72)
T d1hh2p1 7 LKGTVTTAEVIRVMGEWADIRI-GKLETRLPKKEWIP-------GEEIKAGDLVKVYIIDVVKTTKG 65 (72)
T ss_dssp CTTCEEEEEEEEECSSEEEEEE-TTEEEEEEGGGSCT-------TCCCCTTCEEEEEEEEEEEETTE
T ss_pred ccCcEEEEEEEEEcCCCEEEEE-CCcEEECCHHHcCC-------CCCCCCCCEEEEEEEEEEEcCCC
Confidence 4799999999999999999999 57999999999873 45799999999999999876654
No 64
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=97.78 E-value=4.5e-06 Score=89.84 Aligned_cols=188 Identities=14% Similarity=0.169 Sum_probs=102.3
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccccc
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTT 939 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 939 (1619)
++|.+.|..||||+|+++.+ +.+|++++|++.+.|.+ .+.+- .....+ ....+..+. .-||..-..
T Consensus 4 ~iIgitG~igSGKStv~~~l-~~~G~~vidaD~i~~~l----~~~~~--~~~~~i---~~~fg~~i~----~~~~~i~r~ 69 (208)
T d1vhta_ 4 YIVALTGGIGSGKSTVANAF-ADLGINVIDADIIARQV----VEPGA--PALHAI---ADHFGANMI----AADGTLQRR 69 (208)
T ss_dssp EEEEEECCTTSCHHHHHHHH-HHTTCEEEEHHHHHHHT----TSTTC--THHHHH---HHHHCGGGB----CTTSCBCHH
T ss_pred EEEEEECCCcCCHHHHHHHH-HHCCCcEEEchHHHHHH----Hhccc--hHHHHH---HHHhhcccc----cCCcccchh
Confidence 37888999999999999976 58899999999999832 22221 111122 221111111 011221112
Q ss_pred ccccccccccccc----ccccHHHHHHHHHHHHhhhcCCCeEEeccccCeeeec-CCCeEEEEEcCHHHHHHhchHHHHh
Q psy14505 940 LIRNEKVSNNASK----IAKFKNIRKELFKIQVKFRKFPGLVADGRDMGTTVFP-DAFLKIFLTADIKQRTKRRYKQLMQ 1014 (1619)
Q Consensus 940 ~ir~~~~~~~~s~----~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~~v~p-~a~~kifl~A~~e~Ra~Rr~~~l~~ 1014 (1619)
.++..-....... --.+|.+++...+.... +....+++++...-..-++ ..+..||++||++.|.+|+.++
T Consensus 70 ~L~~~vf~~~~~~~~Le~i~hp~v~~~~~~~~~~-~~~~~~~~e~~ll~e~~~~~~~~~iI~V~a~~e~r~~R~~~R--- 145 (208)
T d1vhta_ 70 ALRERIFANPEEKNWLNALLHPLIQQETQHQIQQ-ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQR--- 145 (208)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH-CCSSEEEEECTTTTTTTGGGGCSEEEEEECCHHHHHHHHHHH---
T ss_pred hhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHHHH-hhcCCcceeeeecccccccccCCEEEEEeCCHHHHHHHHHHh---
Confidence 2332221111100 11477777766554433 3445577776533222222 2457899999999999995433
Q ss_pred cCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhhhhhh
Q psy14505 1015 KGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFATLFK 1075 (1619)
Q Consensus 1015 ~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ll~ 1075 (1619)
.+.+.+++.+.+..--..+.. ....| ++||++. ++|+....+.+++.++++
T Consensus 146 --~~~~~~~~~~~~~~Q~~~~~k------~~~aD-~vI~N~~-~le~l~~~v~~l~~~~l~ 196 (208)
T d1vhta_ 146 --DDVTREHVEQILAAQATREAR------LAVAD-DVIDNNG-APDAIASDVARLHAHYLQ 196 (208)
T ss_dssp --HTCCHHHHHHHHHHSCCHHHH------HHHCS-EEEECSS-CTTSHHHHHHHHHHHHHH
T ss_pred --hhhhHHHHHHHHHhCCCHHHH------HHhCC-EEEECCC-CHHHHHHHHHHHHHHHHH
Confidence 335777766654442111111 11223 5566664 888887777666665554
No 65
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.75 E-value=1.4e-05 Score=84.68 Aligned_cols=174 Identities=20% Similarity=0.230 Sum_probs=97.6
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCCccccc
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNGVNVTT 939 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 939 (1619)
.+|.+-|++||||+|.++.||+++|++|+++|.++|..+. .+.. ....+.+.... |..
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~g~~~is~g~llr~~~~----~~~~--~~~~~~~~~~~-------------~~~--- 66 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVS----SGSA--RGKMLSEIMEK-------------GQL--- 66 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTCCEEEEHHHHHHHHHH----HTCH--HHHHHHHHHTT-------------TCC---
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeeEeccHHHHHHHH----HhHh--hhhhhHHHHhh-------------ccC---
Confidence 5788889999999999999999999999999999995433 2110 01111111110 110
Q ss_pred cccccccccccccccccHHHHHHHHHHH-HhhhcCCCeEEeccccC--ee-----eecCCCeEEEEEcCHHHHHHhchHH
Q psy14505 940 LIRNEKVSNNASKIAKFKNIRKELFKIQ-VKFRKFPGLVADGRDMG--TT-----VFPDAFLKIFLTADIKQRTKRRYKQ 1011 (1619)
Q Consensus 940 ~ir~~~~~~~~s~~a~~~~vr~~~~~~~-r~~a~~~~~V~~GRd~~--~~-----v~p~a~~kifl~A~~e~Ra~Rr~~~ 1011 (1619)
.....+...+.+.. .......++|++|-... .. -+-.-...+|+.+++++..+|....
T Consensus 67 --------------~~~~~~~~~~~~~l~~~~~~~~g~ildg~pr~~~qa~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 132 (194)
T d3adka_ 67 --------------VPLETVLDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEFERKIGQPTLLLYVDAGPETMTKRLLKR 132 (194)
T ss_dssp --------------CCHHHHHHHHHHHHHTTTTTCSCEEEESCCSSHHHHHHHHHHTCCCSEEEEEECCHHHHHHHHHHH
T ss_pred --------------CchheeeeehhhhhhhcccccccceeeeccchhHHHHHHHHHhCCccchhccccchhhhHhHhhhh
Confidence 11112222222222 23334567999994211 00 0011247899999999999996655
Q ss_pred HHhcC-CCCCHHHHHHHHHhhhhhcccCC-CCCCCCCCCceEEccCcccchhhhhhhhhhhhh
Q psy14505 1012 LMQKG-FSVSMSDLLINLIKRDIRDKTRN-LSPLKCPEQAHLLNTSKMNINQVVNQILDCFAT 1072 (1619)
Q Consensus 1012 l~~~~-~~~~~~~~~~~i~~rD~~d~~r~-~~~l~~~~dal~Idts~l~ieevv~~I~~~i~~ 1072 (1619)
....+ ..-+.+.+.+.++.- ...... +.-|......+.||++. ++++|++.|...+..
T Consensus 133 ~~~~~r~~d~~e~i~~R~~~y--~~~~~~~~~~y~~~~~~~~Id~~~-s~~eV~~~I~~~i~~ 192 (194)
T d3adka_ 133 GETSGRVDDNEETIKKRLETY--YKATEPVIAFYEKRGIVRKVNAEG-SVDDVFSQVCTHLDT 192 (194)
T ss_dssp HHHHTCCCCCSTTHHHHHHHH--HHHTHHHHHHHTTTTCEEEEECCS-CHHHHHHHHHHHHHT
T ss_pred cccccCCcchHHHHHHHHHHH--HHHHHHHHHHHHhcCCEEEEECCC-CHHHHHHHHHHHHHh
Confidence 33322 222334444433321 111100 11133334457899885 999999999877654
No 66
>d2ja9a1 b.40.4.5 (A:62-151) S1-domain of exosome component 3 (RRP40) {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=97.71 E-value=2.8e-05 Score=71.28 Aligned_cols=73 Identities=8% Similarity=-0.053 Sum_probs=62.9
Q ss_pred cccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCccccCCCccccccCCCEEEEEEEEeecccceEEEeeec
Q psy14505 1339 YPRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEINEERRRISLGMKQ 1413 (1619)
Q Consensus 1339 l~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK~ 1413 (1619)
.++||+|-|+|+++...++||+++....|++|.+...+ ....+.+..|++||.|-|+|.++|+ +..+.||++.
T Consensus 5 P~~gD~ViG~V~~~~~~~~~vdI~~~~~~~L~~~~~f~-g~~k~~r~~l~~GDlV~arV~~v~~-~~~~~Lsc~~ 77 (90)
T d2ja9a1 5 PSVNDFVIGVIIGTFSDSYKVSLQNFSSSVSLSYMAFP-NASKKNRPTLQVGDLVYARVCTAEK-ELEAEIECFD 77 (90)
T ss_dssp CCTTCEEEEEEEEECSSEEEEESSTTSCCEEEETTSST-TCCSSSCCCCCTTCEEEEEEEECCT-TSCCEEESSC
T ss_pred CCCCCEEEEEEEEEeCCcEEEEcCCcchhhhhhhhccC-ccccccCCccCCCCEEEEEEEEECC-CCCEEEEEec
Confidence 47899999999999999999999888999999776644 4456777889999999999999995 5679999864
No 67
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=97.71 E-value=2.4e-05 Score=81.56 Aligned_cols=36 Identities=33% Similarity=0.565 Sum_probs=33.2
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHH
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRL 896 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~ 896 (1619)
.|.+-|++||||+|.++.||+++|+.|+++|.++|.
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~~~~llr~ 37 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRA 37 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEEHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceechhhHhHH
Confidence 466779999999999999999999999999999994
No 68
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=97.66 E-value=0.00012 Score=76.37 Aligned_cols=36 Identities=31% Similarity=0.522 Sum_probs=33.6
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHH
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRL 896 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~ 896 (1619)
.|.+-|++||||+|.++.||+++|++|+++|.++|.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is~gdllr~ 37 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRA 37 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceeeHHHHHHH
Confidence 467789999999999999999999999999999994
No 69
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=97.64 E-value=4.2e-05 Score=79.80 Aligned_cols=172 Identities=14% Similarity=0.076 Sum_probs=89.2
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhC-----CEEechhhHHHHHHHHHHHcCCCCCcHHHHHHHHHcccceecCceEEeCC
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLG-----FHYLDSGALYRLVTLSAINNNIQLDNELELVILIKKLNYNFLGKEVYLNG 934 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~-----~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1619)
.+|.+.|.+|+||+|.++.|+++|+ +++++.|..++..+. +.+.... ..... .....
T Consensus 2 kiivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~~~d~~~~~~~---~~~~~~~-~~~~~------~~~~~-------- 63 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATAL---KLGYAKD-RDEMR------KLSVE-------- 63 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEEHHHHHHHHHH---TTTSCSS-HHHHT------TSCHH--------
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCcchHHHH---HHHhhhh-hhhcc------ccchh--------
Confidence 4778899999999999999999985 456677877775443 3333211 10000 00000
Q ss_pred ccccccccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccCeee---------------ecCCCeEEEEEc
Q psy14505 935 VNVTTLIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGTTV---------------FPDAFLKIFLTA 999 (1619)
Q Consensus 935 ~~v~~~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~~v---------------~p~a~~kifl~A 999 (1619)
........++....+..+. .....+++++. .... .+..++.|||.|
T Consensus 64 ----------------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~ 124 (194)
T d1nksa_ 64 ----------------KQKKLQIDAAKGIAEEARA-GGEGYLFIDTH--AVIRTPSGYLPGLPSYVITEINPSVIFLLEA 124 (194)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHH-TCSSEEEEEEC--SEEEETTEEEESSCHHHHHHHCCSEEEEEEC
T ss_pred ----------------hcccCHHHHHHHHHHHHHH-hCCCcEEEEcc--CchHHHHHHHHhHHHHHHhhhccccceEEec
Confidence 0000000111111111121 23345555542 1111 123468999999
Q ss_pred CHHHHHHhchHHHHhcCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhh
Q psy14505 1000 DIKQRTKRRYKQLMQKGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCF 1070 (1619)
Q Consensus 1000 ~~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i 1070 (1619)
|++++.+|+.++-.+.......+...+.....-.. .....+.+. ....++||++..++|++++.|++.+
T Consensus 125 ~~~~~~~R~~~r~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~I~~~~~~~ee~~~~Ii~~i 193 (194)
T d1nksa_ 125 DPKIILSRQKRDTTRNRNDYSDESVILETINFARY-AATASAVLA-GSTVKVIVNVEGDPSIAANEIIRSM 193 (194)
T ss_dssp CHHHHHHHHHHCTTTCCCCCCSHHHHHHHHHHHHH-HHHHHHHHH-TCEEEEEECCSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHh-HHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHHh
Confidence 99999999766533333333444433322211100 000111111 1124678999999999999998765
No 70
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.62 E-value=4e-05 Score=82.11 Aligned_cols=169 Identities=17% Similarity=0.199 Sum_probs=87.5
Q ss_pred cccEEEecCCcCCCCchhHHHHHHHh----C--CEEechhhHHHHHHHHHHHcCCCCCcHHHHHHH--HHcccceecCce
Q psy14505 858 YIPVITIDGPTASGKGTVAQLVASKL----G--FHYLDSGALYRLVTLSAINNNIQLDNELELVIL--IKKLNYNFLGKE 929 (1619)
Q Consensus 858 ~~~iIti~g~~gsGK~~~~~~la~~l----~--~~~~dtg~~yr~~~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 929 (1619)
..++|-+.|.+|+||+|+++.|++++ + ..++|...+ | ..+..++........... +...-..+.
T Consensus 23 kg~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~i-R----~~l~~~l~ys~~~r~~~~~r~~~~a~~~~--- 94 (208)
T d1m7ga_ 23 RGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNI-R----FGLNKDLGFSEADRNENIRRIAEVAKLFA--- 94 (208)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHH-T----TTTTTTCCSSHHHHHHHHHHHHHHHHHHH---
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHH-H----HhhcCCCCCChhHHHHHHHHHHHHHHHHh---
Confidence 45688889999999999999999766 3 456775443 4 222222222222221111 000000000
Q ss_pred EEeCCccccccccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEecccc-CeeeecCCCeEEEEEcCHHHHHHhc
Q psy14505 930 VYLNGVNVTTLIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDM-GTTVFPDAFLKIFLTADIKQRTKRR 1008 (1619)
Q Consensus 930 ~~~~~~~v~~~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~-~~~v~p~a~~kifl~A~~e~Ra~Rr 1008 (1619)
.......++.++..+..|+...++..... .++.. ..+ +-|||+||.+++.+|.
T Consensus 95 -------------~~g~~viv~~i~~~~~~R~~~r~i~~~~~-------~~~~~~~~~------~eVyv~~~le~~~~Rd 148 (208)
T d1m7ga_ 95 -------------DSNSIAITSFISPYRKDRDTARQLHEVAT-------PGEETGLPF------VEVYVDVPVEVAEQRD 148 (208)
T ss_dssp -------------HTTCEEEEECCCCCHHHHHHHHHHHHCCC-------TTCSCCCCE------EEEEEECCHHHHHTSC
T ss_pred -------------ccCCceeeecccccHHHHHHHHHHhhhhc-------cchhcCCce------EEEEEcCCHHHHHHhh
Confidence 00011123445666666665543221111 11212 223 3499999999999993
Q ss_pred hHHHHhcCCCCCHHHHHHHHHhhhhhcccCCCCCCC-CCCCceEEccCcccchhhhhhhhhhhhh
Q psy14505 1009 YKQLMQKGFSVSMSDLLINLIKRDIRDKTRNLSPLK-CPEQAHLLNTSKMNINQVVNQILDCFAT 1072 (1619)
Q Consensus 1009 ~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~-~~~dal~Idts~l~ieevv~~I~~~i~~ 1072 (1619)
-+. -+.++.+. ......---.||. |.+..++|||+.++++++++.|++++++
T Consensus 149 ~k~--------~y~~~~~~----~~~~~~gvd~~ye~P~~~dl~Idt~~~s~~e~~~~Ii~~L~~ 201 (208)
T d1m7ga_ 149 PKG--------LYKKAREG----VIKEFTGISAPYEAPANPEVHVKNYELPVQDAVKQIIDYLDT 201 (208)
T ss_dssp TTC--------HHHHHHHT----SSSSCBTTTBCCCCCSSCSEEEECSSSCHHHHHHHHHHHHHH
T ss_pred ccc--------chhhhhcC----cccceecccccCCCCCCCcEEEeCCCCCHHHHHHHHHHHHHH
Confidence 222 22222221 1111100112333 3344699999999999999999887653
No 71
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.60 E-value=8.2e-05 Score=77.56 Aligned_cols=36 Identities=39% Similarity=0.649 Sum_probs=33.1
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHH
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRL 896 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~ 896 (1619)
.|.+-|++||||+|.++.||+++|+.++++|.+.|.
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~~~~l~~~ 37 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRR 37 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEEHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEchHHHHHH
Confidence 467779999999999999999999999999999883
No 72
>d2asba1 b.40.4.5 (A:108-183) S1 domain of NusA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.20 E-value=0.00031 Score=61.80 Aligned_cols=65 Identities=23% Similarity=0.291 Sum_probs=52.8
Q ss_pred CCCCeEEEEEEEEecc----EEEEEeCC---CeEEEEecccccccCCCccccCCCEEEEEEEEEeCC--CCeEEEeh
Q psy14505 1084 RSGEVISAEVIGLDRN----FVIINADL---KSEAFIPIEEFKNDNGELEVKIGDFVSVAIESLENG--FGDTILSR 1151 (1619)
Q Consensus 1084 ~~G~iv~G~V~~v~~~----gv~V~lg~---~~~Gfi~~~e~~~~~~~~~~kvG~~v~~~V~~v~~~--~~~v~LS~ 1151 (1619)
+.|++|.|.|..++.+ .++|++|. +.+|+||.+|.- +.+.|++||.++|+|..+... +-.+.||.
T Consensus 3 r~geiv~G~V~r~~~~~~~~~v~vdlG~~~~~~EaiLp~~eqi---p~E~y~~Gdrik~~i~~V~~~~kGp~IilSR 76 (76)
T d2asba1 3 REGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQV---PGESYEHGNRLRCYVVGVTRGAREPLITLSR 76 (76)
T ss_dssp CTTCEEEEEEECCHHHHHTTCEEEEECSSSSCEEEEECGGGSC---TTCCCCTTCEEEEEEEEEECCSSSCEEEEES
T ss_pred ccceEEEEEEEEEecCCCceEEEEECCCCCCCEEEECCHHHcC---CCcccCCCCEEEEEEEEEEecCCCCEEEEeC
Confidence 5799999999999754 38999984 699999998763 446799999999999999754 34577763
No 73
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.17 E-value=0.00043 Score=71.91 Aligned_cols=36 Identities=28% Similarity=0.452 Sum_probs=32.6
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEechhhHHHH
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLDSGALYRL 896 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr~ 896 (1619)
.|.+-|++||||+|.++.||+++|++++++|.+.|.
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~g~~~i~~~d~~~~ 39 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRS 39 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCEEEEHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceEecccccee
Confidence 455669999999999999999999999999999883
No 74
>d2asba1 b.40.4.5 (A:108-183) S1 domain of NusA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.16 E-value=0.00046 Score=60.62 Aligned_cols=63 Identities=17% Similarity=0.382 Sum_probs=52.6
Q ss_pred CCCcEEEEEEEEEecCe----EEEEeC----CEEEEeeccccCccccCCCccccccCCEEEEEEEEeecCCC--eEEEe
Q psy14505 1255 KEGCTVKGVVKNITDYG----AFIDLG----GIDGLLHITDIAWRRVKHPSEILTIGQDISTKILKYDQEKN--RVSLG 1323 (1619)
Q Consensus 1255 ~~G~iv~g~V~~v~~~G----~~V~l~----gi~g~l~~sels~~~~~~~~~~~~vG~~v~vrVl~vd~~~~--~i~LS 1323 (1619)
+.|++++|+|..+.... ++|++| +.+|+||.++.- |.+.|++|+.++|.|.+++...+ .|.||
T Consensus 3 r~geiv~G~V~r~~~~~~~~~v~vdlG~~~~~~EaiLp~~eqi------p~E~y~~Gdrik~~i~~V~~~~kGp~IilS 75 (76)
T d2asba1 3 REGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQV------PGESYEHGNRLRCYVVGVTRGAREPLITLS 75 (76)
T ss_dssp CTTCEEEEEEECCHHHHHTTCEEEEECSSSSCEEEEECGGGSC------TTCCCCTTCEEEEEEEEEECCSSSCEEEEE
T ss_pred ccceEEEEEEEEEecCCCceEEEEECCCCCCCEEEECCHHHcC------CCcccCCCCEEEEEEEEEEecCCCCEEEEe
Confidence 67999999999997543 899996 599999998865 67889999999999999986654 45665
No 75
>d2nn6i1 b.40.4.5 (I:61-185) Exosome component 1, EXOSC1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.13 E-value=0.00045 Score=67.09 Aligned_cols=74 Identities=19% Similarity=0.227 Sum_probs=62.9
Q ss_pred ccceEEEEEEEEEecceEEEeeC--------CCeEEEEeCCCCCC-CCCccccccCCCCCCEEEEEEEEeecCCCeEEEe
Q psy14505 1427 KKGEKIKGIIKSITDFGIFIGLD--------GNIDGLIHLSDLSW-TDPGEEIIRNFKKGDEIEAIILSIDVEKERISLG 1497 (1619)
Q Consensus 1427 ~vG~~v~G~V~~i~~~GvfV~~~--------~~v~Glv~~sels~-~~~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LS 1497 (1619)
++|++|.|.|+++.+..++|++. ....|++|.+++.. +....++.+.|++||.|+|+|+++...+..+.||
T Consensus 6 ~vGDiVig~V~~v~~~~a~v~I~~v~~~~l~~~~~g~i~~~dvr~te~d~~~m~~~fr~GDiV~A~Vis~~~~~~~~~Ls 85 (125)
T d2nn6i1 6 DVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLT 85 (125)
T ss_dssp CTTCEEEEEEEEECSSEEEEEEEESSSSCCCCSSCSCEEEEGGGTCSSCCCCGGGTCCSSSEEEEEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEEEEecCCEEEEEEeEecCcccccCccccccHHHcccchhhhhhHHHhcCCCCEEEEEEEEccCCCccEEEE
Confidence 67999999999999999999983 36789999998853 2344577899999999999999998766779999
Q ss_pred eec
Q psy14505 1498 IKQ 1500 (1619)
Q Consensus 1498 lK~ 1500 (1619)
.+.
T Consensus 86 t~~ 88 (125)
T d2nn6i1 86 TAE 88 (125)
T ss_dssp CCS
T ss_pred ecC
Confidence 876
No 76
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.12 E-value=0.00011 Score=77.13 Aligned_cols=36 Identities=22% Similarity=0.196 Sum_probs=31.6
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHHH
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALYR 895 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr 895 (1619)
++|-+.|.+||||+|+++.||++++++++|+..+..
T Consensus 20 ~vI~L~G~pGSGKTTiAk~La~~l~~~~~~~~~~~~ 55 (195)
T d1x6va3 20 CTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDG 55 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEECH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhcCCCccchhH
Confidence 567788999999999999999999998888877655
No 77
>d2nn6i1 b.40.4.5 (I:61-185) Exosome component 1, EXOSC1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.07 E-value=0.00053 Score=66.59 Aligned_cols=75 Identities=16% Similarity=0.161 Sum_probs=62.4
Q ss_pred cccceeEEEEEEEEcCCeEEEEEc--------CCEEEEEeccccCcc-ccCCCccccccCCCEEEEEEEEeecccceEEE
Q psy14505 1339 YPRGTRLLGKVTNLTDYGAFVEIE--------KGIEGLVHISEMDWI-NKNVTPSKIVQLNDTVEIMILEINEERRRISL 1409 (1619)
Q Consensus 1339 l~~G~iv~g~V~~v~~~G~fV~l~--------~gv~GlV~~sels~~-~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~L 1409 (1619)
.++||+|-|+|+++.+..++|++. ..+.|++|.++...+ ....+..+.|++||.|+|+|+++...+..+.|
T Consensus 5 P~vGDiVig~V~~v~~~~a~v~I~~v~~~~l~~~~~g~i~~~dvr~te~d~~~m~~~fr~GDiV~A~Vis~~~~~~~~~L 84 (125)
T d2nn6i1 5 PDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLL 84 (125)
T ss_dssp CCTTCEEEEEEEEECSSEEEEEEEESSSSCCCCSSCSCEEEEGGGTCSSCCCCGGGTCCSSSEEEEEEEEEETTTTEEEE
T ss_pred CCCCCEEEEEEEEecCCEEEEEEeEecCcccccCccccccHHHcccchhhhhhHHHhcCCCCEEEEEEEEccCCCccEEE
Confidence 468999999999999999999983 367899999998432 23346789999999999999999866667889
Q ss_pred eeec
Q psy14505 1410 GMKQ 1413 (1619)
Q Consensus 1410 SlK~ 1413 (1619)
|.+.
T Consensus 85 st~~ 88 (125)
T d2nn6i1 85 TTAE 88 (125)
T ss_dssp ECCS
T ss_pred EecC
Confidence 8875
No 78
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.99 E-value=0.00072 Score=69.17 Aligned_cols=33 Identities=24% Similarity=0.132 Sum_probs=27.3
Q ss_pred cccEEEecCCcCCCCchhHHHHHHHhCCEEech
Q psy14505 858 YIPVITIDGPTASGKGTVAQLVASKLGFHYLDS 890 (1619)
Q Consensus 858 ~~~iIti~g~~gsGK~~~~~~la~~l~~~~~dt 890 (1619)
..++|-+.|.+|+||+|+++.||++|+..+++.
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~~~~~~~ 37 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLNQQGGRS 37 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHHCSSC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhcCCCc
Confidence 346788889999999999999999997655554
No 79
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.71 E-value=0.0014 Score=70.71 Aligned_cols=85 Identities=9% Similarity=0.041 Sum_probs=50.7
Q ss_pred cCCCeEEEEEcCHHHHHHhchHHHHhcCCCCCHHHHHHHHHh-hhh---hcccCCCCCCCCCCCceEEccCcccchhhhh
Q psy14505 989 PDAFLKIFLTADIKQRTKRRYKQLMQKGFSVSMSDLLINLIK-RDI---RDKTRNLSPLKCPEQAHLLNTSKMNINQVVN 1064 (1619)
Q Consensus 989 p~a~~kifl~A~~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~-rD~---~d~~r~~~~l~~~~dal~Idts~l~ieevv~ 1064 (1619)
|..++.|||++||++..+|..++........+.+- ++.+.+ .+. ........+.......++||++ .+++++.+
T Consensus 151 ~~Pdl~i~Ld~~pe~~~~Ri~~r~~~~e~~~~~~y-l~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~ID~~-~~ie~v~~ 228 (241)
T d1p5zb_ 151 LELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEY-LEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVN-EDFKDKYE 228 (241)
T ss_dssp HCCSEEEEEECCHHHHHHHHHHHCCGGGTTCCHHH-HHHHHHHHHHHHTTCCCCCSCGGGGGSCEEEEECC-SCHHHHHH
T ss_pred CCCceeeeeccCHHHHHHHHHhhcchhhhcCCHHH-HHHHHHHHHHHHHHhhhhhhHhhcCCCCEEEEECC-CCHHHHHH
Confidence 45679999999999998885433111112233332 222222 111 1111122333445567999987 59999999
Q ss_pred hhhhhhhhhhh
Q psy14505 1065 QILDCFATLFK 1075 (1619)
Q Consensus 1065 ~I~~~i~~ll~ 1075 (1619)
.|++.++..++
T Consensus 229 ~i~~~i~~~l~ 239 (241)
T d1p5zb_ 229 SLVEKVKEFLS 239 (241)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99988877665
No 80
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.70 E-value=0.0013 Score=70.19 Aligned_cols=90 Identities=9% Similarity=0.115 Sum_probs=46.5
Q ss_pred cCCCeEEEEEcCHHHHHHhchHHHHhcCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhh
Q psy14505 989 PDAFLKIFLTADIKQRTKRRYKQLMQKGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILD 1068 (1619)
Q Consensus 989 p~a~~kifl~A~~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~ 1068 (1619)
|..|+.|||+++++.+.+||-.+ ..+.+ .+. +..+.+.+. ..+..+. .+.......++||+|..++|+|.+.|.+
T Consensus 122 ~~PDl~i~Ld~~~~~~~~r~~~~-~~~~~-e~~-~~~~~v~~~-Y~~l~~~-~~~~~~~~~~iID~s~~~~eev~~~I~~ 196 (214)
T d1tmka_ 122 LKPDLTLFLSTQDVDNNAEKSGF-GDERY-ETV-KFQEKVKQT-FMKLLDK-EIRKGDESITIVDVTNKGIQEVEALIWQ 196 (214)
T ss_dssp BCCSEEEEEECC----------C-CSSTT-CCH-HHHHHHHHH-HHHHHHH-HHHTTCTTEEEEECTTCCHHHHHHHHHH
T ss_pred CCcceehhccccHHHHHHHhccc-chhhh-hhH-HHHHHHHHH-HHHHHHH-hhhhCCCcEEEEECCCCCHHHHHHHHHH
Confidence 45579999999998887774322 11111 121 222222221 0000000 0001123468899999999999999999
Q ss_pred hhhhhhhhhcccccC
Q psy14505 1069 CFATLFKESLLRHDM 1083 (1619)
Q Consensus 1069 ~i~~ll~e~l~~~~l 1083 (1619)
.++..++..++.+.+
T Consensus 197 ~v~~~l~~~~~~~~~ 211 (214)
T d1tmka_ 197 IVEPVLSTHIDHDKF 211 (214)
T ss_dssp HHHHHHHSCCCTTCC
T ss_pred HHHHHHHhhcCcccc
Confidence 999999987776554
No 81
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=95.78 E-value=0.0052 Score=67.86 Aligned_cols=73 Identities=14% Similarity=0.123 Sum_probs=51.4
Q ss_pred CCeEEeccccCee-----eecCCCeEEEEEcCHHHHHHhchHH-HHhcCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCC
Q psy14505 974 PGLVADGRDMGTT-----VFPDAFLKIFLTADIKQRTKRRYKQ-LMQKGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPE 1047 (1619)
Q Consensus 974 ~~~V~~GRd~~~~-----v~p~a~~kifl~A~~e~Ra~Rr~~~-l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~ 1047 (1619)
.-+++||=..+.+ +....|+|||+.++.+.|-.||..+ ...+|+ +.|++.+.+.+| +-|..+.+.|.....
T Consensus 125 dvIivEGlh~l~~~~~~~ir~~~DlkIfVd~d~dlrliRRI~RD~~eRG~--s~E~V~~~i~rr-mpdy~~yI~Pq~~~a 201 (288)
T d1a7ja_ 125 HLLFYEGLHGAVVNSEVNIAGLADLKIGVVPVINLEWIQKIHRDRATRGY--TTEAVTDVILRR-MHAYVHCIVPQFSQT 201 (288)
T ss_dssp SEEEEEESCTTCBCSSCBCGGGCSEEEEEEECHHHHHHHHHHHTSSSCCS--CCCCHHHHHHHH-HHHHHHHTGGGGGTC
T ss_pred ceEEEechhhccccchhhhHhhcCeEEEEECCCCeEEEeeehhhhhhcCC--CHHHHHHHHHhc-chHHHHHHHHhhhce
Confidence 3478889533211 2233679999999999999998876 233455 889999998876 667666777776555
Q ss_pred Cc
Q psy14505 1048 QA 1049 (1619)
Q Consensus 1048 da 1049 (1619)
|.
T Consensus 202 DI 203 (288)
T d1a7ja_ 202 DI 203 (288)
T ss_dssp SE
T ss_pred eE
Confidence 53
No 82
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=95.65 E-value=0.013 Score=61.66 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=46.6
Q ss_pred cCCCeEEEEEcCHHHHHHhchHHHHhcCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhh
Q psy14505 989 PDAFLKIFLTADIKQRTKRRYKQLMQKGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILD 1068 (1619)
Q Consensus 989 p~a~~kifl~A~~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~ 1068 (1619)
|..++-|||++|+++..+|..++-..........+.++.+.+. ..+.... .+...+||++ .++|+|.+.|.+
T Consensus 130 ~~pdl~i~Ld~~~e~~~~Ri~~R~~~~~~~~~~~~~~~~v~~~-y~~~~~~------~~~~~~IDa~-~~~e~v~~~I~~ 201 (210)
T d4tmka_ 130 FRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRAR-YLELAAQ------DKSIHTIDAT-QPLEAVMDAIRT 201 (210)
T ss_dssp CCCSEEEEEECCHHHHHHHHHHHSSCCTTTTSCHHHHHHHHHH-HHHHHHT------CTTEEEEETT-SCHHHHHHHHHH
T ss_pred CCCceEEEecchHHHHHHHhhhccccchhhhccHHHHHHHHHH-HHHHHhc------CCCEEEEECC-CCHHHHHHHHHH
Confidence 4457999999999999999433310001111112233333221 1111101 1224789987 599999999999
Q ss_pred hhhhhhhh
Q psy14505 1069 CFATLFKE 1076 (1619)
Q Consensus 1069 ~i~~ll~e 1076 (1619)
.+.+.+++
T Consensus 202 ~i~~~l~~ 209 (210)
T d4tmka_ 202 TVTHWVKE 209 (210)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 88877764
No 83
>d1smxa_ b.40.4.5 (A:) S1-domain of Ribonuclease E {Escherichia coli [TaxId: 562]}
Probab=95.50 E-value=0.015 Score=52.09 Aligned_cols=72 Identities=15% Similarity=0.165 Sum_probs=54.7
Q ss_pred eeEEEEEEEEcCC--eEEEEEcCCEEEEEeccccCcccc--------CCCccccccCCCEEEEEEEEeecccceEEEeee
Q psy14505 1343 TRLLGKVTNLTDY--GAFVEIEKGIEGLVHISEMDWINK--------NVTPSKIVQLNDTVEIMILEINEERRRISLGMK 1412 (1619)
Q Consensus 1343 ~iv~g~V~~v~~~--G~fV~l~~gv~GlV~~sels~~~~--------~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK 1412 (1619)
.++.|+|.+|.+. ++||+++.+-.||+|.+++.+... ..+..+.+++||.|-|.|..=....+--.||..
T Consensus 2 NIY~G~V~~V~pgl~AAFVDiG~~k~gFL~~~di~~~~~~~~~~~~~~~~i~~~l~~G~~ilVQV~Ke~~~~KGprlT~~ 81 (87)
T d1smxa_ 2 NIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTF 81 (87)
T ss_dssp CCEEEEEEEEEGGGTEEEEESSSSSCEEEEGGGSCGGGCSSCCCSSSCCCGGGTCCTTCEEEEEEEECCBTTBCCEEESC
T ss_pred CcEEEEEEEecCCceEEEEEeCCCccceeEecccceeeeccccccccccchhhhccCCCeEEEEEeecccCCCCceEEEE
Confidence 5789999999985 899999999999999999854211 123456789999999998865555555666654
Q ss_pred cc
Q psy14505 1413 QC 1414 (1619)
Q Consensus 1413 ~~ 1414 (1619)
-+
T Consensus 82 Is 83 (87)
T d1smxa_ 82 IS 83 (87)
T ss_dssp CC
T ss_pred EE
Confidence 43
No 84
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.24 E-value=0.038 Score=58.18 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=45.2
Q ss_pred ecCCCeEEEEEcCHHHHHHhchHHHHhcCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhh
Q psy14505 988 FPDAFLKIFLTADIKQRTKRRYKQLMQKGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQIL 1067 (1619)
Q Consensus 988 ~p~a~~kifl~A~~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~ 1067 (1619)
+|..|+-|||++|++.-.+|+-.+ ...+ .+. +..+.+. +.-..-....| ...++||++. ++|+|.+.|.
T Consensus 121 ~~~PDl~i~Ld~~~e~~~~R~~~~--~~~~-E~~-~~~~r~~--~~Y~~l~~~~~----~~~~~IDa~~-~~e~V~~~I~ 189 (209)
T d1nn5a_ 121 LPKPDLVLFLQLQLADAAKRGAFG--HERY-ENG-AFQERAL--RCFHQLMKDTT----LNWKMVDASK-SIEAVHEDIR 189 (209)
T ss_dssp SBCCSEEEEEECCHHHHHHC-------CTT-CSH-HHHHHHH--HHHHHHTTCTT----SCEEEEETTS-CHHHHHHHHH
T ss_pred CCCCceeeeecccHHHHhhhhccc--cccc-ccH-HHHHHHH--HHHHHHHHhCC----CCEEEEECCC-CHHHHHHHHH
Confidence 355579999999999888883221 1111 122 2222221 11111101111 2358899886 9999999999
Q ss_pred hhhhhhhhhh
Q psy14505 1068 DCFATLFKES 1077 (1619)
Q Consensus 1068 ~~i~~ll~e~ 1077 (1619)
..+...+.+.
T Consensus 190 ~~v~~~l~~~ 199 (209)
T d1nn5a_ 190 VLSEDAIATA 199 (209)
T ss_dssp HHHHHHHHHG
T ss_pred HHHHHHHHhc
Confidence 9888877653
No 85
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=94.80 E-value=0.012 Score=58.06 Aligned_cols=37 Identities=24% Similarity=0.291 Sum_probs=30.1
Q ss_pred EEEecCCcCCCCchhHHHHH-HHhCCEEechhhHHHHH
Q psy14505 861 VITIDGPTASGKGTVAQLVA-SKLGFHYLDSGALYRLV 897 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la-~~l~~~~~dtg~~yr~~ 897 (1619)
+|.+.|++||||+|.++.++ +..++.+++++.+.++.
T Consensus 4 lIii~G~pGsGKTTla~~L~~~~~~~~~~~~d~~~~~~ 41 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSI 41 (152)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSTTEEEECHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCCCEEechHHHHHHH
Confidence 45567999999999999875 56789999998876633
No 86
>d1smxa_ b.40.4.5 (A:) S1-domain of Ribonuclease E {Escherichia coli [TaxId: 562]}
Probab=94.24 E-value=0.042 Score=49.13 Aligned_cols=70 Identities=17% Similarity=0.223 Sum_probs=54.4
Q ss_pred eEEEEEEEEEecc--eEEEeeCCCeEEEEeCCCCCCCC--------CccccccCCCCCCEEEEEEEEeecCCCeEEEeee
Q psy14505 1430 EKIKGIIKSITDF--GIFIGLDGNIDGLIHLSDLSWTD--------PGEEIIRNFKKGDEIEAIILSIDVEKERISLGIK 1499 (1619)
Q Consensus 1430 ~~v~G~V~~i~~~--GvfV~~~~~v~Glv~~sels~~~--------~~~~~~~~f~vGq~V~~~Vl~vd~e~~ri~LSlK 1499 (1619)
.++.|+|.+|.+. ++||.+..+-.||+|.+++.+.. ...+..+.+++||.|-|+|..=-...+--.||..
T Consensus 2 NIY~G~V~~V~pgl~AAFVDiG~~k~gFL~~~di~~~~~~~~~~~~~~~~i~~~l~~G~~ilVQV~Ke~~~~KGprlT~~ 81 (87)
T d1smxa_ 2 NIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTF 81 (87)
T ss_dssp CCEEEEEEEEEGGGTEEEEESSSSSCEEEEGGGSCGGGCSSCCCSSSCCCGGGTCCTTCEEEEEEEECCBTTBCCEEESC
T ss_pred CcEEEEEEEecCCceEEEEEeCCCccceeEecccceeeeccccccccccchhhhccCCCeEEEEEeecccCCCCceEEEE
Confidence 4789999999987 99999999999999999987421 1234567899999999999876655555555543
No 87
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.88 E-value=0.092 Score=55.95 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=28.2
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhH
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGAL 893 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~ 893 (1619)
..|++.|.-|+||+|.++.|++.++-..+..+.+
T Consensus 3 k~IviEG~~GsGKST~~~~L~~~l~~~~i~~epv 36 (241)
T d2ocpa1 3 RRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPV 36 (241)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHCTTSEEECCCG
T ss_pred eEEEEECCCCCcHHHHHHHHHHHHhhcCCccccc
Confidence 4688999999999999999999998766654433
No 88
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.12 E-value=0.19 Score=51.97 Aligned_cols=24 Identities=25% Similarity=0.484 Sum_probs=21.8
Q ss_pred cEEEecCCcCCCCchhHHHHHHHh
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKL 883 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l 883 (1619)
++|++.|.-|+||+|.++.|+++|
T Consensus 1 mlI~ieG~dGsGKST~~~~L~~~l 24 (208)
T d1gsia_ 1 MLIAIEGVDGAGKRTLVEKLSGAF 24 (208)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
Confidence 468999999999999999999876
No 89
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=89.58 E-value=14 Score=38.61 Aligned_cols=295 Identities=8% Similarity=0.004 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh---CCCCCCCCccccccccCCCCccccccCcceEEE
Q psy14505 471 EQKKIINKYENVIKKVIDLTDILSNSKRIIEIITDELNIIKNKY---GSHKKNIRRSEIILNAINPSTEDLIASQDMVIT 547 (1619)
Q Consensus 471 e~~~l~~e~~~l~~~i~~l~~iL~~~~~~~~~i~~el~~ik~~f---~~~~~~~RrT~I~~~~~~~~~~~li~~e~~~v~ 547 (1619)
|+++|++|.+.|+.++.+.+.-..+.. +.+..... +......|||.=- -...+..-+.-++.+.+++
T Consensus 3 ~~~~l~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~tL~G-H~~~I~~l~~s~~~~~l~s 72 (340)
T d1tbga_ 3 ELDQLRQEAEQLKNQIRDARKACADAT---------LSQITNNIDPVGRIQMRTRRTLRG-HLAKIYAMHWGTDSRLLVS 72 (340)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCCCC---------HHHHTTTSCCCCCCCCCEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccch---------HHHHhhccCcccccceeeeEEECC-CCCCEEEEEECCCCCEEEE
Confidence 577888888888888888776444322 22223222 2222235555321 1223333345567888999
Q ss_pred EccCccEEeccCchhhhcccCCCCccccccCCCCeEEEEEEeeCccEEEEEeeCceEEEEEcccCCCCCccCCCccceec
Q psy14505 548 LSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRNSRGKPIINM 627 (1619)
Q Consensus 548 ls~~GyiKr~~~~~~~~~~r~g~g~~~~~~k~~D~~~~~~~~~t~d~llifT~~Gkv~~i~v~elp~~~~~~~G~~i~~l 627 (1619)
.+.+|.|+--+..+.+. ...... ....+..+....+...++.-+..|.+.......... .......+
T Consensus 73 gs~Dg~v~iWd~~~~~~-------~~~~~~-~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~-----~~~~~~~~ 139 (340)
T d1tbga_ 73 ASQDGKLIIWDSYTTNK-------VHAIPL-RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG-----NVRVSREL 139 (340)
T ss_dssp EETTTEEEEEETTTTEE-------EEEEEC-SCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCS-----CCCEEEEE
T ss_pred EECCCceeeeeccccee-------EEEEec-ccccEEeeEeeccceeeeeecccceeeccccccccc-----ccccceec
Confidence 99999998765543211 111111 123344444455566666667777666554333211 11111211
Q ss_pred ccCCCCceEEEEEecCCCCCCCCCCcEEEEEeCCceEEEeeCCCCcCCCCCCceeeecCCCCeEEEEEEecCCCeEEEEe
Q psy14505 628 FSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFS 707 (1619)
Q Consensus 628 l~l~~~e~i~~i~~~~~~~~~~~~e~~~v~iT~~G~iKr~~~~~~~~~~r~G~~~~~lke~D~l~~~~~~~~~d~lll~T 707 (1619)
. ........... .....+.....++..+........ ...........+...........++..+
T Consensus 140 ~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (340)
T d1tbga_ 140 A---GHTGYLSCCRF-------LDDNQIVTSSGDTTCALWDIETGQ------QTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp C---CCSSCEEEEEE-------EETTEEEEEETTTEEEEEETTTTE------EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred c---ccccccccccc-------cccccccccccccccccccccccc------ccccccccceeEeeeccccccceeEEee
Confidence 1 11111111111 122344555555555544432211 1111222333444444455555566666
Q ss_pred CCceEEEEecccccccCCCCCCccceecCC-CCEEEEEEEecCCCCcEEEEEecCceeEEecccccccccccccceeeee
Q psy14505 708 DSGKAVRFNENSVRAMGRSARGVIGMRLEK-KQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKT 786 (1619)
Q Consensus 708 ~~G~~~~~~~~eIp~~~r~a~Gv~~i~L~~-~e~Iv~~~~~~~~~~~ll~~T~~G~~Kr~~l~e~~~~~R~~kG~~~ikl 786 (1619)
..|.+..+...+ |.....+.. ...|.++.. .+....++..+.+|.++...+...... ..+..
T Consensus 204 ~d~~v~i~d~~~---------~~~~~~~~~h~~~i~~v~~-~p~~~~l~s~s~d~~i~~~~~~~~~~~-------~~~~~ 266 (340)
T d1tbga_ 204 CDASAKLWDVRE---------GMCRQTFTGHESDINAICF-FPNGNAFATGSDDATCRLFDLRADQEL-------MTYSH 266 (340)
T ss_dssp TTTEEEEEETTT---------TEEEEEECCCSSCEEEEEE-CTTSSEEEEEETTSCEEEEETTTTEEE-------EEECC
T ss_pred cCceEEEEECCC---------CcEEEEEeCCCCCeEEEEE-CCCCCEEEEEeCCCeEEEEeecccccc-------ccccc
Confidence 778776665432 222223332 233544443 333566777788898887665433211 11212
Q ss_pred ccCCCeEEEEEEecCCcEEEEEECCCeEEEEecCc
Q psy14505 787 NKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSE 821 (1619)
Q Consensus 787 ~~~~d~Lv~~~~~~~~~~i~l~T~~g~~lrf~~~e 821 (1619)
......+..+........++..+.+|.+..++...
T Consensus 267 ~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~ 301 (340)
T d1tbga_ 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp TTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTT
T ss_pred ccccCceEEEEECCCCCEEEEEECCCEEEEEECCC
Confidence 22123455554444455667778888888887643
No 90
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.05 E-value=0.82 Score=46.54 Aligned_cols=71 Identities=13% Similarity=0.202 Sum_probs=40.4
Q ss_pred CeEEEEEcC-HHHHHHhchHHHHhcCCCCCHHHHHHHHHhhhhhcccC--CCCCCCCCCCceEEccCcccchhhhhhhhh
Q psy14505 992 FLKIFLTAD-IKQRTKRRYKQLMQKGFSVSMSDLLINLIKRDIRDKTR--NLSPLKCPEQAHLLNTSKMNINQVVNQILD 1068 (1619)
Q Consensus 992 ~~kifl~A~-~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r--~~~~l~~~~dal~Idts~l~ieevv~~I~~ 1068 (1619)
++.||+.++ .+++.+| |..++ ..+.+++.+.+.+ ...|..+ ....+ |.+++| . ++|++++.+.+
T Consensus 113 ~~~I~i~~~~~e~l~~R----L~~R~-~~~~e~i~~rl~~-~~~~~~~~~~~~~f----d~iI~N-~--dle~a~~~l~~ 179 (190)
T d1lvga_ 113 PIYIFVQPPSLDVLEQR----LRLRN-TETEESLAKRLAA-ARTDMESSKEPGLF----DLVIIN-D--DLDKAYATLKQ 179 (190)
T ss_dssp CEEEEEECSCHHHHHHH----HHHHT-CSCHHHHHHHHHH-HHHHTTGGGSTTTC----SEEEEC-S--SHHHHHHHHHH
T ss_pred ceEEEEecchHHHHHHH----Hhhcc-ccchHHHHHHHHH-HHHHHHhhhhcCCC----CEEEEC-c--CHHHHHHHHHH
Confidence 367887776 5666666 33444 3477788777764 3333332 12223 345444 3 57888888777
Q ss_pred hhhhhhh
Q psy14505 1069 CFATLFK 1075 (1619)
Q Consensus 1069 ~i~~ll~ 1075 (1619)
.+.+.++
T Consensus 180 iI~~~~~ 186 (190)
T d1lvga_ 180 ALSEEIK 186 (190)
T ss_dssp HTHHHHH
T ss_pred HHHHHHh
Confidence 6655444
No 91
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=88.26 E-value=0.16 Score=51.81 Aligned_cols=28 Identities=36% Similarity=0.412 Sum_probs=24.4
Q ss_pred ccEEEecCCcCCCCchhHHHHHHHhCCE
Q psy14505 859 IPVITIDGPTASGKGTVAQLVASKLGFH 886 (1619)
Q Consensus 859 ~~iIti~g~~gsGK~~~~~~la~~l~~~ 886 (1619)
.++|.|+|+.||||+|.++.|++.++..
T Consensus 22 ~~iIgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 22 RLVLGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp SEEEEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhccc
Confidence 4589999999999999999999877743
No 92
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=87.91 E-value=0.43 Score=52.65 Aligned_cols=37 Identities=24% Similarity=0.419 Sum_probs=30.9
Q ss_pred ccEEEecCCcCCCCchhHHHHHHHhC-------CEEechhhHHH
Q psy14505 859 IPVITIDGPTASGKGTVAQLVASKLG-------FHYLDSGALYR 895 (1619)
Q Consensus 859 ~~iIti~g~~gsGK~~~~~~la~~l~-------~~~~dtg~~yr 895 (1619)
.++|.|+|..|+||+|.++.|++.|. +..+.++..|.
T Consensus 80 P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~~ 123 (308)
T d1sq5a_ 80 PYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLH 123 (308)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGBC
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeeeEC
Confidence 46899999999999999999998874 45677777764
No 93
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=83.71 E-value=0.18 Score=51.33 Aligned_cols=28 Identities=32% Similarity=0.745 Sum_probs=22.5
Q ss_pred cEEEecCCcCCCCchhHHHHHHHh-CCEE
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKL-GFHY 887 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l-~~~~ 887 (1619)
.+|.+.|++|+||+|+.+.|.+++ ++.+
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~~~~~ 31 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIPNLHF 31 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSTTCEE
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCCCCeE
Confidence 356688999999999999998876 4443
No 94
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.69 E-value=1.2 Score=44.87 Aligned_cols=88 Identities=11% Similarity=0.089 Sum_probs=47.0
Q ss_pred cCCCeEEeccccCee----eecCCCeEEE-EEcCHHHHHHhchHHHHhcCCCCCHHHHHHHHHhhhhhcccCCCCCCCCC
Q psy14505 972 KFPGLVADGRDMGTT----VFPDAFLKIF-LTADIKQRTKRRYKQLMQKGFSVSMSDLLINLIKRDIRDKTRNLSPLKCP 1046 (1619)
Q Consensus 972 ~~~~~V~~GRd~~~~----v~p~a~~kif-l~A~~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~ 1046 (1619)
++..|++++..-+-- .++..++-|| +.+|.+++.+| |..+|. .+.+++.+.+... ..+.......+
T Consensus 91 ~g~~~i~~~~~~~~~~lk~~~~~~~~~i~~~~~~~e~l~~R----L~~Rg~-~~~~~I~~Rl~~~-~~e~~~~~~~~--- 161 (186)
T d1gkya_ 91 SGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKR----LEGRGT-ETEESINKRLSAA-QAELAYAETGA--- 161 (186)
T ss_dssp HTSEEEEECCHHHHHHHHTCGGGCCEEEEEECSCHHHHHHH----HHHHSC-SCHHHHHHHHHHH-HHHHHHHTTTC---
T ss_pred CCCeEEecchHHHHHHHHHhhcccceEEEecCCcHHHHHHH----HHhhcc-chhHHHHHHHHHH-HHHHHhhhhcC---
Confidence 455788877532211 1233344454 56667888888 344454 3777777666542 22222111111
Q ss_pred CCceEEccCcccchhhhhhhhhhhh
Q psy14505 1047 EQAHLLNTSKMNINQVVNQILDCFA 1071 (1619)
Q Consensus 1047 ~dal~Idts~l~ieevv~~I~~~i~ 1071 (1619)
-|++++| . ++|++++.+.+++.
T Consensus 162 fd~vI~N-~--dle~a~~~l~~iI~ 183 (186)
T d1gkya_ 162 HDKVIVN-D--DLDKAYKELKDFIF 183 (186)
T ss_dssp SSEEEEC-S--SHHHHHHHHHHHHH
T ss_pred CCEEEEC-c--CHHHHHHHHHHHHH
Confidence 2345555 3 68888888877653
No 95
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=82.82 E-value=0.33 Score=51.43 Aligned_cols=39 Identities=23% Similarity=0.347 Sum_probs=34.2
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEec-hhhHHHHHH
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLD-SGALYRLVT 898 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~d-tg~~yr~~~ 898 (1619)
.+|.+.|..||||+|+++.|++++|++++| .+.+.+.+.
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e~~g~~~i~~aD~i~~~l~ 41 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPIKDALA 41 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHSCEEECCTTHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhCCCeEEcccHHHHHHHH
Confidence 578899999999999999999999999999 567777554
No 96
>d1jjga_ b.40.4.5 (A:) Viral structural mimic of eIF2alpha {Myxoma virus, m156r [TaxId: 10273]}
Probab=79.71 E-value=1.6 Score=38.00 Aligned_cols=61 Identities=23% Similarity=0.303 Sum_probs=46.1
Q ss_pred ccCCCcEEEEEEEEEecCeEEEEeC---CEEEE-eeccccCccccCCCccccccCCEEEEEEEEeec
Q psy14505 1253 TLKEGCTVKGVVKNITDYGAFIDLG---GIDGL-LHITDIAWRRVKHPSEILTIGQDISTKILKYDQ 1315 (1619)
Q Consensus 1253 ~l~~G~iv~g~V~~v~~~G~~V~l~---gi~g~-l~~sels~~~~~~~~~~~~vG~~v~vrVl~vd~ 1315 (1619)
++.||++.+|.|. +.++-++|.|. |.+|+ +..-++..++..+.++.+ +|.+++++|+.+|.
T Consensus 29 ~~~~G~V~kGiVy-~rd~~fyV~L~dY~g~eail~dY~n~~~dr~~klkkkL-VGKTIkVqVIRvDk 93 (102)
T d1jjga_ 29 DLSPGSVHEGIVY-FKDGIFKVRLLGYEGHECILLDYLNYRQDTLDRLKERL-VGRVIKTRVVRADG 93 (102)
T ss_dssp CCCSSCEEEEEEE-EETTEEEEECTTTSSCEEEECTTCCSSCCCCCHHHHHH-TTCEEEEEEEEECS
T ss_pred ccCCCcEeeeEEE-EeCCEEEEEecCCCCceeeeeehhhhhHHHHHHHHHHh-cCceEEEEEEEecc
Confidence 5789999999987 45666778874 67887 455555555566666665 99999999999993
No 97
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=77.78 E-value=0.42 Score=47.54 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=30.4
Q ss_pred ccEEEecCCcCCCCchhHHHHHHHhCCEEechhh
Q psy14505 859 IPVITIDGPTASGKGTVAQLVASKLGFHYLDSGA 892 (1619)
Q Consensus 859 ~~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~ 892 (1619)
...|.+.|++|+||+|.++.||+++|++++....
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~ 40 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYG 40 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeeh
Confidence 4578899999999999999999999999998643
No 98
>d3d31a1 b.40.6.3 (A:230-348) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=77.56 E-value=16 Score=32.88 Aligned_cols=104 Identities=16% Similarity=0.133 Sum_probs=62.6
Q ss_pred cEEEEEEEEEecCeEEEEeCCEEEEeeccccCccccCCCccccccCCEEEEEEEEeecCCCeEEEeeeccccCCcccccc
Q psy14505 1258 CTVKGVVKNITDYGAFIDLGGIDGLLHITDIAWRRVKHPSEILTIGQDISTKILKYDQEKNRVSLGMKQLGIDPWIGLSF 1337 (1619)
Q Consensus 1258 ~iv~g~V~~v~~~G~~V~l~gi~g~l~~sels~~~~~~~~~~~~vG~~v~vrVl~vd~~~~~i~LSlK~~~~~~~~~~~~ 1337 (1619)
.++.|+|.+..+..+.+++++..-.++. .+.+|+.+.+ .+.|++ +.++....
T Consensus 3 N~l~g~v~~~~~~~~~v~~~~~~l~~~~-------------~~~~g~~v~~---~iRPE~--i~l~~~~~---------- 54 (119)
T d3d31a1 3 NVLKGRVISAEQGLLRIRVGEVVIDAAG-------------DMEVGDQVYA---FLRPEN--IALSKSST---------- 54 (119)
T ss_dssp EEEEEEEEEEETTEEEEEETTEEEEEES-------------SCCTTCEEEE---EECGGG--EEEESSCC----------
T ss_pred eEEEEEEEEecCCEEEEEECCEEEECCC-------------CCCCCCEEEE---EEchHH--cccccccc----------
Confidence 3689999999998899999987655442 1347887754 556654 44443211
Q ss_pred ccccceeEEEEEEEEcCCeEEEEE--cCC--EEEEEeccccCccccCCCccccccCCCEEEEEE
Q psy14505 1338 RYPRGTRLLGKVTNLTDYGAFVEI--EKG--IEGLVHISEMDWINKNVTPSKIVQLNDTVEIMI 1397 (1619)
Q Consensus 1338 ~l~~G~iv~g~V~~v~~~G~fV~l--~~g--v~GlV~~sels~~~~~~~~~~~~~vG~~V~vrV 1397 (1619)
.-.....+.|+|..+...|..+.+ ..| +...++.... -...+++|+.|.+.+
T Consensus 55 ~~~~~N~l~g~V~~~~~~G~~~~v~l~~g~~~~~~v~~~~~--------~~~~l~~G~~V~v~~ 110 (119)
T d3d31a1 55 QSSIRNSLQGRVTEAWVLGALVRVKVDCGVPLNVLITRRSA--------EEMELSPGVQIYARF 110 (119)
T ss_dssp CBSCSEEEEEEEEEEEECSSEEEEEEESSSEEEEEEETTHH--------HHSCCCTTCEEEEEE
T ss_pred ccccceEEEEEEEEEEECCCeEEEEEEeCCEEEEEEecCch--------hhcCcCCCCEEEEEE
Confidence 011234789999999888754433 222 2222321111 123467899998753
No 99
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.41 E-value=7.1 Score=38.50 Aligned_cols=35 Identities=23% Similarity=0.244 Sum_probs=30.6
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEechhhHH
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYLDSGALY 894 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~dtg~~y 894 (1619)
.+|-+.|.+||||+|.++.++..+++.+++.+.+-
T Consensus 15 ~liil~G~pGsGKST~a~~l~~~~~~~~i~~D~~~ 49 (172)
T d1yj5a2 15 EVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLG 49 (172)
T ss_dssp CEEEEECCTTSSHHHHHHHHTGGGTCEEEEHHHHC
T ss_pred EEEEEECCCCCCHHHHHHHHHHhcCCEEEchHHHH
Confidence 35666799999999999999999999999987654
No 100
>d1luza_ b.40.4.5 (A:) Viral structural mimic of eIF2alpha {Vaccinia virus [TaxId: 10245]}
Probab=75.99 E-value=2.4 Score=36.04 Aligned_cols=71 Identities=23% Similarity=0.401 Sum_probs=52.5
Q ss_pred CCCcEEEEEEEEEecCeEEEEeC---CEEEEee-ccccCccccCCCccccccCCEEEEEEEEeecCCCeEEEeeecc
Q psy14505 1255 KEGCTVKGVVKNITDYGAFIDLG---GIDGLLH-ITDIAWRRVKHPSEILTIGQDISTKILKYDQEKNRVSLGMKQL 1327 (1619)
Q Consensus 1255 ~~G~iv~g~V~~v~~~G~~V~l~---gi~g~l~-~sels~~~~~~~~~~~~vG~~v~vrVl~vd~~~~~i~LSlK~~ 1327 (1619)
.+|++.+|.|. +.++-++|.|. |.+|++- .-++.-++..+.++.+ +|.+++++|+.+|.-++-+.+.-|..
T Consensus 7 nigdVtkGiVy-~kd~~fyV~L~dY~g~ea~l~dy~~~~~d~~~klk~kL-VGKtIkvqVIR~d~lKGYIDVr~~~~ 81 (85)
T d1luza_ 7 NAGDVIKGRVY-EKDYALYIYLFDYPHFEAILAESVKMHMDRYVEYRDKL-VGKTVKVKVIRVDYTKGYIDVNYKRM 81 (85)
T ss_dssp CTTCEEEEEEE-EETTEEEEEETTCTTSEEEEGGGSSCCHHHHHHHHHHH-TTCEEEEEEEEEETTTTEEEEEEEEE
T ss_pred CCCceeeeEEE-EeCCEEEEEecCCCCceEEeeehhhhhhHHHHHHHHHh-cCceEEEEEEEEcceeeEEEehhhhh
Confidence 57999999987 45566678874 6777754 3333334455555555 99999999999999999999987653
No 101
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.42 E-value=56 Score=34.23 Aligned_cols=230 Identities=7% Similarity=-0.057 Sum_probs=118.4
Q ss_pred ccccCcceEEEEccCccEEeccCchhhhcccCCCCccccccCCC-CeEEEEEEeeCccEEEEEeeCceEEEEEcccCCCC
Q psy14505 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDE-DWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQG 615 (1619)
Q Consensus 537 ~li~~e~~~v~ls~~GyiKr~~~~~~~~~~r~g~g~~~~~~k~~-D~~~~~~~~~t~d~llifT~~Gkv~~i~v~elp~~ 615 (1619)
..-++...+++.+.+|.|+--++...... ....+... ..+.......+...++.-+..+.+.... +..
T Consensus 104 ~~s~dg~~l~s~~~dg~i~iwd~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~---~~~- 172 (337)
T d1gxra_ 104 KLLPDGCTLIVGGEASTLSIWDLAAPTPR-------IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD---LHN- 172 (337)
T ss_dssp EECTTSSEEEEEESSSEEEEEECCCC--E-------EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEE---TTT-
T ss_pred EEcCCCCEEEEeecccccccccccccccc-------ccccccccccccccccccccccccccccccccccccc---ccc-
Confidence 44567777888888998886544322111 11111111 2222222333334444445556554443 321
Q ss_pred CccCCCccceecccCCCCceEEEEEecCCCCCCCCCCcEEEEEeCCceEEEeeCCCCcCCCCCCceeeecCCCCeEEEEE
Q psy14505 616 SRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAA 695 (1619)
Q Consensus 616 ~~~~~G~~i~~ll~l~~~e~i~~i~~~~~~~~~~~~e~~~v~iT~~G~iKr~~~~~~~~~~r~G~~~~~lke~D~l~~~~ 695 (1619)
+....... .....+..+... ++...++..+.+|.++-..+...+ ....+.-.+.+..+.
T Consensus 173 -----~~~~~~~~--~~~~~v~~l~~s-------~~~~~~~~~~~d~~v~i~d~~~~~-------~~~~~~~~~~i~~l~ 231 (337)
T d1gxra_ 173 -----QTLVRQFQ--GHTDGASCIDIS-------NDGTKLWTGGLDNTVRSWDLREGR-------QLQQHDFTSQIFSLG 231 (337)
T ss_dssp -----TEEEEEEC--CCSSCEEEEEEC-------TTSSEEEEEETTSEEEEEETTTTE-------EEEEEECSSCEEEEE
T ss_pred -----cccccccc--cccccccccccc-------ccccccccccccccccccccccce-------eecccccccceEEEE
Confidence 22222222 123345444332 456788899999999887764422 222233345666666
Q ss_pred EecCCCeEEEEeCCceEEEEecccccccCCCCCCccceecCCCCEEEEEEEecCCCCcEEEEEecCceeEEecccccccc
Q psy14505 696 LTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHN 775 (1619)
Q Consensus 696 ~~~~~d~lll~T~~G~~~~~~~~eIp~~~r~a~Gv~~i~L~~~e~Iv~~~~~~~~~~~ll~~T~~G~~Kr~~l~e~~~~~ 775 (1619)
...+.+.++..+..|.+..+....- ...........|.++...++ ...++..+.+|.++.-.+..
T Consensus 232 ~~~~~~~l~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~i~~v~~s~~-g~~l~s~s~Dg~i~iwd~~~----- 296 (337)
T d1gxra_ 232 YCPTGEWLAVGMESSNVEVLHVNKP---------DKYQLHLHESCVLSLKFAYC-GKWFVSTGKDNLLNAWRTPY----- 296 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTSS---------CEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTT-----
T ss_pred Ecccccccceecccccccccccccc---------ccccccccccccceEEECCC-CCEEEEEeCCCeEEEEECCC-----
Confidence 5556667777788898887765321 11111222334555544333 45666777778776554321
Q ss_pred cccccceeeeeccCCCeEEEEEEecCCcEEEEEECCCeEEEEe
Q psy14505 776 RGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTR 818 (1619)
Q Consensus 776 R~~kG~~~ikl~~~~d~Lv~~~~~~~~~~i~l~T~~g~~lrf~ 818 (1619)
|.....+.. .+.+.++.....+..++..+.+|.+..++
T Consensus 297 ----~~~~~~~~~-~~~v~~~~~s~d~~~l~t~s~D~~I~vWd 334 (337)
T d1gxra_ 297 ----GASIFQSKE-SSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp ----CCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ----CCEEEEccC-CCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 334444443 45666655444344555566777765543
No 102
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=70.14 E-value=69 Score=33.41 Aligned_cols=241 Identities=10% Similarity=0.011 Sum_probs=111.2
Q ss_pred cccCcceEEEEccCccEEeccCchhhhcccCCCCccccccCCCCeEEEEEEeeCccEEEEEeeCceEEEEEcccCCCCCc
Q psy14505 538 LIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDEDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSR 617 (1619)
Q Consensus 538 li~~e~~~v~ls~~GyiKr~~~~~~~~~~r~g~g~~~~~~k~~D~~~~~~~~~t~d~llifT~~Gkv~~i~v~elp~~~~ 617 (1619)
.-++.+.+++.+.+|.|+--+...-. ......++.....+..+..+.....++....++...+.++++..
T Consensus 66 ~sp~g~~latg~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~--- 135 (311)
T d1nr0a1 66 TSPSGYYCASGDVHGNVRIWDTTQTT-------HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--- 135 (311)
T ss_dssp ECTTSSEEEEEETTSEEEEEESSSTT-------CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT---
T ss_pred EeCCCCeEeccccCceEeeeeeeccc-------cccccccccccCcccccccccccccccccccccccccccccccc---
Confidence 45566777777788877764433211 11111122212222223334444444444444332233344432
Q ss_pred cCCCccceecccCCCCceEEEEEecCCCCCCCCCCc-EEEEEeCCceEEEeeCCCCcCCCCCCceeeecCC-CCeEEEEE
Q psy14505 618 NSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNN-YVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSN-EDFLIGAA 695 (1619)
Q Consensus 618 ~~~G~~i~~ll~l~~~e~i~~i~~~~~~~~~~~~e~-~~v~iT~~G~iKr~~~~~~~~~~r~G~~~~~lke-~D~l~~~~ 695 (1619)
|.+..++- .....+..+.-. ++.+ .++..+.+|.++.-+..... ....++. ...+..+.
T Consensus 136 ---~~~~~~l~--~h~~~v~~v~~~-------~~~~~~l~sgs~d~~i~i~d~~~~~-------~~~~~~~~~~~i~~v~ 196 (311)
T d1nr0a1 136 ---GTSNGNLT--GQARAMNSVDFK-------PSRPFRIISGSDDNTVAIFEGPPFK-------FKSTFGEHTKFVHSVR 196 (311)
T ss_dssp ---CCBCBCCC--CCSSCEEEEEEC-------SSSSCEEEEEETTSCEEEEETTTBE-------EEEEECCCSSCEEEEE
T ss_pred ---cccccccc--cccccccccccc-------ccceeeecccccccccccccccccc-------cccccccccccccccc
Confidence 23333322 123345555322 3444 45667899999887665432 2233333 34455555
Q ss_pred EecCCCeEEEEeCCceEEEEecccccccCCCCCCcccee-cCCCCEEEEEEEecCCCCcEEEEEecCceeEEeccccccc
Q psy14505 696 LTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMR-LEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKH 774 (1619)
Q Consensus 696 ~~~~~d~lll~T~~G~~~~~~~~eIp~~~r~a~Gv~~i~-L~~~e~Iv~~~~~~~~~~~ll~~T~~G~~Kr~~l~e~~~~ 774 (1619)
...+...++..+.+|.+..+....-..... ....... ..-...|.++..-++ +.+++..+.+|.++.-.+....
T Consensus 197 ~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~--~~~~~~~~~~h~~~V~~~~~s~~-~~~l~tgs~Dg~v~iwd~~t~~-- 271 (311)
T d1nr0a1 197 YNPDGSLFASTGGDGTIVLYNGVDGTKTGV--FEDDSLKNVAHSGSVFGLTWSPD-GTKIASASADKTIKIWNVATLK-- 271 (311)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEE--CBCTTSSSCSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTE--
T ss_pred cCcccccccccccccccccccccccccccc--ccccccccccccccccccccCCC-CCEEEEEeCCCeEEEEECCCCc--
Confidence 444455566667788877776532110000 0000000 111234655543333 5667777778887765543221
Q ss_pred ccccccceeeeeccC-CCeEEEEEEecCCcEEEEEECCCeEEEEec
Q psy14505 775 NRGTKGIISIKTNKR-NGKVVAATLVNRYHEIMLITTGGILIRTRV 819 (1619)
Q Consensus 775 ~R~~kG~~~ikl~~~-~d~Lv~~~~~~~~~~i~l~T~~g~~lrf~~ 819 (1619)
-+..+..... ....+++. -.++.++.++.+|.+-.++.
T Consensus 272 -----~~~~l~~~~~~~~~~~~~~--~~~~~l~s~s~dG~i~~wd~ 310 (311)
T d1nr0a1 272 -----VEKTIPVGTRIEDQQLGII--WTKQALVSISANGFINFVNP 310 (311)
T ss_dssp -----EEEEEECCSSGGGCEEEEE--ECSSCEEEEETTCCEEEEET
T ss_pred -----EEEEEECCCCccceEEEEE--ecCCEEEEEECCCEEEEEeC
Confidence 1122222110 12233332 23456778888888776654
No 103
>d1wfqa_ b.40.4.5 (A:) Cold shock domain protein E1 (UNR) {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.53 E-value=11 Score=32.99 Aligned_cols=70 Identities=14% Similarity=0.192 Sum_probs=50.5
Q ss_pred cCCCCCeEEEEEEEEecCceEEEEecCCeEEEEEccccccccccCcCCCCEEEEEEEEEeCCCCEEEEeec
Q psy14505 1512 INDKGSLVNGIIKSIDTNKGAIIQLSNEVEGYLRISEEDNKHEKKLKIGENIDVLTVLIDHKTRYIQLSFK 1582 (1619)
Q Consensus 1512 ~~~~G~~v~g~V~~i~~~~G~~V~l~~gv~G~i~~~~~~~~~~~~~~~Gq~V~~~Vl~vd~~~k~i~lSlk 1582 (1619)
.-..+....|+|...+..||.+-.-..+-.-|+|.+.+.. ....+++||.|.+.|..=+...+-..+.++
T Consensus 12 ~~~~~~r~~G~I~~~~~gfGFI~~~~~~~dvF~H~s~~~~-~~~~l~~G~~VeF~v~~~~kg~k~~Av~V~ 81 (89)
T d1wfqa_ 12 GTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNG-NLQDLKVGDDVEFEVSSDRRTGKPIAVKLV 81 (89)
T ss_dssp SSSCCCEEEEEEEEECSSEEEEEETTTTEEEEEETTTCSS-CTTTCCTTCCEEEEEEECSSSCCEEEEEEE
T ss_pred CCCccceEEEEEEEecCccceEEeCCCCceEEEEeehhhc-cCCcccCCCEEEEEEEECCCCCceEEEEEE
Confidence 3446788899999998777766554446789999999853 346799999999998764444444444443
No 104
>d1luza_ b.40.4.5 (A:) Viral structural mimic of eIF2alpha {Vaccinia virus [TaxId: 10245]}
Probab=66.93 E-value=11 Score=31.90 Aligned_cols=70 Identities=19% Similarity=0.355 Sum_probs=52.8
Q ss_pred cCCCCCeEEEEEEEEecCceEEEEecC--CeEEEEEcccc-ccccc---cCcCCCCEEEEEEEEEeCCCCEEEEeecc
Q psy14505 1512 INDKGSLVNGIIKSIDTNKGAIIQLSN--EVEGYLRISEE-DNKHE---KKLKIGENIDVLTVLIDHKTRYIQLSFKK 1583 (1619)
Q Consensus 1512 ~~~~G~~v~g~V~~i~~~~G~~V~l~~--gv~G~i~~~~~-~~~~~---~~~~~Gq~V~~~Vl~vd~~~k~i~lSlk~ 1583 (1619)
-+.+|++.+|.|.-- ++-+.|.|.+ |.++++--..- -.+.. ..=-+|-+|+++|+.+|.-+..|.+.-|.
T Consensus 5 lPnigdVtkGiVy~k--d~~fyV~L~dY~g~ea~l~dy~~~~~d~~~klk~kLVGKtIkvqVIR~d~lKGYIDVr~~~ 80 (85)
T d1luza_ 5 LPNAGDVIKGRVYEK--DYALYIYLFDYPHFEAILAESVKMHMDRYVEYRDKLVGKTVKVKVIRVDYTKGYIDVNYKR 80 (85)
T ss_dssp CCCTTCEEEEEEEEE--TTEEEEEETTCTTSEEEEGGGSSCCHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEE
T ss_pred cCCCCceeeeEEEEe--CCEEEEEecCCCCceEEeeehhhhhhHHHHHHHHHhcCceEEEEEEEEcceeeEEEehhhh
Confidence 356899999999875 7779999988 79998765421 11111 22238999999999999999999998764
No 105
>d2axpa1 c.37.1.1 (A:2-165) Hypothetical protein YorR {Bacillus subtilis [TaxId: 1423]}
Probab=66.28 E-value=12 Score=33.19 Aligned_cols=33 Identities=24% Similarity=0.473 Sum_probs=27.1
Q ss_pred EEecCCcCCCCchhHHHHHHHhCCEEechhhHHH
Q psy14505 862 ITIDGPTASGKGTVAQLVASKLGFHYLDSGALYR 895 (1619)
Q Consensus 862 Iti~g~~gsGK~~~~~~la~~l~~~~~dtg~~yr 895 (1619)
|...|+-.+-|++++..+++.+.||.+-. .-|.
T Consensus 3 iilegpdccfkstvaaklskelkypiikg-ssfe 35 (164)
T d2axpa1 3 IILEGPDCCFKSTVAAKLSKELKYPIIKG-SSFE 35 (164)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHTCCEEEC-CCHH
T ss_pred EEEeCCchhhHHHHHHHHHhhhcCceecC-chhh
Confidence 45568889999999999999999999974 3344
No 106
>d1k3ra1 b.40.4.10 (A:93-163) Hypothetical protein MTH1 (MT0001), insert domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=64.56 E-value=8.3 Score=31.79 Aligned_cols=48 Identities=19% Similarity=0.282 Sum_probs=40.6
Q ss_pred ccCCCcEEEEEEEEEecCeEEEEeC-CEEEEeeccccCccccCCCccccccCCEEEEEEEEe
Q psy14505 1253 TLKEGCTVKGVVKNITDYGAFIDLG-GIDGLLHITDIAWRRVKHPSEILTIGQDISTKILKY 1313 (1619)
Q Consensus 1253 ~l~~G~iv~g~V~~v~~~G~~V~l~-gi~g~l~~sels~~~~~~~~~~~~vG~~v~vrVl~v 1313 (1619)
..++|++=+|.+.+..+.|++|++| +--+++-- .|++|+.+.+||.++
T Consensus 7 ~p~vGEiReG~~~rr~~~g~~vDiGlD~la~~k~-------------~~~~~~r~tfrIvs~ 55 (71)
T d1k3ra1 7 KPVTGEYRQGLTVKRVKKGTLVDIGADKLALCRE-------------KLTVNRIMSFRVVRL 55 (71)
T ss_dssp SCCTTCEEEEEEEEECSSSEEEESSSSCEEECSS-------------CCCSSCEEEEEEEEC
T ss_pred CCcccceeeEEEEEecCCcEEEEecCCceeeeec-------------ccccCcEEEEEEEEc
Confidence 4689999999999999999999998 66666541 267999999999887
No 107
>d1k3ra1 b.40.4.10 (A:93-163) Hypothetical protein MTH1 (MT0001), insert domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=63.62 E-value=7.7 Score=31.98 Aligned_cols=49 Identities=14% Similarity=0.222 Sum_probs=39.3
Q ss_pred ccccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCccccCCCccccccCCCEEEEEEEEe
Q psy14505 1338 RYPRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEI 1400 (1619)
Q Consensus 1338 ~l~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~i 1400 (1619)
..++|++=+|.+.+....|.||+++-+--+++ ...|++|+.+.+||.++
T Consensus 7 ~p~vGEiReG~~~rr~~~g~~vDiGlD~la~~--------------k~~~~~~~r~tfrIvs~ 55 (71)
T d1k3ra1 7 KPVTGEYRQGLTVKRVKKGTLVDIGADKLALC--------------REKLTVNRIMSFRVVRL 55 (71)
T ss_dssp SCCTTCEEEEEEEEECSSSEEEESSSSCEEEC--------------SSCCCSSCEEEEEEEEC
T ss_pred CCcccceeeEEEEEecCCcEEEEecCCceeee--------------ecccccCcEEEEEEEEc
Confidence 57899999999999999999999963222222 33678999999999987
No 108
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=63.33 E-value=23 Score=35.62 Aligned_cols=170 Identities=12% Similarity=0.094 Sum_probs=81.1
Q ss_pred cEEEecCCcCCCCchhHHHHHHHh---CCEEechhhHHHHHHHHHHHcCCCC--CcHHHHHHHHHccc-ceecCceEEeC
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKL---GFHYLDSGALYRLVTLSAINNNIQL--DNELELVILIKKLN-YNFLGKEVYLN 933 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l---~~~~~dtg~~yr~~~~~a~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~ 933 (1619)
.++.+.||+|+||+++.+.|.++. ++.+.=+ ...|.. ......|.+. -..+++.+...+-. +... .++
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p~~~~~~~is-~TTR~~-R~~E~~G~dY~Fvs~~~F~~~i~~g~flE~~----~~~ 76 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVS-HTTRQP-RPGEVHGEHYFFVNHDEFKEMISRDAFLEHA----EVF 76 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSCTTTEEECCC-EECSCC-CTTCCBTTTBEECCHHHHHHHHHTTCEEEEE----EET
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCCccCceEEEE-EeccCC-CccccccccceeecHHHHHHHhhhhhheeEE----EEC
Confidence 456788999999999999998875 3433210 001100 0011123332 23345555444322 2221 111
Q ss_pred CccccccccccccccccccccccHHHHHHHHHHHHhhhcCCCeEEeccccCe----eeecCCCeEEEEEcCHHHHHHhch
Q psy14505 934 GVNVTTLIRNEKVSNNASKIAKFKNIRKELFKIQVKFRKFPGLVADGRDMGT----TVFPDAFLKIFLTADIKQRTKRRY 1009 (1619)
Q Consensus 934 ~~~v~~~ir~~~~~~~~s~~a~~~~vr~~~~~~~r~~a~~~~~V~~GRd~~~----~v~p~a~~kifl~A~~e~Ra~Rr~ 1009 (1619)
|. ... .....++.. +.....||++.---|- -.+|++-+-+++..|.+++.+|
T Consensus 77 g~--------------~YG-t~~~~v~~~-------~~~g~~~ildid~~g~~~lk~~~~~~~~ifi~pps~~~l~~R-- 132 (205)
T d1s96a_ 77 GN--------------YYG-TSREAIEQV-------LATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRR-- 132 (205)
T ss_dssp TE--------------EEE-EEHHHHHHH-------HTTTCEEEEECCHHHHHHHHHHCTTCEEEEEECSSHHHHHHH--
T ss_pred Cc--------------eec-cccchHHHH-------HhcCCceeecCcHHHHHHHHhhhcccceeeeeccchHHHHHH--
Confidence 11 011 122234432 3455678887732221 1123332334455667778888
Q ss_pred HHHHhcCCCCCHHHHHHHHHhhhhhcccCCCCCCCCCCCceEEccCcccchhhhhhhhhhhh
Q psy14505 1010 KQLMQKGFSVSMSDLLINLIKRDIRDKTRNLSPLKCPEQAHLLNTSKMNINQVVNQILDCFA 1071 (1619)
Q Consensus 1010 ~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~~l~~~~dal~Idts~l~ieevv~~I~~~i~ 1071 (1619)
|..++. .+.+++...+.. ...+.... . .-|++++|. +++++++.+.+.+.
T Consensus 133 --L~~Rg~-~~~~~i~~Rl~~-a~~E~~~~-~----~fD~vIvNd---dl~~a~~el~~iI~ 182 (205)
T d1s96a_ 133 --LRGRGQ-DSEEVIAKRMAQ-AVAEMSHY-A----EYDYLIVND---DFDTALTDLKTIIR 182 (205)
T ss_dssp --HHTTSC-SCHHHHHHHHHH-HHHHHTTG-G----GSSEEEECS---SHHHHHHHHHHHHH
T ss_pred --HHhcCC-chHHHHHHHHHH-HHHHHHHH-h----CCCEEEECc---CHHHHHHHHHHHHH
Confidence 344443 455566554443 22222211 1 124555553 58888888877664
No 109
>d1jjga_ b.40.4.5 (A:) Viral structural mimic of eIF2alpha {Myxoma virus, m156r [TaxId: 10273]}
Probab=61.80 E-value=12 Score=32.38 Aligned_cols=61 Identities=18% Similarity=0.033 Sum_probs=43.5
Q ss_pred cccCCCCCeEEEEEEEEecCceEEEEecC--CeEEEEEccc-cccccccC---cCCCCEEEEEEEEEeC
Q psy14505 1510 VNINDKGSLVNGIIKSIDTNKGAIIQLSN--EVEGYLRISE-EDNKHEKK---LKIGENIDVLTVLIDH 1572 (1619)
Q Consensus 1510 ~~~~~~G~~v~g~V~~i~~~~G~~V~l~~--gv~G~i~~~~-~~~~~~~~---~~~Gq~V~~~Vl~vd~ 1572 (1619)
.-.+.+|++.+|.|.-- ++-++|.|.+ |.++++--.. +-.+.... =-+|-+|+++|+.+|.
T Consensus 27 ~~~~~~G~V~kGiVy~r--d~~fyV~L~dY~g~eail~dY~n~~~dr~~klkkkLVGKTIkVqVIRvDk 93 (102)
T d1jjga_ 27 AMDLSPGSVHEGIVYFK--DGIFKVRLLGYEGHECILLDYLNYRQDTLDRLKERLVGRVIKTRVVRADG 93 (102)
T ss_dssp CCCCCSSCEEEEEEEEE--TTEEEEECTTTSSCEEEECTTCCSSCCCCCHHHHHHTTCEEEEEEEEECS
T ss_pred ecccCCCcEeeeEEEEe--CCEEEEEecCCCCceeeeeehhhhhHHHHHHHHHHhcCceEEEEEEEecc
Confidence 34567999999999875 7778999988 7888865431 11111122 2289999999999993
No 110
>d1wfqa_ b.40.4.5 (A:) Cold shock domain protein E1 (UNR) {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.64 E-value=31 Score=29.89 Aligned_cols=67 Identities=18% Similarity=0.277 Sum_probs=44.8
Q ss_pred cccceeEEEEEEEEcC-CeEEEEEcC-CEEEEEeccccCccccCCCccccccCCCEEEEEEEEeecccceEEEeee
Q psy14505 1339 YPRGTRLLGKVTNLTD-YGAFVEIEK-GIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEINEERRRISLGMK 1412 (1619)
Q Consensus 1339 l~~G~iv~g~V~~v~~-~G~fV~l~~-gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~LSlK 1412 (1619)
-..+....|+|....+ || |++-.+ +-+-|+|.+++.. ....+++||.|+..|..-.+..+...+.++
T Consensus 13 ~~~~~r~~G~I~~~~~gfG-FI~~~~~~~dvF~H~s~~~~------~~~~l~~G~~VeF~v~~~~kg~k~~Av~V~ 81 (89)
T d1wfqa_ 13 TSAALRETGVIEKLLTSYG-FIQCSERQARLFFHCSQYNG------NLQDLKVGDDVEFEVSSDRRTGKPIAVKLV 81 (89)
T ss_dssp SSCCCEEEEEEEEECSSEE-EEEETTTTEEEEEETTTCSS------CTTTCCTTCCEEEEEEECSSSCCEEEEEEE
T ss_pred CCccceEEEEEEEecCccc-eEEeCCCCceEEEEeehhhc------cCCcccCCCEEEEEEEECCCCCceEEEEEE
Confidence 3456677899999865 34 555544 5789999999842 235678999999997654333334444443
No 111
>d1mjca_ b.40.4.5 (A:) Major cold shock protein {Escherichia coli [TaxId: 562]}
Probab=50.28 E-value=26 Score=28.90 Aligned_cols=52 Identities=19% Similarity=0.241 Sum_probs=37.7
Q ss_pred eEEEEEEEEe--cCceEEEEecCCeEEEEEccccccccccCcCCCCEEEEEEEE
Q psy14505 1518 LVNGIIKSID--TNKGAIIQLSNEVEGYLRISEEDNKHEKKLKIGENIDVLTVL 1569 (1619)
Q Consensus 1518 ~v~g~V~~i~--~~~G~~V~l~~gv~G~i~~~~~~~~~~~~~~~Gq~V~~~Vl~ 1569 (1619)
.++|+|+.-. ..||.+..-.++-.-|+|.+.+.......+.+||.|.+.+..
T Consensus 3 r~~G~Vk~f~~~kGfGFI~~d~g~~diFvH~s~l~~~~~~~L~~G~~V~f~~~~ 56 (69)
T d1mjca_ 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIES 56 (69)
T ss_dssp CEEEEEEEEETTTTEEEEEETTSCCCEEEEGGGBCCTTTCCCCTTCEEEEEEEC
T ss_pred CEEEEEEEEeCCCCEEEEEEcCCCccEEEEhHHhcccCCCcCCCCCEEEEEEEe
Confidence 3678887654 356665433335789999999976555779999999998754
No 112
>d1c9oa_ b.40.4.5 (A:) Major cold shock protein {Bacillus caldolyticus [TaxId: 1394]}
Probab=49.67 E-value=27 Score=28.49 Aligned_cols=49 Identities=16% Similarity=0.281 Sum_probs=36.8
Q ss_pred EEEEEEEe--cCceEEEEecCCeEEEEEccccccccccCcCCCCEEEEEEEE
Q psy14505 1520 NGIIKSID--TNKGAIIQLSNEVEGYLRISEEDNKHEKKLKIGENIDVLTVL 1569 (1619)
Q Consensus 1520 ~g~V~~i~--~~~G~~V~l~~gv~G~i~~~~~~~~~~~~~~~Gq~V~~~Vl~ 1569 (1619)
+|+|+.-. ..||.+ ..++|-.-|+|.+.+.......+.+||.|.+.+..
T Consensus 3 ~G~Vk~fn~~kGfGFI-~~d~g~DiF~H~s~l~~~~~~~L~~G~~V~f~~~~ 53 (66)
T d1c9oa_ 3 RGKVKWFNNEKGYGFI-EVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQ 53 (66)
T ss_dssp EEEEEEEETTTTEEEE-EETTEEEEEEEGGGBCSSSCCCCCTTCEEEEEEEE
T ss_pred CeEEEEEECCCCEEEE-EecCCceEEEEehhcccccCCcCCCCCEEEEEEEE
Confidence 57776654 356664 45667788999999976555789999999998764
No 113
>d1h95a_ b.40.4.5 (A:) Y-box protein 1 cold shock domain (YB1-CSD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.51 E-value=26 Score=29.70 Aligned_cols=56 Identities=20% Similarity=0.171 Sum_probs=38.9
Q ss_pred cEEEEEEEEEec---CeEEEEeC-CEEEEeeccccCccccCCCccccccCCEEEEEEEEe
Q psy14505 1258 CTVKGVVKNITD---YGAFIDLG-GIDGLLHITDIAWRRVKHPSEILTIGQDISTKILKY 1313 (1619)
Q Consensus 1258 ~iv~g~V~~v~~---~G~~V~l~-gi~g~l~~sels~~~~~~~~~~~~vG~~v~vrVl~v 1313 (1619)
..+.|+|+...+ +|.+..-+ +-+-|+|.+.+...-....-..+..||.|.+.+..-
T Consensus 7 ~r~~G~VKwfn~~KGfGFI~~ddg~~DvFvH~s~i~~~g~~~~~~~L~~G~~V~f~~~~~ 66 (79)
T d1h95a_ 7 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 66 (79)
T ss_dssp EEEEEEEEEEETTTTEEEEEEGGGTEEEEEEGGGBCSCCCSCCSCSCCSSCEEEEEEEEC
T ss_pred CcccEEEEEEcCCCCeEEEEECCCCccEEEEhhHcccCCCcceeeecCCCCEEEEEEEeC
Confidence 467899999864 45554333 689999999997543222233467899999987653
No 114
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=44.63 E-value=2.6 Score=42.65 Aligned_cols=29 Identities=24% Similarity=0.342 Sum_probs=24.1
Q ss_pred cEEEecCCcCCCCchhHHHHHHHhCCEEe
Q psy14505 860 PVITIDGPTASGKGTVAQLVASKLGFHYL 888 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~l~~~~~ 888 (1619)
.+|.+.|.+|+||+|.++.|++.+++..+
T Consensus 3 ~li~l~GlpgsGKSTla~~L~~~l~~~~~ 31 (213)
T d1bifa1 3 TLIVMVGLPARGKTYISKKLTRYLNFIGV 31 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHhcCC
Confidence 35777899999999999999998876543
No 115
>d1c9oa_ b.40.4.5 (A:) Major cold shock protein {Bacillus caldolyticus [TaxId: 1394]}
Probab=43.33 E-value=50 Score=26.74 Aligned_cols=50 Identities=26% Similarity=0.363 Sum_probs=35.5
Q ss_pred EEEEEEEcC-CeE-EEEEcCCEEEEEeccccCccccCCCccccccCCCEEEEEEEEe
Q psy14505 1346 LGKVTNLTD-YGA-FVEIEKGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEI 1400 (1619)
Q Consensus 1346 ~g~V~~v~~-~G~-fV~l~~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~i 1400 (1619)
.|+|+-..+ .|. |+...++-+-|+|.+.+... -...+.+||.|++.+..-
T Consensus 3 ~G~Vk~fn~~kGfGFI~~d~g~DiF~H~s~l~~~-----~~~~L~~G~~V~f~~~~~ 54 (66)
T d1c9oa_ 3 RGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGE-----GFKTLEEGQEVSFEIVQG 54 (66)
T ss_dssp EEEEEEEETTTTEEEEEETTEEEEEEEGGGBCSS-----SCCCCCTTCEEEEEEEEE
T ss_pred CeEEEEEECCCCEEEEEecCCceEEEEehhcccc-----cCCcCCCCCEEEEEEEEC
Confidence 588887743 343 46677788999999999531 123578999999987543
No 116
>d1ixra2 b.40.4.2 (A:1-62) DNA helicase RuvA subunit, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=40.71 E-value=13 Score=30.05 Aligned_cols=44 Identities=14% Similarity=0.027 Sum_probs=35.3
Q ss_pred eEEEEEEEEeccEEEEEeCC-CeEEEEecccccccCCCccccCCCEEEEEE
Q psy14505 1088 VISAEVIGLDRNFVIINADL-KSEAFIPIEEFKNDNGELEVKIGDFVSVAI 1137 (1619)
Q Consensus 1088 iv~G~V~~v~~~gv~V~lg~-~~~Gfi~~~e~~~~~~~~~~kvG~~v~~~V 1137 (1619)
-+.|+|.+++++.++|+.++ +.+-++|.+-+.. ++.|+.+...+
T Consensus 4 ~i~G~i~~~~~~~ivi~~~GvGY~v~v~~~~~~~------l~~g~~v~l~t 48 (62)
T d1ixra2 4 YLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQA------LEEGKEVGVHT 48 (62)
T ss_dssp EEEEEEEEECSSEEEEECSSEEEEEECCHHHHHH------CCTTSEEEEEE
T ss_pred EEEEEEEEEcCCEEEEEECCEEEEEEECHHHHhh------ccCCCEEEEEE
Confidence 47899999999999999977 7888888665532 46799887765
No 117
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.35 E-value=2e+02 Score=29.43 Aligned_cols=258 Identities=9% Similarity=0.016 Sum_probs=128.2
Q ss_pred ccccCcceEEEEccCccEEeccCchhhhcccCCCCccccccCCC-CeEEEEEEeeCccEEEEEeeCceEEEEEcccCCCC
Q psy14505 537 DLIASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKDE-DWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQG 615 (1619)
Q Consensus 537 ~li~~e~~~v~ls~~GyiKr~~~~~~~~~~r~g~g~~~~~~k~~-D~~~~~~~~~t~d~llifT~~Gkv~~i~v~elp~~ 615 (1619)
..-++...+++.+ +|.|+--++...... ........... +.+..+....+...|+.-+.+|.+.- +++...
T Consensus 58 ~fs~~g~~latg~-dg~V~iWd~~~~~~~----~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~i---wd~~~~ 129 (337)
T d1gxra_ 58 TISNPTRHVYTGG-KGCVKVWDISHPGNK----SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI---WDLAAP 129 (337)
T ss_dssp EECSSSSEEEEEC-BSEEEEEETTSTTCC----SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE---EECCCC
T ss_pred EECCCCCEEEEEE-CCEEEEEEccCCccc----ceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccc---cccccc
Confidence 3444555666655 677776444322111 01111122222 33444444445555655566776543 445432
Q ss_pred CccCCCccceecccCCCCceEEEEEecCCCCCCCCCCcEEEEEeCCceEEEeeCCCCcCCCCCCceeeecCCCCeEEEEE
Q psy14505 616 SRNSRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAA 695 (1619)
Q Consensus 616 ~~~~~G~~i~~ll~l~~~e~i~~i~~~~~~~~~~~~e~~~v~iT~~G~iKr~~~~~~~~~~r~G~~~~~lke~D~l~~~~ 695 (1619)
. +.....+- .....+..+... ++..+++..+.+|.++...+...... .......+.+..+.
T Consensus 130 ~----~~~~~~~~--~~~~~v~~~~~~-------~~~~~l~s~~~d~~i~~~~~~~~~~~------~~~~~~~~~v~~l~ 190 (337)
T d1gxra_ 130 T----PRIKAELT--SSAPACYALAIS-------PDSKVCFSCCSDGNIAVWDLHNQTLV------RQFQGHTDGASCID 190 (337)
T ss_dssp ------EEEEEEE--CSSSCEEEEEEC-------TTSSEEEEEETTSCEEEEETTTTEEE------EEECCCSSCEEEEE
T ss_pred c----cccccccc--cccccccccccc-------cccccccccccccccccccccccccc------cccccccccccccc
Confidence 1 22222221 122333333322 56678888999999998877543211 11112234555554
Q ss_pred EecCCCeEEEEeCCceEEEEecccccccCCCCCCccceecCCCCEEEEEEEecCCCCcEEEEEecCceeEEecccccccc
Q psy14505 696 LTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARGVIGMRLEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHN 775 (1619)
Q Consensus 696 ~~~~~d~lll~T~~G~~~~~~~~eIp~~~r~a~Gv~~i~L~~~e~Iv~~~~~~~~~~~ll~~T~~G~~Kr~~l~e~~~~~ 775 (1619)
.......++..+..|.+..+.... |..+-.+.-...|.++...++ ...++..+.+|.++...+..-
T Consensus 191 ~s~~~~~~~~~~~d~~v~i~d~~~---------~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~d~~i~i~d~~~~---- 256 (337)
T d1gxra_ 191 ISNDGTKLWTGGLDNTVRSWDLRE---------GRQLQQHDFTSQIFSLGYCPT-GEWLAVGMESSNVEVLHVNKP---- 256 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT---------TEEEEEEECSSCEEEEEECTT-SSEEEEEETTSCEEEEETTSS----
T ss_pred cccccccccccccccccccccccc---------ceeecccccccceEEEEEccc-ccccceecccccccccccccc----
Confidence 445556677777888877765532 222222233445655544333 566777788888877654311
Q ss_pred cccccceeeeeccCCCeEEEEEEecCCcEEEEEECCCeEEEEecCcccccCCCCCCeEEEEcCCCceEEEEEEee
Q psy14505 776 RGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRTRVSEIRKMGRSTQGVILITVENKSKLCGVQRLC 850 (1619)
Q Consensus 776 R~~kG~~~ikl~~~~d~Lv~~~~~~~~~~i~l~T~~g~~lrf~~~eI~~~gr~a~Gv~~i~L~~~d~v~~~~~~~ 850 (1619)
.. +......+.+-.+.....+..++..+.+|.+..++... |..+..+.....|.++...+
T Consensus 257 -----~~-~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~---------~~~~~~~~~~~~v~~~~~s~ 316 (337)
T d1gxra_ 257 -----DK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY---------GASIFQSKESSSVLSCDISV 316 (337)
T ss_dssp -----CE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT---------CCEEEEEECSSCEEEEEECT
T ss_pred -----cc-ccccccccccceEEECCCCCEEEEEeCCCeEEEEECCC---------CCEEEEccCCCCEEEEEEeC
Confidence 11 12222234455554444445566667777776666543 33344444555666665443
No 118
>d1ah9a_ b.40.4.5 (A:) Translational initiation factor 1, IF1 {Escherichia coli [TaxId: 562]}
Probab=38.53 E-value=12 Score=31.19 Aligned_cols=61 Identities=21% Similarity=0.171 Sum_probs=44.4
Q ss_pred eeEEEEEEEEcCCeE-EEEEcCCEEEEEeccccCccccCCCccccccCCCEEEEEEEEeecccceEE
Q psy14505 1343 TRLLGKVTNLTDYGA-FVEIEKGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEINEERRRIS 1408 (1619)
Q Consensus 1343 ~iv~g~V~~v~~~G~-fV~l~~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id~e~~ri~ 1408 (1619)
..+.|+|+...+.|. -|.+.+|..-+.+++== ...-.-.+.+||.|.+.+-..|.++++|.
T Consensus 6 ie~~G~V~e~lg~~~f~V~l~ng~~~~a~i~Gk-----mrk~ri~i~~GD~V~Vel~pyd~~kgrIi 67 (71)
T d1ah9a_ 6 IEMQGTVLETLPNTMFRVELENGHVVTAHISGK-----MRKNYIRILTGDKVTVELTPYDLSKGRIV 67 (71)
T ss_dssp EECCEEEEEECSSSEEEEEETTSCEEEEEECSS-----GGGTTCCCCTTCEECCEECSSCTTEEEEC
T ss_pred EEEEEEEEEEcCCCEEEEEeCCCCEEEEEccch-----hheeEEEecCCCEEEEEECccCCCcEEEE
Confidence 356799999998875 57888888877776522 11112357789999999988888777764
No 119
>d1yvca1 b.40.4.12 (A:1-69) Hypothetical protein MMP0076 {Methanococcus maripaludis [TaxId: 39152]}
Probab=38.20 E-value=29 Score=28.53 Aligned_cols=48 Identities=27% Similarity=0.459 Sum_probs=37.9
Q ss_pred ccCCCEEEEEEEEEEeCeEEE-EeCCEEEEEcCcccccCCCCCCCCCCCCeEEEEEEEEec
Q psy14505 1167 MESGEIITGTINGKVKGGLTV-LTNGLKAFLPGSLVDIRPVKDTTPFEGKTMDFKVIKLDR 1226 (1619)
Q Consensus 1167 l~~G~~v~g~V~~v~~~Gl~V-~~gg~~gflp~s~~~~~~~~~~~~~vG~~v~~~Vl~vd~ 1226 (1619)
++.|+.++.+|.+....|.=+ .++|..-|+|.. ++|+.+.++|..+.+
T Consensus 13 vk~g~~~~v~I~~l~~~G~Giar~~g~vvfV~~a------------lPGe~V~v~I~k~kk 61 (69)
T d1yvca1 13 VEAGKEYEVTIEDMGKGGDGIARIDGFVVFVPNA------------EKGSVINVKVTAVKE 61 (69)
T ss_dssp SCTTCEEEEECCEECTTSCEEEEETTEEEEETTC------------CTTCEEEEEEEEECS
T ss_pred CCCCCEEEEEEEECCCCCcEEEEECCEEEEeCCC------------CCCCEEEEEEEEecC
Confidence 567999999999987666544 778999999832 479999999988754
No 120
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=38.02 E-value=2.4e+02 Score=29.69 Aligned_cols=62 Identities=18% Similarity=0.196 Sum_probs=42.8
Q ss_pred CCCcEEEEEeCCceEEEeeCCCCcCCCCCCceeeecCCCCeEEEEEEecCCCeEEEEeCCceEEEEec
Q psy14505 650 PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNE 717 (1619)
Q Consensus 650 ~~e~~~v~iT~~G~iKr~~~~~~~~~~r~G~~~~~lke~D~l~~~~~~~~~d~lll~T~~G~~~~~~~ 717 (1619)
+...++.++|+.||+--.+++.-.. ..+.-=.+|.+.-...-+...-++.+..+|+++.+.+
T Consensus 265 ~kygiiyviTK~G~i~lyDleTgt~------i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl~vsv 326 (327)
T d1utca2 265 EKHDVVFLITKYGYIHLYDLETGTC------IYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 326 (327)
T ss_dssp TTTTEEEEEETTSEEEEEETTTCCE------EEEEECCSSCEEEEEEETTTTEEEEEETTSEEEEEEE
T ss_pred ccCCEEEEEecCcEEEEEEcccccE------EEEeecCCCceEEeccCCCCceEEEECCCCeEEEEEe
Confidence 4678999999999999988864211 1111112455554444455678999999999998865
No 121
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment (residues 410-1202) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.56 E-value=33 Score=41.66 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14505 352 YYFILHRKEVIKRRTIFELRKAREYAHILEGLT 384 (1619)
Q Consensus 352 ~~f~~~R~~~~~rR~~~~l~k~~~r~~ileg~~ 384 (1619)
.+++..|+++..++++++|.+++.|+|++++++
T Consensus 584 le~y~kRk~~~l~~l~~el~~l~~k~rFI~~vi 616 (760)
T d1bjta_ 584 LEYYQKRKDHMSERLQWEVEKYSFQVKFIKMII 616 (760)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhHHHHHHHhh
Confidence 468899999999999999999999999999975
No 122
>d1h95a_ b.40.4.5 (A:) Y-box protein 1 cold shock domain (YB1-CSD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.86 E-value=42 Score=28.30 Aligned_cols=57 Identities=25% Similarity=0.263 Sum_probs=37.7
Q ss_pred eeEEEEEEEEcC-CeE-EEEE-cCCEEEEEeccccCccccCCCccccccCCCEEEEEEEEe
Q psy14505 1343 TRLLGKVTNLTD-YGA-FVEI-EKGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEI 1400 (1619)
Q Consensus 1343 ~iv~g~V~~v~~-~G~-fV~l-~~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~i 1400 (1619)
..+.|+|+--.+ .|. |+.- .++-+-|+|.+.+.... .......+.+||.|...+..-
T Consensus 7 ~r~~G~VKwfn~~KGfGFI~~ddg~~DvFvH~s~i~~~g-~~~~~~~L~~G~~V~f~~~~~ 66 (79)
T d1h95a_ 7 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNN-PRKYLRSVGDGETVEFDVVEG 66 (79)
T ss_dssp EEEEEEEEEEETTTTEEEEEEGGGTEEEEEEGGGBCSCC-CSCCSCSCCSSCEEEEEEEEC
T ss_pred CcccEEEEEEcCCCCeEEEEECCCCccEEEEhhHcccCC-CcceeeecCCCCEEEEEEEeC
Confidence 467899987643 343 4554 44688999999995311 112234678899999987643
No 123
>d1yeza1 b.40.4.12 (A:1-68) Hypothetical protein MM1357 {Methanosarcina mazei [TaxId: 2209]}
Probab=34.31 E-value=42 Score=27.38 Aligned_cols=48 Identities=27% Similarity=0.436 Sum_probs=37.9
Q ss_pred ccCCCEEEEEEEEEEeCeEEE-EeCCEEEEEcCcccccCCCCCCCCCCCCeEEEEEEEEec
Q psy14505 1167 MESGEIITGTINGKVKGGLTV-LTNGLKAFLPGSLVDIRPVKDTTPFEGKTMDFKVIKLDR 1226 (1619)
Q Consensus 1167 l~~G~~v~g~V~~v~~~Gl~V-~~gg~~gflp~s~~~~~~~~~~~~~vG~~v~~~Vl~vd~ 1226 (1619)
++.|+.++.+|.+....|.=+ ..+|..-|+|.. +.|+.+.++|..+.+
T Consensus 11 v~~g~~~~l~I~~l~~~G~Gi~~~~g~vvfV~ga------------lpGe~v~v~i~k~kk 59 (68)
T d1yeza1 11 VEEGEVYDVTIQDIARQGDGIARIEGFVIFVPGT------------KVGDEVRIKVERVLP 59 (68)
T ss_dssp CCTTEEEEEECCEEETTTEEEEEETTEEEEEESC------------CTTCEEEEEEEEECS
T ss_pred cCCCCEEEEEEEECCCCCcEEEEECCEEEEeCCC------------CCCCEEEEEEEEEeC
Confidence 567899999999987766544 778999999832 479999999988753
No 124
>d3d31a1 b.40.6.3 (A:230-348) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=34.28 E-value=1.4e+02 Score=25.92 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=61.0
Q ss_pred EEEEEEEEEEeCeEEEEeCCEEEEEcCcccccCCCCCCCCCCCCeEEEEEEEEecCCCeEEeecchhhhhhhhHHHHHHH
Q psy14505 1172 IITGTINGKVKGGLTVLTNGLKAFLPGSLVDIRPVKDTTPFEGKTMDFKVIKLDRKRNNVVLSHRAVIEESMGEERQKLI 1251 (1619)
Q Consensus 1172 ~v~g~V~~v~~~Gl~V~~gg~~gflp~s~~~~~~~~~~~~~vG~~v~~~Vl~vd~~~~~i~LS~k~~~~~~~~~~~~~~~ 1251 (1619)
.+.|+|.+..++.+.+.+++..-..|.. ...|+.+.+. +.|+. +.++....
T Consensus 4 ~l~g~v~~~~~~~~~v~~~~~~l~~~~~-----------~~~g~~v~~~---iRPE~--i~l~~~~~------------- 54 (119)
T d3d31a1 4 VLKGRVISAEQGLLRIRVGEVVIDAAGD-----------MEVGDQVYAF---LRPEN--IALSKSST------------- 54 (119)
T ss_dssp EEEEEEEEEETTEEEEEETTEEEEEESS-----------CCTTCEEEEE---ECGGG--EEEESSCC-------------
T ss_pred EEEEEEEEecCCEEEEEECCEEEECCCC-----------CCCCCEEEEE---EchHH--cccccccc-------------
Confidence 6789999988888888888877666521 1258876554 44543 44543211
Q ss_pred hccCCCcEEEEEEEEEecCeEEEEe----C-CEEEEeeccccCccccCCCccccccCCEEEEE
Q psy14505 1252 ETLKEGCTVKGVVKNITDYGAFIDL----G-GIDGLLHITDIAWRRVKHPSEILTIGQDISTK 1309 (1619)
Q Consensus 1252 ~~l~~G~iv~g~V~~v~~~G~~V~l----~-gi~g~l~~sels~~~~~~~~~~~~vG~~v~vr 1309 (1619)
.-.....+.|+|..+...|..+.+ + .....++..... ...+++|+++.+.
T Consensus 55 -~~~~~N~l~g~V~~~~~~G~~~~v~l~~g~~~~~~v~~~~~~-------~~~l~~G~~V~v~ 109 (119)
T d3d31a1 55 -QSSIRNSLQGRVTEAWVLGALVRVKVDCGVPLNVLITRRSAE-------EMELSPGVQIYAR 109 (119)
T ss_dssp -CBSCSEEEEEEEEEEEECSSEEEEEEESSSEEEEEEETTHHH-------HSCCCTTCEEEEE
T ss_pred -ccccceEEEEEEEEEEECCCeEEEEEEeCCEEEEEEecCchh-------hcCcCCCCEEEEE
Confidence 012234789999999888755443 3 234444422211 1126789999874
No 125
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=33.67 E-value=50 Score=29.48 Aligned_cols=23 Identities=22% Similarity=0.287 Sum_probs=15.7
Q ss_pred HHHHHcCCCHHHHHHHHHhhcCCCC
Q psy14505 394 IQIIRSTSTPQEAKNKIIESTWNLP 418 (1619)
Q Consensus 394 i~iir~s~~~~~a~~~L~~~~~~~~ 418 (1619)
|+.||+ +++..++.|..++++.+
T Consensus 4 ik~ir~--n~e~v~~~l~~R~~~~~ 26 (110)
T d1seta1 4 LKRLRQ--EPEVFHRAIREKGVALD 26 (110)
T ss_dssp HHHHHH--CHHHHHHHHHHTTCCCC
T ss_pred HHHHHh--CHHHHHHHHHHcCCccC
Confidence 456665 67777778877776654
No 126
>d1g6pa_ b.40.4.5 (A:) Major cold shock protein {Thermotoga maritima [TaxId: 2336]}
Probab=33.54 E-value=28 Score=28.42 Aligned_cols=49 Identities=20% Similarity=0.216 Sum_probs=35.0
Q ss_pred EEEEEEEe--cCceEEEEecCCeEEEEEccccccccccCcCCCCEEEEEEEE
Q psy14505 1520 NGIIKSID--TNKGAIIQLSNEVEGYLRISEEDNKHEKKLKIGENIDVLTVL 1569 (1619)
Q Consensus 1520 ~g~V~~i~--~~~G~~V~l~~gv~G~i~~~~~~~~~~~~~~~Gq~V~~~Vl~ 1569 (1619)
+|+|..-. ..||.+.. ++|-.-|+|.+.+.......+.+||.|.+.+..
T Consensus 2 ~G~Vk~f~~~kGfGFI~~-~~g~diFvH~s~l~~~g~~~l~~G~~V~f~~~~ 52 (66)
T d1g6pa_ 2 RGKVKWFDSKKGYGFITK-DEGGDVFVHWSAIEMEGFKTLKEGQVVEFEIQE 52 (66)
T ss_dssp CEEEEEEETTTTEEEEEE-TTSCBCBBCSSSSCCSSCCCCCSSSEEEEEEEC
T ss_pred eEEEEEEeCCCCeeEEEe-cCCceEEEEhHHhcccCCCcCCCCCEEEEEEEE
Confidence 46776543 35666554 556588999999865555679999999998753
No 127
>d1cuka3 b.40.4.2 (A:1-64) DNA helicase RuvA subunit, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.36 E-value=30 Score=28.03 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=36.5
Q ss_pred eEEEEEEEEeccEEEEEeCC-CeEEEEecccccccCCCccccCCCEEEEEEEE
Q psy14505 1088 VISAEVIGLDRNFVIINADL-KSEAFIPIEEFKNDNGELEVKIGDFVSVAIES 1139 (1619)
Q Consensus 1088 iv~G~V~~v~~~gv~V~lg~-~~~Gfi~~~e~~~~~~~~~~kvG~~v~~~V~~ 1139 (1619)
-+.|+|.+++++.++|+.++ +.+-++|.+.+..- ...|+.+...+--
T Consensus 4 ~l~G~l~~~~~~~ivi~v~GvGY~v~v~~~~~~~l-----~~~g~~v~l~t~~ 51 (64)
T d1cuka3 4 RLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-----PEAGQEAIVFTHF 51 (64)
T ss_dssp EEEEEEEEEETTEEEEEETTEEEEEECCHHHHTTC-----CCTTSEEEEEEEE
T ss_pred EEEEEEEEEcCCEEEEEECCEEEEEEEChHHHhhc-----cCCCCEEEEEEEE
Confidence 47999999999999999987 78888886655431 2578988877643
No 128
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=33.19 E-value=2.7e+02 Score=29.28 Aligned_cols=73 Identities=14% Similarity=0.156 Sum_probs=48.1
Q ss_pred CCEEEEEEEecCCCCcEEEEEecCceeEEecccccccccccccceeeeeccCCCeEEEEEEecCCcEEEEEECCCeEEEE
Q psy14505 738 KQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLITTGGILIRT 817 (1619)
Q Consensus 738 ~e~Iv~~~~~~~~~~~ll~~T~~G~~Kr~~l~e~~~~~R~~kG~~~ikl~~~~d~Lv~~~~~~~~~~i~l~T~~g~~lrf 817 (1619)
+|--+++.+.+- .+-++++|+.|++--..+.. |..++.-+=..|.+-.+..-+...-++.++.+|+++.+
T Consensus 255 ~DFPvamqvs~k-ygiiyviTK~G~i~lyDleT---------gt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl~v 324 (327)
T d1utca2 255 NDFPVAMQISEK-HDVVFLITKYGYIHLYDLET---------GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSV 324 (327)
T ss_dssp TCCEEEEEEETT-TTEEEEEETTSEEEEEETTT---------CCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEEEE
T ss_pred CCcEEEEEeecc-CCEEEEEecCcEEEEEEccc---------ccEEEEeecCCCceEEeccCCCCceEEEECCCCeEEEE
Confidence 788998887765 46788999999987665432 33333322113443333344455789999999999988
Q ss_pred ecC
Q psy14505 818 RVS 820 (1619)
Q Consensus 818 ~~~ 820 (1619)
.++
T Consensus 325 svd 327 (327)
T d1utca2 325 CVE 327 (327)
T ss_dssp EEC
T ss_pred EeC
Confidence 754
No 129
>d1mjca_ b.40.4.5 (A:) Major cold shock protein {Escherichia coli [TaxId: 562]}
Probab=32.55 E-value=64 Score=26.30 Aligned_cols=50 Identities=24% Similarity=0.304 Sum_probs=35.2
Q ss_pred EEEEEEEEEec---CeEEEEeC-CEEEEeeccccCccccCCCccccccCCEEEEEEEE
Q psy14505 1259 TVKGVVKNITD---YGAFIDLG-GIDGLLHITDIAWRRVKHPSEILTIGQDISTKILK 1312 (1619)
Q Consensus 1259 iv~g~V~~v~~---~G~~V~l~-gi~g~l~~sels~~~~~~~~~~~~vG~~v~vrVl~ 1312 (1619)
.++|+|+...+ +|.+..-+ +-+-|+|++.+..... ..+.+|+.|.+.+..
T Consensus 3 r~~G~Vk~f~~~kGfGFI~~d~g~~diFvH~s~l~~~~~----~~L~~G~~V~f~~~~ 56 (69)
T d1mjca_ 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGY----KSLDEGQKVSFTIES 56 (69)
T ss_dssp CEEEEEEEEETTTTEEEEEETTSCCCEEEEGGGBCCTTT----CCCCTTCEEEEEEEC
T ss_pred CEEEEEEEEeCCCCEEEEEEcCCCccEEEEhHHhcccCC----CcCCCCCEEEEEEEe
Confidence 37899998863 46555444 5789999999964322 226789999997643
No 130
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.47 E-value=3e+02 Score=28.16 Aligned_cols=245 Identities=11% Similarity=0.018 Sum_probs=114.5
Q ss_pred cCcceEEEEccCccEEeccCchhhhcccCCCCccccccCC-CCeEEEEEEeeCccEEEEEeeCceEEEEEcccCCCCCcc
Q psy14505 540 ASQDMVITLSNLGYIKSQPISEYRAQKRGGRGKKAMMTKD-EDWINQLFIANTHDYILCFSNYGRLYWLKVWQIPQGSRN 618 (1619)
Q Consensus 540 ~~e~~~v~ls~~GyiKr~~~~~~~~~~r~g~g~~~~~~k~-~D~~~~~~~~~t~d~llifT~~Gkv~~i~v~elp~~~~~ 618 (1619)
++...+++.+.+|.|+-.....-+.. ..... .+.+..+........++.-+..|.+.... +..
T Consensus 131 ~~~~~l~s~~~dg~v~i~~~~~~~~~---------~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d---~~~---- 194 (388)
T d1erja_ 131 PDGKFLATGAEDRLIRIWDIENRKIV---------MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD---LRT---- 194 (388)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEE---------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE---TTT----
T ss_pred CCCCcceecccccccccccccccccc---------cccccccccccccccccccccccccccceeeeeee---ccc----
Confidence 35567778889998887554332111 11121 22333333444445555556666655443 221
Q ss_pred CCCccceecccCCCCceEEEEEecCCCCCCCCCCcEEEEEeCCceEEEeeCCCCcCCCCCCceeee-cCCCCeEEEEEEe
Q psy14505 619 SRGKPIINMFSLKNKEKITVILPLSNNKRDFPKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVN-LSNEDFLIGAALT 697 (1619)
Q Consensus 619 ~~G~~i~~ll~l~~~e~i~~i~~~~~~~~~~~~e~~~v~iT~~G~iKr~~~~~~~~~~r~G~~~~~-lke~D~l~~~~~~ 697 (1619)
+....... .......+... -.+..+++..+.+|.++-..........+-...... ..-.+.+..+...
T Consensus 195 --~~~~~~~~---~~~~~~~~~~~------~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 263 (388)
T d1erja_ 195 --GQCSLTLS---IEDGVTTVAVS------PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT 263 (388)
T ss_dssp --TEEEEEEE---CSSCEEEEEEC------STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC
T ss_pred --cccccccc---ccccccccccc------CCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEEC
Confidence 11112111 12222233222 135577888899999987766432211100000000 0112455555555
Q ss_pred cCCCeEEEEeCCceEEEEecccccccCC---CCCCcccee-cCCCCEEEEEEEecCCCCcEEEEEecCceeEEecccccc
Q psy14505 698 DGSYDIMLFSDSGKAVRFNENSVRAMGR---SARGVIGMR-LEKKQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTK 773 (1619)
Q Consensus 698 ~~~d~lll~T~~G~~~~~~~~eIp~~~r---~a~Gv~~i~-L~~~e~Iv~~~~~~~~~~~ll~~T~~G~~Kr~~l~e~~~ 773 (1619)
.....++..+.+|.+..+....-..... ...+..... ......|..+...++ ..+++..+.+|.++.-.+..
T Consensus 264 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~sg~~dg~i~vwd~~~--- 339 (388)
T d1erja_ 264 RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKS--- 339 (388)
T ss_dssp TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGG-GCEEEEEETTSEEEEEETTT---
T ss_pred CCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCC-CCEEEEEeCCCEEEEEECCC---
Confidence 5556677777888877666533221110 011212211 223345555554443 56677788889887665421
Q ss_pred cccccccceeeeeccCCCeEEEEEEec-----CCcE-EEEEECCCeEEEEecCc
Q psy14505 774 HNRGTKGIISIKTNKRNGKVVAATLVN-----RYHE-IMLITTGGILIRTRVSE 821 (1619)
Q Consensus 774 ~~R~~kG~~~ikl~~~~d~Lv~~~~~~-----~~~~-i~l~T~~g~~lrf~~~e 821 (1619)
|.....+....+.+.++.... ++.. ++-.+.+|.+......+
T Consensus 340 ------~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~k 387 (388)
T d1erja_ 340 ------GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387 (388)
T ss_dssp ------CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ------CcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeeee
Confidence 334444443345566555432 2333 44456677766555543
No 131
>d2vnud2 b.40.4.5 (D:911-998) Exosome complex exonuclease RRP44 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=29.28 E-value=34 Score=29.63 Aligned_cols=56 Identities=21% Similarity=0.335 Sum_probs=37.0
Q ss_pred EEEEEEEEecceEEEeeCC-CeEEEEeCCCCCC-------CCCc---c------ccccCCCCCCEEEEEEEEe
Q psy14505 1432 IKGIIKSITDFGIFIGLDG-NIDGLIHLSDLSW-------TDPG---E------EIIRNFKKGDEIEAIILSI 1487 (1619)
Q Consensus 1432 v~G~V~~i~~~GvfV~~~~-~v~Glv~~sels~-------~~~~---~------~~~~~f~vGq~V~~~Vl~v 1487 (1619)
=.|+|.+|...|+.|-++. |+.|.|...+... ++.. . +-.-.|.+=|.|+++|.++
T Consensus 4 EegyV~~Vr~NGivVfVPkyGiEG~v~l~~~~~~~~~~~~De~~~~l~~~~~~~~~~~~~~vFD~V~V~is~v 76 (88)
T d2vnud2 4 ETGYVIKVFNNGIVVLVPKFGVEGLIRLDNLTEDPNSAAFDEVEYKLTFVPTNSDKPRDVYVFDKVEVQVRSV 76 (88)
T ss_dssp EEEEEEEEETTEEEEEETTTTEEEEEEHHHHCSCGGGCEEETTTTEEEECCTTCSSCEEEETTCEEEEEEC--
T ss_pred eEEEEEEEecccEEEEEeccceeEEEEEeccCCCCcceEEcchheEEEEecccCCCcEEEEecceEEEEEEEE
Confidence 4799999999999999976 9999998865431 0000 0 0112455667888888766
No 132
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=28.76 E-value=8.8 Score=38.14 Aligned_cols=31 Identities=23% Similarity=0.100 Sum_probs=26.7
Q ss_pred cccEEEecCCcCCCCchhHHHHHHHhCCEEe
Q psy14505 858 YIPVITIDGPTASGKGTVAQLVASKLGFHYL 888 (1619)
Q Consensus 858 ~~~iIti~g~~gsGK~~~~~~la~~l~~~~~ 888 (1619)
..++|.+.|..|+||+|.++.|++.++-..+
T Consensus 8 kp~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 8 QPFTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp CCEEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 3468999999999999999999999976554
No 133
>d1fr3a_ b.40.6.1 (A:) Molybdate/tungstate binding protein MOP {Sporomusa ovata [TaxId: 2378]}
Probab=25.91 E-value=39 Score=27.38 Aligned_cols=49 Identities=18% Similarity=0.274 Sum_probs=32.9
Q ss_pred CCeEEEEEEEEeccE----EEEEeCC-CeEEEEecccccccCCCccccCCCEEEEEEE
Q psy14505 1086 GEVISAEVIGLDRNF----VIINADL-KSEAFIPIEEFKNDNGELEVKIGDFVSVAIE 1138 (1619)
Q Consensus 1086 G~iv~G~V~~v~~~g----v~V~lg~-~~~Gfi~~~e~~~~~~~~~~kvG~~v~~~V~ 1138 (1619)
-=.+.|+|.++.+++ +.+++|+ .+.+.|...-+.+ ..+++|+.|.+.+.
T Consensus 6 rN~l~g~V~~I~~~~~~~~V~l~~~g~~l~a~IT~~s~~~----L~L~~G~~V~a~iK 59 (67)
T d1fr3a_ 6 RNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVAD----LDLVPGDKVTALVK 59 (67)
T ss_dssp CEEEEEEEEEEEECSSEEEEEEEETTEEEEEEEEHHHHHH----HTCCTTCEEEEEEC
T ss_pred ccEEEEEEEEEEECCCeEEEEEEECCcEEEEEcCHHHHHh----cCCCCCCEEEEEEE
Confidence 346899999999876 4455543 3556665544432 45899999998773
No 134
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=25.73 E-value=3e+02 Score=26.98 Aligned_cols=150 Identities=9% Similarity=-0.027 Sum_probs=76.1
Q ss_pred CCCcEEEEEeCCceEEEeeCCCCcCCCCCCceeeecCCCCeEEEEEEecCCCeEEEEeCCceEEEEecccccccCCCCCC
Q psy14505 650 PKNNYVFMSTSLGIVKKTLLSNFSNPRKSGIIAVNLSNEDFLIGAALTDGSYDIMLFSDSGKAVRFNENSVRAMGRSARG 729 (1619)
Q Consensus 650 ~~e~~~v~iT~~G~iKr~~~~~~~~~~r~G~~~~~lke~D~l~~~~~~~~~d~lll~T~~G~~~~~~~~eIp~~~r~a~G 729 (1619)
++..++++.+.+|.+.-..++.-.. .........+.+..+........++..+..|.+..+....-.....
T Consensus 146 ~~~~~l~~g~~dg~i~~~d~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~---- 216 (299)
T d1nr0a2 146 NDKQFVAVGGQDSKVHVYKLSGASV-----SEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH---- 216 (299)
T ss_dssp TTSCEEEEEETTSEEEEEEEETTEE-----EEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESC----
T ss_pred ccccccccccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccc----
Confidence 4566778888889888766532111 0111222345566655555556677778889888876643111110
Q ss_pred ccceecCC-CCEEEEEEEecCCCCcEEEEEecCceeEEecccccccccccccceeeeeccCCCeEEEEEEecCCcEEEEE
Q psy14505 730 VIGMRLEK-KQKVIALLVSNNQKQSVLTATENGYGKRTLIKEYTKHNRGTKGIISIKTNKRNGKVVAATLVNRYHEIMLI 808 (1619)
Q Consensus 730 v~~i~L~~-~e~Iv~~~~~~~~~~~ll~~T~~G~~Kr~~l~e~~~~~R~~kG~~~ikl~~~~d~Lv~~~~~~~~~~i~l~ 808 (1619)
...+.. ...|.++.. .+...+++..+.+|.++.-.+.... ..............+.+....++..++-.
T Consensus 217 --~~~~~~h~~~v~~l~~-s~~~~~l~sgs~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~l~s~ 286 (299)
T d1nr0a2 217 --TNSWTFHTAKVACVSW-SPDNVRLATGSLDNSVIVWNMNKPS-------DHPIIIKGAHAMSSVNSVIWLNETTIVSA 286 (299)
T ss_dssp --CCCCCCCSSCEEEEEE-CTTSSEEEEEETTSCEEEEETTCTT-------SCCEEETTSSTTSCEEEEEEEETTEEEEE
T ss_pred --cccccccccccccccc-cccccceEEEcCCCEEEEEECCCCC-------cceEEEecCCCCCcEEEEEECCCCEEEEE
Confidence 011211 234555443 3335667777888988776553321 11122221112233443333344566666
Q ss_pred ECCCeEEEEe
Q psy14505 809 TTGGILIRTR 818 (1619)
Q Consensus 809 T~~g~~lrf~ 818 (1619)
+.+|.+-..+
T Consensus 287 s~D~~i~iWd 296 (299)
T d1nr0a2 287 GQDSNIKFWN 296 (299)
T ss_dssp ETTSCEEEEE
T ss_pred eCCCEEEEEe
Confidence 6666654444
No 135
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=25.57 E-value=13 Score=38.93 Aligned_cols=30 Identities=27% Similarity=0.566 Sum_probs=26.6
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEech
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLDS 890 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~dt 890 (1619)
.+-+.|++|+||++.++.+|..+|++|+.-
T Consensus 42 ~vLL~GppGtGKT~la~alA~~~~~~~~~i 71 (246)
T d1d2na_ 42 SVLLEGPPHSGKTALAAKIAEESNFPFIKI 71 (246)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEECcCCCCHHHHHHHHhhccccccccc
Confidence 466779999999999999999999998864
No 136
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=24.97 E-value=14 Score=37.86 Aligned_cols=28 Identities=32% Similarity=0.498 Sum_probs=25.2
Q ss_pred EEecCCcCCCCchhHHHHHHHhCCEEec
Q psy14505 862 ITIDGPTASGKGTVAQLVASKLGFHYLD 889 (1619)
Q Consensus 862 Iti~g~~gsGK~~~~~~la~~l~~~~~d 889 (1619)
+-+.||+|+||.+.++.+|+.++++++.
T Consensus 38 ~L~~GPpGtGKT~lA~~la~~~~~~~~~ 65 (238)
T d1in4a2 38 VLLAGPPGLGKTTLAHIIASELQTNIHV 65 (238)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHTCCEEE
T ss_pred EEEECCCCCcHHHHHHHHHhccCCCccc
Confidence 4467999999999999999999999885
No 137
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=24.70 E-value=14 Score=38.65 Aligned_cols=29 Identities=24% Similarity=0.479 Sum_probs=26.1
Q ss_pred EEecCCcCCCCchhHHHHHHHhCCEEech
Q psy14505 862 ITIDGPTASGKGTVAQLVASKLGFHYLDS 890 (1619)
Q Consensus 862 Iti~g~~gsGK~~~~~~la~~l~~~~~dt 890 (1619)
+-..|++|+||++.++.+|..+|++++.-
T Consensus 45 iLl~GppGtGKT~la~aia~~~~~~~~~i 73 (247)
T d1ixza_ 45 VLLVGPPGVGKTHLARAVAGEARVPFITA 73 (247)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTTCCEEEE
T ss_pred EEEecCCCCChhHHHHHHHHHcCCCEEEE
Confidence 56679999999999999999999999764
No 138
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.45 E-value=17 Score=37.27 Aligned_cols=29 Identities=41% Similarity=0.689 Sum_probs=25.6
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEec
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLD 889 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~d 889 (1619)
.+-+.|++|+||++.++.+|+.+++.++.
T Consensus 54 ~lll~GPpG~GKTt~a~~la~~~~~~~~~ 82 (253)
T d1sxja2 54 AAMLYGPPGIGKTTAAHLVAQELGYDILE 82 (253)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTCEEEE
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhhhhc
Confidence 45667999999999999999999998873
No 139
>d2vnud2 b.40.4.5 (D:911-998) Exosome complex exonuclease RRP44 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=24.43 E-value=87 Score=26.89 Aligned_cols=29 Identities=24% Similarity=0.527 Sum_probs=25.8
Q ss_pred EEEEEEEecCceEEEEecC-CeEEEEEcccc
Q psy14505 1520 NGIIKSIDTNKGAIIQLSN-EVEGYLRISEE 1549 (1619)
Q Consensus 1520 ~g~V~~i~~~~G~~V~l~~-gv~G~i~~~~~ 1549 (1619)
.|+|..|. ++|+.|.+|. |++|.+.....
T Consensus 5 egyV~~Vr-~NGivVfVPkyGiEG~v~l~~~ 34 (88)
T d2vnud2 5 TGYVIKVF-NNGIVVLVPKFGVEGLIRLDNL 34 (88)
T ss_dssp EEEEEEEE-TTEEEEEETTTTEEEEEEHHHH
T ss_pred EEEEEEEe-cccEEEEEeccceeEEEEEecc
Confidence 69999997 9999999999 99999987543
No 140
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=23.77 E-value=15 Score=38.13 Aligned_cols=32 Identities=16% Similarity=0.294 Sum_probs=25.2
Q ss_pred EEEecCCcCCCCchhHHHHHHHhC--CEEechhh
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLG--FHYLDSGA 892 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~--~~~~dtg~ 892 (1619)
.|...|++|+||++.++.+|..++ +..+++..
T Consensus 34 ~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~ 67 (273)
T d1gvnb_ 34 AFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDT 67 (273)
T ss_dssp EEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhhcceEEEecHH
Confidence 466779999999999999999884 45566533
No 141
>d1yvca1 b.40.4.12 (A:1-69) Hypothetical protein MMP0076 {Methanococcus maripaludis [TaxId: 39152]}
Probab=23.73 E-value=74 Score=25.91 Aligned_cols=48 Identities=15% Similarity=0.151 Sum_probs=25.7
Q ss_pred CCCCCeEEEEEEEEecCceEEEEecCCeEEEEEccccccccccCcCCCCEEEEEEEEEe
Q psy14505 1513 NDKGSLVNGIIKSIDTNKGAIIQLSNEVEGYLRISEEDNKHEKKLKIGENIDVLTVLID 1571 (1619)
Q Consensus 1513 ~~~G~~v~g~V~~i~~~~G~~V~l~~gv~G~i~~~~~~~~~~~~~~~Gq~V~~~Vl~vd 1571 (1619)
+++|+.++.+|.++. ..|-=|--.+|..-|++- .-+||.|.++|+.+.
T Consensus 13 vk~g~~~~v~I~~l~-~~G~Giar~~g~vvfV~~----------alPGe~V~v~I~k~k 60 (69)
T d1yvca1 13 VEAGKEYEVTIEDMG-KGGDGIARIDGFVVFVPN----------AEKGSVINVKVTAVK 60 (69)
T ss_dssp SCTTCEEEEECCEEC-TTSCEEEEETTEEEEETT----------CCTTCEEEEEEEEEC
T ss_pred CCCCCEEEEEEEECC-CCCcEEEEECCEEEEeCC----------CCCCCEEEEEEEEec
Confidence 356777777776663 444322222343333332 337777777777664
No 142
>d1bvsa3 b.40.4.2 (A:1-63) DNA helicase RuvA subunit, N-terminal domain {Mycobacterium leprae [TaxId: 1769]}
Probab=23.71 E-value=11 Score=30.66 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=33.7
Q ss_pred eEEEEEEEEeccEEEEEeCC-CeEEEEecccccccCCCccccCCCEEEEEE
Q psy14505 1088 VISAEVIGLDRNFVIINADL-KSEAFIPIEEFKNDNGELEVKIGDFVSVAI 1137 (1619)
Q Consensus 1088 iv~G~V~~v~~~gv~V~lg~-~~~Gfi~~~e~~~~~~~~~~kvG~~v~~~V 1137 (1619)
-+.|+|.+++++.+++++++ +.+-++|.+.+.. +.+|+.+...+
T Consensus 4 ~i~G~i~~~~~~~ivi~v~GvGY~v~v~~~~~~~------l~~g~~v~l~t 48 (63)
T d1bvsa3 4 SVRGEVLEVALDHAVIEAAGIGYRVNATPSALAT------LNQGSQARLVT 48 (63)
T ss_dssp EECEEEEEECSSCEEEEETTEEECCBCCHHHHTT------CCSSCEECCCE
T ss_pred EEEEEEEEECCCEEEEEECCEEEEEEeCHHHHHH------CCCCCEEEEEE
Confidence 37899999999999999987 6666777655533 46788887655
No 143
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=23.54 E-value=15 Score=34.89 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=20.3
Q ss_pred cEEEecCCcCCCCchhHHHHHHH
Q psy14505 860 PVITIDGPTASGKGTVAQLVASK 882 (1619)
Q Consensus 860 ~iIti~g~~gsGK~~~~~~la~~ 882 (1619)
.++.+.|++||||+|.++.++++
T Consensus 3 Pvi~itG~~GSGKTTL~~~L~~~ 25 (170)
T d1np6a_ 3 PLLAFAAWSGTGKTTLLKKLIPA 25 (170)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHHH
Confidence 46888899999999999999865
No 144
>d1yeza1 b.40.4.12 (A:1-68) Hypothetical protein MM1357 {Methanosarcina mazei [TaxId: 2209]}
Probab=22.02 E-value=1.1e+02 Score=24.60 Aligned_cols=49 Identities=14% Similarity=0.139 Sum_probs=32.7
Q ss_pred ccccceeEEEEEEEEcCCeEEEEEcCCEEEEEeccccCccccCCCccccccCCCEEEEEEEEee
Q psy14505 1338 RYPRGTRLLGKVTNLTDYGAFVEIEKGIEGLVHISEMDWINKNVTPSKIVQLNDTVEIMILEIN 1401 (1619)
Q Consensus 1338 ~l~~G~iv~g~V~~v~~~G~fV~l~~gv~GlV~~sels~~~~~~~~~~~~~vG~~V~vrVl~id 1401 (1619)
.+++|+.++.+|.++...|-=|--.++..-|||-. -+|+.|.++|..+.
T Consensus 10 pv~~g~~~~l~I~~l~~~G~Gi~~~~g~vvfV~ga---------------lpGe~v~v~i~k~k 58 (68)
T d1yeza1 10 PVEEGEVYDVTIQDIARQGDGIARIEGFVIFVPGT---------------KVGDEVRIKVERVL 58 (68)
T ss_dssp SCCTTEEEEEECCEEETTTEEEEEETTEEEEEESC---------------CTTCEEEEEEEEEC
T ss_pred CcCCCCEEEEEEEECCCCCcEEEEECCEEEEeCCC---------------CCCCEEEEEEEEEe
Confidence 36778888888888877664332225666676522 27888888887764
No 145
>d1ah9a_ b.40.4.5 (A:) Translational initiation factor 1, IF1 {Escherichia coli [TaxId: 562]}
Probab=21.74 E-value=39 Score=27.99 Aligned_cols=62 Identities=18% Similarity=0.093 Sum_probs=43.0
Q ss_pred CeEEEEEEEEecCceEEEEecCCeEEEEEccccccccccCcCCCCEEEEEEEEEeCCCCEEE
Q psy14505 1517 SLVNGIIKSIDTNKGAIIQLSNEVEGYLRISEEDNKHEKKLKIGENIDVLTVLIDHKTRYIQ 1578 (1619)
Q Consensus 1517 ~~v~g~V~~i~~~~G~~V~l~~gv~G~i~~~~~~~~~~~~~~~Gq~V~~~Vl~vd~~~k~i~ 1578 (1619)
..+.|+|+....+.-+-|.++||..-+++.+---...--.+.+||.|.+.+-..|.++.+|.
T Consensus 6 ie~~G~V~e~lg~~~f~V~l~ng~~~~a~i~Gkmrk~ri~i~~GD~V~Vel~pyd~~kgrIi 67 (71)
T d1ah9a_ 6 IEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIV 67 (71)
T ss_dssp EECCEEEEEECSSSEEEEEETTSCEEEEEECSSGGGTTCCCCTTCEECCEECSSCTTEEEEC
T ss_pred EEEEEEEEEEcCCCEEEEEeCCCCEEEEEccchhheeEEEecCCCEEEEEECccCCCcEEEE
Confidence 45679999997555567899998766666542111112458899999998888887766653
No 146
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.55 E-value=20 Score=37.61 Aligned_cols=30 Identities=20% Similarity=0.380 Sum_probs=27.4
Q ss_pred EEEecCCcCCCCchhHHHHHHHhCCEEech
Q psy14505 861 VITIDGPTASGKGTVAQLVASKLGFHYLDS 890 (1619)
Q Consensus 861 iIti~g~~gsGK~~~~~~la~~l~~~~~dt 890 (1619)
-|-..|++|+||++.++.+|..+|++|+..
T Consensus 43 giLL~Gp~GtGKT~l~~ala~~~~~~~~~~ 72 (265)
T d1r7ra3 43 GVLFYGPPGCGKTLLAKAIANECQANFISI 72 (265)
T ss_dssp EEEEBCCTTSSHHHHHHHHHHHTTCEEEEE
T ss_pred eEEEECCCCCcchhHHHHHHHHhCCcEEEE
Confidence 466789999999999999999999999886
No 147
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=21.20 E-value=18 Score=37.92 Aligned_cols=28 Identities=21% Similarity=0.483 Sum_probs=25.1
Q ss_pred EEecCCcCCCCchhHHHHHHHhCCEEec
Q psy14505 862 ITIDGPTASGKGTVAQLVASKLGFHYLD 889 (1619)
Q Consensus 862 Iti~g~~gsGK~~~~~~la~~l~~~~~d 889 (1619)
+-.-|++|+||++.++.+|..+|++++.
T Consensus 48 iLL~GppGtGKT~la~~iA~~~~~~~~~ 75 (256)
T d1lv7a_ 48 VLMVGPPGTGKTLLAKAIAGEAKVPFFT 75 (256)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHTCCEEE
T ss_pred EEeeCCCCCCccHHHHHHHHHcCCCEEE
Confidence 5567999999999999999999999965
No 148
>d1h9ma2 b.40.6.2 (A:74-141) Cytoplasmic molybdate-binding protein ModG {Azotobacter vinelandii [TaxId: 354]}
Probab=20.64 E-value=62 Score=26.18 Aligned_cols=47 Identities=17% Similarity=0.258 Sum_probs=33.6
Q ss_pred eEEEEEEEEeccE----EEEEeCC--CeEEEEecccccccCCCccccCCCEEEEEEE
Q psy14505 1088 VISAEVIGLDRNF----VIINADL--KSEAFIPIEEFKNDNGELEVKIGDFVSVAIE 1138 (1619)
Q Consensus 1088 iv~G~V~~v~~~g----v~V~lg~--~~~Gfi~~~e~~~~~~~~~~kvG~~v~~~V~ 1138 (1619)
.+.|+|.++++++ +.++++. .+.+.+....+.. ..+++|+.+.+.+.
T Consensus 7 ~l~g~V~~I~~~~~~~~V~l~~~~g~~l~a~IT~~s~~~----L~L~~G~~V~a~iK 59 (68)
T d1h9ma2 7 ILTGTVKTIETGAVNAEVTLALQGGTEITSMVTKEAVAE----LGLKPGASASAVIK 59 (68)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTSCEEEEEEEHHHHHH----TTCCTTCEEEEEEC
T ss_pred EEEEEEEEEEECCCcEEEEEEeCCCCEEEEEeCHHHHhh----CCCCCCCEEEEEEE
Confidence 5889999999765 6677743 3667776555432 35899999998874
No 149
>d1g6pa_ b.40.4.5 (A:) Major cold shock protein {Thermotoga maritima [TaxId: 2336]}
Probab=20.28 E-value=59 Score=26.31 Aligned_cols=48 Identities=27% Similarity=0.347 Sum_probs=33.7
Q ss_pred EEEEEEEec---CeEEEEeCCEEEEeeccccCccccCCCccccccCCEEEEEEEE
Q psy14505 1261 KGVVKNITD---YGAFIDLGGIDGLLHITDIAWRRVKHPSEILTIGQDISTKILK 1312 (1619)
Q Consensus 1261 ~g~V~~v~~---~G~~V~l~gi~g~l~~sels~~~~~~~~~~~~vG~~v~vrVl~ 1312 (1619)
+|+|+...+ +|.+..-+|-+-|+|.+.+...-. ..+.+|+.|.+.+..
T Consensus 2 ~G~Vk~f~~~kGfGFI~~~~g~diFvH~s~l~~~g~----~~l~~G~~V~f~~~~ 52 (66)
T d1g6pa_ 2 RGKVKWFDSKKGYGFITKDEGGDVFVHWSAIEMEGF----KTLKEGQVVEFEIQE 52 (66)
T ss_dssp CEEEEEEETTTTEEEEEETTSCBCBBCSSSSCCSSC----CCCCSSSEEEEEEEC
T ss_pred eEEEEEEeCCCCeeEEEecCCceEEEEhHHhcccCC----CcCCCCCEEEEEEEE
Confidence 688998854 466555446689999999864322 236799999997643
No 150
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=20.22 E-value=20 Score=36.67 Aligned_cols=29 Identities=31% Similarity=0.526 Sum_probs=25.9
Q ss_pred EEecCCcCCCCchhHHHHHHHhCCEEech
Q psy14505 862 ITIDGPTASGKGTVAQLVASKLGFHYLDS 890 (1619)
Q Consensus 862 Iti~g~~gsGK~~~~~~la~~l~~~~~dt 890 (1619)
+-..|++|+||.+.++.+|+.+++++...
T Consensus 38 ~Ll~GPpG~GKTtla~~la~~~~~~~~~~ 66 (239)
T d1ixsb2 38 LLLFGPPGLGKTTLAHVIAHELGVNLRVT 66 (239)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHTCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCeEec
Confidence 45679999999999999999999998775
Done!